Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0216410 | XP_013464737.1 | 97.219 | 863 | 14 | 4 | 1 | 858 | 1 | 858 | 0.0 | 1723 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0216410 | sp|Q498F0|WDR44_XENLA | 32.364 | 550 | 299 | 19 | 216 | 729 | 345 | 857 | 1.07e-66 | 243 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0216410 | A0A072VAE7 | 97.219 | 863 | 14 | 4 | 1 | 858 | 1 | 858 | 0.0 | 1723 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0216410 | Msa0256600 | 0.900191 | 9.380457e-78 | -8.615850e-47 |
Msa0216410 | Msa0295740 | 0.861515 | 9.717833e-64 | -8.615850e-47 |
Msa0216410 | Msa0334270 | 0.831312 | 1.792651e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0216410 | MtrunA17_Chr2g0317931 | 97.219 | 863 | 14 | 4 | 1 | 858 | 1 | 858 | 0.0 | 1723 |
Msa0216410 | MtrunA17_Chr7g0238321 | 44.150 | 718 | 305 | 14 | 75 | 729 | 85 | 769 | 6.27e-169 | 514 |
Msa0216410 | MtrunA17_Chr8g0388841 | 33.846 | 845 | 411 | 27 | 25 | 858 | 7 | 714 | 1.97e-133 | 415 |
Msa0216410 | MtrunA17_Chr3g0127171 | 42.413 | 547 | 257 | 14 | 331 | 858 | 195 | 702 | 2.09e-129 | 404 |
Msa0216410 | MtrunA17_Chr1g0146771 | 43.462 | 520 | 242 | 16 | 349 | 858 | 232 | 709 | 5.73e-125 | 392 |
Msa0216410 | MtrunA17_Chr8g0384061 | 36.852 | 521 | 238 | 9 | 350 | 858 | 204 | 645 | 1.48e-94 | 310 |
Msa0216410 | MtrunA17_Chr3g0129821 | 37.115 | 520 | 257 | 10 | 350 | 858 | 168 | 628 | 2.27e-91 | 301 |
Msa0216410 | MtrunA17_Chr4g0067151 | 31.390 | 223 | 137 | 9 | 476 | 692 | 65 | 277 | 1.28e-24 | 105 |
Msa0216410 | MtrunA17_Chr1g0185501 | 29.954 | 217 | 130 | 10 | 485 | 692 | 65 | 268 | 9.14e-19 | 88.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0216410 | AT3G15470.1 | 58.361 | 903 | 295 | 19 | 14 | 858 | 4 | 883 | 0.0 | 918 |
Msa0216410 | AT5G54200.1 | 57.780 | 874 | 276 | 16 | 9 | 858 | 21 | 825 | 0.0 | 913 |
Msa0216410 | AT2G37670.2 | 52.037 | 540 | 190 | 11 | 212 | 728 | 249 | 742 | 3.63e-161 | 493 |
Msa0216410 | AT2G37670.1 | 52.037 | 540 | 190 | 11 | 212 | 728 | 248 | 741 | 3.80e-161 | 493 |
Msa0216410 | AT5G02430.1 | 52.290 | 524 | 222 | 8 | 212 | 729 | 258 | 759 | 1.58e-156 | 481 |
Msa0216410 | AT5G53500.2 | 41.828 | 569 | 250 | 15 | 294 | 856 | 159 | 652 | 4.48e-121 | 381 |
Msa0216410 | AT5G53500.1 | 41.828 | 569 | 250 | 15 | 294 | 856 | 159 | 652 | 4.48e-121 | 381 |
Msa0216410 | AT5G24320.1 | 41.423 | 548 | 244 | 14 | 331 | 858 | 204 | 694 | 1.62e-115 | 367 |
Msa0216410 | AT5G24320.2 | 41.123 | 552 | 244 | 15 | 331 | 858 | 204 | 698 | 1.55e-113 | 362 |
Msa0216410 | AT5G42010.1 | 40.000 | 530 | 242 | 14 | 352 | 858 | 233 | 709 | 1.96e-112 | 360 |
Msa0216410 | AT1G64610.2 | 39.804 | 510 | 248 | 13 | 352 | 858 | 194 | 647 | 2.37e-108 | 347 |
Msa0216410 | AT1G64610.1 | 39.804 | 510 | 248 | 13 | 352 | 858 | 194 | 647 | 2.37e-108 | 347 |
Msa0216410 | AT5G42010.2 | 47.447 | 333 | 161 | 8 | 352 | 682 | 233 | 553 | 9.34e-90 | 295 |
Msa0216410 | AT1G48870.2 | 33.333 | 507 | 249 | 9 | 350 | 855 | 172 | 590 | 1.20e-85 | 285 |
Msa0216410 | AT1G48870.3 | 33.333 | 507 | 249 | 9 | 350 | 855 | 172 | 590 | 1.20e-85 | 285 |
Msa0216410 | AT1G48870.1 | 33.333 | 507 | 249 | 9 | 350 | 855 | 172 | 590 | 1.20e-85 | 285 |
Msa0216410 | AT4G02730.1 | 29.224 | 219 | 138 | 10 | 485 | 696 | 81 | 289 | 2.36e-20 | 94.0 |
Msa0216410 | AT3G49660.1 | 28.636 | 220 | 141 | 9 | 480 | 693 | 62 | 271 | 4.15e-20 | 92.8 |
Msa0216410 | AT3G49660.1 | 24.198 | 343 | 206 | 13 | 363 | 692 | 11 | 312 | 6.83e-13 | 71.2 |
Msa0216410 | AT2G16405.1 | 25.820 | 244 | 145 | 10 | 474 | 692 | 199 | 431 | 1.98e-12 | 70.9 |
Find 267 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTTGTTCTTGTGCTTAT+TGG | 0.071791 | 2_1:-62200189 | Msa0216410:three_prime_UTR |
ATTAGAACTTTCCAAAATTT+TGG | 0.114825 | 2_1:-62200373 | Msa0216410:CDS |
AATATGTTATTTCTTGTTAA+TGG | 0.154159 | 2_1:-62204092 | Msa0216410:CDS |
CCGGACACTGGTGAGATTTC+CGG | 0.161118 | 2_1:-62204824 | Msa0216410:CDS |
GTCAGTATGGATTTCATAAA+TGG | 0.177920 | 2_1:-62200457 | Msa0216410:CDS |
AAACCCGTTTGCTCCTTTAA+AGG | 0.187744 | 2_1:-62203930 | Msa0216410:CDS |
GATCTGGTTCATAAGTTTAA+AGG | 0.211448 | 2_1:-62201090 | Msa0216410:intron |
TTTCTTGGTCTTCGTCTTCT+TGG | 0.228579 | 2_1:+62205218 | None:intergenic |
GAAGTGGCAATCCAAAATTT+TGG | 0.230511 | 2_1:+62200362 | None:intergenic |
ATACTTCATTAGTGGATCTT+TGG | 0.232896 | 2_1:-62201698 | Msa0216410:CDS |
GAACGCGATGAAATTGAAAA+AGG | 0.245425 | 2_1:-62204776 | Msa0216410:CDS |
ATCATGCAAATGACCTTTAA+AGG | 0.262544 | 2_1:+62203917 | None:intergenic |
AGTATTAAGTTTAGTTTAGA+TGG | 0.278056 | 2_1:-62204227 | Msa0216410:CDS |
CCCTTAACAGTTACGACATA+TGG | 0.289130 | 2_1:-62205156 | Msa0216410:CDS |
AAGCTCATAATGGATCAATT+TGG | 0.292538 | 2_1:-62204250 | Msa0216410:CDS |
TCAAATCACAAGAAAATTAC+TGG | 0.302245 | 2_1:-62201274 | Msa0216410:CDS |
AGTACTGTTCCCGGTAATTC+TGG | 0.305266 | 2_1:-62204938 | Msa0216410:CDS |
AGAGATTGGAGGGAGGTGTT+GGG | 0.309279 | 2_1:+62205613 | None:intergenic |
TCCTTTGGCGGATAATCTTC+TGG | 0.309791 | 2_1:-62204045 | Msa0216410:CDS |
TTCCGGTGTTGATTTCTTGC+CGG | 0.310114 | 2_1:-62204864 | Msa0216410:CDS |
GGGGAATTCTTCTACTTTGC+CGG | 0.310297 | 2_1:-62204843 | Msa0216410:CDS |
TGGTAATGGAGGTTGTTCTA+AGG | 0.310884 | 2_1:-62204516 | Msa0216410:CDS |
TCTTCTAGAAGAATTCTTTC+CGG | 0.314096 | 2_1:+62204892 | None:intergenic |
CAAGAAAATTACTGGTTTCC+AGG | 0.315246 | 2_1:-62201266 | Msa0216410:intron |
TGGAGGGAGGTGTTGGGGTT+CGG | 0.319661 | 2_1:+62205619 | None:intergenic |
ATATGTTATTTCTTGTTAAT+GGG | 0.320409 | 2_1:-62204091 | Msa0216410:CDS |
AGGGTGAGAGTGAGACAATA+TGG | 0.320663 | 2_1:-62204320 | Msa0216410:CDS |
GAAAGGGGAGTTGTTGCTTA+TGG | 0.321504 | 2_1:-62204138 | Msa0216410:CDS |
CGGATCGACAAGTTGTTGAT+TGG | 0.329763 | 2_1:-62201648 | Msa0216410:CDS |
ACCCGTGACGTTGTCTCCTT+TGG | 0.330639 | 2_1:-62204060 | Msa0216410:CDS |
CGGGGATCCGCCAGAATTAC+CGG | 0.330665 | 2_1:+62204928 | None:intergenic |
GTCAGATTTGGATCGGAATA+TGG | 0.333292 | 2_1:+62205024 | None:intergenic |
GGGGTTGTTGAGATTGAGAT+TGG | 0.333340 | 2_1:+62205398 | None:intergenic |
GGAGACAACGTCACGGGTTC+CGG | 0.336795 | 2_1:+62204065 | None:intergenic |
TGTTGCTATCAAGCTCGGTT+TGG | 0.337909 | 2_1:+62200683 | None:intergenic |
AATGAGAATGGGTTTGTTCA+TGG | 0.340709 | 2_1:+62205369 | None:intergenic |
CCTCTCTTGGTCTAAGTCTC+AGG | 0.354450 | 2_1:-62203886 | Msa0216410:intron |
GAGAGATTGGAGGGAGGTGT+TGG | 0.354608 | 2_1:+62205612 | None:intergenic |
GTTGCTATCAAGCTCGGTTT+GGG | 0.354634 | 2_1:+62200684 | None:intergenic |
ACTCGTCTTCTTCAAACTAT+TGG | 0.355721 | 2_1:-62205100 | Msa0216410:CDS |
ACCGGTGGTGGTGTTGGAAA+TGG | 0.359960 | 2_1:-62204545 | Msa0216410:CDS |
AGCCATTCCCTGGCCTGGTA+TGG | 0.363748 | 2_1:-62200743 | Msa0216410:CDS |
GAGGGTTCACGATCTGCTTC+AGG | 0.366525 | 2_1:-62200601 | Msa0216410:CDS |
AAAGTGAAGGAGGTTGGTAC+TGG | 0.368514 | 2_1:-62204668 | Msa0216410:CDS |
GATGATAGATACTTCATTAG+TGG | 0.371354 | 2_1:-62201706 | Msa0216410:CDS |
TCCGGTGTTGATTTCTTGCC+GGG | 0.372760 | 2_1:-62204863 | Msa0216410:CDS |
ACTATAAGAGATCTTGATAA+TGG | 0.376264 | 2_1:-62204737 | Msa0216410:CDS |
GGTGACACCTTTACTTCTGT+TGG | 0.380370 | 2_1:+62200810 | None:intergenic |
TAGTAGGAAGTCGTTGAGTT+TGG | 0.382361 | 2_1:-62203994 | Msa0216410:CDS |
TCAAAGCCCTCGTGTCAGTA+TGG | 0.385856 | 2_1:-62200470 | Msa0216410:CDS |
TCCATATGTCGTAACTGTTA+AGG | 0.386442 | 2_1:+62205155 | None:intergenic |
ATGGCATTGTAAGGTGGGAT+TGG | 0.388194 | 2_1:+62205043 | None:intergenic |
TATCATCAACAGGATTAAAC+TGG | 0.390022 | 2_1:+62201722 | None:intergenic |
