Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349710 | KEH33050.1 | 99.372 | 478 | 3 | 0 | 1 | 478 | 21 | 498 | 0.0 | 969 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349710 | sp|Q42586|UMPS_ARATH | 77.263 | 475 | 106 | 2 | 5 | 478 | 2 | 475 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349710 | A0A072V4E2 | 99.372 | 478 | 3 | 0 | 1 | 478 | 21 | 498 | 0.0 | 969 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa0349710 | 0.868673 | 5.483754e-66 | -8.615850e-47 |
| Msa0008110 | Msa0349710 | 0.832276 | 1.037008e-55 | -8.615850e-47 |
| Msa0018160 | Msa0349710 | 0.804108 | 2.530952e-49 | -8.615850e-47 |
| Msa0025580 | Msa0349710 | 0.800321 | 1.522782e-48 | -8.615850e-47 |
| Msa0028420 | Msa0349710 | 0.839437 | 1.585606e-57 | -8.615850e-47 |
| Msa0032920 | Msa0349710 | -0.802644 | 5.087477e-49 | -8.615850e-47 |
| Msa0032960 | Msa0349710 | -0.804589 | 2.009126e-49 | -8.615850e-47 |
| Msa0036870 | Msa0349710 | 0.846049 | 2.772077e-59 | -8.615850e-47 |
| Msa0039790 | Msa0349710 | 0.814732 | 1.326136e-51 | -8.615850e-47 |
| Msa0043230 | Msa0349710 | 0.871818 | 5.115941e-67 | -8.615850e-47 |
| Msa0046650 | Msa0349710 | 0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa0057420 | Msa0349710 | 0.861749 | 8.242162e-64 | -8.615850e-47 |
| Msa0071880 | Msa0349710 | 0.802254 | 6.121867e-49 | -8.615850e-47 |
| Msa0074350 | Msa0349710 | 0.837978 | 3.776673e-57 | -8.615850e-47 |
| Msa0074510 | Msa0349710 | 0.837713 | 4.419613e-57 | -8.615850e-47 |
| Msa0090400 | Msa0349710 | 0.873533 | 1.366112e-67 | -8.615850e-47 |
| Msa0092790 | Msa0349710 | 0.801328 | 9.482365e-49 | -8.615850e-47 |
| Msa0095900 | Msa0349710 | 0.851038 | 1.151334e-60 | -8.615850e-47 |
| Msa0117480 | Msa0349710 | 0.808056 | 3.736451e-50 | -8.615850e-47 |
| Msa0136650 | Msa0349710 | 0.844315 | 8.159274e-59 | -8.615850e-47 |
| Msa0137130 | Msa0349710 | 0.851369 | 9.282850e-61 | -8.615850e-47 |
| Msa0137880 | Msa0349710 | 0.885450 | 8.048163e-72 | -8.615850e-47 |
| Msa0146260 | Msa0349710 | 0.803455 | 3.457078e-49 | -8.615850e-47 |
| Msa0149370 | Msa0349710 | 0.830484 | 2.862177e-55 | -8.615850e-47 |
| Msa0174790 | Msa0349710 | 0.807603 | 4.663435e-50 | -8.615850e-47 |
| Msa0180650 | Msa0349710 | 0.811801 | 5.838688e-51 | -8.615850e-47 |
| Msa0180930 | Msa0349710 | 0.819567 | 1.085305e-52 | -8.615850e-47 |
| Msa0182240 | Msa0349710 | 0.807596 | 4.678312e-50 | -8.615850e-47 |
| Msa0182320 | Msa0349710 | 0.862399 | 5.208544e-64 | -8.615850e-47 |
| Msa0213280 | Msa0349710 | 0.801088 | 1.061652e-48 | -8.615850e-47 |
| Msa0214720 | Msa0349710 | 0.806850 | 6.733680e-50 | -8.615850e-47 |
| Msa0222560 | Msa0349710 | 0.801460 | 8.909020e-49 | -8.615850e-47 |
| Msa0225460 | Msa0349710 | 0.827890 | 1.218320e-54 | -8.615850e-47 |
| Msa0225680 | Msa0349710 | 0.839025 | 2.027733e-57 | -8.615850e-47 |
| Msa0229230 | Msa0349710 | 0.807624 | 4.614874e-50 | -8.615850e-47 |
| Msa0253700 | Msa0349710 | 0.800811 | 1.209714e-48 | -8.615850e-47 |
| Msa0255090 | Msa0349710 | 0.863848 | 1.857562e-64 | -8.615850e-47 |
| Msa0259380 | Msa0349710 | 0.861535 | 9.584595e-64 | -8.615850e-47 |
| Msa0267110 | Msa0349710 | 0.875098 | 4.025323e-68 | -8.615850e-47 |
| Msa0292330 | Msa0349710 | 0.850343 | 1.806134e-60 | -8.615850e-47 |
| Msa0292400 | Msa0349710 | 0.824863 | 6.408005e-54 | -8.615850e-47 |
| Msa0294160 | Msa0349710 | 0.836020 | 1.195098e-56 | -8.615850e-47 |
| Msa0298500 | Msa0349710 | 0.808071 | 3.708536e-50 | -8.615850e-47 |
| Msa0318700 | Msa0349710 | 0.846665 | 1.883274e-59 | -8.615850e-47 |
| Msa0321920 | Msa0349710 | 0.837038 | 6.580652e-57 | -8.615850e-47 |
| Msa0349710 | Msa0379770 | 0.832400 | 9.658473e-56 | -8.615850e-47 |
| Msa0349710 | Msa0380620 | 0.840218 | 9.927500e-58 | -8.615850e-47 |
| Msa0349710 | Msa0386850 | 0.800237 | 1.583322e-48 | -8.615850e-47 |
| Msa0349710 | Msa0390970 | 0.809327 | 1.998791e-50 | -8.615850e-47 |
| Msa0349710 | Msa0397150 | 0.807654 | 4.548539e-50 | -8.615850e-47 |
| Msa0349710 | Msa0417880 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0349710 | Msa0419700 | 0.840982 | 6.261606e-58 | -8.615850e-47 |
| Msa0349710 | Msa0428150 | 0.873989 | 9.586641e-68 | -8.615850e-47 |
| Msa0349710 | Msa0428590 | 0.801810 | 7.552544e-49 | -8.615850e-47 |
| Msa0349710 | Msa0430260 | 0.844754 | 6.213934e-59 | -8.615850e-47 |
| Msa0349710 | Msa0435210 | 0.809167 | 2.163007e-50 | -8.615850e-47 |
| Msa0349710 | Msa0442830 | 0.848133 | 7.440190e-60 | -8.615850e-47 |
| Msa0349710 | Msa0444070 | 0.981112 | 8.388260e-152 | -8.615850e-47 |
| Msa0349710 | Msa0462500 | 0.881687 | 1.951812e-70 | -8.615850e-47 |
| Msa0349710 | Msa0472950 | 0.840597 | 7.901676e-58 | -8.615850e-47 |
| Msa0349710 | Msa0474520 | 0.825935 | 3.572413e-54 | -8.615850e-47 |
| Msa0349710 | Msa0475790 | 0.800126 | 1.667772e-48 | -8.615850e-47 |
| Msa0349710 | Msa0480220 | 0.800421 | 1.452462e-48 | -8.615850e-47 |
| Msa0349710 | Msa0483910 | 0.846239 | 2.460595e-59 | -8.615850e-47 |
| Msa0349710 | Msa0500380 | 0.826888 | 2.118921e-54 | -8.615850e-47 |
| Msa0349710 | Msa0511750 | 0.826152 | 3.173018e-54 | -8.615850e-47 |
| Msa0349710 | Msa0517250 | 0.832793 | 7.716915e-56 | -8.615850e-47 |
| Msa0349710 | Msa0520890 | 0.822220 | 2.661759e-53 | -8.615850e-47 |
| Msa0349710 | Msa0524190 | 0.808333 | 3.261422e-50 | -8.615850e-47 |
| Msa0349710 | Msa0527860 | 0.824115 | 9.614646e-54 | -8.615850e-47 |
| Msa0349710 | Msa0532070 | 0.857348 | 1.735829e-62 | -8.615850e-47 |
| Msa0349710 | Msa0547900 | 0.818593 | 1.807915e-52 | -8.615850e-47 |
| Msa0349710 | Msa0557290 | 0.800013 | 1.758650e-48 | -8.615850e-47 |
| Msa0349710 | Msa0563940 | 0.807305 | 5.392762e-50 | -8.615850e-47 |
| Msa0349710 | Msa0569200 | 0.838806 | 2.310436e-57 | -8.615850e-47 |
| Msa0349710 | Msa0575920 | 0.802156 | 6.413485e-49 | -8.615850e-47 |
| Msa0349710 | Msa0576880 | 0.804439 | 2.159041e-49 | -8.615850e-47 |
| Msa0349710 | Msa0582450 | 0.828998 | 6.582060e-55 | -8.615850e-47 |
| Msa0349710 | Msa0586190 | 0.829586 | 4.738260e-55 | -8.615850e-47 |
| Msa0349710 | Msa0587620 | 0.805862 | 1.087443e-49 | -8.615850e-47 |
| Msa0349710 | Msa0600930 | 0.805500 | 1.295223e-49 | -8.615850e-47 |
| Msa0349710 | Msa0602880 | 0.817226 | 3.679871e-52 | -8.615850e-47 |
| Msa0349710 | Msa0625630 | 0.803540 | 3.320513e-49 | -8.615850e-47 |
| Msa0349710 | Msa0626450 | 0.850669 | 1.462587e-60 | -8.615850e-47 |
| Msa0349710 | Msa0626490 | 0.850858 | 1.294063e-60 | -8.615850e-47 |
| Msa0349710 | Msa0643300 | 0.800497 | 1.401723e-48 | -8.615850e-47 |
| Msa0349710 | Msa0663300 | 0.824832 | 6.519677e-54 | -8.615850e-47 |
| Msa0349710 | Msa0664060 | 0.827955 | 1.175557e-54 | -8.615850e-47 |
| Msa0349710 | Msa0664600 | 0.847641 | 1.016971e-59 | -8.615850e-47 |
| Msa0349710 | Msa0683570 | 0.832904 | 7.243168e-56 | -8.615850e-47 |
| Msa0349710 | Msa0689520 | 0.845612 | 3.643318e-59 | -8.615850e-47 |
| Msa0349710 | Msa0698830 | 0.801706 | 7.933627e-49 | -8.615850e-47 |
| Msa0349710 | Msa0700460 | 0.855332 | 6.772826e-62 | -8.615850e-47 |
| Msa0349710 | Msa0709740 | 0.829111 | 6.181058e-55 | -8.615850e-47 |
| Msa0349710 | Msa0711970 | 0.838140 | 3.432664e-57 | -8.615850e-47 |
| Msa0349710 | Msa0718550 | 0.814808 | 1.275675e-51 | -8.615850e-47 |
| Msa0349710 | Msa0730430 | 0.806135 | 9.528263e-50 | -8.615850e-47 |
| Msa0349710 | Msa0749740 | 0.846389 | 2.239729e-59 | -8.615850e-47 |
| Msa0349710 | Msa0749770 | 0.842302 | 2.809380e-58 | -8.615850e-47 |
| Msa0349710 | Msa0750090 | 0.838201 | 3.309336e-57 | -8.615850e-47 |
