AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0215820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0215820 MtrunA17_Chr2g0317161 84.082 490 28 1 52 491 1 490 0.0 781
Msa0215820 MtrunA17_Chr2g0317171 83.878 490 24 2 57 491 7 496 0.0 769
Msa0215820 MtrunA17_Chr2g0317131 72.709 491 72 2 52 480 1 491 0.0 666
Msa0215820 MtrunA17_Chr2g0317151 73.444 482 74 3 52 480 1 481 0.0 666
Msa0215820 MtrunA17_Chr2g0317221 75.682 403 48 1 138 490 7 409 0.0 564
Msa0215820 MtrunA17_Chr6g0483381 36.596 470 243 5 69 486 14 480 7.06e-98 303
Msa0215820 MtrunA17_Chr6g0483361 35.729 473 242 5 64 484 14 476 5.71e-97 301
Msa0215820 MtrunA17_Chr8g0392601 36.842 437 226 1 79 465 9 445 1.19e-93 292
Msa0215820 MtrunA17_Chr6g0477961 35.593 472 245 4 69 486 14 480 5.70e-89 280
Msa0215820 MtrunA17_Chr1g0208791 35.092 436 231 2 81 465 42 476 1.36e-88 280
Msa0215820 MtrunA17_Chr6g0483341 33.480 454 248 4 82 484 41 491 1.01e-86 275
Msa0215820 MtrunA17_Chr1g0208821 34.279 458 251 2 59 466 18 475 5.19e-84 268
Msa0215820 MtrunA17_Chr6g0483331 32.895 456 252 3 82 486 12 464 3.64e-82 262
Msa0215820 MtrunA17_Chr7g0251331 33.925 451 246 2 67 465 9 459 1.88e-79 256
Msa0215820 MtrunA17_Chr6g0483351 36.340 377 188 2 141 465 1 377 2.15e-78 251
Msa0215820 MtrunA17_Chr6g0483161 38.547 358 189 2 139 465 1 358 2.84e-78 249
Msa0215820 MtrunA17_Chr4g0024501 32.883 444 246 3 85 476 65 508 1.50e-75 246
Msa0215820 MtrunA17_Chr1g0208881 34.793 434 233 3 82 465 25 458 1.37e-72 238
Msa0215820 MtrunA17_Chr2g0322671 31.929 451 249 2 83 475 53 503 2.97e-72 237
Msa0215820 MtrunA17_Chr1g0208891 31.373 459 263 4 57 465 1 457 2.39e-68 226
Msa0215820 MtrunA17_Chr6g0449061 30.275 436 253 2 81 465 29 464 2.00e-66 221
Msa0215820 MtrunA17_Chr5g0442331 32.579 442 245 4 73 463 38 477 3.00e-65 219
Msa0215820 MtrunA17_Chr7g0254511 31.567 453 252 3 63 465 17 461 2.50e-63 213
Msa0215820 MtrunA17_Chr2g0288281 31.606 386 214 1 141 476 1 386 5.41e-63 209
Msa0215820 MtrunA17_Chr5g0412771 27.803 446 270 3 81 475 55 499 3.74e-58 200
Msa0215820 MtrunA17_Chr1g0202761 30.751 426 241 3 91 465 52 474 4.74e-58 200
Msa0215820 MtrunA17_Chr7g0254521 30.562 445 250 4 72 465 27 463 6.08e-57 196
Msa0215820 MtrunA17_Chr7g0251321 30.728 371 223 3 141 478 1 370 3.53e-55 189
Msa0215820 MtrunA17_Chr8g0368001 27.356 435 265 2 81 465 49 482 9.75e-55 191
Msa0215820 MtrunA17_Chr5g0412541 29.252 441 254 4 93 476 47 486 1.99e-52 184
Msa0215820 MtrunA17_Chr7g0254531 33.511 376 197 4 141 465 1 374 1.71e-50 177
Msa0215820 MtrunA17_Chr1g0203791 28.276 435 256 7 91 472 73 504 2.25e-50 180
Msa0215820 MtrunA17_Chr5g0397991 27.891 441 260 6 79 465 62 498 7.22e-50 179
Msa0215820 MtrunA17_Chr6g0473701 27.313 454 267 7 82 476 128 577 3.09e-49 178
Msa0215820 MtrunA17_Chr4g0025551 60.335 179 48 6 160 338 1 156 4.56e-49 166
Msa0215820 MtrunA17_Chr3g0132541 28.271 428 283 5 52 465 1 418 4.85e-49 174
Msa0215820 MtrunA17_Chr6g0468531 29.864 442 250 7 75 465 30 462 1.05e-48 174
Msa0215820 MtrunA17_Chr6g0468521 29.688 448 246 8 80 465 21 461 2.48e-47 171
Msa0215820 MtrunA17_Chr8g0389801 27.714 433 261 4 81 463 22 452 3.12e-45 164
Msa0215820 MtrunA17_Chr3g0132531 27.802 464 273 7 55 465 25 479 4.43e-45 165
Msa0215820 MtrunA17_Chr7g0248051 31.264 435 247 2 81 465 69 501 4.88e-45 165
Msa0215820 MtrunA17_Chr5g0428251 26.087 483 299 7 46 475 18 495 1.76e-44 164
Msa0215820 MtrunA17_Chr3g0140931 25.647 464 285 7 57 465 26 484 1.91e-44 164
Msa0215820 MtrunA17_Chr6g0468511 30.787 445 245 7 80 465 21 461 5.05e-44 161
Msa0215820 MtrunA17_Chr4g0013031 26.496 468 279 6 79 484 59 523 2.21e-43 160
Msa0215820 MtrunA17_Chr1g0154441 28.533 375 217 2 141 465 1 374 3.33e-43 157
Msa0215820 MtrunA17_Chr6g0460541 30.504 377 210 2 139 465 3 377 2.87e-42 155
Msa0215820 MtrunA17_Chr2g0317211 74.468 94 18 1 52 139 1 94 8.03e-41 142
Msa0215820 MtrunA17_Chr6g0483241 39.227 181 110 0 139 319 1 181 3.93e-40 142
Msa0215820 MtrunA17_Chr5g0440661 29.969 327 210 5 141 462 1 313 1.76e-39 145
Msa0215820 MtrunA17_Chr5g0412571 29.765 383 207 6 139 465 38 414 2.66e-38 145
Msa0215820 MtrunA17_Chr8g0364761 32.812 256 171 1 95 349 66 321 4.37e-38 142
Msa0215820 MtrunA17_Chr6g0467321 24.169 451 283 5 81 472 41 491 1.13e-34 136
Msa0215820 MtrunA17_Chr7g0254501 30.345 290 150 2 226 465 2 289 2.32e-34 131
Msa0215820 MtrunA17_Chr6g0460531 28.794 257 173 3 64 319 13 260 5.96e-23 98.2
Msa0215820 MtrunA17_Chr2g0295631 22.026 454 288 6 81 468 19 472 7.08e-22 98.6
Msa0215820 MtrunA17_Chr8g0364751 40.678 118 63 1 368 485 69 179 1.76e-19 86.3
Msa0215820 MtrunA17_Chr5g0442311 28.492 179 128 0 141 319 1 179 5.98e-19 84.7
Msa0215820 MtrunA17_Chr6g0483221 32.215 149 81 2 337 465 5 153 5.70e-18 81.6
Msa0215820 MtrunA17_Chr6g0483264 29.231 195 88 3 321 465 1 195 1.27e-16 79.0
Msa0215820 MtrunA17_Chr7g0254491 35.455 110 64 1 59 168 14 116 1.13e-15 73.2
Msa0215820 MtrunA17_Chr6g0460521 30.303 198 88 1 318 465 1 198 2.66e-15 75.5
Msa0215820 MtrunA17_Chr6g0483261 30.464 151 85 1 335 465 3 153 3.18e-13 68.2
Msa0215820 MtrunA17_Chr5g0398551 34.118 85 56 0 77 161 38 122 4.64e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0215820 AT3G23550.1 52.489 442 160 1 76 467 24 465 1.92e-160 463
Msa0215820 AT3G23560.1 52.027 444 163 1 76 469 32 475 3.60e-160 463
Msa0215820 AT3G23560.2 50.670 373 134 1 76 398 32 404 1.41e-125 372
Msa0215820 AT1G73700.1 37.168 452 226 2 82 475 23 474 4.01e-88 278
Msa0215820 AT5G52450.1 37.558 434 221 2 82 465 25 458 8.75e-86 272
Msa0215820 AT2G34360.1 36.322 435 219 4 82 465 26 453 1.11e-85 272
Msa0215820 AT2G34360.2 36.453 406 237 3 71 465 16 411 2.36e-82 262
Msa0215820 AT1G15150.1 34.490 461 248 4 57 463 1 461 6.03e-82 263
Msa0215820 AT1G66760.1 34.292 452 241 3 64 465 15 460 1.04e-78 253
Msa0215820 AT1G66760.2 33.691 466 252 4 64 478 15 474 1.15e-78 254
Msa0215820 AT1G15160.1 33.188 458 253 3 61 465 6 463 4.50e-77 250
Msa0215820 AT1G15170.1 34.490 461 246 4 69 476 17 474 7.22e-76 246
Msa0215820 AT1G11670.1 31.081 444 256 1 83 476 50 493 2.49e-75 246
Msa0215820 AT2G04040.1 32.671 453 247 5 83 484 27 472 1.56e-73 240
Msa0215820 AT3G59030.1 32.377 488 264 6 58 484 16 498 5.23e-73 240
Msa0215820 AT2G04070.1 31.938 454 252 3 68 465 7 459 7.52e-72 236
Msa0215820 AT1G61890.1 29.730 444 262 1 83 476 47 490 2.45e-71 235
Msa0215820 AT1G61890.2 29.139 453 268 2 63 465 30 479 1.37e-70 233
Msa0215820 AT4G21903.1 32.941 425 226 4 110 476 80 503 2.24e-70 233
Msa0215820 AT4G21910.2 31.416 452 253 3 83 478 57 507 3.43e-70 232
Msa0215820 AT4G21910.4 31.416 452 253 3 83 478 57 507 3.43e-70 232
Msa0215820 AT4G21903.2 33.498 406 219 3 110 465 80 484 7.64e-70 232
Msa0215820 AT4G21910.3 31.195 452 254 3 83 478 55 505 1.06e-69 231
Msa0215820 AT4G21910.1 31.195 452 254 3 83 478 55 505 1.06e-69 231
Msa0215820 AT3G21690.1 30.856 444 255 3 85 476 52 495 1.32e-69 231
Msa0215820 AT2G04080.1 30.819 464 263 5 72 484 16 472 4.31e-69 229
Msa0215820 AT2G04080.2 31.626 449 247 4 72 465 16 459 7.27e-69 228
Msa0215820 AT2G04050.1 31.910 445 251 3 72 465 16 459 7.54e-69 228
Msa0215820 AT2G04100.2 32.258 434 242 5 83 465 30 462 4.85e-68 226
Msa0215820 AT2G04100.1 32.143 448 249 6 83 479 30 473 5.67e-68 226
Msa0215820 AT1G71140.1 30.805 435 251 1 81 465 24 458 1.72e-67 224
Msa0215820 AT1G15180.1 32.636 478 261 5 57 476 1 475 3.29e-66 221
Msa0215820 AT2G04090.1 31.151 443 251 5 74 465 23 462 1.40e-65 219
Msa0215820 AT4G21903.3 32.234 394 209 3 141 476 1 394 1.09e-63 212
Msa0215820 AT1G66780.1 29.792 433 251 3 102 484 54 483 1.05e-62 212
Msa0215820 AT1G61890.3 28.471 425 251 2 63 437 30 451 7.76e-62 209
Msa0215820 AT1G33090.1 30.579 484 279 3 58 491 17 493 9.04e-62 210
Msa0215820 AT1G47530.1 30.889 450 259 3 66 465 19 466 2.87e-61 208
Msa0215820 AT1G64820.1 29.252 441 245 6 93 476 39 469 3.13e-61 209
Msa0215820 AT1G33100.1 31.172 478 272 3 64 491 20 490 2.15e-60 206
Msa0215820 AT1G33110.1 29.545 484 284 3 58 491 17 493 3.35e-60 206
Msa0215820 AT1G66760.4 37.255 306 186 1 64 369 15 314 6.63e-60 202
Msa0215820 AT1G15170.2 33.621 348 178 3 179 476 11 355 2.68e-57 194
Msa0215820 AT1G15150.2 33.241 361 190 3 179 488 11 371 3.08e-57 194
Msa0215820 AT1G23300.1 28.913 460 268 5 83 484 44 502 1.90e-56 196
Msa0215820 AT1G33080.1 29.821 446 256 3 70 465 29 467 4.83e-55 192
Msa0215820 AT1G33080.2 29.821 446 256 3 70 465 29 467 7.09e-55 191
Msa0215820 AT3G26590.1 27.027 444 272 5 83 475 45 487 8.26e-55 191
Msa0215820 AT4G00350.1 27.719 469 286 3 47 465 53 518 3.91e-54 191
Msa0215820 AT1G12950.1 27.964 447 264 6 83 475 67 509 5.99e-54 189
Msa0215820 AT5G38030.1 27.315 432 261 5 83 463 45 474 1.37e-53 188
Msa0215820 AT5G44050.1 27.824 478 282 5 39 465 7 472 1.09e-52 186
Msa0215820 AT1G47530.2 30.133 375 211 2 141 465 1 374 2.43e-49 174
Msa0215820 AT1G66760.3 31.722 331 176 1 185 465 2 332 7.32e-48 169
Msa0215820 AT3G59030.2 31.909 351 225 4 58 396 16 364 1.57e-47 170
Msa0215820 AT3G26590.2 26.943 386 230 4 141 475 1 385 6.37e-46 165
Msa0215820 AT2G38510.1 27.685 419 251 4 93 459 16 434 4.06e-45 165