TGTGCTTATTGGATGAAGAT+AGG | 0.390578 | 2_1:-62200178 | Msa0216410:three_prime_UTR |
CGCATAAGCTCCTGCACAAT+CGG | 0.392454 | 2_1:+62204599 | None:intergenic |
TGTGAAGAATGAATGAGTTA+AGG | 0.398605 | 2_1:+62205577 | None:intergenic |
ACTTCTGTTGGGCCTGCAAT+CGG | 0.398774 | 2_1:+62200822 | None:intergenic |
GTGACACCTTTACTTCTGTT+GGG | 0.400336 | 2_1:+62200811 | None:intergenic |
TTCGTCTTCTTGGTCAGAGT+TGG | 0.402171 | 2_1:+62205228 | None:intergenic |
GCCTGGTATGGGTGATGCAT+GGG | 0.403215 | 2_1:-62200731 | Msa0216410:CDS |
GTTGTTGCTTATGGAGAAAC+AGG | 0.403691 | 2_1:-62204129 | Msa0216410:CDS |
AGTACTTCTGATGAACTTCC+TGG | 0.405091 | 2_1:+62201156 | None:intergenic |
GTGAAAGAAGTTAGAGAAGA+TGG | 0.405227 | 2_1:-62204701 | Msa0216410:CDS |
GTTGATGTTGTTGTTGGAGT+TGG | 0.406911 | 2_1:+62205335 | None:intergenic |
GGCCTGGTATGGGTGATGCA+TGG | 0.409184 | 2_1:-62200732 | Msa0216410:CDS |
ACCACGTGAAAGGGCAAAAT+CGG | 0.410979 | 2_1:+62205069 | None:intergenic |
CCATATGTCGTAACTGTTAA+GGG | 0.412326 | 2_1:+62205156 | None:intergenic |
CAAGAGATTCAAGCTCATAA+TGG | 0.414387 | 2_1:-62204260 | Msa0216410:CDS |
GTTGTTATGACCGTCAGATT+TGG | 0.414968 | 2_1:+62205012 | None:intergenic |
GTTGGTGTTGATGTTGTTGT+TGG | 0.416733 | 2_1:+62205329 | None:intergenic |
TTCCGGACGGAGGTTTAGCC+GGG | 0.417860 | 2_1:+62204909 | None:intergenic |
GATTCATGTTTGGCAGGTTG+TGG | 0.418930 | 2_1:-62204171 | Msa0216410:CDS |
GTTTGTGTGTGGCGAGAGAT+TGG | 0.419160 | 2_1:+62205599 | None:intergenic |
AACCACACTAACATTTGCTC+AGG | 0.422037 | 2_1:-62205456 | Msa0216410:five_prime_UTR |
TTTACAGTGAAAATGTTCAT+AGG | 0.422742 | 2_1:+62200777 | None:intergenic |
ATGATGTGCTTGACCTCTCT+TGG | 0.423598 | 2_1:-62203899 | Msa0216410:CDS |
TTGTGGAGTCTGAGAGGAAA+GGG | 0.424221 | 2_1:-62204154 | Msa0216410:CDS |
TCAGTATGGATTTCATAAAT+GGG | 0.429459 | 2_1:-62200456 | Msa0216410:CDS |
ATTCGTAGAAGAAATCTTGT+TGG | 0.429715 | 2_1:+62205299 | None:intergenic |
AATGTAAATAGTACTGTTCC+CGG | 0.431742 | 2_1:-62204947 | Msa0216410:CDS |
AGGATTGTGTGATTCATGTT+TGG | 0.432003 | 2_1:-62204181 | Msa0216410:CDS |
AGTGAGTGCAAACACATGTT+CGG | 0.432044 | 2_1:+62203956 | None:intergenic |
TTTGAGAGAAATTTAAGAGA+GGG | 0.437735 | 2_1:+62205548 | None:intergenic |
AGGATTCCCATGTATACATC+TGG | 0.438205 | 2_1:-62200855 | Msa0216410:CDS |
TACTGGGAGACAGTTGACTA+TGG | 0.438212 | 2_1:-62204651 | Msa0216410:CDS |
TAGTTCAATGGCAGGTCATA+AGG | 0.438789 | 2_1:-62204447 | Msa0216410:CDS |
AGTCAAGATGGGTCATTTCA+TGG | 0.438874 | 2_1:-62204350 | Msa0216410:CDS |
TTGTTATACACCTGATGGTC+AGG | 0.439552 | 2_1:-62201596 | Msa0216410:intron |
GATCGGAATATGGCATTGTA+AGG | 0.442136 | 2_1:+62205034 | None:intergenic |
CTGTGAGGGAGGCTGAAATC+TGG | 0.442676 | 2_1:+62200908 | None:intergenic |
TGTCTCACTCTCACCCTCTC+AGG | 0.442951 | 2_1:+62204326 | None:intergenic |
CTTGAACCAACCTGACCATC+AGG | 0.443778 | 2_1:+62201586 | None:intergenic |
GTTGAGTTTGGACCAGTTTG+TGG | 0.447377 | 2_1:-62203982 | Msa0216410:CDS |
TGGCATTGTAAGGTGGGATT+GGG | 0.449165 | 2_1:+62205044 | None:intergenic |
AGGGGAGGTCGTCCGTTAGT+AGG | 0.450408 | 2_1:-62204010 | Msa0216410:CDS |
GCCATTCCCTGGCCTGGTAT+GGG | 0.450820 | 2_1:-62200742 | Msa0216410:CDS |
CTTCTGGAGAGGAAGAGAAA+GGG | 0.453072 | 2_1:-62204029 | Msa0216410:CDS |
GGTTCGCATATGGAGCATTC+CGG | 0.453183 | 2_1:-62201668 | Msa0216410:CDS |
GTGAGATTTGTAATATTAGC+GGG | 0.453418 | 2_1:-62200223 | Msa0216410:three_prime_UTR |
TCTCGAATACGGGTTGTTGA+TGG | 0.453927 | 2_1:-62201117 | Msa0216410:CDS |
ATGAAGTATCTATCATCAAC+AGG | 0.454580 | 2_1:+62201712 | None:intergenic |
ATCAAGATCTCTTATAGTAC+AGG | 0.454687 | 2_1:+62204742 | None:intergenic |
TGGATGCTAAGGTTCGCATA+TGG | 0.456377 | 2_1:-62201678 | Msa0216410:CDS |
GTCGTTGTTGCTATCAAGCT+CGG | 0.457779 | 2_1:+62200678 | None:intergenic |
TAGTGGATCTTTGGATGCTA+AGG | 0.458377 | 2_1:-62201689 | Msa0216410:CDS |
ATGACCTTTAAAGGAGCAAA+CGG | 0.460221 | 2_1:+62203926 | None:intergenic |
AGAGATACTTCGTCGGAGAA+AGG | 0.460899 | 2_1:-62204404 | Msa0216410:CDS |
GGGTGAGAGTGAGACAATAT+GGG | 0.461483 | 2_1:-62204319 | Msa0216410:CDS |
TCTTCTAGAAGAAGTCATTC+CGG | 0.463152 | 2_1:-62204881 | Msa0216410:CDS |
AGTAGAAGAAGAGATAAAAC+AGG | 0.465592 | 2_1:+62204973 | None:intergenic |
ATAGTCATACACATATTCTA+TGG | 0.465975 | 2_1:+62200327 | None:intergenic |
GCACTTGCTCTCATCTTCAA+TGG | 0.466256 | 2_1:-62202254 | Msa0216410:CDS |
GGTTGTTGATGGTATTGATC+TGG | 0.466728 | 2_1:-62201106 | Msa0216410:CDS |
TGCATCACCCATACCAGGCC+AGG | 0.466953 | 2_1:+62200735 | None:intergenic |
GGTAATGGAGGTTGTTCTAA+GGG | 0.468975 | 2_1:-62204515 | Msa0216410:CDS |
AATCTTGTTGGTCTAGTTGT+TGG | 0.470295 | 2_1:+62205311 | None:intergenic |
GTGAGTGCAAACACATGTTC+GGG | 0.470370 | 2_1:+62203957 | None:intergenic |
CGGTAATTCTGGCGGATCCC+CGG | 0.475497 | 2_1:-62204927 | Msa0216410:CDS |
CATGTTCGGGAACCACAAAC+TGG | 0.476756 | 2_1:+62203970 | None:intergenic |
GTATTAAGTTTAGTTTAGAT+GGG | 0.476966 | 2_1:-62204226 | Msa0216410:CDS |
TTGTGTGATTCATGTTTGGC+AGG | 0.477071 | 2_1:-62204177 | Msa0216410:CDS |
TTTCCGGACGGAGGTTTAGC+CGG | 0.477265 | 2_1:+62204908 | None:intergenic |
AAGAGGAGAGAGAGAGTAAA+CGG | 0.478902 | 2_1:+62205269 | None:intergenic |
TCAGTAGCCATTCCCTGGCC+TGG | 0.479922 | 2_1:-62200748 | Msa0216410:CDS |
TGGTCAATCGCCGATTGTGC+AGG | 0.480378 | 2_1:-62204609 | Msa0216410:CDS |
CCGGTGGTGGTGTTGGAAAT+GGG | 0.480747 | 2_1:-62204544 | Msa0216410:CDS |
CATCTGCTGATTCTCGAATA+CGG | 0.481379 | 2_1:-62201128 | Msa0216410:CDS |
ATATTTACCATTTGCTGTGA+GGG | 0.481702 | 2_1:+62200894 | None:intergenic |
CGTGACGTTGTCTCCTTTGG+CGG | 0.482687 | 2_1:-62204057 | Msa0216410:CDS |
GAGGAGACTGGTGATGTAAC+CGG | 0.482760 | 2_1:-62204563 | Msa0216410:CDS |
TGTCATTTATATAATACATC+TGG | 0.485507 | 2_1:-62201461 | Msa0216410:intron |
TCAGCCTCCCTCACAGCAAA+TGG | 0.486149 | 2_1:-62200901 | Msa0216410:CDS |
ATTGTTACTGCCGGTCTTCG+AGG | 0.487206 | 2_1:-62200400 | Msa0216410:CDS |
TGGACAAAACAGTGCGGCTG+TGG | 0.490355 | 2_1:-62202234 | Msa0216410:CDS |
GTTGAGATTGAGATTGGGAT+TGG | 0.490619 | 2_1:+62205404 | None:intergenic |
GGGTTGTTGAGATTGAGATT+GGG | 0.491004 | 2_1:+62205399 | None:intergenic |
TTGAGATTGAGATTGGGATT+GGG | 0.492778 | 2_1:+62205405 | None:intergenic |
CAATCAACAACTTGTCGATC+CGG | 0.494327 | 2_1:+62201649 | None:intergenic |
CCCATTTCCAACACCACCAC+CGG | 0.495567 | 2_1:+62204544 | None:intergenic |
CCGGAAATCTCACCAGTGTC+CGG | 0.495693 | 2_1:+62204824 | None:intergenic |
ACGAGTACGACGTTCTGAAA+CGG | 0.496617 | 2_1:+62205117 | None:intergenic |
TCTGTGCAGGGTGCACTAGT+TGG | 0.499249 | 2_1:-62201500 | Msa0216410:intron |
TACAGGTGTAGGAGGATGAT+TGG | 0.499821 | 2_1:+62200642 | None:intergenic |
TGGAATAAAGTGAAGGAGGT+TGG | 0.500727 | 2_1:-62204674 | Msa0216410:CDS |
TTCTTGGTCAGAGTTGGAGT+TGG | 0.500980 | 2_1:+62205234 | None:intergenic |
ACACAGAAACATTTGCTCTC+TGG | 0.501437 | 2_1:-62205642 | Msa0216410:five_prime_UTR |
CGGCAGAATCACGAGGAGAC+TGG | 0.501638 | 2_1:-62204575 | Msa0216410:CDS |
CGGAATATGGCATTGTAAGG+TGG | 0.504983 | 2_1:+62205037 | None:intergenic |
TAGAATTTCTGCAACATGGC+CGG | 0.505340 | 2_1:-62200521 | Msa0216410:CDS |
GTCTTCTTGAGAAATGAGAA+TGG | 0.506187 | 2_1:+62205357 | None:intergenic |
GATGTAACCGGTGGTGGTGT+TGG | 0.508669 | 2_1:-62204551 | Msa0216410:CDS |
TCTAGAAACCACAGCTTCAC+CGG | 0.510834 | 2_1:+62204805 | None:intergenic |
TCTTCTGGAGAGGAAGAGAA+AGG | 0.514361 | 2_1:-62204030 | Msa0216410:CDS |
GTTGGAGTTGGAACAAGAGC+AGG | 0.515164 | 2_1:+62205246 | None:intergenic |
GAGGAGGTCGAGCTCGGCTA+CGG | 0.516325 | 2_1:-62204378 | Msa0216410:CDS |