| Msa0349710 | Msa0751570 | 0.804441 | 2.157362e-49 | -8.615850e-47 |
| Msa0349710 | Msa0754520 | 0.823853 | 1.107705e-53 | -8.615850e-47 |
| Msa0349710 | Msa0756490 | 0.800513 | 1.391390e-48 | -8.615850e-47 |
| Msa0349710 | Msa0759650 | 0.811913 | 5.519621e-51 | -8.615850e-47 |
| Msa0349710 | Msa0765840 | 0.834209 | 3.421216e-56 | -8.615850e-47 |
| Msa0349710 | Msa0768990 | 0.806579 | 7.680877e-50 | -8.615850e-47 |
| Msa0349710 | Msa0794810 | 0.800032 | 1.742965e-48 | -8.615850e-47 |
| Msa0349710 | Msa0823820 | 0.809132 | 2.200248e-50 | -8.615850e-47 |
| Msa0349710 | Msa0825530 | 0.821352 | 4.225619e-53 | -8.615850e-47 |
| Msa0349710 | Msa0832910 | 0.814490 | 1.500505e-51 | -8.615850e-47 |
| Msa0349710 | Msa0833220 | 0.820989 | 5.125322e-53 | -8.615850e-47 |
| Msa0349710 | Msa0835490 | 0.801724 | 7.866755e-49 | -8.615850e-47 |
| Msa0349710 | Msa0845440 | 0.822381 | 2.442267e-53 | -8.615850e-47 |
| Msa0349710 | Msa0849390 | 0.805292 | 1.432590e-49 | -8.615850e-47 |
| Msa0349710 | Msa0856050 | 0.800264 | 1.563610e-48 | -8.615850e-47 |
| Msa0349710 | Msa0863010 | 0.808038 | 3.768569e-50 | -8.615850e-47 |
| Msa0349710 | Msa0869780 | 0.819580 | 1.077718e-52 | -8.615850e-47 |
| Msa0349710 | Msa0880680 | 0.830122 | 3.508113e-55 | -8.615850e-47 |
| Msa0349710 | Msa0909230 | 0.832437 | 9.456048e-56 | -8.615850e-47 |
| Msa0349710 | Msa0919770 | 0.827709 | 1.347131e-54 | -8.615850e-47 |
| Msa0349710 | Msa0938480 | 0.802249 | 6.136433e-49 | -8.615850e-47 |
| Msa0349710 | Msa0945110 | 0.874063 | 9.047730e-68 | -8.615850e-47 |
| Msa0349710 | Msa0975640 | 0.802084 | 6.635283e-49 | -8.615850e-47 |
| Msa0349710 | Msa0981320 | 0.838470 | 2.822205e-57 | -8.615850e-47 |
| Msa0349710 | Msa1003740 | 0.839651 | 1.394907e-57 | -8.615850e-47 |
| Msa0349710 | Msa1003800 | 0.853675 | 2.042798e-61 | -8.615850e-47 |
| Msa0349710 | Msa1003930 | 0.843002 | 1.830804e-58 | -8.615850e-47 |
| Msa0349710 | Msa1018690 | 0.874674 | 5.616984e-68 | -8.615850e-47 |
| Msa0349710 | Msa1020480 | 0.801004 | 1.104758e-48 | -8.615850e-47 |
| Msa0349710 | Msa1020670 | 0.821428 | 4.058220e-53 | -8.615850e-47 |
| Msa0349710 | Msa1030980 | 0.803514 | 3.361042e-49 | -8.615850e-47 |
| Msa0349710 | Msa1030990 | 0.806830 | 6.799056e-50 | -8.615850e-47 |
| Msa0349710 | Msa1031040 | 0.811646 | 6.307529e-51 | -8.615850e-47 |
| Msa0349710 | Msa1031050 | 0.810355 | 1.200915e-50 | -8.615850e-47 |
| Msa0349710 | Msa1034780 | 0.817594 | 3.041030e-52 | -8.615850e-47 |
| Msa0349710 | Msa1037640 | 0.855269 | 7.067900e-62 | -8.615850e-47 |
| Msa0349710 | Msa1042160 | 0.830106 | 3.538975e-55 | -8.615850e-47 |
| Msa0349710 | Msa1042190 | 0.831333 | 1.771080e-55 | -8.615850e-47 |
| Msa0349710 | Msa1044680 | 0.821401 | 4.118734e-53 | -8.615850e-47 |
| Msa0349710 | Msa1045140 | 0.829201 | 5.876775e-55 | -8.615850e-47 |
| Msa0349710 | Msa1068190 | 0.800197 | 1.613393e-48 | -8.615850e-47 |
| Msa0349710 | Msa1074370 | 0.812727 | 3.664750e-51 | -8.615850e-47 |
| Msa0349710 | Msa1080000 | 0.815366 | 9.591227e-52 | -8.615850e-47 |
| Msa0349710 | Msa1084960 | 0.803217 | 3.872676e-49 | -8.615850e-47 |
| Msa0349710 | Msa1096960 | 0.828720 | 7.684145e-55 | -8.615850e-47 |
| Msa0349710 | Msa1096970 | 0.815678 | 8.174286e-52 | -8.615850e-47 |
| Msa0349710 | Msa1097980 | 0.812468 | 4.176783e-51 | -8.615850e-47 |
| Msa0349710 | Msa1103580 | 0.805311 | 1.419060e-49 | -8.615850e-47 |
| Msa0349710 | Msa1105640 | 0.811374 | 7.227634e-51 | -8.615850e-47 |
| Msa0349710 | Msa1113340 | 0.842563 | 2.395964e-58 | -8.615850e-47 |
| Msa0349710 | Msa1123210 | 0.828378 | 9.297017e-55 | -8.615850e-47 |
| Msa0349710 | Msa1130280 | 0.867331 | 1.480413e-65 | -8.615850e-47 |
| Msa0349710 | Msa1160910 | 0.839530 | 1.499620e-57 | -8.615850e-47 |
| Msa0349710 | Msa1162150 | 0.802717 | 4.913058e-49 | -8.615850e-47 |
| Msa0349710 | Msa1167470 | 0.837184 | 6.036493e-57 | -8.615850e-47 |
| Msa0349710 | Msa1183120 | 0.807647 | 4.564110e-50 | -8.615850e-47 |
| Msa0349710 | Msa1186520 | 0.821182 | 4.624892e-53 | -8.615850e-47 |
| Msa0349710 | Msa1196450 | 0.817545 | 3.119619e-52 | -8.615850e-47 |
| Msa0349710 | Msa1199570 | 0.804968 | 1.674297e-49 | -8.615850e-47 |
| Msa0349710 | Msa1209460 | 0.802650 | 5.071990e-49 | -8.615850e-47 |
| Msa0349710 | Msa1216110 | 0.828911 | 6.908173e-55 | -8.615850e-47 |
| Msa0349710 | Msa1223470 | 0.819042 | 1.429063e-52 | -8.615850e-47 |
| Msa0349710 | Msa1224930 | 0.800395 | 1.470519e-48 | -8.615850e-47 |
| Msa0349710 | Msa1225700 | 0.825570 | 4.361277e-54 | -8.615850e-47 |
| Msa0349710 | Msa1229500 | 0.806792 | 6.925519e-50 | -8.615850e-47 |
| Msa0349710 | Msa1232710 | 0.822148 | 2.765463e-53 | -8.615850e-47 |
| Msa0349710 | Msa1240770 | 0.850497 | 1.634040e-60 | -8.615850e-47 |
| Msa0349710 | Msa1252190 | 0.802243 | 6.153813e-49 | -8.615850e-47 |
| Msa0349710 | Msa1268670 | 0.825172 | 5.417573e-54 | -8.615850e-47 |
| Msa0349710 | Msa1269480 | 0.840002 | 1.129889e-57 | -8.615850e-47 |
| Msa0349710 | Msa1271990 | 0.801328 | 9.483332e-49 | -8.615850e-47 |
| Msa0349710 | Msa1282260 | 0.825637 | 4.205255e-54 | -8.615850e-47 |
| Msa0349710 | Msa1283910 | 0.834231 | 3.377959e-56 | -8.615850e-47 |
| Msa0349710 | Msa1290770 | 0.827068 | 1.919120e-54 | -8.615850e-47 |
| Msa0349710 | Msa1292830 | 0.801819 | 7.519749e-49 | -8.615850e-47 |
| Msa0349710 | Msa1296410 | 0.811047 | 8.512486e-51 | -8.615850e-47 |
| Msa0349710 | Msa1307570 | 0.818823 | 1.602739e-52 | -8.615850e-47 |
| Msa0349710 | Msa1309790 | 0.801752 | 7.764016e-49 | -8.615850e-47 |
| Msa0349710 | Msa1313300 | 0.823411 | 1.405721e-53 | -8.615850e-47 |
| Msa0349710 | Msa1315130 | 0.816080 | 6.648414e-52 | -8.615850e-47 |
| Msa0349710 | Msa1315160 | 0.812177 | 4.833449e-51 | -8.615850e-47 |
| Msa0349710 | Msa1321340 | 0.857332 | 1.753778e-62 | -8.615850e-47 |
| Msa0349710 | Msa1328710 | 0.811178 | 7.970503e-51 | -8.615850e-47 |
| Msa0349710 | Msa1336120 | 0.814173 | 1.762610e-51 | -8.615850e-47 |
| Msa0349710 | Msa1358220 | 0.803893 | 2.805477e-49 | -8.615850e-47 |
| Msa0349710 | Msa1367370 | 0.806723 | 7.161486e-50 | -8.615850e-47 |
| Msa0349710 | Msa1369150 | 0.817029 | 4.076439e-52 | -8.615850e-47 |
| Msa0349710 | Msa1369550 | 0.849097 | 4.023810e-60 | -8.615850e-47 |
| Msa0349710 | Msa1374040 | 0.801028 | 1.092037e-48 | -8.615850e-47 |
| Msa0349710 | Msa1384650 | 0.830579 | 2.712310e-55 | -8.615850e-47 |
| Msa0349710 | Msa1391770 | 0.800316 | 1.526328e-48 | -8.615850e-47 |
| Msa0349710 | Msa1393780 | 0.835116 | 2.023849e-56 | -8.615850e-47 |
| Msa0349710 | Msa1412350 | 0.843942 | 1.027274e-58 | -8.615850e-47 |
| Msa0349710 | Msa1413690 | 0.833342 | 5.634008e-56 | -8.615850e-47 |
| Msa0349710 | Msa1419460 | 0.815210 | 1.038793e-51 | -8.615850e-47 |
| Msa0349710 | Msa1422420 | 0.833762 | 4.427225e-56 | -8.615850e-47 |
| Msa0349710 | Msa1423670 | 0.805940 | 1.047053e-49 | -8.615850e-47 |
| Msa0349710 | Msa1440960 | 0.842223 | 2.948664e-58 | -8.615850e-47 |
| Msa0349710 | Msa1443110 | 0.806265 | 8.947656e-50 | -8.615850e-47 |
| Msa0349710 | Msa1443600 | 0.805280 | 1.440350e-49 | -8.615850e-47 |
| Msa0349710 | Msa1445500 | 0.822857 | 1.892785e-53 | -8.615850e-47 |
| Msa0349710 | Msa1452930 | 0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa0349710 | Msa1454140 | 0.866592 | 2.547408e-65 | -8.615850e-47 |
| Msa0349710 | Msa1459380 | 0.806880 | 6.635577e-50 | -8.615850e-47 |
| Msa0349710 | Msa1462710 | 0.813214 | 2.867034e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349710 | MtrunA17_Chr3g0083561 | 99.372 | 478 | 3 | 0 | 1 | 478 | 1 | 478 | 0.0 | 968 |