Msa0215820 AT5G65380.1 28.571 434 258 4 83 465 37 469 2.44e-44 163
Msa0215820 AT5G17700.2 28.603 458 266 6 59 463 14 463 9.21e-44 161
Msa0215820 AT5G17700.1 28.603 458 266 6 59 463 14 463 9.21e-44 161
Msa0215820 AT5G10420.1 29.064 406 233 4 93 446 48 450 1.83e-43 160
Msa0215820 AT4G25640.1 27.790 457 275 4 60 465 12 464 9.40e-43 158
Msa0215820 AT4G25640.2 27.790 457 275 4 60 465 12 464 1.31e-42 159
Msa0215820 AT4G29140.1 26.570 414 254 2 81 444 54 467 7.26e-41 154
Msa0215820 AT1G58340.1 25.503 447 282 4 64 459 39 485 4.88e-40 152
Msa0215820 AT5G19700.1 25.316 474 300 4 65 484 17 490 5.71e-40 151
Msa0215820 AT1G33110.2 28.061 392 225 3 58 399 17 401 3.63e-38 144
Msa0215820 AT4G25640.3 26.761 426 257 4 60 434 12 433 1.16e-37 144
Msa0215820 AT4G23030.1 26.797 459 269 7 81 476 30 484 5.91e-37 142
Msa0215820 AT5G52050.1 23.441 465 280 7 81 483 33 483 7.69e-33 131
Msa0215820 AT1G71870.1 23.707 464 277 6 81 474 22 478 3.10e-32 129
Msa0215820 AT5G49130.1 23.690 477 296 7 81 491 24 498 3.56e-32 129
Msa0215820 AT4G22790.1 25.054 467 289 9 57 465 1 464 4.02e-32 129
Msa0215820 AT5G17700.3 30.769 312 205 5 59 367 14 317 2.12e-31 125
Msa0215820 AT1G15180.2 30.370 270 138 2 179 398 11 280 5.75e-30 121
Msa0215820 AT3G03620.2 26.506 498 282 14 58 491 18 495 1.03e-27 116
Msa0215820 AT3G03620.1 26.506 498 282 14 58 491 18 495 1.03e-27 116
Msa0215820 AT2G04066.1 36.364 99 63 0 367 465 56 154 6.76e-17 79.0

Find 92 sgRNAs with CRISPR-Local

Find 671 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTATGATTTAGGGTTTA+TGG 0.100127 2_1:+61366293 Msa0215820:intron
GTGATCAATACGTTGTTATT+TGG 0.146354 2_1:+61362668 Msa0215820:CDS
CAATCATTATATCAATTATT+TGG 0.178477 2_1:+61364117 Msa0215820:CDS
AATATTGTTGTAAGAATTAT+TGG 0.211854 2_1:-61362892 None:intergenic
TAAGACCAATTTGCAATATA+AGG 0.221912 2_1:+61366171 Msa0215820:CDS
CACCATTTCTTCTCCATTTG+AGG 0.251721 2_1:-61362817 None:intergenic
ATTGCTTACTTGATCACTTA+TGG 0.255003 2_1:+61365427 Msa0215820:CDS
ATTATACTACTCAATCAATT+TGG 0.260175 2_1:+61362912 Msa0215820:CDS
CTGGGTTATTCAGTCCTAAT+TGG 0.263838 2_1:-61366454 None:intergenic
CAACTGAATGCATGCCAATT+AGG 0.269485 2_1:+61366440 Msa0215820:CDS
GTCTTTGGCCTTTGAAGTCT+TGG 0.286448 2_1:+61365244 Msa0215820:CDS
GTCATGCTTGTTGGTCATCT+TGG 0.292545 2_1:+61362940 Msa0215820:CDS
TCTGTCCAAGGTGTCTTATC+AGG 0.306207 2_1:+61365959 Msa0215820:CDS
ACAATGGTTATCTATGATAT+TGG 0.310640 2_1:+61364406 Msa0215820:CDS
AATCCAAGGATACATGAAAT+TGG 0.311920 2_1:-61366148 None:intergenic
GAGATTCAGTTTAGTCCATT+TGG 0.314048 2_1:-61366377 None:intergenic
CAACTTCATTGATTGCAATA+TGG 0.330876 2_1:+61365303 Msa0215820:CDS
TTGCATATGGATTTGTTCAT+TGG 0.341422 2_1:+61364339 Msa0215820:CDS
TATGGATTGGTCTGATTTGT+GGG 0.351519 2_1:+61366311 Msa0215820:CDS
GAACAAAATCTTGGACATTA+AGG 0.355243 2_1:+61362840 Msa0215820:CDS
TTGGACAGAATCAAGTAGTA+TGG 0.373622 2_1:-61365945 None:intergenic
TATGGATTTGTTCATTGGTC+AGG 0.375906 2_1:+61364344 Msa0215820:CDS
GCAAACTTATGTTTGATAGT+AGG 0.378575 2_1:-61365896 None:intergenic
CTTGGTGAGCTTCAGTTAGC+TGG 0.379613 2_1:+61362958 Msa0215820:CDS
TTATGGATTGGTCTGATTTG+TGG 0.387173 2_1:+61366310 Msa0215820:CDS
ACACTCTGCGGACAAGGATA+TGG 0.387530 2_1:+61364029 Msa0215820:CDS
ACACCAGGATTATTTGCATT+TGG 0.388089 2_1:+61364221 Msa0215820:CDS
GTTCATGTTGGTATTGCATA+TGG 0.392244 2_1:+61364326 Msa0215820:CDS
TCAGTTGTTAAAACAACAAC+AGG 0.400162 2_1:-61366424 None:intergenic
TTGGTTTCTGTCATGCTTGT+TGG 0.402927 2_1:+61362931 Msa0215820:CDS
TATTCTTAGGTTGGTTTAAG+TGG 0.403424 2_1:+61363996 Msa0215820:intron
TGAAAACATGAGTTGATGTT+TGG 0.414038 2_1:-61362866 None:intergenic
ATGATTTAGGGTTTATGGAT+TGG 0.417010 2_1:+61366298 Msa0215820:intron
GTGCTACTCTTGCTAACTCC+TGG 0.417185 2_1:+61362980 Msa0215820:CDS
ACTCTTGCTAACTCCTGGTT+TGG 0.426245 2_1:+61362985 Msa0215820:CDS
TTACCAATTTCATGTATCCT+TGG 0.429347 2_1:+61366145 Msa0215820:CDS
GTCACTGTGGTTTCAAACAC+TGG 0.432696 2_1:-61366473 None:intergenic
CGCTCATGCCGTGCATCTAA+AGG 0.435892 2_1:-61366500 None:intergenic
AACCTCAAATGGAGAAGAAA+TGG 0.438983 2_1:+61362815 Msa0215820:CDS
ATACCAACATGAACAATTGC+TGG 0.443225 2_1:-61364317 None:intergenic
GAAATGGTGGAACAAAATCT+TGG 0.448970 2_1:+61362831 Msa0215820:CDS
TGGTTTGGTGTCACTGCCGT+GGG 0.456929 2_1:+61363000 Msa0215820:CDS
ACAGAACACAGAACCTCAAA+TGG 0.462045 2_1:+61362804 Msa0215820:CDS
GCAAAACAATATCACATGTT+GGG 0.463704 2_1:+61364053 Msa0215820:CDS
CAAAGAAGTTTAAGAATACA+TGG 0.465924 2_1:+61364450 Msa0215820:CDS
TGGTTATCTATGATATTGGT+AGG 0.477776 2_1:+61364410 Msa0215820:CDS
TTCCCTCTGCAGCAATGCTA+TGG 0.479844 2_1:+61364528 Msa0215820:CDS
CTGGTTTGGTGTCACTGCCG+TGG 0.480515 2_1:+61362999 Msa0215820:CDS
GATTGGTCTGATTTGTGGGC+TGG 0.481391 2_1:+61366315 Msa0215820:CDS
GGTTGGTTTAAGTGGTGCAT+TGG 0.483092 2_1:+61364004 Msa0215820:intron
CACGGCAGTGACACCAAACC+AGG 0.495964 2_1:-61362998 None:intergenic
TGCAAAACAATATCACATGT+TGG 0.498803 2_1:+61364052 Msa0215820:CDS
TATAATTATCTTGCAACAAG+TGG 0.506645 2_1:+61362706 Msa0215820:CDS
TGGACTAAACTGAATCTCTC+AGG 0.510846 2_1:+61366382 Msa0215820:CDS
GCAAATTGGTCTTAAATCCA+AGG 0.513854 2_1:-61366162 None:intergenic
TACCAACATGAACAATTGCT+GGG 0.525480 2_1:-61364316 None:intergenic
TAGTATGGAAATAGCAAGGA+AGG 0.528110 2_1:-61365930 None:intergenic
ATACTACTTGATTCTGTCCA+AGG 0.532890 2_1:+61365947 Msa0215820:CDS
TGGTCAGGTCTTAATTTCAA+AGG 0.535335 2_1:+61364359 Msa0215820:CDS
TGTGAAATAGAAGTTGCAAC+TGG 0.539833 2_1:-61364386 None:intergenic
TTGGACACACTCTGCGGACA+AGG 0.550981 2_1:+61364023 Msa0215820:CDS
ATCCCAGCAATTGTTCATGT+TGG 0.551655 2_1:+61364314 Msa0215820:CDS
GTGCCAAATGCAAATAATCC+TGG 0.552621 2_1:-61364224 None:intergenic
ATACCATAGCATTGCTGCAG+AGG 0.562395 2_1:-61364531 None:intergenic
GCATGAGCGAAACTATAACT+TGG 0.564059 2_1:+61366514 Msa0215820:three_prime_UTR
TACCATAGCATTGCTGCAGA+GGG 0.564621 2_1:-61364530 None:intergenic
TCAGGTCTTAATTTCAAAGG+TGG 0.579566 2_1:+61364362 Msa0215820:CDS
GGGTGGTTAGAGCATGTGGT+TGG 0.580612 2_1:+61366074 Msa0215820:CDS
AAGTTTAAGAATACATGGAG+AGG 0.587004 2_1:+61364455 Msa0215820:CDS
GCAGGGGTGGTTAGAGCATG+TGG 0.587402 2_1:+61366070 Msa0215820:intron
GCAACAAGTGGCATTTCAGA+TGG 0.588881 2_1:+61362772 Msa0215820:CDS
TCACTGTGGTTTCAAACACT+GGG 0.589158 2_1:-61366472 None:intergenic
TAAGAAAACCAAGACTTCAA+AGG 0.595340 2_1:-61365252 None:intergenic
TATATGAAGTTTCTTACACC+AGG 0.597567 2_1:+61364206 Msa0215820:CDS
TCAAACCTGATAAGACACCT+TGG 0.598187 2_1:-61365964 None:intergenic
CTCAAATGGAGAAGAAATGG+TGG 0.601243 2_1:+61362818 Msa0215820:CDS
CAATTGCTGGGATAGCTGAA+AGG 0.606860 2_1:-61364304 None:intergenic
CAAGTAGTATGGAAATAGCA+AGG 0.610836 2_1:-61365934 None:intergenic
GCACCTTGAGAAACATGTTG+AGG 0.613110 2_1:+61364243 Msa0215820:CDS
AAACCTCAACATGTTTCTCA+AGG 0.620006 2_1:-61364246 None:intergenic
AGTATGGAAATAGCAAGGAA+GGG 0.626716 2_1:-61365929 None:intergenic
TTGCAACTTCTATTTCACAA+TGG 0.629478 2_1:+61364390 Msa0215820:CDS
TGACAGCTCCTTTAGATGCA+CGG 0.630822 2_1:+61366492 Msa0215820:three_prime_UTR
ATGGTCTTAGTGCAGCCGCA+AGG 0.642632 2_1:+61365446 Msa0215820:CDS
ATAGTTCACATGGCAACAAG+TGG 0.647763 2_1:+61362760 Msa0215820:CDS
TCAGAGTAAGATAGTTCACA+TGG 0.652728 2_1:+61362750 Msa0215820:CDS
GTTTGGTGTCACTGCCGTGG+GGG 0.656005 2_1:+61363002 Msa0215820:CDS
GGTTTGGTGTCACTGCCGTG+GGG 0.656064 2_1:+61363001 Msa0215820:CDS
ACAATCTGTAGTGATGCCAC+TGG 0.681457 2_1:+61364277 Msa0215820:CDS
ATAGCTGAAAGGATAACCAG+TGG 0.728809 2_1:-61364293 None:intergenic
GGTGCATTGGACACACTCTG+CGG 0.737000 2_1:+61364017 Msa0215820:CDS
ATCTAAAGGAGCTGTCACTG+TGG 0.742034 2_1:-61366486 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTAAATT+TGG + chr2_1:61369298-61369317 Msa0215820:intron 0.0%
!! TTTATATATAAATTTGATCT+AGG + chr2_1:61363055-61363074 Msa0215820:intron 10.0%
!!! TGTTTTTTAATTATGATTTA+GGG + chr2_1:61366286-61366305 Msa0215820:intron 10.0%
!!! TGTTTTTTAATTATGATTTA+GGG + chr2_1:61366286-61366305 Msa0215820:intron 10.0%
!! AATATTGTTGTAAGAATTAT+TGG - chr2_1:61362895-61362914 None:intergenic 15.0%
!! AAAAAAATTAAATGTTGCAT+TGG + chr2_1:61363347-61363366 Msa0215820:intron 15.0%
!!! AATATTGTTATTTTTCTGTT+AGG - chr2_1:61363636-61363655 None:intergenic 15.0%
!!! TTTACAAAAAATTGTGATTT+TGG - chr2_1:61363724-61363743 None:intergenic 15.0%
!!! ACAATTTTTTGTAAAGATAA+AGG + chr2_1:61363729-61363748 Msa0215820:intron 15.0%
!!! AAAATTTTGCCTTATATTTA+GGG - chr2_1:61363835-61363854 None:intergenic 15.0%
!!! TAAAATTTTGCCTTATATTT+AGG - chr2_1:61363836-61363855 None:intergenic 15.0%
!!! TTTTAATTCTCTTTTATTAG+AGG + chr2_1:61363851-61363870 Msa0215820:intron 15.0%
!! GGATAAACATAATAATAAAA+AGG - chr2_1:61363925-61363944 None:intergenic 15.0%
!! ATTATTATGTTTATCCAAAT+AGG + chr2_1:61363929-61363948 Msa0215820:intron 15.0%
!! CAATCATTATATCAATTATT+TGG + chr2_1:61364117-61364136 Msa0215820:CDS 15.0%
!! TCTTAAATTAAACATATGTA+TGG - chr2_1:61365173-61365192 None:intergenic 15.0%
!! TAGTAAGATTCATAAATATA+AGG - chr2_1:61365202-61365221 None:intergenic 15.0%
!!! TATTTTATATTTTGCAAGTT+TGG + chr2_1:61365220-61365239 Msa0215820:intron 15.0%
!!! TTTTACAGATAAAATGTTAA+TGG + chr2_1:61366237-61366256 Msa0215820:intron 15.0%
!!! GTGTTTTTTAATTATGATTT+AGG + chr2_1:61366285-61366304 Msa0215820:intron 15.0%