TCTTCTTGAGAAATGAGAAT+GGG | 0.517246 | 2_1:+62205358 | None:intergenic |
CACTAACATTTGCTCAGGGA+AGG | 0.519154 | 2_1:-62205451 | Msa0216410:five_prime_UTR |
CGTCGGAGAAAGGCGGGAGG+AGG | 0.519256 | 2_1:-62204394 | Msa0216410:CDS |
CAAGAGTGTTGCTAGTTCAA+TGG | 0.519515 | 2_1:-62204459 | Msa0216410:CDS |
ATCTGCTGATTCTCGAATAC+GGG | 0.522317 | 2_1:-62201127 | Msa0216410:CDS |
TGCACTAGTTGGTTCATACA+AGG | 0.522538 | 2_1:-62201489 | Msa0216410:CDS |
TGACCTTTAAAGGAGCAAAC+GGG | 0.525285 | 2_1:+62203927 | None:intergenic |
GTTGGAACAAGAGCAGGAAG+AGG | 0.525322 | 2_1:+62205252 | None:intergenic |
GAGATTGGAGGGAGGTGTTG+GGG | 0.525864 | 2_1:+62205614 | None:intergenic |
GGATTGGGTTACCACGTGAA+AGG | 0.527047 | 2_1:+62205059 | None:intergenic |
ATACTTCGTCGGAGAAAGGC+GGG | 0.528933 | 2_1:-62204400 | Msa0216410:CDS |
GGGAAATATCTTGCTAGTGC+TGG | 0.528990 | 2_1:-62204206 | Msa0216410:CDS |
TCTAATCTCACCTCGAAGAC+CGG | 0.530891 | 2_1:+62200390 | None:intergenic |
TCTTCTACTTTGCCGGACAC+TGG | 0.531659 | 2_1:-62204836 | Msa0216410:CDS |
TCCCATGCATCACCCATACC+AGG | 0.535005 | 2_1:+62200730 | None:intergenic |
TGCAGGCCCAACAGAAGTAA+AGG | 0.537014 | 2_1:-62200817 | Msa0216410:CDS |
AGGCGGGAGGAGGTCGAGCT+CGG | 0.539651 | 2_1:-62204384 | Msa0216410:CDS |
GTACTTCTGATGAACTTCCT+GGG | 0.541085 | 2_1:+62201157 | None:intergenic |
GGAATATGGCATTGTAAGGT+GGG | 0.542196 | 2_1:+62205038 | None:intergenic |
GCTACGGATGATAGTCAAGA+TGG | 0.542559 | 2_1:-62204362 | Msa0216410:CDS |
TCCCCGGCTAAACCTCCGTC+CGG | 0.543498 | 2_1:-62204911 | Msa0216410:CDS |
ATTTGAGAGAAATTTAAGAG+AGG | 0.544849 | 2_1:+62205547 | None:intergenic |
TCGATAGAATTTCTGCAACA+TGG | 0.545086 | 2_1:-62200525 | Msa0216410:CDS |
AGATCACCTTCTCCATAAGC+TGG | 0.545843 | 2_1:-62200269 | Msa0216410:three_prime_UTR |
TGTGTGTGGCGAGAGATTGG+AGG | 0.546509 | 2_1:+62205602 | None:intergenic |
CGACGTTCTGAAACGGAAGA+AGG | 0.546555 | 2_1:+62205124 | None:intergenic |
TGTGGAGTCTGAGAGGAAAG+GGG | 0.547241 | 2_1:-62204153 | Msa0216410:CDS |
CAGTCTCCTCGTGATTCTGC+CGG | 0.547333 | 2_1:+62204576 | None:intergenic |
CTCGCAATGGTTGCATGGTG+TGG | 0.549432 | 2_1:+62200568 | None:intergenic |
ACTGGTGATGTAACCGGTGG+TGG | 0.549881 | 2_1:-62204557 | Msa0216410:CDS |
AAGTTAGAGAAGATGGAATG+TGG | 0.550294 | 2_1:-62204694 | Msa0216410:CDS |
GATTGGGTTACCACGTGAAA+GGG | 0.551300 | 2_1:+62205060 | None:intergenic |
GGAAATGGGAGTAATGGTAA+TGG | 0.552792 | 2_1:-62204530 | Msa0216410:CDS |
TATGACCGTCAGATTTGGAT+CGG | 0.552937 | 2_1:+62205017 | None:intergenic |
GAGGAATTTGAGATGACGGT+TGG | 0.552951 | 2_1:-62204629 | Msa0216410:CDS |
ACTGTTTGTCGCACTCGCAA+TGG | 0.554025 | 2_1:+62200555 | None:intergenic |
AAGTGAAGGAGGTTGGTACT+GGG | 0.559730 | 2_1:-62204667 | Msa0216410:CDS |
TCCCTGAGCAAATGTTAGTG+TGG | 0.561014 | 2_1:+62205454 | None:intergenic |
ATTTCTTGTTAATGGGTCGC+CGG | 0.562164 | 2_1:-62204084 | Msa0216410:CDS |
TTGGATCGATCTTCATGAGA+TGG | 0.562964 | 2_1:-62201629 | Msa0216410:CDS |
ACCCATACCAGGCCAGGGAA+TGG | 0.565424 | 2_1:+62200741 | None:intergenic |
ATGTGTCAGTAGCCATTCCC+TGG | 0.566854 | 2_1:-62200753 | Msa0216410:CDS |
TCGCACTCGCAATGGTTGCA+TGG | 0.572307 | 2_1:+62200563 | None:intergenic |
GGTGTTGGAAATGGGAGTAA+TGG | 0.576549 | 2_1:-62204536 | Msa0216410:CDS |
GATACTTCGTCGGAGAAAGG+CGG | 0.578609 | 2_1:-62204401 | Msa0216410:CDS |
AGTGTTGCTAGTTCAATGGC+AGG | 0.581676 | 2_1:-62204455 | Msa0216410:CDS |
TTTACCATTTGCTGTGAGGG+AGG | 0.584191 | 2_1:+62200897 | None:intergenic |
AGAGGAAAACTTCGGTGTCG+AGG | 0.584446 | 2_1:-62200620 | Msa0216410:CDS |
TTCTGGAGAGGAAGAGAAAG+GGG | 0.586118 | 2_1:-62204028 | Msa0216410:CDS |
GGTGAGATTTGTAATATTAG+CGG | 0.587396 | 2_1:-62200224 | Msa0216410:three_prime_UTR |
GGGGATCCGCCAGAATTACC+GGG | 0.588995 | 2_1:+62204929 | None:intergenic |
GCCAAAGGAGACAACGTCAC+GGG | 0.589907 | 2_1:+62204059 | None:intergenic |
ATATATTGTTGCTGCAAGTG+AGG | 0.589984 | 2_1:-62200875 | Msa0216410:CDS |
GAGGAAAACTTCGGTGTCGA+GGG | 0.590606 | 2_1:-62200619 | Msa0216410:CDS |
TCATCCTCCTACACCTGTAG+AGG | 0.591962 | 2_1:-62200638 | Msa0216410:CDS |
CTAGAAGAATTCTTTCCGGA+CGG | 0.592446 | 2_1:+62204896 | None:intergenic |
GAAGAATTCTTTCCGGACGG+AGG | 0.594884 | 2_1:+62204899 | None:intergenic |
ATATCTTGCTAGTGCTGGTG+AGG | 0.595765 | 2_1:-62204201 | Msa0216410:CDS |
GGTATGGTGATTGTTACTGC+CGG | 0.597746 | 2_1:-62200409 | Msa0216410:CDS |
GTGTGTGGCGAGAGATTGGA+GGG | 0.599195 | 2_1:+62205603 | None:intergenic |
AATGGGAGTAATGGTAATGG+AGG | 0.600063 | 2_1:-62204527 | Msa0216410:CDS |
GGCAAAGTAGAAGAATTCCC+CGG | 0.602827 | 2_1:+62204845 | None:intergenic |
TGGCAGGTCATAAGGAGAGG+AGG | 0.604323 | 2_1:-62204439 | Msa0216410:CDS |
ATCCAATAAGCACAAGAACA+AGG | 0.607574 | 2_1:+62200187 | None:intergenic |
ATGGTCTCTTATATTCGAAG+TGG | 0.610791 | 2_1:+62200346 | None:intergenic |
TCCAGAAGATTATCCGCCAA+AGG | 0.612551 | 2_1:+62204044 | None:intergenic |
ACTAACATTTGCTCAGGGAA+GGG | 0.613923 | 2_1:-62205450 | Msa0216410:five_prime_UTR |
GTTGTGGAGTCTGAGAGGAA+AGG | 0.615157 | 2_1:-62204155 | Msa0216410:CDS |
GTCATTTCATGGACCTGAGA+GGG | 0.616808 | 2_1:-62204339 | Msa0216410:CDS |
TATATTTACCATTTGCTGTG+AGG | 0.618354 | 2_1:+62200893 | None:intergenic |
ACCACACTAACATTTGCTCA+GGG | 0.618518 | 2_1:-62205455 | Msa0216410:five_prime_UTR |
TATGGAGGAATTTGAGATGA+CGG | 0.619376 | 2_1:-62204633 | Msa0216410:CDS |
CAATGGCAGGTCATAAGGAG+AGG | 0.619543 | 2_1:-62204442 | Msa0216410:CDS |
GCATCACCCATACCAGGCCA+GGG | 0.621344 | 2_1:+62200736 | None:intergenic |
GCTGCTTGTTATACACCTGA+TGG | 0.625541 | 2_1:-62201601 | Msa0216410:CDS |
GGCAGGTTGTGGAGTCTGAG+AGG | 0.626338 | 2_1:-62204160 | Msa0216410:CDS |
TACTTCTGATGAACTTCCTG+GGG | 0.627143 | 2_1:+62201158 | None:intergenic |
CTACGGATGATAGTCAAGAT+GGG | 0.627312 | 2_1:-62204361 | Msa0216410:CDS |
TGGCGGATAATCTTCTGGAG+AGG | 0.629487 | 2_1:-62204040 | Msa0216410:CDS |
CCTGAGACTTAGACCAAGAG+AGG | 0.630082 | 2_1:+62203886 | None:intergenic |
CCGGTGTTGATTTCTTGCCG+GGG | 0.630342 | 2_1:-62204862 | Msa0216410:CDS |
TTGTGCAGGAGCTTATGCGC+CGG | 0.632452 | 2_1:-62204595 | Msa0216410:CDS |
TGAGATTTGTAATATTAGCG+GGG | 0.634877 | 2_1:-62200222 | Msa0216410:three_prime_UTR |
AGTAACAATCACCATACCCC+AGG | 0.635398 | 2_1:+62200414 | None:intergenic |
TGAGATTTCCGGTGAAGCTG+TGG | 0.636482 | 2_1:-62204813 | Msa0216410:CDS |
TGGAATGTGGAATAAAGTGA+AGG | 0.638048 | 2_1:-62204681 | Msa0216410:CDS |
TGGAGAGGAAGAGAAAGGGG+AGG | 0.640683 | 2_1:-62204025 | Msa0216410:CDS |
CCCCGGCAAGAAATCAACAC+CGG | 0.643592 | 2_1:+62204862 | None:intergenic |
CAGTATGGATTTCATAAATG+GGG | 0.647582 | 2_1:-62200455 | Msa0216410:CDS |
TGATGAGAGAGATACTTCGT+CGG | 0.650321 | 2_1:-62204411 | Msa0216410:CDS |
ATATTCCGATCCAAATCTGA+CGG | 0.651541 | 2_1:-62205022 | Msa0216410:CDS |
ACTCAACGACTTCCTACTAA+CGG | 0.653986 | 2_1:+62203998 | None:intergenic |
CGCCAAAGGAGACAACGTCA+CGG | 0.658328 | 2_1:+62204058 | None:intergenic |
ACTGTTCCCGGTAATTCTGG+CGG | 0.661998 | 2_1:-62204935 | Msa0216410:CDS |
GTAATGGAGGTTGTTCTAAG+GGG | 0.662677 | 2_1:-62204514 | Msa0216410:CDS |
GGTCATTTCATGGACCTGAG+AGG | 0.666445 | 2_1:-62204340 | Msa0216410:CDS |
GTTGCTTATGGAGAAACAGG+AGG | 0.670617 | 2_1:-62204126 | Msa0216410:CDS |
TGGGAGACAGTTGACTATGG+AGG | 0.676143 | 2_1:-62204648 | Msa0216410:CDS |
ACACCTGTAGAGGAAAACTT+CGG | 0.682782 | 2_1:-62200628 | Msa0216410:CDS |
GCACTAGTTGGTTCATACAA+GGG | 0.684365 | 2_1:-62201488 | Msa0216410:CDS |
TCCGGACGGAGGTTTAGCCG+GGG | 0.685261 | 2_1:+62204910 | None:intergenic |
AATGTGGAATAAAGTGAAGG+AGG | 0.688067 | 2_1:-62204678 | Msa0216410:CDS |