| Msa0349710 | MtrunA17_Chr1g0156541 | 98.536 | 478 | 7 | 0 | 1 | 478 | 1 | 478 | 0.0 | 962 |
| Msa0349710 | MtrunA17_Chr8g0352721 | 84.468 | 470 | 70 | 1 | 7 | 476 | 1 | 467 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349710 | AT3G54470.1 | 77.263 | 475 | 106 | 2 | 5 | 478 | 2 | 475 | 0.0 | 757 |
Find 164 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTTCCTGTTGGATTCT+TGG | 0.162358 | 3_1:-13755224 | None:intergenic |
| TGGAAGAGACAGAGGAAATT+AGG | 0.175139 | 3_1:-13754703 | None:intergenic |
| GCAAGGTGGGCGGGAAAATT+TGG | 0.209823 | 3_1:+13754997 | Msa0349710:CDS |
| GAACATTCCGACTTTGTAAT+TGG | 0.222966 | 3_1:+13756512 | Msa0349710:CDS |
| AAAGACTTGACCTTGGTTAT+TGG | 0.229339 | 3_1:-13755175 | None:intergenic |
| TTGCTTAATCATTGAGGATT+TGG | 0.242028 | 3_1:+13754883 | Msa0349710:CDS |
| CATAAATCCTTCTTTCATTC+AGG | 0.244652 | 3_1:+13756574 | Msa0349710:CDS |
| GCATTTGTTTCATCAACTTT+AGG | 0.255737 | 3_1:-13757637 | None:intergenic |
| GTGACTGGTGGCGATGGTTT+AGG | 0.260282 | 3_1:+13756617 | Msa0349710:CDS |
| CTGAATGAAAGAAGGATTTA+TGG | 0.267181 | 3_1:-13756573 | None:intergenic |
| AGGTCAAGTCTTTGTCATTT+GGG | 0.286862 | 3_1:+13755185 | Msa0349710:CDS |
| CCAAGGATGGAATGCATATT+TGG | 0.288220 | 3_1:+13757401 | Msa0349710:CDS |
| AAAGAAGTTATTTGAGATAA+TGG | 0.294923 | 3_1:+13755240 | Msa0349710:CDS |
| CCAAATATGCATTCCATCCT+TGG | 0.307382 | 3_1:-13757401 | None:intergenic |
| ATCTGCATTTGAAGAATAAA+AGG | 0.312439 | 3_1:+13757439 | Msa0349710:three_prime_UTR |
| AAGGTCAAGTCTTTGTCATT+TGG | 0.313820 | 3_1:+13755184 | Msa0349710:CDS |
| TTAGGGTCTGCGAGATTTGC+TGG | 0.320828 | 3_1:-13754685 | None:intergenic |
| ATGCAGATCTCAAGCAGATT+TGG | 0.330274 | 3_1:-13757424 | None:intergenic |
| ATCTCCCTTGGCAAGGTTAC+CGG | 0.335912 | 3_1:-13756459 | None:intergenic |
| TACCAGTGGAACATCAGTTT+TGG | 0.340084 | 3_1:+13754907 | Msa0349710:CDS |
| GGCAACTTTAAGCTCAAATC+TGG | 0.343038 | 3_1:+13754605 | Msa0349710:CDS |
| TCTTTCATTCAGGCAACTCC+TGG | 0.349446 | 3_1:+13756584 | Msa0349710:CDS |
| TGACTGGTGGCGATGGTTTA+GGG | 0.363262 | 3_1:+13756618 | Msa0349710:CDS |
| CAAAGTTCTTAGATGAGAAT+AGG | 0.374280 | 3_1:+13755122 | Msa0349710:CDS |
| GTCTTTGTCATTTGGGGAAA+GGG | 0.376781 | 3_1:+13755192 | Msa0349710:CDS |
| CCTCAATGATTAAGCAACTT+TGG | 0.383142 | 3_1:-13754877 | None:intergenic |
| GGAAGAGACAGAGGAAATTA+GGG | 0.389314 | 3_1:-13754702 | None:intergenic |
| GGATCTTTCACATATTAGAT+TGG | 0.390057 | 3_1:+13756223 | Msa0349710:CDS |
| AATTATTAAATTGACTGAAA+TGG | 0.395052 | 3_1:+13755045 | Msa0349710:CDS |
| ACATAACTTCTTAATCTTTG+AGG | 0.401323 | 3_1:+13756053 | Msa0349710:CDS |
| GAGATATCAGCTGTGAAATT+CGG | 0.407178 | 3_1:+13754584 | Msa0349710:CDS |
| ATGTACCCGAGGCCTTCCTC+TGG | 0.411635 | 3_1:-13757513 | None:intergenic |
| TCAAATAACTTCTTTCCTGT+TGG | 0.412197 | 3_1:-13755232 | None:intergenic |
| TTTAGTCCATCCACGATTCC+AGG | 0.414929 | 3_1:-13756279 | None:intergenic |
| GGTGCCCCTGGCCATGATGC+TGG | 0.418736 | 3_1:-13756551 | None:intergenic |
| GATCTTTCACATATTAGATT+GGG | 0.421238 | 3_1:+13756224 | Msa0349710:CDS |
| AGGCTTGAAATCACCTTCAA+TGG | 0.421566 | 3_1:-13754852 | None:intergenic |
| TCAGGGTTTGCCTCGTGGTA+GGG | 0.421932 | 3_1:+13756406 | Msa0349710:intron |
| ATAAGAATATCTCACCTTCT+CGG | 0.427341 | 3_1:-13755329 | None:intergenic |
| AGAAGCTTAGAGCCAAAATC+AGG | 0.428014 | 3_1:-13755790 | None:intergenic |
| CACCTTGCTCTCTATCAATC+AGG | 0.434163 | 3_1:-13754982 | None:intergenic |
| ATCCCTGTAACACACTCAAA+AGG | 0.435173 | 3_1:+13754497 | Msa0349710:five_prime_UTR |
| ATTGAAGGTGATTTCAAGCC+TGG | 0.435970 | 3_1:+13754854 | Msa0349710:CDS |
| GACTTGATGACGAGATGGTA+GGG | 0.437781 | 3_1:+13755092 | Msa0349710:CDS |
| GAAGGAGAGTAATCTGTGTT+TGG | 0.444097 | 3_1:+13755267 | Msa0349710:CDS |
| GTCAATCCAGCATCATGGCC+AGG | 0.449072 | 3_1:+13756545 | Msa0349710:CDS |
| CCAAAATCAGGAGTAAAATC+TGG | 0.451598 | 3_1:-13755778 | None:intergenic |
| GCAATGGGTAAGGCAGTGTA+AGG | 0.460275 | 3_1:-13754752 | None:intergenic |
| TTCCAGGTCGTCCACGATAG+AGG | 0.461238 | 3_1:+13757303 | Msa0349710:intron |
| CCAAAGTTGCTTAATCATTG+AGG | 0.466579 | 3_1:+13754877 | Msa0349710:CDS |
| TCCTTACGACGCATGACCAT+GGG | 0.467155 | 3_1:-13754803 | None:intergenic |
| GGCAACTCCTGGAGTTCAAA+TGG | 0.472058 | 3_1:+13756595 | Msa0349710:CDS |
| TACTGAGGTCGAGTGTTCAC+TGG | 0.472463 | 3_1:-13752602 | None:intergenic |
| ACCTCATTTGATCTTGTATG+TGG | 0.474446 | 3_1:+13754725 | Msa0349710:CDS |
| GCGGAGATGATCAACGGCGG+CGG | 0.482617 | 3_1:-13752646 | None:intergenic |
| CGTGGATGGACTAAAATTGA+AGG | 0.484767 | 3_1:+13756287 | Msa0349710:CDS |
| TTCCAAAACTGATGTTCCAC+TGG | 0.489744 | 3_1:-13754909 | None:intergenic |
| GTAAATGCTCACATAATCTC+TGG | 0.493470 | 3_1:+13756255 | Msa0349710:CDS |
| TATTCATGAGCTGCCTCAGC+AGG | 0.493515 | 3_1:-13757372 | None:intergenic |
| TGAATGAAAGAAGGATTTAT+GGG | 0.493705 | 3_1:-13756572 | None:intergenic |
| CTGTGTTTGGCTGCAGATGT+TGG | 0.494453 | 3_1:+13755280 | Msa0349710:CDS |
| GACACATGTGGCAATGGGTA+AGG | 0.497143 | 3_1:-13754762 | None:intergenic |
| GCTCACATAATCTCTGGTCC+TGG | 0.498743 | 3_1:+13756261 | Msa0349710:CDS |
| CGGGAAAATTTGGAGGAGAA+TGG | 0.500157 | 3_1:+13755007 | Msa0349710:CDS |
| AAGAGAGACACATGTGGCAA+TGG | 0.500349 | 3_1:-13754768 | None:intergenic |
| TCAATCCAGCATCATGGCCA+GGG | 0.503889 | 3_1:+13756546 | Msa0349710:CDS |
| AGTCTTTGTCATTTGGGGAA+AGG | 0.506387 | 3_1:+13755191 | Msa0349710:CDS |
| GGACATGGCGTCATCATCAT+TGG | 0.506691 | 3_1:+13754535 | Msa0349710:exon |
| CCAGTCACCATTTGAACTCC+AGG | 0.507708 | 3_1:-13756602 | None:intergenic |
| GTCTTCAGCAAGCATATCTC+AGG | 0.509329 | 3_1:-13755739 | None:intergenic |
| CAGGGTTTGCCTCGTGGTAG+GGG | 0.510707 | 3_1:+13756407 | Msa0349710:intron |
| ACAAATGCAAGCATTGTTTG+AGG | 0.511644 | 3_1:+13757652 | Msa0349710:three_prime_UTR |
| TCCCTGTAACACACTCAAAA+GGG | 0.512375 | 3_1:+13754498 | Msa0349710:five_prime_UTR |
| GTTAGTAACTTATATTGAAG+TGG | 0.513434 | 3_1:+13757560 | Msa0349710:three_prime_UTR |
| ACAGTAACCATGCAATATGC+AGG | 0.513518 | 3_1:+13756102 | Msa0349710:CDS |
| AATCTGTCCAAGAATCCAAC+AGG | 0.514570 | 3_1:+13755217 | Msa0349710:CDS |
| ATGATTAAGCAACTTTGGCC+AGG | 0.515619 | 3_1:-13754872 | None:intergenic |
| TGTAACCCAGAGGAAGGCCT+CGG | 0.519321 | 3_1:+13757507 | Msa0349710:three_prime_UTR |
| AGAGAGACACATGTGGCAAT+GGG | 0.520298 | 3_1:-13754767 | None:intergenic |
| TGGCCATGATGCTGGATTGA+CGG | 0.520423 | 3_1:-13756543 | None:intergenic |
| AGCTGCACCACTACGTTCTG+TGG | 0.521478 | 3_1:+13754934 | Msa0349710:CDS |
| GACATTATCATCGTTGGACG+TGG | 0.523138 | 3_1:+13757330 | Msa0349710:CDS |
| TGATAGAGAGCAAGGTGGGC+GGG | 0.523188 | 3_1:+13754988 | Msa0349710:CDS |
| CCCCATGGTCATGCGTCGTA+AGG | 0.523772 | 3_1:+13754802 | Msa0349710:CDS |
| ATGAATACCGTGTCCAAGGA+TGG | 0.523839 | 3_1:+13757388 | Msa0349710:CDS |
| AGACGGAGGTCAATGTAGAT+TGG | 0.523857 | 3_1:-13754638 | None:intergenic |
| GAAGGATTTATGGGTGCCCC+TGG | 0.524315 | 3_1:-13756563 | None:intergenic |
| GGAAGTGACATTATCATCGT+TGG | 0.524402 | 3_1:+13757324 | Msa0349710:CDS |
| GGCACTGCTAAAGCCATTGA+AGG | 0.527673 | 3_1:+13754839 | Msa0349710:CDS |
| AAGGATAAGATATGATGAGA+CGG | 0.530450 | 3_1:-13754655 | None:intergenic |
| ATTTGAGATAATGGCTCAGA+AGG | 0.531327 | 3_1:+13755249 | Msa0349710:CDS |
| ATTATACTTCTGAAATCAAG+TGG | 0.531448 | 3_1:-13757722 | None:intergenic |
| TCTGGTCCTGGAATCGTGGA+TGG | 0.532929 | 3_1:+13756273 | Msa0349710:CDS |
| CTCAGGGTTTGCCTCGTGGT+AGG | 0.534371 | 3_1:+13756405 | Msa0349710:intron |
| TTCCTTACGACGCATGACCA+TGG | 0.546727 | 3_1:-13754804 | None:intergenic |
| ATTTCACAGCTGATATCTCA+TGG | 0.551164 | 3_1:-13754580 | None:intergenic |