!!! GATATAAATTTTGTATGTTT+CGG - chr2_1:61368487-61368506 None:intergenic 15.0%
!! AAATTGCGAATATTAAAATA+GGG - chr2_1:61370065-61370084 None:intergenic 15.0%
!! AAAATTGCGAATATTAAAAT+AGG - chr2_1:61370066-61370085 None:intergenic 15.0%
!! ATTAATATGTTTATCCAAAT+AGG + chr2_1:61370784-61370803 Msa0215820:intron 15.0%
!!! TTTTACCTTATATTTCAAAT+TGG - chr2_1:61371884-61371903 None:intergenic 15.0%
!!! TTTTACAGATAAAATGTTAA+TGG + chr2_1:61366237-61366256 Msa0215820:intron 15.0%
!!! GTGTTTTTTAATTATGATTT+AGG + chr2_1:61366285-61366304 Msa0215820:intron 15.0%
!!! TCTTTCTTTTTTTTCAAAGA+AGG + chr2_1:61362618-61362637 Msa0215820:CDS 20.0%
!!! CTTTCTTTTTTTTCAAAGAA+GGG + chr2_1:61362619-61362638 Msa0215820:CDS 20.0%
!! ATTATACTACTCAATCAATT+TGG + chr2_1:61362912-61362931 Msa0215820:CDS 20.0%
!!! ATTAATTCTGTTGATTTCAA+TGG + chr2_1:61363226-61363245 Msa0215820:intron 20.0%
!! CTCTTATTAATTATAGTTAG+TGG + chr2_1:61363275-61363294 Msa0215820:intron 20.0%
!! TGAATGAAATTCAATAAACA+AGG + chr2_1:61363309-61363328 Msa0215820:intron 20.0%
!! GAATGAAATTCAATAAACAA+GGG + chr2_1:61363310-61363329 Msa0215820:intron 20.0%
!!! ATAAACAAGGGTATAATAAT+AGG + chr2_1:61363322-61363341 Msa0215820:intron 20.0%
!! AAAAGATAAATGAACTAAAC+AGG - chr2_1:61363518-61363537 None:intergenic 20.0%
!!! TTCATTTATCTTTTGAAACA+TGG + chr2_1:61363524-61363543 Msa0215820:intron 20.0%
!!! CAACATTTTGTAAAATTAAG+GGG - chr2_1:61363660-61363679 None:intergenic 20.0%
!!! GCAACATTTTGTAAAATTAA+GGG - chr2_1:61363661-61363680 None:intergenic 20.0%
!!! TGCAACATTTTGTAAAATTA+AGG - chr2_1:61363662-61363681 None:intergenic 20.0%
!!! TTTAGAGAAATATGCTATTT+TGG - chr2_1:61363788-61363807 None:intergenic 20.0%
!! ATTGCATAGAATTAGATATA+TGG + chr2_1:61364749-61364768 Msa0215820:intron 20.0%
!! ACATAAATTTCCTATAATCT+AGG + chr2_1:61365528-61365547 Msa0215820:intron 20.0%
!!! CTCATATTTTAAAGTTGATT+TGG - chr2_1:61365614-61365633 None:intergenic 20.0%
!! ATCATTAACGAAAAAATCTT+AGG + chr2_1:61366027-61366046 Msa0215820:intron 20.0%
!!! TTTTACCTTATATTGCAAAT+TGG - chr2_1:61366179-61366198 None:intergenic 20.0%
!!! TAATTATGATTTAGGGTTTA+TGG + chr2_1:61366293-61366312 Msa0215820:intron 20.0%
!!! AATGAAAACACTATTTTCTA+AGG + chr2_1:61366668-61366687 Msa0215820:intron 20.0%
!!! ATGAAAACACTATTTTCTAA+GGG + chr2_1:61366669-61366688 Msa0215820:intron 20.0%
!! ACATCTATAAATTTAATGTC+TGG - chr2_1:61366810-61366829 None:intergenic 20.0%
!! TTTGATAAAAATGCAAATCA+AGG + chr2_1:61366841-61366860 Msa0215820:intron 20.0%
!! TTGATAAAAATGCAAATCAA+GGG + chr2_1:61366842-61366861 Msa0215820:intron 20.0%
!! ATGAATAAAAAACAGATAAC+TGG + chr2_1:61367925-61367944 Msa0215820:intron 20.0%
!! ATTTAGTATGTATGTTTCAA+GGG - chr2_1:61368335-61368354 None:intergenic 20.0%
!! AATTTAGTATGTATGTTTCA+AGG - chr2_1:61368336-61368355 None:intergenic 20.0%
!!! GAAACATACATACTAAATTT+TGG + chr2_1:61368337-61368356 Msa0215820:intron 20.0%
!! TACAAAATTTATATCCAAAC+TGG + chr2_1:61368492-61368511 Msa0215820:intron 20.0%
!!! TTGGGTAATTATTGAATTTT+TGG - chr2_1:61368537-61368556 None:intergenic 20.0%
!!! TATTAGTAAGTTGGAATATT+TGG - chr2_1:61368701-61368720 None:intergenic 20.0%
!!! TCTTTTTTTTCTTTCAAAGA+AGG + chr2_1:61369387-61369406 Msa0215820:intron 20.0%
!!! CTTTTTTTTCTTTCAAAGAA+GGG + chr2_1:61369388-61369407 Msa0215820:intron 20.0%
!! AATAAAGTTGTAAGAGTTAT+TGG - chr2_1:61369660-61369679 None:intergenic 20.0%
!! ATTATATAACTCAATCACTT+TGG + chr2_1:61369677-61369696 Msa0215820:intron 20.0%
!! TTAAATGATAAATCTTGAAC+TGG + chr2_1:61369833-61369852 Msa0215820:intron 20.0%
!!! TTTTTTTTGTATTACTCGTT+TGG + chr2_1:61369927-61369946 Msa0215820:intron 20.0%
!! ATTCAGATTCAATCAAAATA+GGG - chr2_1:61370035-61370054 None:intergenic 20.0%
!! AATTCAGATTCAATCAAAAT+AGG - chr2_1:61370036-61370055 None:intergenic 20.0%
!! AATCCATATTCAATCAAAAT+AGG - chr2_1:61370095-61370114 None:intergenic 20.0%
!!! TTGACTTGTTTTATTTTGTT+TGG + chr2_1:61370340-61370359 Msa0215820:intron 20.0%
!! AAATCGATTAATGAATAAGT+GGG - chr2_1:61370709-61370728 None:intergenic 20.0%
!! TAAATCGATTAATGAATAAG+TGG - chr2_1:61370710-61370729 None:intergenic 20.0%
!! CCAAATAATTGATATAATGA+TGG - chr2_1:61364120-61364139 None:intergenic 20.0%
!! CCATCATTATATCAATTATT+TGG + chr2_1:61370962-61370981 Msa0215820:intron 20.0%
!! ATCATTAACGAAAAAATCTT+AGG + chr2_1:61366027-61366046 Msa0215820:intron 20.0%
!!! TAAGACCAATTTGAAATATA+AGG + chr2_1:61371876-61371895 Msa0215820:intron 20.0%
!!! TAATTATGATTTAGGGTTTA+TGG + chr2_1:61366293-61366312 Msa0215820:intron 20.0%
!!! TTCATTTTCTCTAAATGAAT+GGG - chr2_1:61366654-61366673 None:intergenic 20.0%
!!! TTTCATTTTCTCTAAATGAA+TGG - chr2_1:61366655-61366674 None:intergenic 20.0%
! AAAAAACATGATATGAGATG+TGG - chr2_1:61362646-61362665 None:intergenic 25.0%
! TATAATTATCTTGCAACAAG+TGG + chr2_1:61362706-61362725 Msa0215820:CDS 25.0%
! ATAGTCGAGTAAAATCATAA+TGG - chr2_1:61363141-61363160 None:intergenic 25.0%
! AAACAACTATAATTCAGAGA+CGG - chr2_1:61363177-61363196 None:intergenic 25.0%
! CTCTGAATTATAGTTGTTTA+AGG + chr2_1:61363178-61363197 Msa0215820:intron 25.0%
! TTAAATGCTAAACATGTGTT+TGG - chr2_1:61363453-61363472 None:intergenic 25.0%
! TAAATATCCATAAGCTAGTA+AGG + chr2_1:61363470-61363489 Msa0215820:intron 25.0%
! AAATATCCATAAGCTAGTAA+GGG + chr2_1:61363471-61363490 Msa0215820:intron 25.0%
!!! AGTAAGGGTATTTAAATGTT+CGG + chr2_1:61363486-61363505 Msa0215820:intron 25.0%
!!! TGCAACGTTTTAAAAGTTAA+GGG - chr2_1:61363603-61363622 None:intergenic 25.0%
!!! TTGCAACGTTTTAAAAGTTA+AGG - chr2_1:61363604-61363623 None:intergenic 25.0%
!!! CTTTTAAAACGTTGCAATTT+CGG + chr2_1:61363607-61363626 Msa0215820:intron 25.0%
!!! CATATTTCTCTAAAGTTAGA+GGG + chr2_1:61363794-61363813 Msa0215820:intron 25.0%
!! TTGTTTGCCTTATTATTCTT+AGG + chr2_1:61363983-61364002 Msa0215820:intron 25.0%
! AAACCAACCTAAGAATAATA+AGG - chr2_1:61363993-61364012 None:intergenic 25.0%
! ACAATGGTTATCTATGATAT+TGG + chr2_1:61364406-61364425 Msa0215820:CDS 25.0%
! CAAAGAAGTTTAAGAATACA+TGG + chr2_1:61364450-61364469 Msa0215820:CDS 25.0%
!! TCTAAGATCAATCATCAAAA+GGG - chr2_1:61364587-61364606 None:intergenic 25.0%
!!! TTCTAAGATCAATCATCAAA+AGG - chr2_1:61364588-61364607 None:intergenic 25.0%
!! AACCAAGAAGCTAATATTTT+AGG - chr2_1:61364622-61364641 None:intergenic 25.0%
! ATATCTAATTCTATGCAATG+TGG - chr2_1:61364748-61364767 None:intergenic 25.0%
! AAACTTTATAAGCTCTACAT+AGG - chr2_1:61364775-61364794 None:intergenic 25.0%
! TATGTAGAGCTTATAAAGTT+TGG + chr2_1:61364774-61364793 Msa0215820:intron 25.0%
!!! GTTTAATCCAAGTTTTAAGA+TGG + chr2_1:61364839-61364858 Msa0215820:intron 25.0%
! TTTGATACCATCTTAAAACT+TGG - chr2_1:61364849-61364868 None:intergenic 25.0%
! ATCTATCATAGATTTCTTGT+TGG + chr2_1:61364869-61364888 Msa0215820:intron 25.0%
! TCTATCATAGATTTCTTGTT+GGG + chr2_1:61364870-61364889 Msa0215820:intron 25.0%
! ATAGGAAATTTATGTCTAGA+AGG - chr2_1:61365523-61365542 None:intergenic 25.0%
!! AACTTAACTTTTATAGCACA+AGG + chr2_1:61365726-61365745 Msa0215820:intron 25.0%
!! ACTTAACTTTTATAGCACAA+GGG + chr2_1:61365727-61365746 Msa0215820:intron 25.0%
!! TTTGCTTTGATGATTGTATT+TGG + chr2_1:61365839-61365858 Msa0215820:intron 25.0%
! TTGTATTTGGTCATGATATA+TGG + chr2_1:61365852-61365871 Msa0215820:intron 25.0%
! ATTAACGAAAAAATCTTAGG+CGG + chr2_1:61366030-61366049 Msa0215820:intron 25.0%
! TAAGACCAATTTGCAATATA+AGG + chr2_1:61366171-61366190 Msa0215820:CDS 25.0%
! ACAGGCTAAAAAATTATTAC+AGG + chr2_1:61366586-61366605 Msa0215820:intron 25.0%
!!! AACAAGAAACGTTTTTAGAT+AGG - chr2_1:61366631-61366650 None:intergenic 25.0%
!! TGAAAACACTATTTTCTAAG+GGG + chr2_1:61366670-61366689 Msa0215820:intron 25.0%
! TATAAATTTAATGTCTGGCT+TGG - chr2_1:61366805-61366824 None:intergenic 25.0%
!! TAAAGAGAAGTATACAGAAA+TGG - chr2_1:61367109-61367128 Msa0215830:CDS 25.0%
! ATACTTCTCTTTATCAGTTT+AGG + chr2_1:61367116-61367135 Msa0215820:intron 25.0%
! TAGACAATATTATGAAGTCT+CGG - chr2_1:61367655-61367674 Msa0215840:CDS 25.0%
! GATCAATTTGTCGAAAAAAT+GGG + chr2_1:61367778-61367797 Msa0215820:intron 25.0%
! AATTATCCAAAATCACATGT+TGG + chr2_1:61368066-61368085 Msa0215820:intron 25.0%
! TTCTGCAAAACAGTTTATTT+CGG + chr2_1:61368251-61368270 Msa0215820:intron 25.0%
! GCTAAAACGTGAATTTAAAT+TGG - chr2_1:61368372-61368391 None:intergenic 25.0%
!!! ATTCACGTTTTAGCTTATTT+CGG + chr2_1:61368378-61368397 Msa0215820:intron 25.0%
!! GGAAATTTTATGCTGAAAAA+TGG - chr2_1:61368429-61368448 None:intergenic 25.0%
!! ATTTTGTATGTTTCGGATTA+GGG - chr2_1:61368480-61368499 None:intergenic 25.0%
!! AATTTTGTATGTTTCGGATT+AGG - chr2_1:61368481-61368500 None:intergenic 25.0%
! AAAATTTATATCCAAACTGG+AGG + chr2_1:61368495-61368514 Msa0215820:intron 25.0%
! AAATTTATATCCAAACTGGA+GGG + chr2_1:61368496-61368515 Msa0215820:intron 25.0%
! ATTCAATAATTACCCAATCA+TGG + chr2_1:61368540-61368559 Msa0215820:intron 25.0%
!! CAAATTGATTCCTATGAAAT+TGG + chr2_1:61368920-61368939 Msa0215820:intron 25.0%
!! AATTTTTCACCAAATCATCA+TGG - chr2_1:61369082-61369101 None:intergenic 25.0%
!!! ATGATGATTTGGTGAAAAAT+TGG + chr2_1:61369081-61369100 Msa0215820:intron 25.0%
! AAAAAAATTAAATTTGGCCC+CGG + chr2_1:61369304-61369323 Msa0215820:intron 25.0%