ATGTTCATAGGACTGTGTCA+CGG | 0.698331 | 2_1:+62200789 | None:intergenic |
ATGAAATCCATACTGACACG+AGG | 0.701402 | 2_1:+62200463 | None:intergenic |
TGTGGCGAGAGATTGGAGGG+AGG | 0.703464 | 2_1:+62205606 | None:intergenic |
TATGCGCCGGCAGAATCACG+AGG | 0.704308 | 2_1:-62204582 | Msa0216410:CDS |
TGAAATCCATACTGACACGA+GGG | 0.705344 | 2_1:+62200464 | None:intergenic |
CTTCGTCGGAGAAAGGCGGG+AGG | 0.733071 | 2_1:-62204397 | Msa0216410:CDS |
AATGAGTTAAGGTTTGTGTG+TGG | 0.743008 | 2_1:+62205588 | None:intergenic |
CTTCAATGGACAAAACAGTG+CGG | 0.776088 | 2_1:-62202240 | Msa0216410:CDS |
TGTATGACTATATGTCACAG+CGG | 0.780665 | 2_1:-62200315 | Msa0216410:three_prime_UTR |
GAGACTGGTGATGTAACCGG+TGG | 0.783189 | 2_1:-62204560 | Msa0216410:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATAGAAAGAAAAAAAA+AGG | + | chr2_1:62203400-62203419 | None:intergenic | 10.0% |
!!! | AATATGTTATTTCTTGTTAA+TGG | - | chr2_1:62201707-62201726 | Msa0216410:CDS | 15.0% |
!!! | ATATGTTATTTCTTGTTAAT+GGG | - | chr2_1:62201708-62201727 | Msa0216410:CDS | 15.0% |
!!! | TTTATAAACTTCGTTTTTAA+TGG | - | chr2_1:62202483-62202502 | Msa0216410:intron | 15.0% |
!!! | TTATAAACTTCGTTTTTAAT+GGG | - | chr2_1:62202484-62202503 | Msa0216410:intron | 15.0% |
!! | CATTTATAATGAACAATTTA+GGG | - | chr2_1:62202571-62202590 | Msa0216410:intron | 15.0% |
!!! | TAAATACAATTTTAGTTTTG+TGG | + | chr2_1:62202909-62202928 | None:intergenic | 15.0% |
!! | GTTTAACAACAAAAATAATT+TGG | + | chr2_1:62202982-62203001 | None:intergenic | 15.0% |
!!! | ATCTAATTCAATTTTTAGTA+GGG | + | chr2_1:62203798-62203817 | None:intergenic | 15.0% |
!!! | AATCTAATTCAATTTTTAGT+AGG | + | chr2_1:62203799-62203818 | None:intergenic | 15.0% |
!! | TAATTAGCAAAGAAAAAAAA+CGG | + | chr2_1:62204008-62204027 | None:intergenic | 15.0% |
!! | AATACAATTTATCATACAAA+TGG | + | chr2_1:62204797-62204816 | None:intergenic | 15.0% |
!!! | AGTATTAAGTTTAGTTTAGA+TGG | - | chr2_1:62201572-62201591 | Msa0216410:intron | 20.0% |
!!! | GTATTAAGTTTAGTTTAGAT+GGG | - | chr2_1:62201573-62201592 | Msa0216410:intron | 20.0% |
!! | ATTTACTATTCACTCTTATA+TGG | - | chr2_1:62202016-62202035 | Msa0216410:intron | 20.0% |
!!! | TCGGTATTGATTTTATAATT+GGG | - | chr2_1:62202145-62202164 | Msa0216410:intron | 20.0% |
!! | GTACATTTATCTGTTAAAAT+TGG | - | chr2_1:62202235-62202254 | Msa0216410:CDS | 20.0% |
!!! | AAAATGGTTTATTTTTCCAA+CGG | - | chr2_1:62202510-62202529 | Msa0216410:intron | 20.0% |
!! | GCATTTATAATGAACAATTT+AGG | - | chr2_1:62202570-62202589 | Msa0216410:intron | 20.0% |
!! | AAATTAACTTCTGATTAAGT+AGG | - | chr2_1:62202865-62202884 | Msa0216410:intron | 20.0% |
!!! | AATTTTAGTTTTGTGGTAAA+AGG | + | chr2_1:62202902-62202921 | None:intergenic | 20.0% |
!! | GAAACCATATTTAACATAAA+AGG | - | chr2_1:62203069-62203088 | Msa0216410:intron | 20.0% |
!!! | CAAACCTTTTATGTTAAATA+TGG | + | chr2_1:62203076-62203095 | None:intergenic | 20.0% |
!! | CATATTTAACATAAAAGGTT+TGG | - | chr2_1:62203074-62203093 | Msa0216410:intron | 20.0% |
!!! | TGAATTTTGAATAGATTCTT+TGG | - | chr2_1:62203343-62203362 | Msa0216410:intron | 20.0% |
!!! | GAATTTTGAATAGATTCTTT+GGG | - | chr2_1:62203344-62203363 | Msa0216410:intron | 20.0% |
!!! | AAAAACACATAAAAAGTACA+CGG | + | chr2_1:62203753-62203772 | None:intergenic | 20.0% |
!!! | TGTCATTTATATAATACATC+TGG | - | chr2_1:62204338-62204357 | Msa0216410:CDS | 20.0% |
!!! | ATTAGAACTTTCCAAAATTT+TGG | - | chr2_1:62205426-62205445 | Msa0216410:five_prime_UTR | 20.0% |
! | TTTGAGAGAAATTTAAGAGA+GGG | + | chr2_1:62200254-62200273 | None:intergenic | 25.0% |
! | ATTTGAGAGAAATTTAAGAG+AGG | + | chr2_1:62200255-62200274 | None:intergenic | 25.0% |
!!! | TCTGATCAAGTTTTTTAGAA+TGG | + | chr2_1:62200310-62200329 | None:intergenic | 25.0% |
! | ACTATAAGAGATCTTGATAA+TGG | - | chr2_1:62201062-62201081 | Msa0216410:intron | 25.0% |
!!! | CTCGGTATTGATTTTATAAT+TGG | - | chr2_1:62202144-62202163 | Msa0216410:intron | 25.0% |
!!! | GTATTGATTTTATAATTGGG+TGG | - | chr2_1:62202148-62202167 | Msa0216410:intron | 25.0% |
! | TTAGTTATTAGAGTACATAC+TGG | - | chr2_1:62202311-62202330 | Msa0216410:intron | 25.0% |
! | TTATAATGAACAATTTAGGG+AGG | - | chr2_1:62202574-62202593 | Msa0216410:intron | 25.0% |
!! | GTTTGATATTTTCTTTGACA+AGG | - | chr2_1:62202643-62202662 | Msa0216410:intron | 25.0% |
! | ATATGTTGATGTCTTTACAA+TGG | - | chr2_1:62202819-62202838 | Msa0216410:intron | 25.0% |
! | AATCAGTTCAAAACTTTCAA+AGG | + | chr2_1:62203123-62203142 | None:intergenic | 25.0% |
! | CAATAAGGTATGAATCAAAT+AGG | + | chr2_1:62203219-62203238 | None:intergenic | 25.0% |
! | TGATTCATACCTTATTGTTA+TGG | - | chr2_1:62203222-62203241 | Msa0216410:intron | 25.0% |
!!! | CAAATTTTAATAACTACCAG+AGG | + | chr2_1:62203274-62203293 | None:intergenic | 25.0% |
!! | AAAACACATAAAAAGTACAC+GGG | + | chr2_1:62203752-62203771 | None:intergenic | 25.0% |
! | AACTATATCTTGAATCAGAT+TGG | + | chr2_1:62203843-62203862 | None:intergenic | 25.0% |
! | GAGTTCTTTAATATCCTATA+GGG | - | chr2_1:62203938-62203957 | Msa0216410:CDS | 25.0% |
! | TCAAATCACAAGAAAATTAC+TGG | - | chr2_1:62204525-62204544 | Msa0216410:CDS | 25.0% |
! | CAGTAAATCATTAAATTACC+TGG | + | chr2_1:62204554-62204573 | None:intergenic | 25.0% |
! | CAGGTAATTTAATGATTTAC+TGG | - | chr2_1:62204552-62204571 | Msa0216410:CDS | 25.0% |
! | AATCATAAGCATCATAACTT+TGG | + | chr2_1:62204590-62204609 | None:intergenic | 25.0% |
!! | ATTTTTCCAGATGTATACAT+GGG | + | chr2_1:62204953-62204972 | None:intergenic | 25.0% |
! | TTTACAGTGAAAATGTTCAT+AGG | + | chr2_1:62205025-62205044 | None:intergenic | 25.0% |
! | TCAGTATGGATTTCATAAAT+GGG | - | chr2_1:62205343-62205362 | Msa0216410:CDS | 25.0% |
! | ATAGTCATACACATATTCTA+TGG | + | chr2_1:62205475-62205494 | None:intergenic | 25.0% |
TGTGAAGAATGAATGAGTTA+AGG | + | chr2_1:62200225-62200244 | None:intergenic | 30.0% | |
!!! | GATCAAGTTTTTTAGAATGG+AGG | + | chr2_1:62200307-62200326 | None:intergenic | 30.0% |
!!! | AAGGGCATTTTCATTGAAAT+GGG | - | chr2_1:62200367-62200386 | Msa0216410:CDS | 30.0% |
TCTTCTTGAGAAATGAGAAT+GGG | + | chr2_1:62200444-62200463 | None:intergenic | 30.0% | |
ATTCGTAGAAGAAATCTTGT+TGG | + | chr2_1:62200503-62200522 | None:intergenic | 30.0% | |
!!! | TGTTGTTGTTGTTGTTTTCT+TGG | + | chr2_1:62200599-62200618 | None:intergenic | 30.0% |
AGTAGAAGAAGAGATAAAAC+AGG | + | chr2_1:62200829-62200848 | None:intergenic | 30.0% | |
AATGTAAATAGTACTGTTCC+CGG | - | chr2_1:62200852-62200871 | Msa0216410:CDS | 30.0% | |
! | TCTTCTAGAAGAATTCTTTC+CGG | + | chr2_1:62200910-62200929 | None:intergenic | 30.0% |
AACGCGATGAAATTGAAAAA+GGG | - | chr2_1:62201024-62201043 | Msa0216410:intron | 30.0% | |
ATCAAGATCTCTTATAGTAC+AGG | + | chr2_1:62201060-62201079 | None:intergenic | 30.0% | |
!! | AAGCTCATAATGGATCAATT+TGG | - | chr2_1:62201549-62201568 | Msa0216410:intron | 30.0% |
ATCATGCAAATGACCTTTAA+AGG | + | chr2_1:62201885-62201904 | None:intergenic | 30.0% | |
!!! | TTAGCTTCTGTTTTTTGGAT+AGG | - | chr2_1:62201936-62201955 | Msa0216410:intron | 30.0% |
!! | TTGGATAGGTCTTTTTGTTT+TGG | - | chr2_1:62201950-62201969 | Msa0216410:intron | 30.0% |
TGTGCTTATATCACAAAACT+CGG | - | chr2_1:62202126-62202145 | Msa0216410:intron | 30.0% | |
ATGTACACTTATATGCAACT+TGG | + | chr2_1:62202221-62202240 | None:intergenic | 30.0% | |
AAATGTACTCTTATGCAACT+TGG | + | chr2_1:62202263-62202282 | None:intergenic | 30.0% | |
AGTCTTAAAAACATGTACTG+TGG | - | chr2_1:62202378-62202397 | Msa0216410:intron | 30.0% | |
GTCTTAAAAACATGTACTGT+GGG | - | chr2_1:62202379-62202398 | Msa0216410:intron | 30.0% | |