| GATCGTAAATTTGCTGACAT+TGG | 0.551409 | 3_1:+13756075 | Msa0349710:CDS |
| CTTGCTGAAATGAGTTCAGC+CGG | 0.554751 | 3_1:+13756440 | Msa0349710:CDS |
| AGACTTGATGACGAGATGGT+AGG | 0.561737 | 3_1:+13755091 | Msa0349710:CDS |
| GAAGGTTGCAGCTGTGGCAA+AGG | 0.562858 | 3_1:+13755144 | Msa0349710:CDS |
| GAATAGGAAGGTTGCAGCTG+TGG | 0.569252 | 3_1:+13755138 | Msa0349710:CDS |
| AGCAGCAGTATAATCTCCCT+TGG | 0.569550 | 3_1:-13756471 | None:intergenic |
| AACGGCGGCGGCGCGGAGAG+AGG | 0.570641 | 3_1:-13752634 | None:intergenic |
| ATTGAGGATTTGGTTACCAG+TGG | 0.571630 | 3_1:+13754893 | Msa0349710:CDS |
| GCTCATGAATACCGTGTCCA+AGG | 0.571738 | 3_1:+13757384 | Msa0349710:CDS |
| CCTGGAGTTCAAATGGTGAC+TGG | 0.574925 | 3_1:+13756602 | Msa0349710:CDS |
| GTAACCCAGAGGAAGGCCTC+GGG | 0.575667 | 3_1:+13757508 | Msa0349710:three_prime_UTR |
| CGTTGGACGTGGCATCATCA+AGG | 0.576271 | 3_1:+13757341 | Msa0349710:CDS |
| GCTGCACCACTACGTTCTGT+GGG | 0.576410 | 3_1:+13754935 | Msa0349710:CDS |
| TATGAAGCCAATTACAAAGT+CGG | 0.577391 | 3_1:-13756519 | None:intergenic |
| TATCCGTCAATCCAGCATCA+TGG | 0.578292 | 3_1:+13756540 | Msa0349710:CDS |
| GGTCAAGTCTTTGTCATTTG+GGG | 0.580836 | 3_1:+13755186 | Msa0349710:CDS |
| CAAATGGTGACTGGTGGCGA+TGG | 0.583195 | 3_1:+13756611 | Msa0349710:CDS |
| GAGATTTGCTGGAGGAGAGA+AGG | 0.583230 | 3_1:-13754674 | None:intergenic |
| GGAGTTGCCTGAATGAAAGA+AGG | 0.584092 | 3_1:-13756581 | None:intergenic |
| AATCTCTGGTCCTGGAATCG+TGG | 0.585281 | 3_1:+13756269 | Msa0349710:CDS |
| TTCAGCCGGTAACCTTGCCA+AGG | 0.587283 | 3_1:+13756454 | Msa0349710:CDS |
| GTACCTCGGTTGAAGCAAAA+CGG | 0.587506 | 3_1:-13752676 | None:intergenic |
| GTTCTTAGATGAGAATAGGA+AGG | 0.589757 | 3_1:+13755126 | Msa0349710:CDS |
| ACGGCGGCGGCGCGGAGAGA+GGG | 0.590090 | 3_1:-13752633 | None:intergenic |
| GAATATTATTTGTGAGGACA+TGG | 0.590923 | 3_1:+13754520 | Msa0349710:exon |
| TGTACCCGAGGCCTTCCTCT+GGG | 0.595293 | 3_1:-13757512 | None:intergenic |
| AAAAGGGAATATTATTTGTG+AGG | 0.598684 | 3_1:+13754514 | Msa0349710:five_prime_UTR |
| TGGAAGACTTGATGACGAGA+TGG | 0.604205 | 3_1:+13755087 | Msa0349710:CDS |
| ACTTGATGACGAGATGGTAG+GGG | 0.608317 | 3_1:+13755093 | Msa0349710:CDS |
| TAATGTCACTTCCTCTATCG+TGG | 0.612294 | 3_1:-13757314 | None:intergenic |
| GTCCTGATTGATAGAGAGCA+AGG | 0.612462 | 3_1:+13754980 | Msa0349710:CDS |
| ACTATACCCTGCATATTGCA+TGG | 0.614445 | 3_1:-13756109 | None:intergenic |
| ATTGCTTGAAATTGCCGAGA+AGG | 0.616911 | 3_1:+13755315 | Msa0349710:CDS |
| CGTAAGGAAGTCAAAGACTA+CGG | 0.621272 | 3_1:+13754818 | Msa0349710:CDS |
| CAGTATAATCTCCCTTGGCA+AGG | 0.623016 | 3_1:-13756466 | None:intergenic |
| AGGTGGGCGGGAAAATTTGG+AGG | 0.623527 | 3_1:+13755000 | Msa0349710:CDS |
| ACCACATACAAGATCAAATG+AGG | 0.625670 | 3_1:-13754726 | None:intergenic |
| AAATGACAAAGACTTGACCT+TGG | 0.633719 | 3_1:-13755182 | None:intergenic |
| GATGATCAACGGCGGCGGCG+CGG | 0.634436 | 3_1:-13752641 | None:intergenic |
| TCTTGCTCAGAGTATCCCCA+TGG | 0.636931 | 3_1:+13754787 | Msa0349710:CDS |
| ATGCTTGCTGAAGACTCATG+TGG | 0.637264 | 3_1:+13755747 | Msa0349710:CDS |
| CAATCCAGCATCATGGCCAG+GGG | 0.638220 | 3_1:+13756547 | Msa0349710:CDS |
| GAGAGGGTAGTGAGTTACTG+AGG | 0.638712 | 3_1:-13752617 | None:intergenic |
| TTGATAGAGAGCAAGGTGGG+CGG | 0.643970 | 3_1:+13754987 | Msa0349710:CDS |
| CAAGGCAGCAAATCCTGCTG+AGG | 0.645766 | 3_1:+13757359 | Msa0349710:CDS |
| AAATGAGGTGGAAGAGACAG+AGG | 0.646361 | 3_1:-13754711 | None:intergenic |
| TGATTGATAGAGAGCAAGGT+GGG | 0.648024 | 3_1:+13754984 | Msa0349710:CDS |
| ACATACAAGATCAAATGAGG+TGG | 0.650465 | 3_1:-13754723 | None:intergenic |
| TGCTGCATTGAAAATTGCTG+AGG | 0.652056 | 3_1:+13756490 | Msa0349710:CDS |
| CAGTAACCATGCAATATGCA+GGG | 0.653666 | 3_1:+13756103 | Msa0349710:CDS |
| TTTCACTGTAACCCAGAGGA+AGG | 0.654967 | 3_1:+13757501 | Msa0349710:three_prime_UTR |
| ATGCATTCCATCCTTGGACA+CGG | 0.656504 | 3_1:-13757395 | None:intergenic |
| GGTTGAGAAGCCAATAACCA+AGG | 0.658377 | 3_1:+13755165 | Msa0349710:CDS |
| CATACTCAGGGTTTGCCTCG+TGG | 0.665328 | 3_1:+13756401 | Msa0349710:intron |
| TCAGCCGGTAACCTTGCCAA+GGG | 0.668243 | 3_1:+13756455 | Msa0349710:CDS |
| TCAACATTATAATGTACCCG+AGG | 0.672281 | 3_1:-13757524 | None:intergenic |
| CAATGGGTAAGGCAGTGTAA+GGG | 0.675950 | 3_1:-13754751 | None:intergenic |
| CCTTACGACGCATGACCATG+GGG | 0.683791 | 3_1:-13754802 | None:intergenic |
| GGAGTTCAAATGGTGACTGG+TGG | 0.701669 | 3_1:+13756605 | Msa0349710:CDS |
| GATAAGATATGATGAGACGG+AGG | 0.705591 | 3_1:-13754652 | None:intergenic |
| TTCAACCCCACAGAACGTAG+TGG | 0.709421 | 3_1:-13754941 | None:intergenic |
| CTGCACCACTACGTTCTGTG+GGG | 0.713121 | 3_1:+13754936 | Msa0349710:CDS |
| GGGTCTGCGAGATTTGCTGG+AGG | 0.719216 | 3_1:-13754682 | None:intergenic |
| AGCAATAGTCCCCTACCACG+AGG | 0.719710 | 3_1:-13756416 | None:intergenic |
| CTAATTTCACTGTAACCCAG+AGG | 0.724449 | 3_1:+13757497 | Msa0349710:three_prime_UTR |
| CTGATTGATAGAGAGCAAGG+TGG | 0.725576 | 3_1:+13754983 | Msa0349710:CDS |
| CTGAGCAAGAGAGACACATG+TGG | 0.763908 | 3_1:-13754774 | None:intergenic |
| GGGGTTGAAGATCAGTGACG+CGG | 0.777219 | 3_1:+13754955 | Msa0349710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATAATAAATATTATAA+TGG | - | chr3_1:13756332-13756351 | None:intergenic | 0.0% |
| !!! | CATTTTTCTTATATTATTAT+TGG | + | chr3_1:13752878-13752897 | Msa0349710:intron | 10.0% |
| !!! | TGTTTTTTTATAAAAAAGAA+AGG | + | chr3_1:13757692-13757711 | Msa0349710:three_prime_UTR | 10.0% |
| !!! | AGAATATTTAAAACTTGTTT+TGG | + | chr3_1:13752999-13753018 | Msa0349710:intron | 15.0% |
| !! | TGATATTCAATAATTATGTA+TGG | + | chr3_1:13753352-13753371 | Msa0349710:intron | 15.0% |
| !!! | AAAAATCAGTTTTTTTAACA+TGG | + | chr3_1:13753560-13753579 | Msa0349710:intron | 15.0% |
| !!! | TGTTTTTTAAATTTGTATTG+TGG | + | chr3_1:13754115-13754134 | Msa0349710:intron | 15.0% |
| !! | AATTATTAAATTGACTGAAA+TGG | + | chr3_1:13755045-13755064 | Msa0349710:CDS | 15.0% |
| !! | TTAGTTAAAAGACAAATAAT+TGG | - | chr3_1:13755691-13755710 | None:intergenic | 15.0% |
| !! | TTATAAAAAAACAAAATGAC+AGG | - | chr3_1:13757685-13757704 | None:intergenic | 15.0% |
| !! | AAAAATCACACAAAAATGTA+TGG | - | chr3_1:13753041-13753060 | None:intergenic | 20.0% |
| !! | ATTCAATAATTATGTATGGA+TGG | + | chr3_1:13753356-13753375 | Msa0349710:intron | 20.0% |
| !! | AATATTGTTTCAGATGATTA+TGG | + | chr3_1:13753774-13753793 | Msa0349710:intron | 20.0% |
| !! | AAGTAGTTCAAAATTCAAAT+TGG | - | chr3_1:13753876-13753895 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTATAAGATGAGA+AGG | + | chr3_1:13753997-13754016 | Msa0349710:intron | 20.0% |
| !! | TAAAGTAGAATAACAAAAAG+TGG | - | chr3_1:13754184-13754203 | None:intergenic | 20.0% |
| !!! | TTGTTATTCTACTTTATGAA+TGG | + | chr3_1:13754188-13754207 | Msa0349710:intron | 20.0% |
| !!! | TTAAAATTTTAAGCACCTAA+GGG | - | chr3_1:13754373-13754392 | None:intergenic | 20.0% |
| !!! | AAAGAAGTTATTTGAGATAA+TGG | + | chr3_1:13755240-13755259 | Msa0349710:CDS | 20.0% |
| !! | TCACAATATTATGTACTAAA+TGG | - | chr3_1:13755579-13755598 | None:intergenic | 20.0% |
| !! | TAAAAGACAAATAATTGGTA+TGG | - | chr3_1:13755686-13755705 | None:intergenic | 20.0% |
| !! | GACTAATTGTCAATAATATT+AGG | - | chr3_1:13755867-13755886 | None:intergenic | 20.0% |
| !! | AAAATAGAACAATGTCATAT+TGG | - | chr3_1:13756190-13756209 | None:intergenic | 20.0% |
| !!! | TTCTATTTTAATATCTACAG+AGG | + | chr3_1:13756201-13756220 | Msa0349710:intron | 20.0% |
| !!! | TCTATTTTAATATCTACAGA+GGG | + | chr3_1:13756202-13756221 | Msa0349710:intron | 20.0% |
| !! | TACATATATATATCACCATT+AGG | + | chr3_1:13756904-13756923 | Msa0349710:intron | 20.0% |