! AAAGAAAATGACAAGAAATG+TGG - chr2_1:61369415-61369434 None:intergenic 25.0%
!! GTGATTAATACGTTGTTATT+TGG + chr2_1:61369437-61369456 Msa0215820:intron 25.0%
! CATCATATAATTATCTGTCA+TGG + chr2_1:61369470-61369489 Msa0215820:intron 25.0%
! TTTAGCCAAAAAAAACTAGA+CGG - chr2_1:61369997-61370016 None:intergenic 25.0%
!! TTGATTGAATATGGATTTTG+AGG + chr2_1:61370098-61370117 Msa0215820:intron 25.0%
!! TGATTGAATATGGATTTTGA+GGG + chr2_1:61370099-61370118 Msa0215820:intron 25.0%
! TACTAGACTTTAATCATTTG+TGG - chr2_1:61370231-61370250 None:intergenic 25.0%
! ACAAATGATTAAAGTCTAGT+AGG + chr2_1:61370230-61370249 Msa0215820:intron 25.0%
! AAAAATTACGATTGAAGAGA+TGG - chr2_1:61370435-61370454 None:intergenic 25.0%
! TTAGCGTTTAAATATCCATA+AGG + chr2_1:61370507-61370526 Msa0215820:intron 25.0%
! AATCGATTAATGAATAAGTG+GGG - chr2_1:61370708-61370727 None:intergenic 25.0%
! TAAATATTGTCACAAGACTA+AGG + chr2_1:61370810-61370829 Msa0215820:intron 25.0%
! TATATGAAGTTTCTTATACC+AGG + chr2_1:61371051-61371070 Msa0215820:intron 25.0%
! ACTATGGATATCTATGATAT+TGG + chr2_1:61371251-61371270 Msa0215820:intron 25.0%
! CAAAGAAGTTTAAGAATACA+TGG + chr2_1:61364450-61364469 Msa0215820:CDS 25.0%
!! TCTAAGATCAATCATCAAAA+GGG - chr2_1:61364587-61364606 None:intergenic 25.0%
!!! TTCTAAGATCAATCATCAAA+AGG - chr2_1:61364588-61364607 None:intergenic 25.0%
!! AACCAAGAAGCTAATATTTT+AGG - chr2_1:61364622-61364641 None:intergenic 25.0%
!! TTTGCTTTGATGATTGTATT+TGG + chr2_1:61365839-61365858 Msa0215820:intron 25.0%
! TTGTATTTGGTCATGATATA+TGG + chr2_1:61365852-61365871 Msa0215820:intron 25.0%
! ATTAACGAAAAAATCTTAGG+CGG + chr2_1:61366030-61366049 Msa0215820:intron 25.0%
! TTGAATGTGAAAACAAAAAC+AGG + chr2_1:61372273-61372292 Msa0215820:intron 25.0%
!!! AACAAGAAACGTTTTTAGAT+AGG - chr2_1:61366631-61366650 None:intergenic 25.0%
!! ATGAAAACACTGTTTTCTAA+TGG + chr2_1:61372374-61372393 Msa0215820:three_prime_UTR 25.0%
!! TGAAAACACTGTTTTCTAAT+GGG + chr2_1:61372375-61372394 Msa0215820:three_prime_UTR 25.0%
! GTGATCAATACGTTGTTATT+TGG + chr2_1:61362668-61362687 Msa0215820:CDS 30.0%
GAACAAAATCTTGGACATTA+AGG + chr2_1:61362840-61362859 Msa0215820:CDS 30.0%
!! TGAAAACATGAGTTGATGTT+TGG - chr2_1:61362869-61362888 None:intergenic 30.0%
ATAAATTTGATCTAGGTAGC+TGG + chr2_1:61363062-61363081 Msa0215820:intron 30.0%
AAAAATAACTACTGAAGAGC+TGG - chr2_1:61363092-61363111 None:intergenic 30.0%
! TAAATACCCTTACTAGCTTA+TGG - chr2_1:61363480-61363499 None:intergenic 30.0%
!!! GCAACGTTTTAAAAGTTAAG+GGG - chr2_1:61363602-61363621 None:intergenic 30.0%
!!! TGATTTTGGCCCTTTATTTT+GGG - chr2_1:61363710-61363729 None:intergenic 30.0%
GTTTATTTCCCTAAAGAAAG+AGG + chr2_1:61363761-61363780 Msa0215820:intron 30.0%
!! ATTTTGGTCCTCTTTCTTTA+GGG - chr2_1:61363772-61363791 None:intergenic 30.0%
!!! TATTTTGGTCCTCTTTCTTT+AGG - chr2_1:61363773-61363792 None:intergenic 30.0%
!! GCATATTTCTCTAAAGTTAG+AGG + chr2_1:61363793-61363812 Msa0215820:intron 30.0%
GAGCATATTCCCTAAATATA+AGG + chr2_1:61363823-61363842 Msa0215820:intron 30.0%
! TTGCCTTATTATTCTTAGGT+TGG + chr2_1:61363987-61364006 Msa0215820:intron 30.0%
!! TATTCTTAGGTTGGTTTAAG+TGG + chr2_1:61363996-61364015 Msa0215820:intron 30.0%
TGCAAAACAATATCACATGT+TGG + chr2_1:61364052-61364071 Msa0215820:CDS 30.0%
GCAAAACAATATCACATGTT+GGG + chr2_1:61364053-61364072 Msa0215820:CDS 30.0%
TATATGAAGTTTCTTACACC+AGG + chr2_1:61364206-61364225 Msa0215820:CDS 30.0%
! TTGCATATGGATTTGTTCAT+TGG + chr2_1:61364339-61364358 Msa0215820:CDS 30.0%
TTGCAACTTCTATTTCACAA+TGG + chr2_1:61364390-61364409 Msa0215820:CDS 30.0%
TGGTTATCTATGATATTGGT+AGG + chr2_1:61364410-61364429 Msa0215820:CDS 30.0%
AAGTTTAAGAATACATGGAG+AGG + chr2_1:61364455-61364474 Msa0215820:CDS 30.0%
GTTCATTGTTAGGATGTAAA+GGG + chr2_1:61364710-61364729 Msa0215820:intron 30.0%
TTCATTGTTAGGATGTAAAG+GGG + chr2_1:61364711-61364730 Msa0215820:intron 30.0%
! CTATGGATTAACGTTAATTC+CGG - chr2_1:61364952-61364971 None:intergenic 30.0%
AATCCATAGATGTCTAATTG+CGG + chr2_1:61364963-61364982 Msa0215820:intron 30.0%
TCTAGTAGAGATAAGAGTTA+AGG + chr2_1:61365063-61365082 Msa0215820:intron 30.0%
TAGTTTCGTAGAGTTGAATT+AGG + chr2_1:61365124-61365143 Msa0215820:intron 30.0%
TAAGAAAACCAAGACTTCAA+AGG - chr2_1:61365255-61365274 None:intergenic 30.0%
! CAACTTCATTGATTGCAATA+TGG + chr2_1:61365303-61365322 Msa0215820:CDS 30.0%
ATTGCTTACTTGATCACTTA+TGG + chr2_1:61365427-61365446 Msa0215820:CDS 30.0%
TTTCTGCTTTCCTAGATTAT+AGG - chr2_1:61365541-61365560 None:intergenic 30.0%
AGCAATCAAATTTCCTTCAT+AGG + chr2_1:61365690-61365709 Msa0215820:intron 30.0%
GCAATCAAATTTCCTTCATA+GGG + chr2_1:61365691-61365710 Msa0215820:intron 30.0%
CAATCAAATTTCCTTCATAG+GGG + chr2_1:61365692-61365711 Msa0215820:intron 30.0%
TCAAAGCAAAACATAAACCA+AGG - chr2_1:61365829-61365848 None:intergenic 30.0%
TTGGTCATGATATATGGATT+CGG + chr2_1:61365858-61365877 Msa0215820:intron 30.0%
! GCAAACTTATGTTTGATAGT+AGG - chr2_1:61365899-61365918 None:intergenic 30.0%
CAATGAGATAAAAAGTTGCA+AGG - chr2_1:61366123-61366142 None:intergenic 30.0%
! CTTGCAACTTTTTATCTCAT+TGG + chr2_1:61366121-61366140 Msa0215820:CDS 30.0%
TTACCAATTTCATGTATCCT+TGG + chr2_1:61366145-61366164 Msa0215820:CDS 30.0%
AATCCAAGGATACATGAAAT+TGG - chr2_1:61366151-61366170 None:intergenic 30.0%
! ATGATTTAGGGTTTATGGAT+TGG + chr2_1:61366298-61366317 Msa0215820:intron 30.0%
! TTTTGACAAGATATGCCAAA+TGG + chr2_1:61366362-61366381 Msa0215820:CDS 30.0%
TCAGTTGTTAAAACAACAAC+AGG - chr2_1:61366427-61366446 None:intergenic 30.0%
TTGAATGTGAAAGCAAAAAC+AGG + chr2_1:61366568-61366587 Msa0215820:intron 30.0%
ATAATTCGCGACATATATCA+TGG + chr2_1:61366711-61366730 Msa0215820:intron 30.0%
TAATTCGCGACATATATCAT+GGG + chr2_1:61366712-61366731 Msa0215820:intron 30.0%
! GGTTTTCTTAATGGTATTTC+TGG - chr2_1:61366900-61366919 None:intergenic 30.0%
GGATTAATGATAAGAAACTG+AGG - chr2_1:61366973-61366992 None:intergenic 30.0%
GTATACAGAAATGGAAGAAT+AGG - chr2_1:61367100-61367119 Msa0215830:CDS 30.0%
! TCTTTAAAAGAGCTTGTGTT+TGG - chr2_1:61367329-61367348 Msa0215830:CDS 30.0%
TGAAAGAAAGATAGAGTTTC+CGG - chr2_1:61367381-61367400 Msa0215830:CDS 30.0%
TCTGGAAAATGCTAATAAGA+GGG - chr2_1:61367405-61367424 Msa0215830:CDS 30.0%
ATCTGGAAAATGCTAATAAG+AGG - chr2_1:61367406-61367425 Msa0215830:CDS 30.0%
CGATCAATTTGTCGAAAAAA+TGG + chr2_1:61367777-61367796 Msa0215820:intron 30.0%
!!! AAACAGATAACTGGTTTTGA+AGG + chr2_1:61367934-61367953 Msa0215820:intron 30.0%
CTTTGTGACTTAGAATCATT+AGG - chr2_1:61368029-61368048 None:intergenic 30.0%
TCACCTTTAACCATTTGAAA+TGG + chr2_1:61368142-61368161 Msa0215820:intron 30.0%
! GACATTATTTGGGACTTAAA+TGG - chr2_1:61368210-61368229 None:intergenic 30.0%
! GTTTTGCAGAAATGTGATTA+TGG - chr2_1:61368242-61368261 None:intergenic 30.0%
CGTGAATTTAAATTGGTGAA+TGG - chr2_1:61368365-61368384 None:intergenic 30.0%
TTATGCTGAAAAATGGCTTA+CGG - chr2_1:61368422-61368441 None:intergenic 30.0%
! CAGAAAACACATTTGAAGTT+TGG - chr2_1:61368450-61368469 None:intergenic 30.0%
!!! ATTTTGAGACGAAATTCGTA+TGG - chr2_1:61368598-61368617 None:intergenic 30.0%
AAGTTGGAATATTTGGAGAA+TGG - chr2_1:61368694-61368713 None:intergenic 30.0%
AGGTGAGTTTATTAGTAAGT+TGG - chr2_1:61368710-61368729 None:intergenic 30.0%
!!! TTGACTTGTTTTGATGCATA+AGG - chr2_1:61368752-61368771 None:intergenic 30.0%
AATTATGTTGTGGGTGATTA+CGG - chr2_1:61368777-61368796 None:intergenic 30.0%
CAAGAATGCAATTATGTTGT+GGG - chr2_1:61368786-61368805 None:intergenic 30.0%
TCAAGAATGCAATTATGTTG+TGG - chr2_1:61368787-61368806 None:intergenic 30.0%
!! TCAATTTGTAAGCTTGCTTT+TGG - chr2_1:61368908-61368927 None:intergenic 30.0%
! ATTGATTCCTATGAAATTGG+AGG + chr2_1:61368923-61368942 Msa0215820:intron 30.0%
TTGATTCCTATGAAATTGGA+GGG + chr2_1:61368924-61368943 Msa0215820:intron 30.0%
! ATTTTTCCCTCCAATTTCAT+AGG - chr2_1:61368933-61368952 None:intergenic 30.0%
AAATCATCATGGAATCATCA+TGG - chr2_1:61369071-61369090 None:intergenic 30.0%
ATGATGATTCCATGATGATT+TGG + chr2_1:61369070-61369089 Msa0215820:intron 30.0%
! TTGGTGAAAAATTGGTGATT+AGG + chr2_1:61369089-61369108 Msa0215820:intron 30.0%
!!! GGTGATTAGGTTTTTTTTAG+TGG + chr2_1:61369102-61369121 Msa0215820:intron 30.0%
!!! GATTAGGTTTTTTTTAGTGG+TGG + chr2_1:61369105-61369124 Msa0215820:intron 30.0%
AACCTCAAATAGAGAAGAAA+TGG + chr2_1:61369580-61369599 Msa0215820:intron 30.0%
GAACAAAATCTTGGACATTA+AGG + chr2_1:61362840-61362859 Msa0215820:CDS 30.0%
!! TGAAAACATGAGTTGATGTT+TGG - chr2_1:61362869-61362888 None:intergenic 30.0%
GATAAATCTTGAACTGGTAT+TGG + chr2_1:61369839-61369858 Msa0215820:intron 30.0%
!!! TATGTCCGTCTAGTTTTTTT+TGG + chr2_1:61369989-61370008 Msa0215820:intron 30.0%
AGATTCAATCAAAATAGGGT+GGG - chr2_1:61370031-61370050 None:intergenic 30.0%
TTGCGAATATTAAAATAGGG+AGG - chr2_1:61370062-61370081 None:intergenic 30.0%
CATATTCAATCAAAATAGGC+GGG - chr2_1:61370091-61370110 None:intergenic 30.0%
CCATATTCAATCAAAATAGG+CGG - chr2_1:61370092-61370111 None:intergenic 30.0%
! GATTGAATATGGATTTTGAG+GGG + chr2_1:61370100-61370119 Msa0215820:intron 30.0%
!! ATTGAATATGGATTTTGAGG+GGG + chr2_1:61370101-61370120 Msa0215820:intron 30.0%