AAATTTGAGTCTGATTGAGT+AGG | + | chr2_1:62202460-62202479 | None:intergenic | 30.0% | |
!! | CGTTTTTAATGGGTCTAAAA+TGG | - | chr2_1:62202494-62202513 | Msa0216410:intron | 30.0% |
! | TTTTCTTTGACAAGGAAACA+TGG | - | chr2_1:62202651-62202670 | Msa0216410:intron | 30.0% |
AAGATGTCTGTTGAATAAAG+CGG | - | chr2_1:62202733-62202752 | Msa0216410:intron | 30.0% | |
AATAAAGCGGTAACTTACTT+AGG | - | chr2_1:62202746-62202765 | Msa0216410:intron | 30.0% | |
TAGGATGGTTATTTGTAACT+TGG | - | chr2_1:62202765-62202784 | Msa0216410:intron | 30.0% | |
AGGATGGTTATTTGTAACTT+GGG | - | chr2_1:62202766-62202785 | Msa0216410:intron | 30.0% | |
!!! | TTAGTTTTGTGGTAAAAGGA+TGG | + | chr2_1:62202898-62202917 | None:intergenic | 30.0% |
AGAGGATGTTTATGTAAACT+AGG | - | chr2_1:62203182-62203201 | Msa0216410:intron | 30.0% | |
TGCGAAGTATAAACATTACA+AGG | + | chr2_1:62203516-62203535 | None:intergenic | 30.0% | |
!!! | ATTTTTTCACACAGTGACTA+TGG | - | chr2_1:62203615-62203634 | Msa0216410:intron | 30.0% |
TATATACATGCACATTAGAG+TGG | + | chr2_1:62203719-62203738 | None:intergenic | 30.0% | |
ATCTTGAATCAGATTGGATA+GGG | + | chr2_1:62203837-62203856 | None:intergenic | 30.0% | |
TATCTTGAATCAGATTGGAT+AGG | + | chr2_1:62203838-62203857 | None:intergenic | 30.0% | |
TATTTGTCTTCACTGCATAT+AGG | - | chr2_1:62203902-62203921 | Msa0216410:CDS | 30.0% | |
GGAGTTCTTTAATATCCTAT+AGG | - | chr2_1:62203937-62203956 | Msa0216410:CDS | 30.0% | |
TTCTTTAATATCCTATAGGG+TGG | - | chr2_1:62203941-62203960 | Msa0216410:CDS | 30.0% | |
TAGCAAAGAAAAAAAACGGA+GGG | + | chr2_1:62204004-62204023 | None:intergenic | 30.0% | |
TTAGCAAAGAAAAAAAACGG+AGG | + | chr2_1:62204005-62204024 | None:intergenic | 30.0% | |
AAGCAGATAGAAACGAAAAA+AGG | + | chr2_1:62204033-62204052 | None:intergenic | 30.0% | |
TATCATCAACAGGATTAAAC+TGG | + | chr2_1:62204080-62204099 | None:intergenic | 30.0% | |
! | ATGAAGTATCTATCATCAAC+AGG | + | chr2_1:62204090-62204109 | None:intergenic | 30.0% |
GATGATAGATACTTCATTAG+TGG | - | chr2_1:62204093-62204112 | Msa0216410:CDS | 30.0% | |
! | ATACTTCATTAGTGGATCTT+TGG | - | chr2_1:62204101-62204120 | Msa0216410:CDS | 30.0% |
!! | TGAATTTCTGAAGTCTGAAA+TGG | + | chr2_1:62204251-62204270 | None:intergenic | 30.0% |
TTAGTTAAATTGTCTGTGCA+GGG | - | chr2_1:62204287-62204306 | Msa0216410:CDS | 30.0% | |
ATACTCTATTCTGACAATTG+TGG | - | chr2_1:62204413-62204432 | Msa0216410:CDS | 30.0% | |
AAAAACAAGATGTTAACCAG+TGG | + | chr2_1:62204439-62204458 | None:intergenic | 30.0% | |
! | GATCTGGTTCATAAGTTTAA+AGG | - | chr2_1:62204709-62204728 | Msa0216410:CDS | 30.0% |
!! | ATATTTACCATTTGCTGTGA+GGG | + | chr2_1:62204908-62204927 | None:intergenic | 30.0% |
!! | TATATTTACCATTTGCTGTG+AGG | + | chr2_1:62204909-62204928 | None:intergenic | 30.0% |
! | CATTTTTCCAGATGTATACA+TGG | + | chr2_1:62204954-62204973 | None:intergenic | 30.0% |
GTCAGTATGGATTTCATAAA+TGG | - | chr2_1:62205342-62205361 | Msa0216410:CDS | 30.0% | |
CAGTATGGATTTCATAAATG+GGG | - | chr2_1:62205344-62205363 | Msa0216410:CDS | 30.0% | |
AAAAACCTGTACAGAAAAGT+GGG | - | chr2_1:62205554-62205573 | Msa0216410:five_prime_UTR | 30.0% | |
GGTGAGATTTGTAATATTAG+CGG | - | chr2_1:62205575-62205594 | Msa0216410:five_prime_UTR | 30.0% | |
GTGAGATTTGTAATATTAGC+GGG | - | chr2_1:62205576-62205595 | Msa0216410:five_prime_UTR | 30.0% | |
TGAGATTTGTAATATTAGCG+GGG | - | chr2_1:62205577-62205596 | Msa0216410:five_prime_UTR | 30.0% | |
AATGAGTTAAGGTTTGTGTG+TGG | + | chr2_1:62200214-62200233 | None:intergenic | 35.0% | |
!!! | AGGATTTTGAGATCCAATTG+GGG | + | chr2_1:62200287-62200306 | None:intergenic | 35.0% |
!!! | GAGGATTTTGAGATCCAATT+GGG | + | chr2_1:62200288-62200307 | None:intergenic | 35.0% |
!!! | GAAGGGCATTTTCATTGAAA+TGG | - | chr2_1:62200366-62200385 | Msa0216410:CDS | 35.0% |
TTGAGATTGAGATTGGGATT+GGG | + | chr2_1:62200397-62200416 | None:intergenic | 35.0% | |
!!! | GGTTTGTTCATGGTTTTAAG+GGG | + | chr2_1:62200423-62200442 | None:intergenic | 35.0% |
!!! | GGGTTTGTTCATGGTTTTAA+GGG | + | chr2_1:62200424-62200443 | None:intergenic | 35.0% |
!! | TGGGTTTGTTCATGGTTTTA+AGG | + | chr2_1:62200425-62200444 | None:intergenic | 35.0% |
! | AATGAGAATGGGTTTGTTCA+TGG | + | chr2_1:62200433-62200452 | None:intergenic | 35.0% |
GTCTTCTTGAGAAATGAGAA+TGG | + | chr2_1:62200445-62200464 | None:intergenic | 35.0% | |
! | AATCTTGTTGGTCTAGTTGT+TGG | + | chr2_1:62200491-62200510 | None:intergenic | 35.0% |
CCATATGTCGTAACTGTTAA+GGG | + | chr2_1:62200646-62200665 | None:intergenic | 35.0% | |
TCCATATGTCGTAACTGTTA+AGG | + | chr2_1:62200647-62200666 | None:intergenic | 35.0% | |
ACTCGTCTTCTTCAAACTAT+TGG | - | chr2_1:62200699-62200718 | Msa0216410:CDS | 35.0% | |
ATATTCCGATCCAAATCTGA+CGG | - | chr2_1:62200777-62200796 | Msa0216410:CDS | 35.0% | |
! | TCTTCTAGAAGAAGTCATTC+CGG | - | chr2_1:62200918-62200937 | Msa0216410:CDS | 35.0% |
GAACGCGATGAAATTGAAAA+AGG | - | chr2_1:62201023-62201042 | Msa0216410:intron | 35.0% | |
ACGCGATGAAATTGAAAAAG+GGG | - | chr2_1:62201025-62201044 | Msa0216410:intron | 35.0% | |
GTGAAAGAAGTTAGAGAAGA+TGG | - | chr2_1:62201098-62201117 | Msa0216410:CDS | 35.0% | |
AAGTTAGAGAAGATGGAATG+TGG | - | chr2_1:62201105-62201124 | Msa0216410:CDS | 35.0% | |
TGGAATGTGGAATAAAGTGA+AGG | - | chr2_1:62201118-62201137 | Msa0216410:CDS | 35.0% | |
AATGTGGAATAAAGTGAAGG+AGG | - | chr2_1:62201121-62201140 | Msa0216410:CDS | 35.0% | |
! | TATGGAGGAATTTGAGATGA+CGG | - | chr2_1:62201166-62201185 | Msa0216410:intron | 35.0% |
!! | TGTTCTAAGGGGAAAAAGAA+AGG | - | chr2_1:62201296-62201315 | Msa0216410:CDS | 35.0% |
CAAGAGATTCAAGCTCATAA+TGG | - | chr2_1:62201539-62201558 | Msa0216410:intron | 35.0% | |
AGGATTGTGTGATTCATGTT+TGG | - | chr2_1:62201618-62201637 | Msa0216410:CDS | 35.0% | |
! | ATGACCTTTAAAGGAGCAAA+CGG | + | chr2_1:62201876-62201895 | None:intergenic | 35.0% |
!!! | TCAGGTTAGCTTCTGTTTTT+TGG | - | chr2_1:62201931-62201950 | Msa0216410:intron | 35.0% |
!!! | CATCGTTGGCTTTTGTTAAA+AGG | - | chr2_1:62202039-62202058 | Msa0216410:intron | 35.0% |
AAGCCAATTCATCAGTTCAT+CGG | + | chr2_1:62202079-62202098 | None:intergenic | 35.0% | |
!! | AGTTTTAGTGACTCTCCTTT+CGG | - | chr2_1:62202343-62202362 | Msa0216410:intron | 35.0% |
TGTCACAGTGAAAAGATTTC+TGG | - | chr2_1:62202418-62202437 | Msa0216410:intron | 35.0% | |
GGATGGTTATTTGTAACTTG+GGG | - | chr2_1:62202767-62202786 | Msa0216410:intron | 35.0% | |
! | TCAAACACATTTGTTGAGCT+GGG | + | chr2_1:62202936-62202955 | None:intergenic | 35.0% |
! | TTCAAACACATTTGTTGAGC+TGG | + | chr2_1:62202937-62202956 | None:intergenic | 35.0% |
TCGTAACATTGAATGTGAAG+TGG | + | chr2_1:62203004-62203023 | None:intergenic | 35.0% | |
AGGTTTGGATCCTATTAAAG+AGG | - | chr2_1:62203089-62203108 | Msa0216410:intron | 35.0% | |
GGTTTGGATCCTATTAAAGA+GGG | - | chr2_1:62203090-62203109 | Msa0216410:intron | 35.0% | |
GTTTGGATCCTATTAAAGAG+GGG | - | chr2_1:62203091-62203110 | Msa0216410:intron | 35.0% | |
!!! | GGTTTTTTCCCCTCTTTAAT+AGG | + | chr2_1:62203102-62203121 | None:intergenic | 35.0% |
TCTCCAATGTATACTAAAGG+GGG | + | chr2_1:62203165-62203184 | None:intergenic | 35.0% | |
CTCTCCAATGTATACTAAAG+GGG | + | chr2_1:62203166-62203185 | None:intergenic | 35.0% | |
CCTCTCCAATGTATACTAAA+GGG | + | chr2_1:62203167-62203186 | None:intergenic | 35.0% | |
TCCTCTCCAATGTATACTAA+AGG | + | chr2_1:62203168-62203187 | None:intergenic | 35.0% | |
CCTTATTGTTATGGTAACAC+CGG | - | chr2_1:62203231-62203250 | Msa0216410:intron | 35.0% | |
TTTGAATAGATTCTTTGGGC+AGG | - | chr2_1:62203348-62203367 | Msa0216410:intron | 35.0% | |