| !!! | AATAGTCTTGATACTTAAAA+AGG | - | chr3_1:13757002-13757021 | None:intergenic | 20.0% |
| !!! | CAAGACTATTTATTTTTCTT+TGG | + | chr3_1:13757012-13757031 | Msa0349710:intron | 20.0% |
| !!! | TTAACAAAATGTTATTTTCC+AGG | + | chr3_1:13757287-13757306 | Msa0349710:intron | 20.0% |
| ! | ACAGATTATTTGCATAAAAG+TGG | + | chr3_1:13753067-13753086 | Msa0349710:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr3_1:13753239-13753258 | None:intergenic | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr3_1:13753287-13753306 | Msa0349710:intron | 25.0% |
| !! | TTTTATAATCCGTAACAAAC+CGG | - | chr3_1:13753324-13753343 | None:intergenic | 25.0% |
| ! | ATGTAGCAAAAAAGCAATTA+AGG | + | chr3_1:13753738-13753757 | Msa0349710:intron | 25.0% |
| !! | TTTTATAAGATGAGAAGGAA+AGG | + | chr3_1:13754002-13754021 | Msa0349710:intron | 25.0% |
| !!! | AAAGGATTTTTTTGGTGAAA+TGG | + | chr3_1:13754020-13754039 | Msa0349710:intron | 25.0% |
| !!! | AAGGATTTTTTTGGTGAAAT+GGG | + | chr3_1:13754021-13754040 | Msa0349710:intron | 25.0% |
| !!! | ATGTTTGTTAATGTTTTGCT+TGG | + | chr3_1:13754070-13754089 | Msa0349710:intron | 25.0% |
| ! | TTCTACTTTATGAATGGTAT+AGG | + | chr3_1:13754194-13754213 | Msa0349710:intron | 25.0% |
| !! | CTTAAAATTTTAAGCACCTA+AGG | - | chr3_1:13754374-13754393 | None:intergenic | 25.0% |
| ! | AAAAGGGAATATTATTTGTG+AGG | + | chr3_1:13754514-13754533 | Msa0349710:five_prime_UTR | 25.0% |
| !! | TGAAATGGTGAAAATTTTGA+GGG | + | chr3_1:13755060-13755079 | Msa0349710:CDS | 25.0% |
| !!! | TTTGTCTAATTTTTTCTGAC+AGG | + | chr3_1:13755711-13755730 | Msa0349710:intron | 25.0% |
| ! | GTCAATAATATTAGGATGAA+AGG | - | chr3_1:13755859-13755878 | None:intergenic | 25.0% |
| ! | TTCAACTTTCAATAAATGCT+AGG | - | chr3_1:13755903-13755922 | None:intergenic | 25.0% |
| ! | ACATAACTTCTTAATCTTTG+AGG | + | chr3_1:13756053-13756072 | Msa0349710:CDS | 25.0% |
| ! | GATCTTTCACATATTAGATT+GGG | + | chr3_1:13756224-13756243 | Msa0349710:CDS | 25.0% |
| ! | TGAATGAAAGAAGGATTTAT+GGG | - | chr3_1:13756575-13756594 | None:intergenic | 25.0% |
| ! | ATGCAAAAACTTACAGAATA+TGG | - | chr3_1:13756659-13756678 | None:intergenic | 25.0% |
| ! | GCAAATGAGTAAAAGATTTA+TGG | - | chr3_1:13756686-13756705 | None:intergenic | 25.0% |
| !! | AAATCTTTTACTCATTTGCT+TGG | + | chr3_1:13756687-13756706 | Msa0349710:intron | 25.0% |
| !! | AATCTTTTACTCATTTGCTT+GGG | + | chr3_1:13756688-13756707 | Msa0349710:intron | 25.0% |
| ! | ATAAGTATGATCAAGTAGTA+TGG | + | chr3_1:13756711-13756730 | Msa0349710:intron | 25.0% |
| ! | ATATATATCACCATTAGGAT+AGG | + | chr3_1:13756909-13756928 | Msa0349710:intron | 25.0% |
| ! | CTAAACAGCAGAAATATAAT+AGG | - | chr3_1:13757039-13757058 | None:intergenic | 25.0% |
| ! | CTTATATTTCTCTTACATCT+TGG | + | chr3_1:13757116-13757135 | Msa0349710:intron | 25.0% |
| ! | ATTTCAACACAAAGTTTAAG+AGG | - | chr3_1:13757175-13757194 | None:intergenic | 25.0% |
| ! | ATCTGCATTTGAAGAATAAA+AGG | + | chr3_1:13757439-13757458 | Msa0349710:three_prime_UTR | 25.0% |
| !!! | GAGTCAAAATTATGTTTTTG+CGG | + | chr3_1:13757464-13757483 | Msa0349710:three_prime_UTR | 25.0% |
| !!! | AGTCAAAATTATGTTTTTGC+GGG | + | chr3_1:13757465-13757484 | Msa0349710:three_prime_UTR | 25.0% |
| ! | GTTAGTAACTTATATTGAAG+TGG | + | chr3_1:13757560-13757579 | Msa0349710:three_prime_UTR | 25.0% |
| TTTGAGCGAAAAGTTTCTAA+TGG | - | chr3_1:13752762-13752781 | None:intergenic | 30.0% | |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr3_1:13753288-13753307 | Msa0349710:intron | 30.0% | |
| CTCACTCGAAAATTGATTAA+GGG | - | chr3_1:13753392-13753411 | None:intergenic | 30.0% | |
| TCTCACTCGAAAATTGATTA+AGG | - | chr3_1:13753393-13753412 | None:intergenic | 30.0% | |
| CTCTATTCAATAACTATGGA+TGG | - | chr3_1:13753421-13753440 | None:intergenic | 30.0% | |
| TCCATAGTTATTGAATAGAG+TGG | + | chr3_1:13753421-13753440 | Msa0349710:intron | 30.0% | |
| CCATAGTTATTGAATAGAGT+GGG | + | chr3_1:13753422-13753441 | Msa0349710:intron | 30.0% | |
| TTAAGCATAGTGCACAAAAA+GGG | + | chr3_1:13753660-13753679 | Msa0349710:intron | 30.0% | |
| !! | TGAAGAACAAACTTTTTCTG+AGG | + | chr3_1:13753684-13753703 | Msa0349710:intron | 30.0% |
| ACAAACAATAGGCGATATAA+AGG | - | chr3_1:13753907-13753926 | None:intergenic | 30.0% | |
| !!! | TGAGAAGGAAAGGATTTTTT+TGG | + | chr3_1:13754012-13754031 | Msa0349710:intron | 30.0% |
| !!! | AGGATTTTTTTGGTGAAATG+GGG | + | chr3_1:13754022-13754041 | Msa0349710:intron | 30.0% |
| ! | TGTTTTGCTTGGTTGAAATA+TGG | + | chr3_1:13754081-13754100 | Msa0349710:intron | 30.0% |
| TATGATATCATCCATGATGT+GGG | + | chr3_1:13754317-13754336 | Msa0349710:intron | 30.0% | |
| GCATGAATGTAAAAATGCAA+AGG | - | chr3_1:13754413-13754432 | None:intergenic | 30.0% | |
| GAATATTATTTGTGAGGACA+TGG | + | chr3_1:13754520-13754539 | Msa0349710:exon | 30.0% | |
| AAGGATAAGATATGATGAGA+CGG | - | chr3_1:13754658-13754677 | None:intergenic | 30.0% | |
| TTGCTTAATCATTGAGGATT+TGG | + | chr3_1:13754883-13754902 | Msa0349710:CDS | 30.0% | |
| ! | CTGAAATGGTGAAAATTTTG+AGG | + | chr3_1:13755059-13755078 | Msa0349710:CDS | 30.0% |
| CAAAGTTCTTAGATGAGAAT+AGG | + | chr3_1:13755122-13755141 | Msa0349710:CDS | 30.0% | |
| TCAAATAACTTCTTTCCTGT+TGG | - | chr3_1:13755235-13755254 | None:intergenic | 30.0% | |
| ATAAGAATATCTCACCTTCT+CGG | - | chr3_1:13755332-13755351 | None:intergenic | 30.0% | |
| ! | AAGAGAGAAAACAACTTTTG+TGG | - | chr3_1:13755413-13755432 | None:intergenic | 30.0% |
| ! | ATACATGACTCTTTCAAGTA+TGG | - | chr3_1:13755436-13755455 | None:intergenic | 30.0% |
| ATCATCAACTAGATTGTAAG+TGG | + | chr3_1:13755469-13755488 | Msa0349710:intron | 30.0% | |
| AGCTTCTATTTAACAACACT+AGG | - | chr3_1:13755503-13755522 | None:intergenic | 30.0% | |
| !!! | TCTAATTTTTTCTGACAGGT+TGG | + | chr3_1:13755715-13755734 | Msa0349710:intron | 30.0% |
| TATGTTTGTGTGAAGTTCTA+AGG | + | chr3_1:13755964-13755983 | Msa0349710:intron | 30.0% | |
| ! | TAAGGAATCTTTTACGTTTC+TGG | + | chr3_1:13755982-13756001 | Msa0349710:intron | 30.0% |
| GTTTCTCTGCAATCTTTAAT+AGG | - | chr3_1:13756035-13756054 | None:intergenic | 30.0% | |
| ATGAGGAATCTAGAAAGAAA+AGG | - | chr3_1:13756155-13756174 | None:intergenic | 30.0% | |
| GGATCTTTCACATATTAGAT+TGG | + | chr3_1:13756223-13756242 | Msa0349710:CDS | 30.0% | |
| TATGAAGCCAATTACAAAGT+CGG | - | chr3_1:13756522-13756541 | None:intergenic | 30.0% | |
| CTGAATGAAAGAAGGATTTA+TGG | - | chr3_1:13756576-13756595 | None:intergenic | 30.0% | |
| CATAAATCCTTCTTTCATTC+AGG | + | chr3_1:13756574-13756593 | Msa0349710:CDS | 30.0% | |
| ! | CATTTTCAATGTTGATACAG+AGG | - | chr3_1:13756832-13756851 | None:intergenic | 30.0% |
| ! | TAAGTGTTGTTAAGATAGTC+TGG | + | chr3_1:13756866-13756885 | Msa0349710:intron | 30.0% |
| ! | TCTTTTCTTTCCTATCCTAA+TGG | - | chr3_1:13756922-13756941 | None:intergenic | 30.0% |
| AGAATAAATTCTTCGTTTGC+TGG | + | chr3_1:13756945-13756964 | Msa0349710:intron | 30.0% | |
| ! | CAAAACAAATTAGCTTCACA+AGG | - | chr3_1:13756975-13756994 | None:intergenic | 30.0% |
| CAAAGTTTAAGAGGTTGAAT+GGG | - | chr3_1:13757166-13757185 | None:intergenic | 30.0% | |
| ACAAAGTTTAAGAGGTTGAA+TGG | - | chr3_1:13757167-13757186 | None:intergenic | 30.0% | |
| TGAAAAGAGTAGAAAGATGA+TGG | - | chr3_1:13757220-13757239 | None:intergenic | 30.0% | |
| GCATTTGTTTCATCAACTTT+AGG | - | chr3_1:13757640-13757659 | None:intergenic | 30.0% | |
| CCCACTCTATTCAATAACTA+TGG | - | chr3_1:13753425-13753444 | None:intergenic | 35.0% | |
| ! | CTTTTTGTGCACTATGCTTA+AGG | - | chr3_1:13753661-13753680 | None:intergenic | 35.0% |