GGAAAACACTAAAGTTATTG+TGG - chr2_1:61370477-61370496 None:intergenic 30.0%
TTAAACGCTAAACATGTGTT+TGG - chr2_1:61370498-61370517 None:intergenic 30.0%
GACAATATTTACGTCCTATT+TGG - chr2_1:61370801-61370820 None:intergenic 30.0%
TGCAAAAGAATATCACATGT+TGG + chr2_1:61370897-61370916 Msa0215820:intron 30.0%
GCAAAAGAATATCACATGTT+GGG + chr2_1:61370898-61370917 Msa0215820:intron 30.0%
ATACCAGGATTATTTGCATT+TGG + chr2_1:61371066-61371085 Msa0215820:intron 30.0%
! TTGCATATGGATTTGTTCAA+TGG + chr2_1:61371184-61371203 Msa0215820:intron 30.0%
TTGCAACTTCTATTTCACTA+TGG + chr2_1:61371235-61371254 Msa0215820:intron 30.0%
TGGATATCTATGATATTGGT+AGG + chr2_1:61371255-61371274 Msa0215820:intron 30.0%
AAGTTTAAGAATACATGGAG+AGG + chr2_1:61364455-61364474 Msa0215820:CDS 30.0%
TTGGTCATGATATATGGATT+CGG + chr2_1:61365858-61365877 Msa0215820:intron 30.0%
TAGATGTCTTTAATACTGCA+GGG + chr2_1:61371758-61371777 Msa0215820:intron 30.0%
CAATGAGATAAAAAGTTGCA+AGG - chr2_1:61366123-61366142 None:intergenic 30.0%
! CTTGCAACTTTTTATCTCAT+TGG + chr2_1:61366121-61366140 Msa0215820:CDS 30.0%
TTACCAATTTCATGTATCCT+TGG + chr2_1:61366145-61366164 Msa0215820:CDS 30.0%
AATCCAAGGATACATGAAAT+TGG - chr2_1:61366151-61366170 None:intergenic 30.0%
!! TCAAATTGGTCTTAAATCCA+AGG - chr2_1:61371870-61371889 None:intergenic 30.0%
! ATGATTTAGGGTTTATGGAT+TGG + chr2_1:61366298-61366317 Msa0215820:intron 30.0%
! TTTTGACAAGATATGCCAAA+TGG + chr2_1:61366362-61366381 Msa0215820:CDS 30.0%
TCAGAGTAAGATAGTTCACA+TGG + chr2_1:61362750-61362769 Msa0215820:CDS 35.0%
AACCTCAAATGGAGAAGAAA+TGG + chr2_1:61362815-61362834 Msa0215820:CDS 35.0%
! GAAATGGTGGAACAAAATCT+TGG + chr2_1:61362831-61362850 Msa0215820:CDS 35.0%
AGGTTTGTGCACGATTATTA+AGG + chr2_1:61363198-61363217 Msa0215820:intron 35.0%
GACAATTATTGTGAGACGAA+AGG + chr2_1:61363416-61363435 Msa0215820:intron 35.0%
!! GTGATTTTGGCCCTTTATTT+TGG - chr2_1:61363711-61363730 None:intergenic 35.0%
!!! TCGCAACGTTTTGAAACATA+AGG + chr2_1:61363881-61363900 Msa0215820:intron 35.0%
!!! CGCAACGTTTTGAAACATAA+GGG + chr2_1:61363882-61363901 Msa0215820:intron 35.0%
!!! GCAACGTTTTGAAACATAAG+GGG + chr2_1:61363883-61363902 Msa0215820:intron 35.0%
!!! CAACGTTTTGAAACATAAGG+GGG + chr2_1:61363884-61363903 Msa0215820:intron 35.0%
GACAACATTTACGTCCTATT+TGG - chr2_1:61363946-61363965 None:intergenic 35.0%
ACACCAGGATTATTTGCATT+TGG + chr2_1:61364221-61364240 Msa0215820:CDS 35.0%
AAACCTCAACATGTTTCTCA+AGG - chr2_1:61364249-61364268 None:intergenic 35.0%
TACCAACATGAACAATTGCT+GGG - chr2_1:61364319-61364338 None:intergenic 35.0%
ATACCAACATGAACAATTGC+TGG - chr2_1:61364320-61364339 None:intergenic 35.0%
GTTCATGTTGGTATTGCATA+TGG + chr2_1:61364326-61364345 Msa0215820:CDS 35.0%
! TATGGATTTGTTCATTGGTC+AGG + chr2_1:61364344-61364363 Msa0215820:CDS 35.0%
TGGTCAGGTCTTAATTTCAA+AGG + chr2_1:61364359-61364378 Msa0215820:CDS 35.0%
TCAGGTCTTAATTTCAAAGG+TGG + chr2_1:61364362-61364381 Msa0215820:CDS 35.0%
TGTGAAATAGAAGTTGCAAC+TGG - chr2_1:61364389-61364408 None:intergenic 35.0%
AAAGGGACAAACAAAGTGAA+AGG - chr2_1:61364570-61364589 None:intergenic 35.0%
! CGCCTAAAATATTAGCTTCT+TGG + chr2_1:61364617-61364636 Msa0215820:intron 35.0%
CGTTCATTGTTAGGATGTAA+AGG + chr2_1:61364709-61364728 Msa0215820:intron 35.0%
TCTCATCTTACAAGTCAGTT+TGG + chr2_1:61364802-61364821 Msa0215820:intron 35.0%
ATCTTACAAGTCAGTTTGGT+AGG + chr2_1:61364806-61364825 Msa0215820:intron 35.0%
CAGTTTGGTAGGATTAAGTA+AGG + chr2_1:61364817-61364836 Msa0215820:intron 35.0%
CTTATCTCTACTAGACAATG+TGG - chr2_1:61365058-61365077 None:intergenic 35.0%
!! TTTTGCAAGTTTGGAGTCTT+TGG + chr2_1:61365229-61365248 Msa0215820:intron 35.0%
! GTTAACATACTCTCTTTTGC+CGG + chr2_1:61365482-61365501 Msa0215820:intron 35.0%
AAGGCAATATGCAAAAATGC+CGG - chr2_1:61365504-61365523 None:intergenic 35.0%
TCAATAAAATGCCCCTATGA+AGG - chr2_1:61365706-61365725 None:intergenic 35.0%
AAGCAAAACATAAACCAAGG+AGG - chr2_1:61365826-61365845 None:intergenic 35.0%
AGTATGGAAATAGCAAGGAA+GGG - chr2_1:61365932-61365951 None:intergenic 35.0%
TAGTATGGAAATAGCAAGGA+AGG - chr2_1:61365933-61365952 None:intergenic 35.0%
CAAGTAGTATGGAAATAGCA+AGG - chr2_1:61365937-61365956 None:intergenic 35.0%
TTGGACAGAATCAAGTAGTA+TGG - chr2_1:61365948-61365967 None:intergenic 35.0%
ATACTACTTGATTCTGTCCA+AGG + chr2_1:61365947-61365966 Msa0215820:CDS 35.0%
TAAATGTCTTCCATACTGCA+GGG + chr2_1:61366053-61366072 Msa0215820:intron 35.0%
!! GCAAATTGGTCTTAAATCCA+AGG - chr2_1:61366165-61366184 None:intergenic 35.0%
!! TTATGGATTGGTCTGATTTG+TGG + chr2_1:61366310-61366329 Msa0215820:CDS 35.0%
!! TATGGATTGGTCTGATTTGT+GGG + chr2_1:61366311-61366330 Msa0215820:CDS 35.0%
GAGATTCAGTTTAGTCCATT+TGG - chr2_1:61366380-61366399 None:intergenic 35.0%
!! AATGGTATTTCTGGCTAACT+TGG - chr2_1:61366891-61366910 None:intergenic 35.0%
! CGTAAGGAAGGTTTTCTTAA+TGG - chr2_1:61366909-61366928 None:intergenic 35.0%
AAACAGAGAAGGAGCTATTA+CGG - chr2_1:61366947-61366966 None:intergenic 35.0%
AGGCAGAGAAACAACAAAAA+AGG - chr2_1:61367015-61367034 Msa0215830:CDS 35.0%
TCAAACAAAGGATCAGTTGA+AGG - chr2_1:61367035-61367054 Msa0215830:CDS 35.0%
AGGGTTCAAAGTTCAAACAA+AGG - chr2_1:61367047-61367066 Msa0215830:CDS 35.0%
CTATTGCTAAAAAGGAAGCA+TGG - chr2_1:61367187-61367206 Msa0215830:CDS 35.0%
AAGAAGAATGATCCTGAGAA+GGG - chr2_1:61367215-61367234 Msa0215830:CDS 35.0%
TGAAAGAGCTAAGAAGTTAG+AGG - chr2_1:61367243-61367262 Msa0215830:CDS 35.0%
TTCAGAATGGTGAAATGCAA+GGG - chr2_1:61367295-61367314 Msa0215830:CDS 35.0%
GGCAATGTTAAACTTCAGAA+TGG - chr2_1:61367308-61367327 Msa0215830:CDS 35.0%
!! AAGCTCTTTTAAAGACTCTG+TGG + chr2_1:61367334-61367353 Msa0215820:intron 35.0%
! TTTTCCAGATTTGCACAGTT+AGG + chr2_1:61367416-61367435 Msa0215820:intron 35.0%
ATCGCAAACTTGAAGAGTTT+CGG - chr2_1:61367448-61367467 Msa0215830:CDS 35.0%
GAAAAAATGAATGACAGCGA+TGG - chr2_1:61367557-61367576 None:intergenic 35.0%
! TTCCCAAGCATTCTTTGAAA+AGG + chr2_1:61367579-61367598 Msa0215820:intron 35.0%
! GTCCTTTTCAAAGAATGCTT+GGG - chr2_1:61367584-61367603 None:intergenic 35.0%
! TGTCCTTTTCAAAGAATGCT+TGG - chr2_1:61367585-61367604 None:intergenic 35.0%
! AAGCATTCTTTGAAAAGGAC+AGG + chr2_1:61367584-61367603 Msa0215820:intron 35.0%
! ATTCTTTGAAAAGGACAGGA+TGG + chr2_1:61367588-61367607 Msa0215820:intron 35.0%
! GTTGGTAGATAAAACTTAGC+TGG + chr2_1:61367746-61367765 Msa0215820:intron 35.0%
GAGATTAAGAAGAAGCTGAA+GGG - chr2_1:61367857-61367876 Msa0215840:CDS 35.0%
! AGAATGCCAACATGTGATTT+TGG - chr2_1:61368075-61368094 None:intergenic 35.0%
ATCACATGTTGGCATTCTAA+TGG + chr2_1:61368077-61368096 Msa0215820:intron 35.0%
TAGTTAGTAAACCCTCCTTT+GGG - chr2_1:61368115-61368134 None:intergenic 35.0%
TTAGTTAGTAAACCCTCCTT+TGG - chr2_1:61368116-61368135 None:intergenic 35.0%
AAGGAGGGTTTACTAACTAA+AGG + chr2_1:61368116-61368135 Msa0215820:intron 35.0%
AGGCCATTTCAAATGGTTAA+AGG - chr2_1:61368148-61368167 None:intergenic 35.0%
! TTAACCATTTGAAATGGCCT+AGG + chr2_1:61368148-61368167 Msa0215820:intron 35.0%
! TTAAATGGTGATGTGGATTC+AGG - chr2_1:61368195-61368214 None:intergenic 35.0%
TATGCTGAAAAATGGCTTAC+GGG - chr2_1:61368421-61368440 None:intergenic 35.0%
GAAATTCGTATGGTGTTCAT+TGG - chr2_1:61368588-61368607 None:intergenic 35.0%
!! TGTTGATGTATTTTGAGCTG+TGG - chr2_1:61368655-61368674 None:intergenic 35.0%
GAGCTTAGGAATCACATTTA+AGG - chr2_1:61368730-61368749 None:intergenic 35.0%
! TTTTGATGCATAAGGAGCTT+AGG - chr2_1:61368744-61368763 None:intergenic 35.0%
!! TTCTTGAAGCATTGAATTGC+AGG + chr2_1:61368800-61368819 Msa0215820:intron 35.0%
! TTTTTGCAAAGAAGAGTGAG+AGG + chr2_1:61368958-61368977 Msa0215820:intron 35.0%
! TTTTGCAAAGAAGAGTGAGA+GGG + chr2_1:61368959-61368978 Msa0215820:intron 35.0%
! AATCATCATGGATTATGCCT+TGG - chr2_1:61369059-61369078 None:intergenic 35.0%
!!! GGTTTTTTTTAGTGGTGGTT+AGG + chr2_1:61369110-61369129 Msa0215820:intron 35.0%
AAAGGGAAGTGATACATACA+GGG - chr2_1:61369346-61369365 None:intergenic 35.0%
TATCACTTCCCTTTGCTTAA+GGG + chr2_1:61369352-61369371 Msa0215820:intron 35.0%
TCAGAGTAAGATAGTTCACA+TGG + chr2_1:61362750-61362769 Msa0215820:CDS 35.0%
CACCATTTCTTCTCTATTTG+AGG - chr2_1:61369585-61369604 None:intergenic 35.0%
CTCAAATAGAGAAGAAATGG+TGG + chr2_1:61369583-61369602 Msa0215820:intron 35.0%
! GAAATGGTGGAACAAAATCT+TGG + chr2_1:61362831-61362850 Msa0215820:CDS 35.0%
CAGATTCAATCAAAATAGGG+TGG - chr2_1:61370032-61370051 None:intergenic 35.0%
!!! CCGCCTATTTTGATTGAATA+TGG + chr2_1:61370089-61370108 Msa0215820:intron 35.0%
AAACCTCAACATGTTTCTCA+AGG - chr2_1:61364249-61364268 None:intergenic 35.0%
! TATGGATTTGTTCAATGGTC+AGG + chr2_1:61371189-61371208 Msa0215820:intron 35.0%
TGGTCAGGTCTTAATTTCAA+AGG + chr2_1:61364359-61364378 Msa0215820:CDS 35.0%
TCAGGTCTTAATTTCAAAGG+TGG + chr2_1:61364362-61364381 Msa0215820:CDS 35.0%
AGTGAAATAGAAGTTGCAAC+TGG - chr2_1:61371234-61371253 None:intergenic 35.0%
AAAGGGACAAACAAAGTGAA+AGG - chr2_1:61364570-61364589 None:intergenic 35.0%
! CGCCTAAAATATTAGCTTCT+TGG + chr2_1:61364617-61364636 Msa0215820:intron 35.0%
TCAAAGCAAAACAGAAACCA+AGG - chr2_1:61371534-61371553 None:intergenic 35.0%
GCAAACTTATGTTTGATCGT+AGG - chr2_1:61371604-61371623 None:intergenic 35.0%
AGTATGGAAATAGCAAGGAA+GGG - chr2_1:61365932-61365951 None:intergenic 35.0%