TTGAATAGATTCTTTGGGCA+GGG | - | chr2_1:62203349-62203368 | Msa0216410:intron | 35.0% | |
TACAAGGATGATCTAAACAC+TGG | + | chr2_1:62203500-62203519 | None:intergenic | 35.0% | |
GCATATAGGACAAGTTATAC+AGG | - | chr2_1:62203916-62203935 | Msa0216410:CDS | 35.0% | |
CCTAAATTTAACCACCCTAT+AGG | + | chr2_1:62203955-62203974 | None:intergenic | 35.0% | |
CCTATAGGGTGGTTAAATTT+AGG | - | chr2_1:62203952-62203971 | Msa0216410:CDS | 35.0% | |
CTTAGTTAAATTGTCTGTGC+AGG | - | chr2_1:62204286-62204305 | Msa0216410:CDS | 35.0% | |
!! | CAAGAAAATTACTGGTTTCC+AGG | - | chr2_1:62204533-62204552 | Msa0216410:CDS | 35.0% |
AACTGATGTAAGTTTCTTGC+AGG | - | chr2_1:62204850-62204869 | Msa0216410:CDS | 35.0% | |
ATATATTGTTGCTGCAAGTG+AGG | - | chr2_1:62204924-62204943 | Msa0216410:CDS | 35.0% | |
! | GACATGCATGATACATTTTC+TGG | - | chr2_1:62205090-62205109 | Msa0216410:CDS | 35.0% |
TCGATAGAATTTCTGCAACA+TGG | - | chr2_1:62205274-62205293 | Msa0216410:CDS | 35.0% | |
! | GCTAGAAGAAGTTTTTCTTC+CGG | + | chr2_1:62205300-62205319 | None:intergenic | 35.0% |
TAAGTCAAAAAATGTCAGCC+TGG | - | chr2_1:62205367-62205386 | Msa0216410:CDS | 35.0% | |
AAGTCAAAAAATGTCAGCCT+GGG | - | chr2_1:62205368-62205387 | Msa0216410:CDS | 35.0% | |
! | GAAGTGGCAATCCAAAATTT+TGG | + | chr2_1:62205440-62205459 | None:intergenic | 35.0% |
ATGGTCTCTTATATTCGAAG+TGG | + | chr2_1:62205456-62205475 | None:intergenic | 35.0% | |
TGTATGACTATATGTCACAG+CGG | - | chr2_1:62205484-62205503 | Msa0216410:five_prime_UTR | 35.0% | |
CAAAAACCTGTACAGAAAAG+TGG | - | chr2_1:62205553-62205572 | Msa0216410:five_prime_UTR | 35.0% | |
TTCCTTGTTCTTGTGCTTAT+TGG | - | chr2_1:62205610-62205629 | Msa0216410:five_prime_UTR | 35.0% | |
ATCCAATAAGCACAAGAACA+AGG | + | chr2_1:62205615-62205634 | None:intergenic | 35.0% | |
TGTGCTTATTGGATGAAGAT+AGG | - | chr2_1:62205621-62205640 | Msa0216410:five_prime_UTR | 35.0% | |
AAATTTCACACTCCCCCAAT+TGG | - | chr2_1:62200271-62200290 | Msa0216410:three_prime_UTR | 40.0% | |
!!! | GGATTTTGAGATCCAATTGG+GGG | + | chr2_1:62200286-62200305 | None:intergenic | 40.0% |
!!! | GGAGGATTTTGAGATCCAAT+TGG | + | chr2_1:62200289-62200308 | None:intergenic | 40.0% |
AACCACACTAACATTTGCTC+AGG | - | chr2_1:62200343-62200362 | Msa0216410:exon | 40.0% | |
ACCACACTAACATTTGCTCA+GGG | - | chr2_1:62200344-62200363 | Msa0216410:exon | 40.0% | |
ACTAACATTTGCTCAGGGAA+GGG | - | chr2_1:62200349-62200368 | Msa0216410:exon | 40.0% | |
GTTGAGATTGAGATTGGGAT+TGG | + | chr2_1:62200398-62200417 | None:intergenic | 40.0% | |
GGGTTGTTGAGATTGAGATT+GGG | + | chr2_1:62200403-62200422 | None:intergenic | 40.0% | |
! | GTTGATGTTGTTGTTGGAGT+TGG | + | chr2_1:62200467-62200486 | None:intergenic | 40.0% |
!! | GTTGGTGTTGATGTTGTTGT+TGG | + | chr2_1:62200473-62200492 | None:intergenic | 40.0% |
AAGAGGAGAGAGAGAGTAAA+CGG | + | chr2_1:62200533-62200552 | None:intergenic | 40.0% | |
! | TTTCTTGGTCTTCGTCTTCT+TGG | + | chr2_1:62200584-62200603 | None:intergenic | 40.0% |
CCCTTAACAGTTACGACATA+TGG | - | chr2_1:62200643-62200662 | Msa0216410:CDS | 40.0% | |
GGAATATGGCATTGTAAGGT+GGG | + | chr2_1:62200764-62200783 | None:intergenic | 40.0% | |
GATCGGAATATGGCATTGTA+AGG | + | chr2_1:62200768-62200787 | None:intergenic | 40.0% | |
GTCAGATTTGGATCGGAATA+TGG | + | chr2_1:62200778-62200797 | None:intergenic | 40.0% | |
TATGACCGTCAGATTTGGAT+CGG | + | chr2_1:62200785-62200804 | None:intergenic | 40.0% | |
GTTGTTATGACCGTCAGATT+TGG | + | chr2_1:62200790-62200809 | None:intergenic | 40.0% | |
CTAGAAGAATTCTTTCCGGA+CGG | + | chr2_1:62200906-62200925 | None:intergenic | 40.0% | |
TGGAATAAAGTGAAGGAGGT+TGG | - | chr2_1:62201125-62201144 | Msa0216410:CDS | 40.0% | |
GGAAATGGGAGTAATGGTAA+TGG | - | chr2_1:62201269-62201288 | Msa0216410:CDS | 40.0% | |
!! | AATGGGAGTAATGGTAATGG+AGG | - | chr2_1:62201272-62201291 | Msa0216410:CDS | 40.0% |
!! | TGGTAATGGAGGTTGTTCTA+AGG | - | chr2_1:62201283-62201302 | Msa0216410:CDS | 40.0% |
!! | GGTAATGGAGGTTGTTCTAA+GGG | - | chr2_1:62201284-62201303 | Msa0216410:CDS | 40.0% |
! | GTAATGGAGGTTGTTCTAAG+GGG | - | chr2_1:62201285-62201304 | Msa0216410:CDS | 40.0% |
TCTAAGGGGAAAAAGAAAGG+AGG | - | chr2_1:62201299-62201318 | Msa0216410:CDS | 40.0% | |
CTAAGGGGAAAAAGAAAGGA+GGG | - | chr2_1:62201300-62201319 | Msa0216410:CDS | 40.0% | |
!! | CAAGAGTGTTGCTAGTTCAA+TGG | - | chr2_1:62201340-62201359 | Msa0216410:intron | 40.0% |
TAGTTCAATGGCAGGTCATA+AGG | - | chr2_1:62201352-62201371 | Msa0216410:intron | 40.0% | |
TGATGAGAGAGATACTTCGT+CGG | - | chr2_1:62201388-62201407 | Msa0216410:intron | 40.0% | |
CTACGGATGATAGTCAAGAT+GGG | - | chr2_1:62201438-62201457 | Msa0216410:intron | 40.0% | |
AGTCAAGATGGGTCATTTCA+TGG | - | chr2_1:62201449-62201468 | Msa0216410:intron | 40.0% | |
TTGTGTGATTCATGTTTGGC+AGG | - | chr2_1:62201622-62201641 | Msa0216410:CDS | 40.0% | |
! | GTTGTTGCTTATGGAGAAAC+AGG | - | chr2_1:62201670-62201689 | Msa0216410:CDS | 40.0% |
! | ATTTCTTGTTAATGGGTCGC+CGG | - | chr2_1:62201715-62201734 | Msa0216410:CDS | 40.0% |
ACTCAACGACTTCCTACTAA+CGG | + | chr2_1:62201804-62201823 | None:intergenic | 40.0% | |
TAGTAGGAAGTCGTTGAGTT+TGG | - | chr2_1:62201805-62201824 | Msa0216410:intron | 40.0% | |
AGTGAGTGCAAACACATGTT+CGG | + | chr2_1:62201846-62201865 | None:intergenic | 40.0% | |
AAACCCGTTTGCTCCTTTAA+AGG | - | chr2_1:62201869-62201888 | Msa0216410:intron | 40.0% | |
! | TGACCTTTAAAGGAGCAAAC+GGG | + | chr2_1:62201875-62201894 | None:intergenic | 40.0% |
TCACTCTTATATGGCATCGT+TGG | - | chr2_1:62202025-62202044 | Msa0216410:intron | 40.0% | |
TGACCGATGAACTGATGAAT+TGG | - | chr2_1:62202073-62202092 | Msa0216410:intron | 40.0% | |
!! | TGGGTGGAATTGTTTTCAAG+TGG | - | chr2_1:62202164-62202183 | Msa0216410:intron | 40.0% |
!!! | TTGTTTTCAAGTGGCTGAAC+AGG | - | chr2_1:62202173-62202192 | Msa0216410:intron | 40.0% |
ACTGCAATAATGCAACCGAA+AGG | + | chr2_1:62202361-62202380 | None:intergenic | 40.0% | |
TTGTGATTCTAGGCCTTTCT+TGG | - | chr2_1:62202540-62202559 | Msa0216410:intron | 40.0% | |
AAATGCCGTCTTTCCAAGAA+AGG | + | chr2_1:62202556-62202575 | None:intergenic | 40.0% | |
TGCTATAGTGAACTGTGATG+TGG | - | chr2_1:62202703-62202722 | Msa0216410:intron | 40.0% | |
AAGCGGTAACTTACTTAGGA+TGG | - | chr2_1:62202750-62202769 | Msa0216410:intron | 40.0% | |
TGGTTATTTGTAACTTGGGG+TGG | - | chr2_1:62202770-62202789 | Msa0216410:intron | 40.0% | |
GGTTATTTGTAACTTGGGGT+GGG | - | chr2_1:62202771-62202790 | Msa0216410:intron | 40.0% | |
GTTATTTGTAACTTGGGGTG+GGG | - | chr2_1:62202772-62202791 | Msa0216410:intron | 40.0% | |
! | CAAACACATTTGTTGAGCTG+GGG | + | chr2_1:62202935-62202954 | None:intergenic | 40.0% |
GTATACTAAAGGGGGAAGTT+TGG | + | chr2_1:62203157-62203176 | None:intergenic | 40.0% | |
CTTCCCCCTTTAGTATACAT+TGG | - | chr2_1:62203159-62203178 | Msa0216410:intron | 40.0% | |
CCCTTTAGTATACATTGGAG+AGG | - | chr2_1:62203164-62203183 | Msa0216410:intron | 40.0% | |
!! | CCGGTGTTACCATAACAATA+AGG | + | chr2_1:62203234-62203253 | None:intergenic | 40.0% |
TATTGTTATGGTAACACCGG+TGG | - | chr2_1:62203234-62203253 | Msa0216410:intron | 40.0% | |
ATTGTTATGGTAACACCGGT+GGG | - | chr2_1:62203235-62203254 | Msa0216410:intron | 40.0% | |
TGAATAGATTCTTTGGGCAG+GGG | - | chr2_1:62203350-62203369 | Msa0216410:intron | 40.0% | |
CTTCAATGGACAAAACAGTG+CGG | - | chr2_1:62203559-62203578 | Msa0216410:intron | 40.0% | |
ATGACTGCAACTCAGGTTTA+GGG | + | chr2_1:62203691-62203710 | None:intergenic | 40.0% | |
GAATCAGATTGGATAGGGAT+AGG | + | chr2_1:62203832-62203851 | None:intergenic | 40.0% | |