| CTTAAGCATAGTGCACAAAA+AGG | + | chr3_1:13753659-13753678 | Msa0349710:intron | 35.0% | |
| !!! | CTCTGGCGTATTTTTGTTTT+TGG | + | chr3_1:13753712-13753731 | Msa0349710:intron | 35.0% |
| ACTGTGAATAGCTCAAACAA+TGG | - | chr3_1:13753849-13753868 | None:intergenic | 35.0% | |
| AAGCAATGTGCACAAACAAT+AGG | - | chr3_1:13753918-13753937 | None:intergenic | 35.0% | |
| CTATGATATCATCCATGATG+TGG | + | chr3_1:13754316-13754335 | Msa0349710:intron | 35.0% | |
| TCTTTGTCATCATATCCCTT+AGG | + | chr3_1:13754355-13754374 | Msa0349710:intron | 35.0% | |
| ATTTCACAGCTGATATCTCA+TGG | - | chr3_1:13754583-13754602 | None:intergenic | 35.0% | |
| GAGATATCAGCTGTGAAATT+CGG | + | chr3_1:13754584-13754603 | Msa0349710:CDS | 35.0% | |
| ACATACAAGATCAAATGAGG+TGG | - | chr3_1:13754726-13754745 | None:intergenic | 35.0% | |
| ACCTCATTTGATCTTGTATG+TGG | + | chr3_1:13754725-13754744 | Msa0349710:CDS | 35.0% | |
| ACCACATACAAGATCAAATG+AGG | - | chr3_1:13754729-13754748 | None:intergenic | 35.0% | |
| CCTCAATGATTAAGCAACTT+TGG | - | chr3_1:13754880-13754899 | None:intergenic | 35.0% | |
| CCAAAGTTGCTTAATCATTG+AGG | + | chr3_1:13754877-13754896 | Msa0349710:CDS | 35.0% | |
| !! | GTGAAAATTTTGAGGGATCA+TGG | + | chr3_1:13755067-13755086 | Msa0349710:CDS | 35.0% |
| GTTCTTAGATGAGAATAGGA+AGG | + | chr3_1:13755126-13755145 | Msa0349710:CDS | 35.0% | |
| AAAGACTTGACCTTGGTTAT+TGG | - | chr3_1:13755178-13755197 | None:intergenic | 35.0% | |
| AAATGACAAAGACTTGACCT+TGG | - | chr3_1:13755185-13755204 | None:intergenic | 35.0% | |
| AAGGTCAAGTCTTTGTCATT+TGG | + | chr3_1:13755184-13755203 | Msa0349710:CDS | 35.0% | |
| ! | AGGTCAAGTCTTTGTCATTT+GGG | + | chr3_1:13755185-13755204 | Msa0349710:CDS | 35.0% |
| ! | ATTTGAGATAATGGCTCAGA+AGG | + | chr3_1:13755249-13755268 | Msa0349710:CDS | 35.0% |
| ! | GAATTCCTCTTTTACATGAG+AGG | - | chr3_1:13755367-13755386 | None:intergenic | 35.0% |
| TGAAAGAGTCATGTATTCTC+TGG | + | chr3_1:13755440-13755459 | Msa0349710:intron | 35.0% | |
| ATCAACTAGATTGTAAGTGG+TGG | + | chr3_1:13755472-13755491 | Msa0349710:intron | 35.0% | |
| ATGTACTAAATGGCGTATCA+CGG | - | chr3_1:13755569-13755588 | None:intergenic | 35.0% | |
| CCAAAATCAGGAGTAAAATC+TGG | - | chr3_1:13755781-13755800 | None:intergenic | 35.0% | |
| ! | CCAGATTTTACTCCTGATTT+TGG | + | chr3_1:13755778-13755797 | Msa0349710:CDS | 35.0% |
| GGCAAAAACATGAACAGAAT+AGG | - | chr3_1:13755838-13755857 | None:intergenic | 35.0% | |
| !!! | CTTTTACGTTTCTGGTTTAG+TGG | + | chr3_1:13755990-13756009 | Msa0349710:intron | 35.0% |
| !! | GATCGTAAATTTGCTGACAT+TGG | + | chr3_1:13756075-13756094 | Msa0349710:CDS | 35.0% |
| AGATTCCTCATCTGTATCTA+AGG | + | chr3_1:13756164-13756183 | Msa0349710:intron | 35.0% | |
| GTAAATGCTCACATAATCTC+TGG | + | chr3_1:13756255-13756274 | Msa0349710:CDS | 35.0% | |
| ATGTTTCTTGAACCATACTC+AGG | + | chr3_1:13756388-13756407 | Msa0349710:intron | 35.0% | |
| TGTTTCTTGAACCATACTCA+GGG | + | chr3_1:13756389-13756408 | Msa0349710:intron | 35.0% | |
| GAACATTCCGACTTTGTAAT+TGG | + | chr3_1:13756512-13756531 | Msa0349710:CDS | 35.0% | |
| TAGACTGACAGTAACTCATT+TGG | + | chr3_1:13756743-13756762 | Msa0349710:intron | 35.0% | |
| AGTAACTCATTTGGACGAAA+AGG | + | chr3_1:13756752-13756771 | Msa0349710:intron | 35.0% | |
| GTAACTCATTTGGACGAAAA+GGG | + | chr3_1:13756753-13756772 | Msa0349710:intron | 35.0% | |
| TAACTCATTTGGACGAAAAG+GGG | + | chr3_1:13756754-13756773 | Msa0349710:intron | 35.0% | |
| ATATATGTATTAGCCCCTGA+AGG | - | chr3_1:13756893-13756912 | None:intergenic | 35.0% | |
| TCTTGGTTGTGTTATAGAGA+TGG | + | chr3_1:13757133-13757152 | Msa0349710:intron | 35.0% | |
| TCAACATTATAATGTACCCG+AGG | - | chr3_1:13757527-13757546 | None:intergenic | 35.0% | |
| ! | AAGTGGCTTTTTGATGTTCT+TGG | + | chr3_1:13757577-13757596 | Msa0349710:three_prime_UTR | 35.0% |
| ! | ACAAATGCAAGCATTGTTTG+AGG | + | chr3_1:13757652-13757671 | Msa0349710:three_prime_UTR | 35.0% |
| ATCGGATGCATGTGTAGAAA+AGG | + | chr3_1:13752943-13752962 | Msa0349710:intron | 40.0% | |
| !!! | AAAGTGGTTTTGTCGCTGTT+CGG | + | chr3_1:13753083-13753102 | Msa0349710:intron | 40.0% |
| TCTTTCAAACGTTGTGTGCT+TGG | - | chr3_1:13753463-13753482 | None:intergenic | 40.0% | |
| AGTGATGAAACTCGAGACAA+AGG | - | chr3_1:13753941-13753960 | None:intergenic | 40.0% | |
| TTCATCACTGTGGGTGTATT+TGG | + | chr3_1:13753952-13753971 | Msa0349710:intron | 40.0% | |
| TGAGGATGAATGCATCTATG+TGG | + | chr3_1:13754249-13754268 | Msa0349710:intron | 40.0% | |
| GAATGCATCTATGTGGTTTC+TGG | + | chr3_1:13754256-13754275 | Msa0349710:intron | 40.0% | |
| ATCATAACACTCCCACATCA+TGG | - | chr3_1:13754331-13754350 | None:intergenic | 40.0% | |
| TCATGCACACTGAATAACAC+AGG | + | chr3_1:13754460-13754479 | Msa0349710:intron | 40.0% | |
| ATCCCTGTAACACACTCAAA+AGG | + | chr3_1:13754497-13754516 | Msa0349710:five_prime_UTR | 40.0% | |
| TCCCTGTAACACACTCAAAA+GGG | + | chr3_1:13754498-13754517 | Msa0349710:five_prime_UTR | 40.0% | |
| !! | TCCCTTTTGAGTGTGTTACA+GGG | - | chr3_1:13754502-13754521 | None:intergenic | 40.0% |
| !! | TTCCCTTTTGAGTGTGTTAC+AGG | - | chr3_1:13754503-13754522 | None:intergenic | 40.0% |
| GGCAACTTTAAGCTCAAATC+TGG | + | chr3_1:13754605-13754624 | Msa0349710:CDS | 40.0% | |
| GATAAGATATGATGAGACGG+AGG | - | chr3_1:13754655-13754674 | None:intergenic | 40.0% | |
| GGAAGAGACAGAGGAAATTA+GGG | - | chr3_1:13754705-13754724 | None:intergenic | 40.0% | |
| TGGAAGAGACAGAGGAAATT+AGG | - | chr3_1:13754706-13754725 | None:intergenic | 40.0% | |
| CGTAAGGAAGTCAAAGACTA+CGG | + | chr3_1:13754818-13754837 | Msa0349710:CDS | 40.0% | |
| AGGCTTGAAATCACCTTCAA+TGG | - | chr3_1:13754855-13754874 | None:intergenic | 40.0% | |
| ATTGAAGGTGATTTCAAGCC+TGG | + | chr3_1:13754854-13754873 | Msa0349710:CDS | 40.0% | |
| ATGATTAAGCAACTTTGGCC+AGG | - | chr3_1:13754875-13754894 | None:intergenic | 40.0% | |
| ! | ATTGAGGATTTGGTTACCAG+TGG | + | chr3_1:13754893-13754912 | Msa0349710:CDS | 40.0% |
| ! | TACCAGTGGAACATCAGTTT+TGG | + | chr3_1:13754907-13754926 | Msa0349710:CDS | 40.0% |
| TTCCAAAACTGATGTTCCAC+TGG | - | chr3_1:13754912-13754931 | None:intergenic | 40.0% | |
| TGATTGATAGAGAGCAAGGT+GGG | + | chr3_1:13754984-13755003 | Msa0349710:CDS | 40.0% | |
| ! | GGTCAAGTCTTTGTCATTTG+GGG | + | chr3_1:13755186-13755205 | Msa0349710:CDS | 40.0% |
| ! | AGTCTTTGTCATTTGGGGAA+AGG | + | chr3_1:13755191-13755210 | Msa0349710:CDS | 40.0% |
| ! | GTCTTTGTCATTTGGGGAAA+GGG | + | chr3_1:13755192-13755211 | Msa0349710:CDS | 40.0% |
| AATCTGTCCAAGAATCCAAC+AGG | + | chr3_1:13755217-13755236 | Msa0349710:CDS | 40.0% | |
| CTTCTTTCCTGTTGGATTCT+TGG | - | chr3_1:13755227-13755246 | None:intergenic | 40.0% | |
| GAAGGAGAGTAATCTGTGTT+TGG | + | chr3_1:13755267-13755286 | Msa0349710:CDS | 40.0% | |
| ATTGCTTGAAATTGCCGAGA+AGG | + | chr3_1:13755315-13755334 | Msa0349710:CDS | 40.0% | |
| TGAAGCCTCTCATGTAAAAG+AGG | + | chr3_1:13755359-13755378 | Msa0349710:intron | 40.0% | |
| CTAGATTGTAAGTGGTGGTT+TGG | + | chr3_1:13755477-13755496 | Msa0349710:intron | 40.0% | |
| TTGTGAAATAGCAGCTAGAG+TGG | + | chr3_1:13755593-13755612 | Msa0349710:intron | 40.0% | |
| AGAAGCTTAGAGCCAAAATC+AGG | - | chr3_1:13755793-13755812 | None:intergenic | 40.0% | |
| !!! | TTTTGGCTCTAAGCTTCTCT+CGG | + | chr3_1:13755795-13755814 | Msa0349710:CDS | 40.0% |
| ACAGTAACCATGCAATATGC+AGG | + | chr3_1:13756102-13756121 | Msa0349710:CDS | 40.0% | |
| CAGTAACCATGCAATATGCA+GGG | + | chr3_1:13756103-13756122 | Msa0349710:CDS | 40.0% | |
| ACTATACCCTGCATATTGCA+TGG | - | chr3_1:13756112-13756131 | None:intergenic | 40.0% | |
| !! | ATTGGCCTTAGATACAGATG+AGG | - | chr3_1:13756172-13756191 | None:intergenic | 40.0% |