TAGTATGGAAATAGCAAGGA+AGG - chr2_1:61365933-61365952 None:intergenic 35.0%
CAAGTAGTATGGAAATAGCA+AGG - chr2_1:61365937-61365956 None:intergenic 35.0%
TTGGACAGAATCAAGTAGTA+TGG - chr2_1:61365948-61365967 None:intergenic 35.0%
ATACTACTTGATTCTGTCCA+AGG + chr2_1:61365947-61365966 Msa0215820:CDS 35.0%
GTAGATGTCTTTAATACTGC+AGG + chr2_1:61371757-61371776 Msa0215820:intron 35.0%
AGATGTCTTTAATACTGCAG+GGG + chr2_1:61371759-61371778 Msa0215820:intron 35.0%
!! TTATGGATTGGTCTGATTTG+TGG + chr2_1:61366310-61366329 Msa0215820:CDS 35.0%
!! TATGGATTGGTCTGATTTGT+GGG + chr2_1:61366311-61366330 Msa0215820:CDS 35.0%
GAGATTCAGTTTAGTCCATT+TGG - chr2_1:61366380-61366399 None:intergenic 35.0%
ATAGTTCACATGGCAACAAG+TGG + chr2_1:61362760-61362779 Msa0215820:CDS 40.0%
ACAGAACACAGAACCTCAAA+TGG + chr2_1:61362804-61362823 Msa0215820:CDS 40.0%
CACCATTTCTTCTCCATTTG+AGG - chr2_1:61362820-61362839 None:intergenic 40.0%
CTCAAATGGAGAAGAAATGG+TGG + chr2_1:61362818-61362837 Msa0215820:CDS 40.0%
TTGGTTTCTGTCATGCTTGT+TGG + chr2_1:61362931-61362950 Msa0215820:CDS 40.0%
AAATCTTACCATAACCCCCA+CGG - chr2_1:61363019-61363038 None:intergenic 40.0%
!! AAACTTGTTGAGAAGACGTC+AGG + chr2_1:61363681-61363700 Msa0215820:intron 40.0%
GTCAGGTGTCCCAAAATAAA+GGG + chr2_1:61363698-61363717 Msa0215820:intron 40.0%
GTGCCAAATGCAAATAATCC+TGG - chr2_1:61364227-61364246 None:intergenic 40.0%
ATAGCTGAAAGGATAACCAG+TGG - chr2_1:61364296-61364315 None:intergenic 40.0%
ATCCCAGCAATTGTTCATGT+TGG + chr2_1:61364314-61364333 Msa0215820:CDS 40.0%
AGCTTCTTGGTTGAACACTA+TGG + chr2_1:61364630-61364649 Msa0215820:intron 40.0%
TCTTGGTTGAACACTATGGT+TGG + chr2_1:61364634-61364653 Msa0215820:intron 40.0%
TTTGCCTTAATTGTGACGTC+TGG + chr2_1:61364661-61364680 Msa0215820:intron 40.0%
CAATCCAGACGTCACAATTA+AGG - chr2_1:61364668-61364687 None:intergenic 40.0%
ATTGTTAGGATGTAAAGGGG+TGG + chr2_1:61364714-61364733 Msa0215820:intron 40.0%
TGGATTAACGTTAATTCCGG+TGG - chr2_1:61364949-61364968 None:intergenic 40.0%
ATGCCGCAATTAGACATCTA+TGG - chr2_1:61364969-61364988 None:intergenic 40.0%
AGATGTCTAATTGCGGCATT+TGG + chr2_1:61364970-61364989 Msa0215820:intron 40.0%
GATGTCTAATTGCGGCATTT+GGG + chr2_1:61364971-61364990 Msa0215820:intron 40.0%
TCCAGCACCTTCATTATGTT+GGG + chr2_1:61365011-61365030 Msa0215820:intron 40.0%
! TAAGGAGTGCGCATAAAGTT+TGG + chr2_1:61365081-61365100 Msa0215820:intron 40.0%
CGAAACTAACATGTAAGACG+AGG - chr2_1:61365112-61365131 None:intergenic 40.0%
!! GAAGTCTTGGTTTTCTTAGC+TGG + chr2_1:61365257-61365276 Msa0215820:CDS 40.0%
AATTCTGTGTTTGCACTGCA+TGG - chr2_1:61365406-61365425 None:intergenic 40.0%
ACAAGGGTTTCCAATGAACT+TGG + chr2_1:61365743-61365762 Msa0215820:intron 40.0%
CAAGGGTTTCCAATGAACTT+GGG + chr2_1:61365744-61365763 Msa0215820:intron 40.0%
AAGGGTTTCCAATGAACTTG+GGG + chr2_1:61365745-61365764 Msa0215820:intron 40.0%
!! ATTGCATGTTTGGCTCTTTC+TGG - chr2_1:61365779-61365798 None:intergenic 40.0%
! ACTGACTCTCATTGCATGTT+TGG - chr2_1:61365789-61365808 None:intergenic 40.0%
TCAAACCTGATAAGACACCT+TGG - chr2_1:61365967-61365986 None:intergenic 40.0%
GTAAATGTCTTCCATACTGC+AGG + chr2_1:61366052-61366071 Msa0215820:intron 40.0%
AAATGTCTTCCATACTGCAG+GGG + chr2_1:61366054-61366073 Msa0215820:intron 40.0%
TGGACTAAACTGAATCTCTC+AGG + chr2_1:61366382-61366401 Msa0215820:CDS 40.0%
CAACTGAATGCATGCCAATT+AGG + chr2_1:61366440-61366459 Msa0215820:CDS 40.0%
CTGGGTTATTCAGTCCTAAT+TGG - chr2_1:61366457-61366476 None:intergenic 40.0%
TCACTGTGGTTTCAAACACT+GGG - chr2_1:61366475-61366494 None:intergenic 40.0%
GCATGAGCGAAACTATAACT+TGG + chr2_1:61366514-61366533 Msa0215820:three_prime_UTR 40.0%
!! CACTATTTTCTAAGGGGTGT+TGG + chr2_1:61366676-61366695 Msa0215820:intron 40.0%
AACTGAGGAAGAAACAGAGA+AGG - chr2_1:61366958-61366977 None:intergenic 40.0%
GGTATGCAAATATAGCTGAG+AGG - chr2_1:61366994-61367013 None:intergenic 40.0%
GCAGAAAATCGCAGTGAAAT+GGG - chr2_1:61367075-61367094 Msa0215830:CDS 40.0%
AGCAGAAAATCGCAGTGAAA+TGG - chr2_1:61367076-61367095 Msa0215830:CDS 40.0%
AGCAGCAATGAATAGAGCTT+CGG - chr2_1:61367162-61367181 Msa0215830:CDS 40.0%
GGGTGAAGCTATTGCTAAAA+AGG - chr2_1:61367195-61367214 Msa0215830:CDS 40.0%
GAAGAAGAATGATCCTGAGA+AGG - chr2_1:61367216-61367235 Msa0215830:CDS 40.0%
!! TCTTTCAAGTTCCTTGTGCT+TGG + chr2_1:61367256-61367275 Msa0215820:intron 40.0%
GAGAAAAGTTTCCAAGCACA+AGG - chr2_1:61367270-61367289 Msa0215830:CDS 40.0%
CTTCAGAATGGTGAAATGCA+AGG - chr2_1:61367296-61367315 Msa0215830:CDS 40.0%
AAGAAAGATAGAGTTTCCGG+AGG - chr2_1:61367378-61367397 Msa0215830:CDS 40.0%
AAACTTGAAGAGTTTCGGTC+AGG - chr2_1:61367443-61367462 Msa0215830:CDS 40.0%
! CCTTTGAAGAACTACACGAA+AGG - chr2_1:61367475-61367494 Msa0215830:CDS 40.0%
CCTTTCGTGTAGTTCTTCAA+AGG + chr2_1:61367472-61367491 Msa0215820:intron 40.0%
GTTAGGGTCTGAACTCTAAA+CGG + chr2_1:61367624-61367643 Msa0215820:intron 40.0%
! TATTGGTGCTTGTCAAGACT+TGG - chr2_1:61367825-61367844 Msa0215840:CDS 40.0%
GGAGATTAAGAAGAAGCTGA+AGG - chr2_1:61367858-61367877 Msa0215840:CDS 40.0%
CTTCTTAATCTCCATCACTC+CGG + chr2_1:61367865-61367884 Msa0215820:intron 40.0%
GCTGTTACAATGAGAGATTC+CGG - chr2_1:61367887-61367906 None:intergenic 40.0%
TCTCTCATTGTAACAGCATG+AGG + chr2_1:61367890-61367909 Msa0215820:intron 40.0%
CTCTCATTGTAACAGCATGA+GGG + chr2_1:61367891-61367910 Msa0215820:intron 40.0%
TGGTACAATTCACAACCCAA+AGG + chr2_1:61368097-61368116 Msa0215820:intron 40.0%
TACAATTCACAACCCAAAGG+AGG + chr2_1:61368100-61368119 Msa0215820:intron 40.0%
ACAATTCACAACCCAAAGGA+GGG + chr2_1:61368101-61368120 Msa0215820:intron 40.0%
! TTGGGACTTAAATGGTGATG+TGG - chr2_1:61368202-61368221 None:intergenic 40.0%
GAGCTGACAGGACATTATTT+GGG - chr2_1:61368220-61368239 None:intergenic 40.0%
AATGTGATTATGGAGCTGAC+AGG - chr2_1:61368232-61368251 None:intergenic 40.0%
! TGTATGTTTCGGATTAGGGA+CGG - chr2_1:61368476-61368495 None:intergenic 40.0%
ACACTTAATTCCCTCCAGTT+TGG - chr2_1:61368509-61368528 None:intergenic 40.0%
CTGCTGTGTAAACCATGATT+GGG - chr2_1:61368555-61368574 None:intergenic 40.0%
! GCTGTGGTTGTTGTTATAAG+TGG - chr2_1:61368639-61368658 None:intergenic 40.0%
!! TTGAAGCATTGAATTGCAGG+TGG + chr2_1:61368803-61368822 Msa0215820:intron 40.0%
TCCTCTTCCTTTCCTTATGA+GGG - chr2_1:61368839-61368858 None:intergenic 40.0%
CTAGTGATTCTTCCACTCAT+GGG + chr2_1:61368878-61368897 Msa0215820:intron 40.0%
TTTGCAAAGAAGAGTGAGAG+GGG + chr2_1:61368960-61368979 Msa0215820:intron 40.0%
!!! GAGTTTTGAAGCTTGATCCT+TGG + chr2_1:61369010-61369029 Msa0215820:intron 40.0%
TTCTACTAGAGTTCGATCCA+AGG - chr2_1:61369030-61369049 None:intergenic 40.0%
! ATCATGGATTATGCCTTGGT+GGG - chr2_1:61369055-61369074 None:intergenic 40.0%
CAAAGGGAAGTGATACATAC+AGG - chr2_1:61369347-61369366 None:intergenic 40.0%
GTATCACTTCCCTTTGCTTA+AGG + chr2_1:61369351-61369370 Msa0215820:intron 40.0%
AACGTGAACCCTTAAGCAAA+GGG - chr2_1:61369363-61369382 None:intergenic 40.0%
AAACGTGAACCCTTAAGCAA+AGG - chr2_1:61369364-61369383 None:intergenic 40.0%
TTGGTTTCTGTCATGCTTGT+TGG + chr2_1:61362931-61362950 Msa0215820:CDS 40.0%
!! AATATGGATTTTGAGGGGGT+GGG + chr2_1:61370105-61370124 Msa0215820:intron 40.0%
! GGGTAAATTCCGAGTTCTAA+GGG + chr2_1:61370138-61370157 Msa0215820:intron 40.0%
!! GGTAAATTCCGAGTTCTAAG+GGG + chr2_1:61370139-61370158 Msa0215820:intron 40.0%
! GGATTTTACCCCTTAGAACT+CGG - chr2_1:61370150-61370169 None:intergenic 40.0%
GGGGTAAAATCCAGATACAA+CGG + chr2_1:61370158-61370177 Msa0215820:intron 40.0%
GGGTAAAATCCAGATACAAC+GGG + chr2_1:61370159-61370178 Msa0215820:intron 40.0%
GGTAAAATCCAGATACAACG+GGG + chr2_1:61370160-61370179 Msa0215820:intron 40.0%
TACTAGATGAGCTAAGCTCA+CGG - chr2_1:61370538-61370557 None:intergenic 40.0%
TGAGCTTAGCTCATCTAGTA+AGG + chr2_1:61370538-61370557 Msa0215820:intron 40.0%
GAGCTTAGCTCATCTAGTAA+GGG + chr2_1:61370539-61370558 Msa0215820:intron 40.0%
ACACACACACACAGATACAA+GGG + chr2_1:61370661-61370680 Msa0215820:intron 40.0%
! TAAGGTCATGTTGTTTGCCT+AGG + chr2_1:61370828-61370847 Msa0215820:intron 40.0%
!! TTTGCCTAGGTTGGTTTAAG+TGG + chr2_1:61370841-61370860 Msa0215820:intron 40.0%
GTGCCAAATGCAAATAATCC+TGG - chr2_1:61364227-61364246 None:intergenic 40.0%
ACAATCTGTAGTAATGCCAC+TGG + chr2_1:61371122-61371141 Msa0215820:intron 40.0%
TACCAACATGAGCAATTGCT+GGG - chr2_1:61371164-61371183 None:intergenic 40.0%
ATACCAACATGAGCAATTGC+TGG - chr2_1:61371165-61371184 None:intergenic 40.0%
GCTCATGTTGGTATTGCATA+TGG + chr2_1:61371171-61371190 Msa0215820:intron 40.0%
AGCTTCTTGGTTGAACACTA+TGG + chr2_1:61364630-61364649 Msa0215820:intron 40.0%
TCTTGGTTGAACACTATGGT+TGG + chr2_1:61364634-61364653 Msa0215820:intron 40.0%
AAGCAAAACAGAAACCAAGG+AGG - chr2_1:61371531-61371550 None:intergenic 40.0%
TCAAACCTGATAAGACACCT+TGG - chr2_1:61365967-61365986 None:intergenic 40.0%
TGGACTAAACTGAATCTCTC+AGG + chr2_1:61366382-61366401 Msa0215820:CDS 40.0%
CAGGGTTATTCAGTCCTAAT+TGG - chr2_1:61372162-61372181 None:intergenic 40.0%
TCACTGTGGTTTCAAACACA+GGG - chr2_1:61372180-61372199 None:intergenic 40.0%
GCATGAGCGAAACTATAACT+TGG + chr2_1:61366514-61366533 Msa0215820:three_prime_UTR 40.0%
!! CACTGTTTTCTAATGGGTGT+TGG + chr2_1:61372381-61372400 Msa0215820:three_prime_UTR 40.0%