! | TTTGAGACCAATTATGCGCA+AGG | - | chr2_1:62203863-62203882 | Msa0216410:intron | 40.0% |
AATTGTGCCTTGCGCATAAT+TGG | + | chr2_1:62203873-62203892 | None:intergenic | 40.0% | |
AAAAAAAACGGAGGGAACGA+GGG | + | chr2_1:62203996-62204015 | None:intergenic | 40.0% | |
GTTTCTATCTGCTTTCTGTC+TGG | - | chr2_1:62204039-62204058 | Msa0216410:CDS | 40.0% | |
! | TAGTGGATCTTTGGATGCTA+AGG | - | chr2_1:62204110-62204129 | Msa0216410:CDS | 40.0% |
CAATCAACAACTTGTCGATC+CGG | + | chr2_1:62204153-62204172 | None:intergenic | 40.0% | |
TTGGATCGATCTTCATGAGA+TGG | - | chr2_1:62204170-62204189 | Msa0216410:CDS | 40.0% | |
TTGTTATACACCTGATGGTC+AGG | - | chr2_1:62204203-62204222 | Msa0216410:CDS | 40.0% | |
! | TGCACTAGTTGGTTCATACA+AGG | - | chr2_1:62204310-62204329 | Msa0216410:CDS | 40.0% |
! | GCACTAGTTGGTTCATACAA+GGG | - | chr2_1:62204311-62204330 | Msa0216410:CDS | 40.0% |
AATACATCTGGTACTGTCAG+AGG | - | chr2_1:62204350-62204369 | Msa0216410:CDS | 40.0% | |
! | TTTTATGAACAGTTTGCCCC+AGG | - | chr2_1:62204625-62204644 | Msa0216410:CDS | 40.0% |
TACTTCTGATGAACTTCCTG+GGG | + | chr2_1:62204644-62204663 | None:intergenic | 40.0% | |
GTACTTCTGATGAACTTCCT+GGG | + | chr2_1:62204645-62204664 | None:intergenic | 40.0% | |
AGTACTTCTGATGAACTTCC+TGG | + | chr2_1:62204646-62204665 | None:intergenic | 40.0% | |
!! | CATCTGCTGATTCTCGAATA+CGG | - | chr2_1:62204671-62204690 | Msa0216410:CDS | 40.0% |
!! | ATCTGCTGATTCTCGAATAC+GGG | - | chr2_1:62204672-62204691 | Msa0216410:CDS | 40.0% |
!! | GGTTGTTGATGGTATTGATC+TGG | - | chr2_1:62204693-62204712 | Msa0216410:CDS | 40.0% |
TCAGTTTGATCAGCACGAAT+TGG | + | chr2_1:62204836-62204855 | None:intergenic | 40.0% | |
AGGATTCCCATGTATACATC+TGG | - | chr2_1:62204944-62204963 | Msa0216410:CDS | 40.0% | |
GTGACACCTTTACTTCTGTT+GGG | + | chr2_1:62204991-62205010 | None:intergenic | 40.0% | |
ATGTTCATAGGACTGTGTCA+CGG | + | chr2_1:62205013-62205032 | None:intergenic | 40.0% | |
! | AAGTTTTCCTCTACAGGTGT+AGG | + | chr2_1:62205171-62205190 | None:intergenic | 40.0% |
ACACCTGTAGAGGAAAACTT+CGG | - | chr2_1:62205171-62205190 | Msa0216410:CDS | 40.0% | |
TAGAATTTCTGCAACATGGC+CGG | - | chr2_1:62205278-62205297 | Msa0216410:CDS | 40.0% | |
TGAAATCCATACTGACACGA+GGG | + | chr2_1:62205338-62205357 | None:intergenic | 40.0% | |
ATGAAATCCATACTGACACG+AGG | + | chr2_1:62205339-62205358 | None:intergenic | 40.0% | |
AGTCAAAAAATGTCAGCCTG+GGG | - | chr2_1:62205369-62205388 | Msa0216410:CDS | 40.0% | |
! | TTTTTGCCAGCTTATGGAGA+AGG | + | chr2_1:62205539-62205558 | None:intergenic | 40.0% |
! | TACAGGTTTTTGCCAGCTTA+TGG | + | chr2_1:62205545-62205564 | None:intergenic | 40.0% |
TCCCTGAGCAAATGTTAGTG+TGG | + | chr2_1:62200348-62200367 | None:intergenic | 45.0% | |
CACTAACATTTGCTCAGGGA+AGG | - | chr2_1:62200348-62200367 | Msa0216410:exon | 45.0% | |
GGGGTTGTTGAGATTGAGAT+TGG | + | chr2_1:62200404-62200423 | None:intergenic | 45.0% | |
TTCTTGGTCAGAGTTGGAGT+TGG | + | chr2_1:62200568-62200587 | None:intergenic | 45.0% | |
TTCGTCTTCTTGGTCAGAGT+TGG | + | chr2_1:62200574-62200593 | None:intergenic | 45.0% | |
!! | ACGAGTACGACGTTCTGAAA+CGG | + | chr2_1:62200685-62200704 | None:intergenic | 45.0% |
ACCACGTGAAAGGGCAAAAT+CGG | + | chr2_1:62200733-62200752 | None:intergenic | 45.0% | |
GATTGGGTTACCACGTGAAA+GGG | + | chr2_1:62200742-62200761 | None:intergenic | 45.0% | |
TGGCATTGTAAGGTGGGATT+GGG | + | chr2_1:62200758-62200777 | None:intergenic | 45.0% | |
ATGGCATTGTAAGGTGGGAT+TGG | + | chr2_1:62200759-62200778 | None:intergenic | 45.0% | |
CGGAATATGGCATTGTAAGG+TGG | + | chr2_1:62200765-62200784 | None:intergenic | 45.0% | |
AGTACTGTTCCCGGTAATTC+TGG | - | chr2_1:62200861-62200880 | Msa0216410:CDS | 45.0% | |
!! | TTCCGGTGTTGATTTCTTGC+CGG | - | chr2_1:62200935-62200954 | Msa0216410:intron | 45.0% |
GGCAAAGTAGAAGAATTCCC+CGG | + | chr2_1:62200957-62200976 | None:intergenic | 45.0% | |
GGGGAATTCTTCTACTTTGC+CGG | - | chr2_1:62200956-62200975 | Msa0216410:intron | 45.0% | |
TCTAGAAACCACAGCTTCAC+CGG | + | chr2_1:62200997-62201016 | None:intergenic | 45.0% | |
!! | AAAGTGAAGGAGGTTGGTAC+TGG | - | chr2_1:62201131-62201150 | Msa0216410:CDS | 45.0% |
!! | AAGTGAAGGAGGTTGGTACT+GGG | - | chr2_1:62201132-62201151 | Msa0216410:CDS | 45.0% |
TACTGGGAGACAGTTGACTA+TGG | - | chr2_1:62201148-62201167 | Msa0216410:CDS | 45.0% | |
! | GAGGAATTTGAGATGACGGT+TGG | - | chr2_1:62201170-62201189 | Msa0216410:intron | 45.0% |
! | GGTGTTGGAAATGGGAGTAA+TGG | - | chr2_1:62201263-62201282 | Msa0216410:intron | 45.0% |
GGAAAAAGAAAGGAGGGAGT+TGG | - | chr2_1:62201306-62201325 | Msa0216410:CDS | 45.0% | |
! | AGTGTTGCTAGTTCAATGGC+AGG | - | chr2_1:62201344-62201363 | Msa0216410:intron | 45.0% |
AGAGATACTTCGTCGGAGAA+AGG | - | chr2_1:62201395-62201414 | Msa0216410:intron | 45.0% | |
GCTACGGATGATAGTCAAGA+TGG | - | chr2_1:62201437-62201456 | Msa0216410:intron | 45.0% | |
GTCATTTCATGGACCTGAGA+GGG | - | chr2_1:62201460-62201479 | Msa0216410:intron | 45.0% | |
AGGGTGAGAGTGAGACAATA+TGG | - | chr2_1:62201479-62201498 | Msa0216410:CDS | 45.0% | |
GGGTGAGAGTGAGACAATAT+GGG | - | chr2_1:62201480-62201499 | Msa0216410:CDS | 45.0% | |
GGGAAATATCTTGCTAGTGC+TGG | - | chr2_1:62201593-62201612 | Msa0216410:intron | 45.0% | |
!! | ATATCTTGCTAGTGCTGGTG+AGG | - | chr2_1:62201598-62201617 | Msa0216410:CDS | 45.0% |
GATTCATGTTTGGCAGGTTG+TGG | - | chr2_1:62201628-62201647 | Msa0216410:CDS | 45.0% | |
TTGTGGAGTCTGAGAGGAAA+GGG | - | chr2_1:62201645-62201664 | Msa0216410:CDS | 45.0% | |
! | GAAAGGGGAGTTGTTGCTTA+TGG | - | chr2_1:62201661-62201680 | Msa0216410:CDS | 45.0% |
GTTGCTTATGGAGAAACAGG+AGG | - | chr2_1:62201673-62201692 | Msa0216410:CDS | 45.0% | |
! | TCCTTTGGCGGATAATCTTC+TGG | - | chr2_1:62201754-62201773 | Msa0216410:intron | 45.0% |
TCCAGAAGATTATCCGCCAA+AGG | + | chr2_1:62201758-62201777 | None:intergenic | 45.0% | |
! | TCTTCTGGAGAGGAAGAGAA+AGG | - | chr2_1:62201769-62201788 | Msa0216410:intron | 45.0% |
! | CTTCTGGAGAGGAAGAGAAA+GGG | - | chr2_1:62201770-62201789 | Msa0216410:intron | 45.0% |
! | TTCTGGAGAGGAAGAGAAAG+GGG | - | chr2_1:62201771-62201790 | Msa0216410:intron | 45.0% |
GTTGAGTTTGGACCAGTTTG+TGG | - | chr2_1:62201817-62201836 | Msa0216410:intron | 45.0% | |
GTGAGTGCAAACACATGTTC+GGG | + | chr2_1:62201845-62201864 | None:intergenic | 45.0% | |
ATGATGTGCTTGACCTCTCT+TGG | - | chr2_1:62201900-62201919 | Msa0216410:intron | 45.0% | |
! | GCTGAGTGTTTTCGATGACT+TGG | - | chr2_1:62201977-62201996 | Msa0216410:intron | 45.0% |
CATGTACTGTGGGAACAAGT+AGG | - | chr2_1:62202389-62202408 | Msa0216410:intron | 45.0% | |
GAATCACAACGTAACTCCGT+TGG | + | chr2_1:62202529-62202548 | None:intergenic | 45.0% | |
CGGAGTTACGTTGTGATTCT+AGG | - | chr2_1:62202530-62202549 | Msa0216410:intron | 45.0% | |
CTAGGCCTTTCTTGGAAAGA+CGG | - | chr2_1:62202548-62202567 | Msa0216410:intron | 45.0% | |
GAGGCAACTTACACACAACA+TGG | - | chr2_1:62202593-62202612 | Msa0216410:intron | 45.0% | |
TTCTTTGGGCAGGGGTTTAT+TGG | - | chr2_1:62203358-62203377 | Msa0216410:intron | 45.0% | |
GCACTTGCTCTCATCTTCAA+TGG | - | chr2_1:62203545-62203564 | Msa0216410:intron | 45.0% | |
CATGACTGCAACTCAGGTTT+AGG | + | chr2_1:62203692-62203711 | None:intergenic | 45.0% | |
AACCTGAGTTGCAGTCATGT+AGG | - | chr2_1:62203693-62203712 | Msa0216410:intron | 45.0% | |
GAAAAAAAACGGAGGGAACG+AGG | + | chr2_1:62203997-62204016 | None:intergenic | 45.0% | |
TGGATGCTAAGGTTCGCATA+TGG | - | chr2_1:62204121-62204140 | Msa0216410:CDS | 45.0% | |