| !! | CGTGGATGGACTAAAATTGA+AGG | + | chr3_1:13756287-13756306 | Msa0349710:CDS | 40.0% |
| TGCTGCATTGAAAATTGCTG+AGG | + | chr3_1:13756490-13756509 | Msa0349710:CDS | 40.0% | |
| CTGATCTTAAGATGGTACAG+TGG | - | chr3_1:13756792-13756811 | None:intergenic | 40.0% | |
| ACCATCTTAAGATCAGACAG+AGG | + | chr3_1:13756796-13756815 | Msa0349710:intron | 40.0% | |
| TTAAGATCAGACAGAGGCTT+AGG | + | chr3_1:13756802-13756821 | Msa0349710:intron | 40.0% | |
| TTAAGATAGTCTGGTCCTTC+AGG | + | chr3_1:13756875-13756894 | Msa0349710:intron | 40.0% | |
| TAAGATAGTCTGGTCCTTCA+GGG | + | chr3_1:13756876-13756895 | Msa0349710:intron | 40.0% | |
| ! | TAATGTCACTTCCTCTATCG+TGG | - | chr3_1:13757317-13757336 | None:intergenic | 40.0% |
| GGAAGTGACATTATCATCGT+TGG | + | chr3_1:13757324-13757343 | Msa0349710:CDS | 40.0% | |
| CCAAATATGCATTCCATCCT+TGG | - | chr3_1:13757404-13757423 | None:intergenic | 40.0% | |
| CCAAGGATGGAATGCATATT+TGG | + | chr3_1:13757401-13757420 | Msa0349710:CDS | 40.0% | |
| ATGCAGATCTCAAGCAGATT+TGG | - | chr3_1:13757427-13757446 | None:intergenic | 40.0% | |
| CTAATTTCACTGTAACCCAG+AGG | + | chr3_1:13757497-13757516 | Msa0349710:three_prime_UTR | 40.0% | |
| GTACCTCGGTTGAAGCAAAA+CGG | - | chr3_1:13752679-13752698 | None:intergenic | 45.0% | |
| TAACAGAGAGAGAGAGAGAG+AGG | - | chr3_1:13752701-13752720 | None:intergenic | 45.0% | |
| TGTCTGAGTCTGTGCTTCAT+AGG | + | chr3_1:13752920-13752939 | Msa0349710:intron | 45.0% | |
| GAGTCTGTGCTTCATAGGAT+CGG | + | chr3_1:13752925-13752944 | Msa0349710:intron | 45.0% | |
| !!! | AAGTGGTTTTGTCGCTGTTC+GGG | + | chr3_1:13753084-13753103 | Msa0349710:intron | 45.0% |
| !!! | CTTTTTCTGAGGTGTAGCTC+TGG | + | chr3_1:13753695-13753714 | Msa0349710:intron | 45.0% |
| TGTCTCGAGTTTCATCACTG+TGG | + | chr3_1:13753942-13753961 | Msa0349710:intron | 45.0% | |
| GTCTCGAGTTTCATCACTGT+GGG | + | chr3_1:13753943-13753962 | Msa0349710:intron | 45.0% | |
| ! | TGGTGAAATGGGGAAGTGTA+TGG | + | chr3_1:13754032-13754051 | Msa0349710:intron | 45.0% |
| GCTGAAGTTGCAGAGAATTG+AGG | + | chr3_1:13754231-13754250 | Msa0349710:intron | 45.0% | |
| AGACGGAGGTCAATGTAGAT+TGG | - | chr3_1:13754641-13754660 | None:intergenic | 45.0% | |
| AAATGAGGTGGAAGAGACAG+AGG | - | chr3_1:13754714-13754733 | None:intergenic | 45.0% | |
| CAATGGGTAAGGCAGTGTAA+GGG | - | chr3_1:13754754-13754773 | None:intergenic | 45.0% | |
| AGAGAGACACATGTGGCAAT+GGG | - | chr3_1:13754770-13754789 | None:intergenic | 45.0% | |
| AAGAGAGACACATGTGGCAA+TGG | - | chr3_1:13754771-13754790 | None:intergenic | 45.0% | |
| GTCCTGATTGATAGAGAGCA+AGG | + | chr3_1:13754980-13754999 | Msa0349710:CDS | 45.0% | |
| CACCTTGCTCTCTATCAATC+AGG | - | chr3_1:13754985-13755004 | None:intergenic | 45.0% | |
| CTGATTGATAGAGAGCAAGG+TGG | + | chr3_1:13754983-13755002 | Msa0349710:CDS | 45.0% | |
| CGGGAAAATTTGGAGGAGAA+TGG | + | chr3_1:13755007-13755026 | Msa0349710:CDS | 45.0% | |
| !! | TGGAAGACTTGATGACGAGA+TGG | + | chr3_1:13755087-13755106 | Msa0349710:CDS | 45.0% |
| !! | AGACTTGATGACGAGATGGT+AGG | + | chr3_1:13755091-13755110 | Msa0349710:CDS | 45.0% |
| !! | GACTTGATGACGAGATGGTA+GGG | + | chr3_1:13755092-13755111 | Msa0349710:CDS | 45.0% |
| !! | ACTTGATGACGAGATGGTAG+GGG | + | chr3_1:13755093-13755112 | Msa0349710:CDS | 45.0% |
| GGTTGAGAAGCCAATAACCA+AGG | + | chr3_1:13755165-13755184 | Msa0349710:CDS | 45.0% | |
| !! | GCTATAGCAGTGTTGCTTAG+CGG | + | chr3_1:13755617-13755636 | Msa0349710:intron | 45.0% |
| TTGCAGATCGCGGAAAATAG+CGG | - | chr3_1:13755655-13755674 | None:intergenic | 45.0% | |
| TTCCGCGATCTGCAATTGTT+TGG | + | chr3_1:13755660-13755679 | Msa0349710:intron | 45.0% | |
| GTCTTCAGCAAGCATATCTC+AGG | - | chr3_1:13755742-13755761 | None:intergenic | 45.0% | |
| ! | ATGCTTGCTGAAGACTCATG+TGG | + | chr3_1:13755747-13755766 | Msa0349710:CDS | 45.0% |
| TTTAGTCCATCCACGATTCC+AGG | - | chr3_1:13756282-13756301 | None:intergenic | 45.0% | |
| CTTGCTGAAATGAGTTCAGC+CGG | + | chr3_1:13756440-13756459 | Msa0349710:CDS | 45.0% | |
| CAGTATAATCTCCCTTGGCA+AGG | - | chr3_1:13756469-13756488 | None:intergenic | 45.0% | |
| AGCAGCAGTATAATCTCCCT+TGG | - | chr3_1:13756474-13756493 | None:intergenic | 45.0% | |
| TATCCGTCAATCCAGCATCA+TGG | + | chr3_1:13756540-13756559 | Msa0349710:CDS | 45.0% | |
| GGAGTTGCCTGAATGAAAGA+AGG | - | chr3_1:13756584-13756603 | None:intergenic | 45.0% | |
| TCTTTCATTCAGGCAACTCC+TGG | + | chr3_1:13756584-13756603 | Msa0349710:CDS | 45.0% | |
| GCCTCTGTCTGATCTTAAGA+TGG | - | chr3_1:13756800-13756819 | None:intergenic | 45.0% | |
| AAGATAGTCTGGTCCTTCAG+GGG | + | chr3_1:13756877-13756896 | Msa0349710:intron | 45.0% | |
| GACATTATCATCGTTGGACG+TGG | + | chr3_1:13757330-13757349 | Msa0349710:CDS | 45.0% | |
| ATGAATACCGTGTCCAAGGA+TGG | + | chr3_1:13757388-13757407 | Msa0349710:CDS | 45.0% | |
| ATGCATTCCATCCTTGGACA+CGG | - | chr3_1:13757398-13757417 | None:intergenic | 45.0% | |
| TTTCACTGTAACCCAGAGGA+AGG | + | chr3_1:13757501-13757520 | Msa0349710:three_prime_UTR | 45.0% | |
| TACTGAGGTCGAGTGTTCAC+TGG | - | chr3_1:13752605-13752624 | None:intergenic | 50.0% | |
| GAGAGGGTAGTGAGTTACTG+AGG | - | chr3_1:13752620-13752639 | None:intergenic | 50.0% | |
| GTTGAAGCAAAACGGAGCTG+CGG | - | chr3_1:13752671-13752690 | None:intergenic | 50.0% | |
| !! | AGAGAGAGAGAGAGGTACCT+CGG | - | chr3_1:13752693-13752712 | None:intergenic | 50.0% |
| !!! | AGTGGTTTTGTCGCTGTTCG+GGG | + | chr3_1:13753085-13753104 | Msa0349710:intron | 50.0% |
| CGTAACAAACCGGACACCTA+GGG | - | chr3_1:13753314-13753333 | None:intergenic | 50.0% | |
| !! | CCTAGGTGTCCGGTTTGTTA+CGG | + | chr3_1:13753312-13753331 | Msa0349710:intron | 50.0% |
| TCACTGTGGGTGTATTTGGC+AGG | + | chr3_1:13753956-13753975 | Msa0349710:intron | 50.0% | |
| GGACATGGCGTCATCATCAT+TGG | + | chr3_1:13754535-13754554 | Msa0349710:exon | 50.0% | |
| !! | GAGATTTGCTGGAGGAGAGA+AGG | - | chr3_1:13754677-13754696 | None:intergenic | 50.0% |
| TTAGGGTCTGCGAGATTTGC+TGG | - | chr3_1:13754688-13754707 | None:intergenic | 50.0% | |
| GCAATGGGTAAGGCAGTGTA+AGG | - | chr3_1:13754755-13754774 | None:intergenic | 50.0% | |
| GACACATGTGGCAATGGGTA+AGG | - | chr3_1:13754765-13754784 | None:intergenic | 50.0% | |
| CTGAGCAAGAGAGACACATG+TGG | - | chr3_1:13754777-13754796 | None:intergenic | 50.0% | |
| ! | TCTTGCTCAGAGTATCCCCA+TGG | + | chr3_1:13754787-13754806 | Msa0349710:CDS | 50.0% |
| TCCTTACGACGCATGACCAT+GGG | - | chr3_1:13754806-13754825 | None:intergenic | 50.0% | |
| TTCCTTACGACGCATGACCA+TGG | - | chr3_1:13754807-13754826 | None:intergenic | 50.0% | |
| GGCACTGCTAAAGCCATTGA+AGG | + | chr3_1:13754839-13754858 | Msa0349710:CDS | 50.0% | |
| TTCAACCCCACAGAACGTAG+TGG | - | chr3_1:13754944-13754963 | None:intergenic | 50.0% | |
| TTGATAGAGAGCAAGGTGGG+CGG | + | chr3_1:13754987-13755006 | Msa0349710:CDS | 50.0% | |
| GAATAGGAAGGTTGCAGCTG+TGG | + | chr3_1:13755138-13755157 | Msa0349710:CDS | 50.0% | |
| CTGTGTTTGGCTGCAGATGT+TGG | + | chr3_1:13755280-13755299 | Msa0349710:CDS | 50.0% | |
| GGCGTATCACGGAACAATAG+TGG | - | chr3_1:13755558-13755577 | None:intergenic | 50.0% | |
| GGCCAAACAATTGCAGATCG+CGG | - | chr3_1:13755665-13755684 | None:intergenic | 50.0% | |
| GCTCACATAATCTCTGGTCC+TGG | + | chr3_1:13756261-13756280 | Msa0349710:CDS | 50.0% | |
| AATCTCTGGTCCTGGAATCG+TGG | + | chr3_1:13756269-13756288 | Msa0349710:CDS | 50.0% | |
| ATCTCCCTTGGCAAGGTTAC+CGG | - | chr3_1:13756462-13756481 | None:intergenic | 50.0% | |
| TGGCCATGATGCTGGATTGA+CGG | - | chr3_1:13756546-13756565 | None:intergenic | 50.0% | |
| TCAATCCAGCATCATGGCCA+GGG | + | chr3_1:13756546-13756565 | Msa0349710:CDS | 50.0% | |