GCAACAAGTGGCATTTCAGA+TGG + chr2_1:61362772-61362791 Msa0215820:CDS 45.0%
! GTCATGCTTGTTGGTCATCT+TGG + chr2_1:61362940-61362959 Msa0215820:CDS 45.0%
ACTCTTGCTAACTCCTGGTT+TGG + chr2_1:61362985-61363004 Msa0215820:CDS 45.0%
CGTCAGGTGTCCCAAAATAA+AGG + chr2_1:61363697-61363716 Msa0215820:intron 45.0%
!! GGTTGGTTTAAGTGGTGCAT+TGG + chr2_1:61364004-61364023 Msa0215820:intron 45.0%
GCACCTTGAGAAACATGTTG+AGG + chr2_1:61364243-61364262 Msa0215820:CDS 45.0%
ACAATCTGTAGTGATGCCAC+TGG + chr2_1:61364277-61364296 Msa0215820:CDS 45.0%
CAATTGCTGGGATAGCTGAA+AGG - chr2_1:61364307-61364326 None:intergenic 45.0%
TACCATAGCATTGCTGCAGA+GGG - chr2_1:61364533-61364552 None:intergenic 45.0%
ATACCATAGCATTGCTGCAG+AGG - chr2_1:61364534-61364553 None:intergenic 45.0%
CTAACAATGAACGCGATGGA+TGG - chr2_1:61364702-61364721 None:intergenic 45.0%
CATCCATCGCGTTCATTGTT+AGG + chr2_1:61364700-61364719 Msa0215820:intron 45.0%
CATCCTAACAATGAACGCGA+TGG - chr2_1:61364706-61364725 None:intergenic 45.0%
!! CAACATAATGAAGGTGCTGG+AGG - chr2_1:61365012-61365031 None:intergenic 45.0%
CTCCAGCACCTTCATTATGT+TGG + chr2_1:61365010-61365029 Msa0215820:intron 45.0%
! ACCCAACATAATGAAGGTGC+TGG - chr2_1:61365015-61365034 None:intergenic 45.0%
CCTCACACCCAACATAATGA+AGG - chr2_1:61365021-61365040 None:intergenic 45.0%
CCTTCATTATGTTGGGTGTG+AGG + chr2_1:61365018-61365037 Msa0215820:intron 45.0%
TCATTATGTTGGGTGTGAGG+AGG + chr2_1:61365021-61365040 Msa0215820:intron 45.0%
!! GTCTTTGGCCTTTGAAGTCT+TGG + chr2_1:61365244-61365263 Msa0215820:CDS 45.0%
ATCACACAATCACGTTGTCG+TGG - chr2_1:61365666-61365685 None:intergenic 45.0%
!! CATGTTTGGCTCTTTCTGGT+TGG - chr2_1:61365775-61365794 None:intergenic 45.0%
! TCTGTCCAAGGTGTCTTATC+AGG + chr2_1:61365959-61365978 Msa0215820:CDS 45.0%
GTCACTGTGGTTTCAAACAC+TGG - chr2_1:61366476-61366495 None:intergenic 45.0%
ATCTAAAGGAGCTGTCACTG+TGG - chr2_1:61366489-61366508 None:intergenic 45.0%
TGACAGCTCCTTTAGATGCA+CGG + chr2_1:61366492-61366511 Msa0215820:three_prime_UTR 45.0%
GGATTTGAAGGTCGTAAGGA+AGG - chr2_1:61366921-61366940 None:intergenic 45.0%
TCCTTACGACCTTCAAATCC+AGG + chr2_1:61366921-61366940 Msa0215820:intron 45.0%
CTATTACGGCCTGGATTTGA+AGG - chr2_1:61366933-61366952 None:intergenic 45.0%
GAATAGAGCTTCGGGAATCA+AGG - chr2_1:61367153-61367172 Msa0215830:CDS 45.0%
GCAGCAATGAATAGAGCTTC+GGG - chr2_1:61367161-61367180 Msa0215830:CDS 45.0%
AGGTCCTAACTGTGCAAATC+TGG - chr2_1:61367423-61367442 Msa0215830:CDS 45.0%
TGCGGTTAAGCCTTTCATGT+CGG - chr2_1:61367525-61367544 Msa0215830:CDS 45.0%
AATGAATGACAGCGATGGAG+AGG - chr2_1:61367552-61367571 None:intergenic 45.0%
!! ATGGTTGCAGTTGGCTTGTT+AGG + chr2_1:61367607-61367626 Msa0215820:intron 45.0%
!! TGGTTGCAGTTGGCTTGTTA+GGG + chr2_1:61367608-61367627 Msa0215820:intron 45.0%
! AAGCAAGGGTGCAAAAGCTA+AGG - chr2_1:61367693-61367712 Msa0215840:CDS 45.0%
TGGTTTCAGGGTCTAAGCAA+GGG - chr2_1:61367707-61367726 Msa0215840:CDS 45.0%
ATGGTTTCAGGGTCTAAGCA+AGG - chr2_1:61367708-61367727 Msa0215840:CDS 45.0%
TTGCTTAGACCCTGAAACCA+TGG + chr2_1:61367707-61367726 Msa0215820:intron 45.0%
AACGAGAAGCCATGGTTTCA+GGG - chr2_1:61367719-61367738 Msa0215840:CDS 45.0%
TAACGAGAAGCCATGGTTTC+AGG - chr2_1:61367720-61367739 Msa0215840:CDS 45.0%
! CTGATGATAACGAGAAGCCA+TGG - chr2_1:61367727-61367746 Msa0215840:CDS 45.0%
GGCTTCTCGTTATCATCAGT+TGG + chr2_1:61367728-61367747 Msa0215820:intron 45.0%
!! CTGAAGGGTGTTGCAGATAT+TGG - chr2_1:61367842-61367861 Msa0215840:CDS 45.0%
AATGAGAGATTCCGGAGTGA+TGG - chr2_1:61367879-61367898 None:intergenic 45.0%
GGAGCTGACAGGACATTATT+TGG - chr2_1:61368221-61368240 None:intergenic 45.0%
AATGGCTTACGGGTTTGACA+TGG - chr2_1:61368411-61368430 None:intergenic 45.0%
GCTGCTGTGTAAACCATGAT+TGG - chr2_1:61368556-61368575 None:intergenic 45.0%
CTCCTCTTCCTTTCCTTATG+AGG - chr2_1:61368840-61368859 None:intergenic 45.0%
CCATGAGTGGAAGAATCACT+AGG - chr2_1:61368880-61368899 None:intergenic 45.0%
CCTAGTGATTCTTCCACTCA+TGG + chr2_1:61368877-61368896 Msa0215820:intron 45.0%
TTGAGAGAGTGATGAAGGGA+GGG + chr2_1:61368986-61369005 Msa0215820:intron 45.0%
! TCATGGATTATGCCTTGGTG+GGG - chr2_1:61369054-61369073 None:intergenic 45.0%
! CATCATGGATTATGCCTTGG+TGG - chr2_1:61369056-61369075 None:intergenic 45.0%
ATAGTTCACATGGCAGCAAG+TGG + chr2_1:61369525-61369544 Msa0215820:intron 45.0%
! GTCATGCTTGTTGGTCATCT+TGG + chr2_1:61362940-61362959 Msa0215820:CDS 45.0%
ACTCTTGCTAACTCGTGGTT+TGG + chr2_1:61369750-61369769 Msa0215820:intron 45.0%
!! GAATATGGATTTTGAGGGGG+TGG + chr2_1:61370104-61370123 Msa0215820:intron 45.0%
!! ATATGGATTTTGAGGGGGTG+GGG + chr2_1:61370106-61370125 Msa0215820:intron 45.0%
GGGGTAAATTCCGAGTTCTA+AGG + chr2_1:61370137-61370156 Msa0215820:intron 45.0%
ACTAGATGAGCTAAGCTCAC+GGG - chr2_1:61370537-61370556 None:intergenic 45.0%
GACACACACACACAGATACA+AGG + chr2_1:61370660-61370679 Msa0215820:intron 45.0%
! GTCATGTTGTTTGCCTAGGT+TGG + chr2_1:61370832-61370851 Msa0215820:intron 45.0%
TGCACCACTTAAACCAACCT+AGG - chr2_1:61364003-61364022 None:intergenic 45.0%
!! GGTTGGTTTAAGTGGTGCAT+TGG + chr2_1:61364004-61364023 Msa0215820:intron 45.0%
GCACCTTGAGAAACATGTTG+AGG + chr2_1:61364243-61364262 Msa0215820:CDS 45.0%
ATAGCTGAAAGGACAACCAG+TGG - chr2_1:61371141-61371160 None:intergenic 45.0%
CAATTGCTGGGATAGCTGAA+AGG - chr2_1:61364307-61364326 None:intergenic 45.0%
ATCCCAGCAATTGCTCATGT+TGG + chr2_1:61371159-61371178 Msa0215820:intron 45.0%
TACCATAGCATTGCTGCAGA+GGG - chr2_1:61364533-61364552 None:intergenic 45.0%
ATACCATAGCATTGCTGCAG+AGG - chr2_1:61364534-61364553 None:intergenic 45.0%
!! GGAGGAAAGCGTCACAATTA+AGG - chr2_1:61371513-61371532 None:intergenic 45.0%
AATTGTGACGCTTTCCTCCT+TGG + chr2_1:61371514-61371533 Msa0215820:intron 45.0%
! TCTGTCCAAGGTGTCTTATC+AGG + chr2_1:61365959-61365978 Msa0215820:CDS 45.0%
TGTCTTTAATACTGCAGGGG+TGG + chr2_1:61371762-61371781 Msa0215820:intron 45.0%
ACTGAATCTCTCAGGAGACA+AGG + chr2_1:61366390-61366409 Msa0215820:CDS 45.0%
CGACTGAATGCATGCCAATT+AGG + chr2_1:61372145-61372164 Msa0215820:intron 45.0%
GTCACTGTGGTTTCAAACAC+AGG - chr2_1:61366476-61366495 None:intergenic 45.0%
ATCTAAAGGAGCTGTCACTG+TGG - chr2_1:61366489-61366508 None:intergenic 45.0%
TGACAGCTCCTTTAGATGCA+CGG + chr2_1:61366492-61366511 Msa0215820:three_prime_UTR 45.0%
!!! TTTTATTTTCATTTTTTATT+AGG + chr2_1:61363559-61363578 Msa0215820:intron 5.0%
CTTGGTGAGCTTCAGTTAGC+TGG + chr2_1:61362958-61362977 Msa0215820:CDS 50.0%
! GTGCTACTCTTGCTAACTCC+TGG + chr2_1:61362980-61362999 Msa0215820:CDS 50.0%
ACACTCTGCGGACAAGGATA+TGG + chr2_1:61364029-61364048 Msa0215820:CDS 50.0%
TTCCCTCTGCAGCAATGCTA+TGG + chr2_1:61364528-61364547 Msa0215820:CDS 50.0%
CTATCGCACATGCTTCATGC+CGG + chr2_1:61364899-61364918 Msa0215820:intron 50.0%
TTATGTTGGGTGTGAGGAGG+TGG + chr2_1:61365024-61365043 Msa0215820:intron 50.0%
ACGTAGACCAGCTAACCTTG+CGG - chr2_1:61365464-61365483 None:intergenic 50.0%
GTTTCCAATGAACTTGGGGC+AGG + chr2_1:61365749-61365768 Msa0215820:intron 50.0%
CTAAAGCTCTCTCTCCTCCT+TGG + chr2_1:61365809-61365828 Msa0215820:intron 50.0%
!! GATTGGTCTGATTTGTGGGC+TGG + chr2_1:61366315-61366334 Msa0215820:CDS 50.0%
GCCTGGATTTGAAGGTCGTA+AGG - chr2_1:61366925-61366944 None:intergenic 50.0%
CGCAGTGAAATGGGAAGAGA+GGG - chr2_1:61367066-61367085 Msa0215830:CDS 50.0%
TCGCAGTGAAATGGGAAGAG+AGG - chr2_1:61367067-61367086 Msa0215830:CDS 50.0%
GCAATAGCTTCACCCTTCTC+AGG + chr2_1:61367200-61367219 Msa0215820:intron 50.0%
TCCTTTACCACCTTCTCCTC+CGG + chr2_1:61367359-61367378 Msa0215820:intron 50.0%
GATAGAGTTTCCGGAGGAGA+AGG - chr2_1:61367372-61367391 Msa0215830:CDS 50.0%
TAAGCCTTTCATGTCGGGGT+TGG - chr2_1:61367519-61367538 Msa0215830:CDS 50.0%
CGGTTAAGCCTTTCATGTCG+GGG - chr2_1:61367523-61367542 Msa0215830:CDS 50.0%
GCGGTTAAGCCTTTCATGTC+GGG - chr2_1:61367524-61367543 Msa0215830:CDS 50.0%
AATGACAGCGATGGAGAGGA+AGG - chr2_1:61367548-61367567 Msa0215830:CDS 50.0%
AAGGACAGGATGGTTGCAGT+TGG + chr2_1:61367598-61367617 Msa0215820:intron 50.0%
CGAGCCTAGGCCATTTCAAA+TGG - chr2_1:61368155-61368174 None:intergenic 50.0%
TGCAAAAGTGAGACGAGCCT+AGG - chr2_1:61368168-61368187 None:intergenic 50.0%
GCATTGAATTGCAGGTGGTG+AGG + chr2_1:61368808-61368827 Msa0215820:intron 50.0%
GAATTGCAGGTGGTGAGGTT+CGG + chr2_1:61368813-61368832 Msa0215820:intron 50.0%
GCCCTCATAAGGAAAGGAAG+AGG + chr2_1:61368835-61368854 Msa0215820:intron 50.0%
!!! GCTTTTGGAGTACCCATGAG+TGG - chr2_1:61368893-61368912 None:intergenic 50.0%
GCGGTTGAGAGAGTGATGAA+GGG + chr2_1:61368982-61369001 Msa0215820:intron 50.0%
GTTGAGAGAGTGATGAAGGG+AGG + chr2_1:61368985-61369004 Msa0215820:intron 50.0%
CTCTAGTAGAAACCCCACCA+AGG + chr2_1:61369039-61369058 Msa0215820:intron 50.0%
GCAGCAAGTGGCATTTCAGA+TGG + chr2_1:61369537-61369556 Msa0215820:intron 50.0%
CTTGGTGAGCTTCAGTTAGC+CGG + chr2_1:61362958-61362977 Msa0215820:CDS 50.0%
CGAGTTAGCAAGAGTAGCAC+CGG - chr2_1:61369745-61369764 None:intergenic 50.0%
! GTGCTACTCTTGCTAACTCG+TGG + chr2_1:61369745-61369764 Msa0215820:intron 50.0%
AGAAGTTACCATGACCCCCA+CGG - chr2_1:61369784-61369803 None:intergenic 50.0%
!! TATGGATTTTGAGGGGGTGG+GGG + chr2_1:61370107-61370126 Msa0215820:intron 50.0%
CAGTTTGACCCCGTTGTATC+TGG - chr2_1:61370171-61370190 None:intergenic 50.0%
AAGCTCACGGGACTACCTTA+TGG - chr2_1:61370525-61370544 None:intergenic 50.0%
ACACACACAGATACAAGGGC+CGG + chr2_1:61370665-61370684 Msa0215820:intron 50.0%
! ATGAATAAGTGGGGTGTCCG+AGG - chr2_1:61370699-61370718 None:intergenic 50.0%
ACACTCTGCGGACAAGGATA+TGG + chr2_1:61364029-61364048 Msa0215820:CDS 50.0%
TTCCCTCTGCAGCAATGCTA+TGG + chr2_1:61364528-61364547 Msa0215820:CDS 50.0%
!! GATTGGTCTGATTTGTGGGC+TGG + chr2_1:61366315-61366334 Msa0215820:CDS 50.0%
TTCTCCGCACGTTGAGTCTA+AGG - chr2_1:61372247-61372266 None:intergenic 50.0%
!! TGGTTTGGTGTCACTGCCGT+GGG + chr2_1:61363000-61363019 Msa0215820:CDS 55.0%
GGTGCATTGGACACACTCTG+CGG + chr2_1:61364017-61364036 Msa0215820:CDS 55.0%
TTGGACACACTCTGCGGACA+AGG + chr2_1:61364023-61364042 Msa0215820:CDS 55.0%
ATGCTTCATGCCGGAGCATG+AGG + chr2_1:61364908-61364927 Msa0215820:intron 55.0%
TGCTTCATGCCGGAGCATGA+GGG + chr2_1:61364909-61364928 Msa0215820:intron 55.0%
GGGTGTGTTGGAAGTTCCAC+CGG + chr2_1:61364930-61364949 Msa0215820:intron 55.0%
!! GAAGGTGCTGGAGGATGCAA+CGG - chr2_1:61365003-61365022 None:intergenic 55.0%
! ATGGTCTTAGTGCAGCCGCA+AGG + chr2_1:61365446-61365465 Msa0215820:CDS 55.0%
TTGGCCTGCCCCAAGTTCAT+TGG - chr2_1:61365756-61365775 None:intergenic 55.0%
TGTCTTCCATACTGCAGGGG+TGG + chr2_1:61366057-61366076 Msa0215820:intron 55.0%
CTCTAACCACCCCTGCAGTA+TGG - chr2_1:61366066-61366085 None:intergenic 55.0%
GGGTGGTTAGAGCATGTGGT+TGG + chr2_1:61366074-61366093 Msa0215820:CDS 55.0%
CGCTCATGCCGTGCATCTAA+AGG - chr2_1:61366503-61366522 None:intergenic 55.0%
GAGAAGGAGCTATTACGGCC+TGG - chr2_1:61366942-61366961 None:intergenic 55.0%
GGAGGAGAAGGTGGTAAAGG+AGG - chr2_1:61367360-61367379 Msa0215830:CDS 55.0%
TCCGGAGGAGAAGGTGGTAA+AGG - chr2_1:61367363-61367382 Msa0215830:CDS 55.0%
AGAGTTTCCGGAGGAGAAGG+TGG - chr2_1:61367369-61367388 Msa0215830:CDS 55.0%
CGGGGTTGGAAGCAGATGAT+CGG - chr2_1:61367505-61367524 Msa0215830:CDS 55.0%
GCTTCCAACCCCGACATGAA+AGG + chr2_1:61367512-61367531 Msa0215820:intron 55.0%
GGTTCGGCCCTCATAAGGAA+AGG + chr2_1:61368829-61368848 Msa0215820:intron 55.0%
GCAAAGAAGAGTGAGAGGGG+CGG + chr2_1:61368963-61368982 Msa0215820:intron 55.0%
GGCGGTTGAGAGAGTGATGA+AGG + chr2_1:61368981-61369000 Msa0215820:intron 55.0%
! GCAGCAGACATTTTACGCCG+GGG - chr2_1:61369324-61369343 None:intergenic 55.0%
! GGCAGCAGACATTTTACGCC+GGG - chr2_1:61369325-61369344 None:intergenic 55.0%
! GGGCAGCAGACATTTTACGC+CGG - chr2_1:61369326-61369345 None:intergenic 55.0%
!! TGGTTTGGTGTCACTGCCGT+GGG + chr2_1:61363000-61363019 Msa0215820:CDS 55.0%
CACACACAGATACAAGGGCC+GGG + chr2_1:61370666-61370685 Msa0215820:intron 55.0%
ACACACAGATACAAGGGCCG+GGG + chr2_1:61370667-61370686 Msa0215820:intron 55.0%
GGTGCATTGGACACACTCTG+CGG + chr2_1:61364017-61364036 Msa0215820:CDS 55.0%
TTGGACACACTCTGCGGACA+AGG + chr2_1:61364023-61364042 Msa0215820:CDS 55.0%
CGCTCATGCCGTGCATCTAA+AGG - chr2_1:61366503-61366522 None:intergenic 55.0%
GGAGCCTTAGACTCAACGTG+CGG + chr2_1:61372240-61372259 Msa0215820:intron 55.0%
CACGGCAGTGACACCAAACC+AGG - chr2_1:61363001-61363020 None:intergenic 60.0%
!! CTGGTTTGGTGTCACTGCCG+TGG + chr2_1:61362999-61363018 Msa0215820:CDS 60.0%
!! GGTTTGGTGTCACTGCCGTG+GGG + chr2_1:61363001-61363020 Msa0215820:CDS 60.0%
!! GTTTGGTGTCACTGCCGTGG+GGG + chr2_1:61363002-61363021 Msa0215820:CDS 60.0%
TGTCACTGCCGTGGGGGTTA+TGG + chr2_1:61363008-61363027 Msa0215820:CDS 60.0%
GCTTCATGCCGGAGCATGAG+GGG + chr2_1:61364910-61364929 Msa0215820:intron 60.0%
CCAACACACCCCTCATGCTC+CGG - chr2_1:61364921-61364940 None:intergenic 60.0%
AGTGCAGCCGCAAGGTTAGC+TGG + chr2_1:61365454-61365473 Msa0215820:intron 60.0%
GCAGGGGTGGTTAGAGCATG+TGG + chr2_1:61366070-61366089 Msa0215820:intron 60.0%
CAGCGATGGAGAGGAAGGTG+CGG - chr2_1:61367543-61367562 Msa0215830:CDS 60.0%
GGTGAGGTTCGGCCCTCATA+AGG + chr2_1:61368824-61368843 Msa0215820:intron 60.0%
!! GTGGTTTGGTGTCACTGCCG+TGG + chr2_1:61369764-61369783 Msa0215820:intron 60.0%
!! GGTTTGGTGTCACTGCCGTG+GGG + chr2_1:61363001-61363020 Msa0215820:CDS 60.0%
!! GTTTGGTGTCACTGCCGTGG+GGG + chr2_1:61363002-61363021 Msa0215820:CDS 60.0%
!! GATTTTGAGGGGGTGGGGGT+GGG + chr2_1:61370111-61370130 Msa0215820:intron 60.0%
!! ATTTTGAGGGGGTGGGGGTG+GGG + chr2_1:61370112-61370131 Msa0215820:intron 60.0%
AAGGGCCGGGGTTAGAACCT+CGG + chr2_1:61370679-61370698 Msa0215820:intron 60.0%
! GGTGTCCGAGGTTCTAACCC+CGG - chr2_1:61370687-61370706 None:intergenic 60.0%
GCAGGGGTGGTTAGAGCATG+CGG + chr2_1:61366070-61366089 Msa0215820:intron 60.0%
GGGTGGTTAGAGCATGCGGT+TGG + chr2_1:61371779-61371798 Msa0215820:intron 60.0%
! CCGGAGCATGAGGGGTGTGT+TGG + chr2_1:61364918-61364937 Msa0215820:intron 65.0%
TGTCACTGCCGTGGGGGTCA+TGG + chr2_1:61369773-61369792 Msa0215820:intron 65.0%
!! GGATTTTGAGGGGGTGGGGG+TGG + chr2_1:61370110-61370129 Msa0215820:intron 65.0%
TGAGGGGGTGGGGGTGGGGA+TGG + chr2_1:61370116-61370135 Msa0215820:intron 75.0%
GAGGGGGTGGGGGTGGGGAT+GGG + chr2_1:61370117-61370136 Msa0215820:intron 75.0%
AGGGGGTGGGGGTGGGGATG+GGG + chr2_1:61370118-61370137 Msa0215820:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 61362616 61372503 61362616 ID=Msa0215820;Name=Msa0215820
chr2_1 mRNA 61362616 61372503 61362616 ID=Msa0215820-mRNA-1;Parent=Msa0215820;Name=Msa0215820-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.85|0.75|1|0.85|0.62|8|282|491
chr2_1 exon 61362616 61363029 61362616 ID=Msa0215820-mRNA-1:exon:16918;Parent=Msa0215820-mRNA-1
chr2_1 exon 61364005 61364549 61364005 ID=Msa0215820-mRNA-1:exon:16919;Parent=Msa0215820-mRNA-1
chr2_1 exon 61365238 61365324 61365238 ID=Msa0215820-mRNA-1:exon:16920;Parent=Msa0215820-mRNA-1
chr2_1 exon 61365411 61365467 61365411 ID=Msa0215820-mRNA-1:exon:16921;Parent=Msa0215820-mRNA-1
chr2_1 exon 61365892 61365980 61365892 ID=Msa0215820-mRNA-1:exon:16922;Parent=Msa0215820-mRNA-1
chr2_1 exon 61366074 61366192 61366074 ID=Msa0215820-mRNA-1:exon:16923;Parent=Msa0215820-mRNA-1
chr2_1 exon 61366307 61366576 61366307 ID=Msa0215820-mRNA-1:exon:16924;Parent=Msa0215820-mRNA-1
chr2_1 exon 61372327 61372503 61372327 ID=Msa0215820-mRNA-1:exon:16925;Parent=Msa0215820-mRNA-1
chr2_1 CDS 61362616 61363029 61362616 ID=Msa0215820-mRNA-1:cds;Parent=Msa0215820-mRNA-1
chr2_1 CDS 61364005 61364549 61364005 ID=Msa0215820-mRNA-1:cds;Parent=Msa0215820-mRNA-1
chr2_1 CDS 61365238 61365324 61365238 ID=Msa0215820-mRNA-1:cds;Parent=Msa0215820-mRNA-1
chr2_1 CDS 61365411 61365467 61365411 ID=Msa0215820-mRNA-1:cds;Parent=Msa0215820-mRNA-1
chr2_1 CDS 61365892 61365980 61365892 ID=Msa0215820-mRNA-1:cds;Parent=Msa0215820-mRNA-1
chr2_1 CDS 61366074 61366192 61366074 ID=Msa0215820-mRNA-1:cds;Parent=Msa0215820-mRNA-1
chr2_1 CDS 61366307 61366471 61366307 ID=Msa0215820-mRNA-1:cds;Parent=Msa0215820-mRNA-1
chr2_1 three_prime_UTR 61366472 61366576 61366472 ID=Msa0215820-mRNA-1:three_prime_utr;Parent=Msa0215820-mRNA-1
chr2_1 three_prime_UTR 61372327 61372503 61372327 ID=Msa0215820-mRNA-1:three_prime_utr;Parent=Msa0215820-mRNA-1
Gene Sequence

>Msa0215820

TCTCTTTCTTTTTTTTCAAAGAAGGGTCCACATCTCATATCATGTTTTTTACGTGATCAATACGTTGTTATTTGGATAATAGCTTCATCATATAATTATCTTGCAACAAGTGGAGAAGCTCAGAGTATAGAAGCTCAGAGTAAGATAGTTCACATGGCAACAAGTGGCATTTCAGATGGCACAGCAACACAGAACACAGAACCTCAAATGGAGAAGAAATGGTGGAACAAAATCTTGGACATTAAGGAAGCCAAACATCAACTCATGTTTTCACTGCCAATAATTCTTACAACAATATTATACTACTCAATCAATTTGGTTTCTGTCATGCTTGTTGGTCATCTTGGTGAGCTTCAGTTAGCTGGTGCTACTCTTGCTAACTCCTGGTTTGGTGTCACTGCCGTGGGGGTTATGGTTGGTTTAAGTGGTGCATTGGACACACTCTGCGGACAAGGATATGGTGCAAAACAATATCACATGTTGGGAATTTATCTACAAAGCTCTTGCATTATATCTTTTATTTTTTCAATCATTATATCAATTATTTGGTTCTATACAGAACAAATTCTAGTGCTACTTCATCAATCACAAGACATTGCTAGAACAGCTGCACTCTATATGAAGTTTCTTACACCAGGATTATTTGCATTTGGCACCTTGAGAAACATGTTGAGGTTTCTGCTGACACAATCTGTAGTGATGCCACTGGTTATCCTTTCAGCTATCCCAGCAATTGTTCATGTTGGTATTGCATATGGATTTGTTCATTGGTCAGGTCTTAATTTCAAAGGTGGACCAGTTGCAACTTCTATTTCACAATGGTTATCTATGATATTGGTAGGTTTTTATATCTTGTATGCAAAGAAGTTTAAGAATACATGGAGAGGATTTTCAATGCGATCATTTCAGTACTTGTTTACAAATTTGAAACTAGCTCTTCCCTCTGCAGCAATGCTATGTTTGGAGTCTTTGGCCTTTGAAGTCTTGGTTTTCTTAGCTGGATTAATGTCTGACTCACAAATAACAACTTCATTGATTGCAATATGTGCAAACACAGAATTCATTGCTTACTTGATCACTTATGGTCTTAGTGCAGCCGCAAGTAGTCCTACTATCAAACATAAGTTTGCTTCAATATCACCCTTCCTTGCTATTTCCATACTACTTGATTCTGTCCAAGGTGTCTTATCAGGGGTGGTTAGAGCATGTGGTTGGCAGTACGAAGCTGTTTATGTCAACCTTGCAACTTTTTATCTCATTGGTTTACCAATTTCATGTATCCTTGGATTTAAGACCAATTTGCAATATAAGGGTTTATGGATTGGTCTGATTTGTGGGCTGGCATGTCAAACTGTGACACTCTTACTTTTGACAAGATATGCCAAATGGACTAAACTGAATCTCTCAGGAGACAAAGATAAAGATCAACCTGTTGTTGTTTTAACAACTGAATGCATGCCAATTAGGACTGAATAA
Protein sequence

>Msa0215820

SLSFFSKKGPHLISCFLRDQYVVIWIIASSYNYLATSGEAQSIEAQSKIVHMATSGISDGTATQNTEPQMEKKWWNKILDIKEAKHQLMFSLPIILTTILYYSINLVSVMLVGHLGELQLAGATLANSWFGVTAVGVMVGLSGALDTLCGQGYGAKQYHMLGIYLQSSCIISFIFSIIISIIWFYTEQILVLLHQSQDIARTAALYMKFLTPGLFAFGTLRNMLRFLLTQSVVMPLVILSAIPAIVHVGIAYGFVHWSGLNFKGGPVATSISQWLSMILVGFYILYAKKFKNTWRGFSMRSFQYLFTNLKLALPSAAMLCLESLAFEVLVFLAGLMSDSQITTSLIAICANTEFIAYLITYGLSAAASSPTIKHKFASISPFLAISILLDSVQGVLSGVVRACGWQYEAVYVNLATFYLIGLPISCILGFKTNLQYKGLWIGLICGLACQTVTLLLLTRYAKWTKLNLSGDKDKDQPVVVLTTECMPIRTE*