| GGCAACTCCTGGAGTTCAAA+TGG | + | chr3_1:13756595-13756614 | Msa0349710:CDS | 50.0% | |
| CCAGTCACCATTTGAACTCC+AGG | - | chr3_1:13756605-13756624 | None:intergenic | 50.0% | |
| CCTGGAGTTCAAATGGTGAC+TGG | + | chr3_1:13756602-13756621 | Msa0349710:CDS | 50.0% | |
| GGAGTTCAAATGGTGACTGG+TGG | + | chr3_1:13756605-13756624 | Msa0349710:CDS | 50.0% | |
| ! | TGACTGGTGGCGATGGTTTA+GGG | + | chr3_1:13756618-13756637 | Msa0349710:CDS | 50.0% |
| GACGAAAAGGGGTAAGAGAC+AGG | + | chr3_1:13756765-13756784 | Msa0349710:intron | 50.0% | |
| GATCAGACAGAGGCTTAGGT+AGG | + | chr3_1:13756806-13756825 | Msa0349710:intron | 50.0% | |
| TATTCATGAGCTGCCTCAGC+AGG | - | chr3_1:13757375-13757394 | None:intergenic | 50.0% | |
| GCTCATGAATACCGTGTCCA+AGG | + | chr3_1:13757384-13757403 | Msa0349710:CDS | 50.0% | |
| ! | GCTCCGTTTTGCTTCAACCG+AGG | + | chr3_1:13752673-13752692 | Msa0349710:intron | 55.0% |
| GTTCGGGGACGTGTTTGGAT+TGG | + | chr3_1:13753100-13753119 | Msa0349710:intron | 55.0% | |
| CCGTAACAAACCGGACACCT+AGG | - | chr3_1:13753315-13753334 | None:intergenic | 55.0% | |
| CCTTACGACGCATGACCATG+GGG | - | chr3_1:13754805-13754824 | None:intergenic | 55.0% | |
| AGCTGCACCACTACGTTCTG+TGG | + | chr3_1:13754934-13754953 | Msa0349710:CDS | 55.0% | |
| GCTGCACCACTACGTTCTGT+GGG | + | chr3_1:13754935-13754954 | Msa0349710:CDS | 55.0% | |
| CTGCACCACTACGTTCTGTG+GGG | + | chr3_1:13754936-13754955 | Msa0349710:CDS | 55.0% | |
| GGGGTTGAAGATCAGTGACG+CGG | + | chr3_1:13754955-13754974 | Msa0349710:CDS | 55.0% | |
| TGATAGAGAGCAAGGTGGGC+GGG | + | chr3_1:13754988-13755007 | Msa0349710:CDS | 55.0% | |
| GCAAGGTGGGCGGGAAAATT+TGG | + | chr3_1:13754997-13755016 | Msa0349710:CDS | 55.0% | |
| AGGTGGGCGGGAAAATTTGG+AGG | + | chr3_1:13755000-13755019 | Msa0349710:CDS | 55.0% | |
| GAAGGTTGCAGCTGTGGCAA+AGG | + | chr3_1:13755144-13755163 | Msa0349710:CDS | 55.0% | |
| TCTGGTCCTGGAATCGTGGA+TGG | + | chr3_1:13756273-13756292 | Msa0349710:CDS | 55.0% | |
| CACGAGGCAAACCCTGAGTA+TGG | - | chr3_1:13756403-13756422 | None:intergenic | 55.0% | |
| CATACTCAGGGTTTGCCTCG+TGG | + | chr3_1:13756401-13756420 | Msa0349710:intron | 55.0% | |
| TCAGGGTTTGCCTCGTGGTA+GGG | + | chr3_1:13756406-13756425 | Msa0349710:intron | 55.0% | |
| AGCAATAGTCCCCTACCACG+AGG | - | chr3_1:13756419-13756438 | None:intergenic | 55.0% | |
| TTCAGCCGGTAACCTTGCCA+AGG | + | chr3_1:13756454-13756473 | Msa0349710:CDS | 55.0% | |
| TCAGCCGGTAACCTTGCCAA+GGG | + | chr3_1:13756455-13756474 | Msa0349710:CDS | 55.0% | |
| GTCAATCCAGCATCATGGCC+AGG | + | chr3_1:13756545-13756564 | Msa0349710:CDS | 55.0% | |
| CAATCCAGCATCATGGCCAG+GGG | + | chr3_1:13756547-13756566 | Msa0349710:CDS | 55.0% | |
| GAAGGATTTATGGGTGCCCC+TGG | - | chr3_1:13756566-13756585 | None:intergenic | 55.0% | |
| ! | CAAATGGTGACTGGTGGCGA+TGG | + | chr3_1:13756611-13756630 | Msa0349710:CDS | 55.0% |
| ! | GTGACTGGTGGCGATGGTTT+AGG | + | chr3_1:13756617-13756636 | Msa0349710:CDS | 55.0% |
| TTCCAGGTCGTCCACGATAG+AGG | + | chr3_1:13757303-13757322 | Msa0349710:intron | 55.0% | |
| TTCCTCTATCGTGGACGACC+TGG | - | chr3_1:13757308-13757327 | None:intergenic | 55.0% | |
| CGTTGGACGTGGCATCATCA+AGG | + | chr3_1:13757341-13757360 | Msa0349710:CDS | 55.0% | |
| CAAGGCAGCAAATCCTGCTG+AGG | + | chr3_1:13757359-13757378 | Msa0349710:CDS | 55.0% | |
| TGTAACCCAGAGGAAGGCCT+CGG | + | chr3_1:13757507-13757526 | Msa0349710:three_prime_UTR | 55.0% | |
| GCTGCGGCGGAGATGATCAA+CGG | - | chr3_1:13752655-13752674 | None:intergenic | 60.0% | |
| GAAGCAAAACGGAGCTGCGG+CGG | - | chr3_1:13752668-13752687 | None:intergenic | 60.0% | |
| TCGCTGTTCGGGGACGTGTT+TGG | + | chr3_1:13753095-13753114 | Msa0349710:intron | 60.0% | |
| AGCCAATCCAAACGGGCCCT+AGG | + | chr3_1:13753295-13753314 | Msa0349710:intron | 60.0% | |
| CACCTAGGGCCCGTTTGGAT+TGG | - | chr3_1:13753300-13753319 | None:intergenic | 60.0% | |
| !! | GGGTCTGCGAGATTTGCTGG+AGG | - | chr3_1:13754685-13754704 | None:intergenic | 60.0% |
| CCCCATGGTCATGCGTCGTA+AGG | + | chr3_1:13754802-13754821 | Msa0349710:CDS | 60.0% | |
| CTCAGGGTTTGCCTCGTGGT+AGG | + | chr3_1:13756405-13756424 | Msa0349710:intron | 60.0% | |
| CAGGGTTTGCCTCGTGGTAG+GGG | + | chr3_1:13756407-13756426 | Msa0349710:intron | 60.0% | |
| GTAACCCAGAGGAAGGCCTC+GGG | + | chr3_1:13757508-13757527 | Msa0349710:three_prime_UTR | 60.0% | |
| TGTACCCGAGGCCTTCCTCT+GGG | - | chr3_1:13757515-13757534 | None:intergenic | 60.0% | |
| ATGTACCCGAGGCCTTCCTC+TGG | - | chr3_1:13757516-13757535 | None:intergenic | 60.0% | |
| GCGGAGATGATCAACGGCGG+CGG | - | chr3_1:13752649-13752668 | None:intergenic | 65.0% | |
| GCGGCGGAGATGATCAACGG+CGG | - | chr3_1:13752652-13752671 | None:intergenic | 65.0% | |
| CCAAACGGGCCCTAGGTGTC+CGG | + | chr3_1:13753302-13753321 | Msa0349710:intron | 65.0% | |
| GATGATCAACGGCGGCGGCG+CGG | - | chr3_1:13752644-13752663 | None:intergenic | 70.0% | |
| CCGGACACCTAGGGCCCGTT+TGG | - | chr3_1:13753305-13753324 | None:intergenic | 70.0% | |
| GGTGCCCCTGGCCATGATGC+TGG | - | chr3_1:13756554-13756573 | None:intergenic | 70.0% | |
| ! | ACGGCGGCGGCGCGGAGAGA+GGG | - | chr3_1:13752636-13752655 | None:intergenic | 80.0% |
| ! | AACGGCGGCGGCGCGGAGAG+AGG | - | chr3_1:13752637-13752656 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 13752588 | 13757735 | 13752588 | ID=Msa0349710;Name=Msa0349710 |
| chr3_1 | mRNA | 13752588 | 13757735 | 13752588 | ID=Msa0349710-mRNA-1;Parent=Msa0349710;Name=Msa0349710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=144|1|1|1|0.71|0.62|8|298|478 |
| chr3_1 | exon | 13752588 | 13752653 | 13752588 | ID=Msa0349710-mRNA-1:exon:3423;Parent=Msa0349710-mRNA-1 |
| chr3_1 | exon | 13752674 | 13752694 | 13752674 | ID=Msa0349710-mRNA-1:exon:3424;Parent=Msa0349710-mRNA-1 |
| chr3_1 | exon | 13754482 | 13755336 | 13754482 | ID=Msa0349710-mRNA-1:exon:3425;Parent=Msa0349710-mRNA-1 |
| chr3_1 | exon | 13755733 | 13755816 | 13755733 | ID=Msa0349710-mRNA-1:exon:3426;Parent=Msa0349710-mRNA-1 |
| chr3_1 | exon | 13756042 | 13756124 | 13756042 | ID=Msa0349710-mRNA-1:exon:3427;Parent=Msa0349710-mRNA-1 |
| chr3_1 | exon | 13756221 | 13756308 | 13756221 | ID=Msa0349710-mRNA-1:exon:3428;Parent=Msa0349710-mRNA-1 |
| chr3_1 | exon | 13756410 | 13756664 | 13756410 | ID=Msa0349710-mRNA-1:exon:3429;Parent=Msa0349710-mRNA-1 |
| chr3_1 | exon | 13757309 | 13757735 | 13757309 | ID=Msa0349710-mRNA-1:exon:3430;Parent=Msa0349710-mRNA-1 |
| chr3_1 | five_prime_UTR | 13752588 | 13752653 | 13752588 | ID=Msa0349710-mRNA-1:five_prime_utr;Parent=Msa0349710-mRNA-1 |
| chr3_1 | five_prime_UTR | 13752674 | 13752694 | 13752674 | ID=Msa0349710-mRNA-1:five_prime_utr;Parent=Msa0349710-mRNA-1 |
| chr3_1 | five_prime_UTR | 13754482 | 13754538 | 13754482 | ID=Msa0349710-mRNA-1:five_prime_utr;Parent=Msa0349710-mRNA-1 |
| chr3_1 | CDS | 13754539 | 13755336 | 13754539 | ID=Msa0349710-mRNA-1:cds;Parent=Msa0349710-mRNA-1 |
| chr3_1 | CDS | 13755733 | 13755816 | 13755733 | ID=Msa0349710-mRNA-1:cds;Parent=Msa0349710-mRNA-1 |
| chr3_1 | CDS | 13756042 | 13756124 | 13756042 | ID=Msa0349710-mRNA-1:cds;Parent=Msa0349710-mRNA-1 |
| chr3_1 | CDS | 13756221 | 13756308 | 13756221 | ID=Msa0349710-mRNA-1:cds;Parent=Msa0349710-mRNA-1 |
| chr3_1 | CDS | 13756410 | 13756664 | 13756410 | ID=Msa0349710-mRNA-1:cds;Parent=Msa0349710-mRNA-1 |
| chr3_1 | CDS | 13757309 | 13757437 | 13757309 | ID=Msa0349710-mRNA-1:cds;Parent=Msa0349710-mRNA-1 |
| chr3_1 | three_prime_UTR | 13757438 | 13757735 | 13757438 | ID=Msa0349710-mRNA-1:three_prime_utr;Parent=Msa0349710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