CGGATCGACAAGTTGTTGAT+TGG | - | chr2_1:62204151-62204170 | Msa0216410:CDS | 45.0% | |
!! | GCTGCTTGTTATACACCTGA+TGG | - | chr2_1:62204198-62204217 | Msa0216410:CDS | 45.0% |
TATACACCTGATGGTCAGGT+TGG | - | chr2_1:62204207-62204226 | Msa0216410:CDS | 45.0% | |
ATTCTGACAATTGTGGCCAC+TGG | - | chr2_1:62204420-62204439 | Msa0216410:CDS | 45.0% | |
! | TCTCGAATACGGGTTGTTGA+TGG | - | chr2_1:62204682-62204701 | Msa0216410:CDS | 45.0% |
!! | TTTACCATTTGCTGTGAGGG+AGG | + | chr2_1:62204905-62204924 | None:intergenic | 45.0% |
GGAAAAATGAAGCCGATTGC+AGG | - | chr2_1:62204965-62204984 | Msa0216410:CDS | 45.0% | |
GGTGACACCTTTACTTCTGT+TGG | + | chr2_1:62204992-62205011 | None:intergenic | 45.0% | |
GTTGCTATCAAGCTCGGTTT+GGG | + | chr2_1:62205118-62205137 | None:intergenic | 45.0% | |
TGTTGCTATCAAGCTCGGTT+TGG | + | chr2_1:62205119-62205138 | None:intergenic | 45.0% | |
GTCGTTGTTGCTATCAAGCT+CGG | + | chr2_1:62205124-62205143 | None:intergenic | 45.0% | |
! | TTTTCCTCTACAGGTGTAGG+AGG | + | chr2_1:62205168-62205187 | None:intergenic | 45.0% |
! | ACACCGAAGTTTTCCTCTAC+AGG | + | chr2_1:62205177-62205196 | None:intergenic | 45.0% |
AAAAATGTCAGCCTGGGGTA+TGG | - | chr2_1:62205374-62205393 | Msa0216410:exon | 45.0% | |
AGTAACAATCACCATACCCC+AGG | + | chr2_1:62205388-62205407 | None:intergenic | 45.0% | |
GGTATGGTGATTGTTACTGC+CGG | - | chr2_1:62205390-62205409 | Msa0216410:five_prime_UTR | 45.0% | |
TCTAATCTCACCTCGAAGAC+CGG | + | chr2_1:62205412-62205431 | None:intergenic | 45.0% | |
AGATCACCTTCTCCATAAGC+TGG | - | chr2_1:62205530-62205549 | Msa0216410:five_prime_UTR | 45.0% | |
!! | TCTCACCCACTTTTCTGTAC+AGG | + | chr2_1:62205562-62205581 | None:intergenic | 45.0% |
!! | AGAGATTGGAGGGAGGTGTT+GGG | + | chr2_1:62200189-62200208 | None:intergenic | 50.0% |
GTTTGTGTGTGGCGAGAGAT+TGG | + | chr2_1:62200203-62200222 | None:intergenic | 50.0% | |
GTTGGAACAAGAGCAGGAAG+AGG | + | chr2_1:62200550-62200569 | None:intergenic | 50.0% | |
GTTGGAGTTGGAACAAGAGC+AGG | + | chr2_1:62200556-62200575 | None:intergenic | 50.0% | |
!! | CGACGTTCTGAAACGGAAGA+AGG | + | chr2_1:62200678-62200697 | None:intergenic | 50.0% |
! | TCCGATTTTGCCCTTTCACG+TGG | - | chr2_1:62200729-62200748 | Msa0216410:CDS | 50.0% |
GGATTGGGTTACCACGTGAA+AGG | + | chr2_1:62200743-62200762 | None:intergenic | 50.0% | |
ACTGTTCCCGGTAATTCTGG+CGG | - | chr2_1:62200864-62200883 | Msa0216410:CDS | 50.0% | |
GAAGAATTCTTTCCGGACGG+AGG | + | chr2_1:62200903-62200922 | None:intergenic | 50.0% | |
!! | TCCGGTGTTGATTTCTTGCC+GGG | - | chr2_1:62200936-62200955 | Msa0216410:intron | 50.0% |
TCTTCTACTTTGCCGGACAC+TGG | - | chr2_1:62200963-62200982 | Msa0216410:intron | 50.0% | |
TGAGATTTCCGGTGAAGCTG+TGG | - | chr2_1:62200986-62201005 | Msa0216410:intron | 50.0% | |
TGGGAGACAGTTGACTATGG+AGG | - | chr2_1:62201151-62201170 | Msa0216410:CDS | 50.0% | |
CGCATAAGCTCCTGCACAAT+CGG | + | chr2_1:62201203-62201222 | None:intergenic | 50.0% | |
! | GAGGAGACTGGTGATGTAAC+CGG | - | chr2_1:62201236-62201255 | Msa0216410:intron | 50.0% |
CAATGGCAGGTCATAAGGAG+AGG | - | chr2_1:62201357-62201376 | Msa0216410:intron | 50.0% | |
GATACTTCGTCGGAGAAAGG+CGG | - | chr2_1:62201398-62201417 | Msa0216410:intron | 50.0% | |
ATACTTCGTCGGAGAAAGGC+GGG | - | chr2_1:62201399-62201418 | Msa0216410:intron | 50.0% | |
GGTCATTTCATGGACCTGAG+AGG | - | chr2_1:62201459-62201478 | Msa0216410:intron | 50.0% | |
GTTGTGGAGTCTGAGAGGAA+AGG | - | chr2_1:62201644-62201663 | Msa0216410:CDS | 50.0% | |
TGTGGAGTCTGAGAGGAAAG+GGG | - | chr2_1:62201646-62201665 | Msa0216410:CDS | 50.0% | |
! | TGGCGGATAATCTTCTGGAG+AGG | - | chr2_1:62201759-62201778 | Msa0216410:intron | 50.0% |
CATGTTCGGGAACCACAAAC+TGG | + | chr2_1:62201832-62201851 | None:intergenic | 50.0% | |
CCTGAGACTTAGACCAAGAG+AGG | + | chr2_1:62201916-62201935 | None:intergenic | 50.0% | |
CCTCTCTTGGTCTAAGTCTC+AGG | - | chr2_1:62201913-62201932 | Msa0216410:intron | 50.0% | |
AAGTGGCTGAACAGGCATCA+AGG | - | chr2_1:62202181-62202200 | Msa0216410:intron | 50.0% | |
AGTGGCTGAACAGGCATCAA+GGG | - | chr2_1:62202182-62202201 | Msa0216410:intron | 50.0% | |
! | GGTTCGCATATGGAGCATTC+CGG | - | chr2_1:62204131-62204150 | Msa0216410:CDS | 50.0% |
CTTGAACCAACCTGACCATC+AGG | + | chr2_1:62204216-62204235 | None:intergenic | 50.0% | |
!! | CTGATGGTCAGGTTGGTTCA+AGG | - | chr2_1:62204214-62204233 | Msa0216410:CDS | 50.0% |
ACTTCTGTTGGGCCTGCAAT+CGG | + | chr2_1:62204980-62204999 | None:intergenic | 50.0% | |
TGCAGGCCCAACAGAAGTAA+AGG | - | chr2_1:62204982-62205001 | Msa0216410:CDS | 50.0% | |
ATGTGTCAGTAGCCATTCCC+TGG | - | chr2_1:62205046-62205065 | Msa0216410:CDS | 50.0% | |
TCATCCTCCTACACCTGTAG+AGG | - | chr2_1:62205161-62205180 | Msa0216410:CDS | 50.0% | |
!! | AGAGGAAAACTTCGGTGTCG+AGG | - | chr2_1:62205179-62205198 | Msa0216410:CDS | 50.0% |
!! | GAGGAAAACTTCGGTGTCGA+GGG | - | chr2_1:62205180-62205199 | Msa0216410:CDS | 50.0% |
ACTGTTTGTCGCACTCGCAA+TGG | + | chr2_1:62205247-62205266 | None:intergenic | 50.0% | |
TCAAAGCCCTCGTGTCAGTA+TGG | - | chr2_1:62205329-62205348 | Msa0216410:CDS | 50.0% | |
ATTGTTACTGCCGGTCTTCG+AGG | - | chr2_1:62205399-62205418 | Msa0216410:five_prime_UTR | 50.0% | |
!! | GAGATTGGAGGGAGGTGTTG+GGG | + | chr2_1:62200188-62200207 | None:intergenic | 55.0% |
! | GAGAGATTGGAGGGAGGTGT+TGG | + | chr2_1:62200190-62200209 | None:intergenic | 55.0% |
GTGTGTGGCGAGAGATTGGA+GGG | + | chr2_1:62200199-62200218 | None:intergenic | 55.0% | |
TGTGTGTGGCGAGAGATTGG+AGG | + | chr2_1:62200200-62200219 | None:intergenic | 55.0% | |
TTTCCGGACGGAGGTTTAGC+CGG | + | chr2_1:62200894-62200913 | None:intergenic | 55.0% | |
CCCCGGCAAGAAATCAACAC+CGG | + | chr2_1:62200940-62200959 | None:intergenic | 55.0% | |
!! | CCGGTGTTGATTTCTTGCCG+GGG | - | chr2_1:62200937-62200956 | Msa0216410:intron | 55.0% |
CCGGAAATCTCACCAGTGTC+CGG | + | chr2_1:62200978-62200997 | None:intergenic | 55.0% | |
CCGGACACTGGTGAGATTTC+CGG | - | chr2_1:62200975-62200994 | Msa0216410:intron | 55.0% | |
! | TGGTCAATCGCCGATTGTGC+AGG | - | chr2_1:62201190-62201209 | Msa0216410:intron | 55.0% |
TTGTGCAGGAGCTTATGCGC+CGG | - | chr2_1:62201204-62201223 | Msa0216410:intron | 55.0% | |
CAGTCTCCTCGTGATTCTGC+CGG | + | chr2_1:62201226-62201245 | None:intergenic | 55.0% | |
! | GAGACTGGTGATGTAACCGG+TGG | - | chr2_1:62201239-62201258 | Msa0216410:intron | 55.0% |
! | ACTGGTGATGTAACCGGTGG+TGG | - | chr2_1:62201242-62201261 | Msa0216410:intron | 55.0% |
! | GATGTAACCGGTGGTGGTGT+TGG | - | chr2_1:62201248-62201267 | Msa0216410:intron | 55.0% |
! | ACCGGTGGTGGTGTTGGAAA+TGG | - | chr2_1:62201254-62201273 | Msa0216410:intron | 55.0% |
CCCATTTCCAACACCACCAC+CGG | + | chr2_1:62201258-62201277 | None:intergenic | 55.0% | |
! | CCGGTGGTGGTGTTGGAAAT+GGG | - | chr2_1:62201255-62201274 | Msa0216410:intron | 55.0% |
TGGCAGGTCATAAGGAGAGG+AGG | - | chr2_1:62201360-62201379 | Msa0216410:intron | 55.0% | |
TGTCTCACTCTCACCCTCTC+AGG | + | chr2_1:62201476-62201495 | None:intergenic | 55.0% | |
ACCCGTGACGTTGTCTCCTT+TGG | - | chr2_1:62201739-62201758 | Msa0216410:intron | 55.0% | |
GCCAAAGGAGACAACGTCAC+GGG | + | chr2_1:62201743-62201762 | None:intergenic | 55.0% | |
CGCCAAAGGAGACAACGTCA+CGG | + | chr2_1:62201744-62201763 | None:intergenic | 55.0% | |
CGTGACGTTGTCTCCTTTGG+CGG | - | chr2_1:62201742-62201761 | Msa0216410:intron | 55.0% | |
TGGAGAGGAAGAGAAAGGGG+AGG | - | chr2_1:62201774-62201793 | Msa0216410:intron | 55.0% | |
ATGGTAACACCGGTGGGACT+AGG | - | chr2_1:62203241-62203260 | Msa0216410:intron | 55.0% | |
TGGACAAAACAGTGCGGCTG+TGG | - | chr2_1:62203565-62203584 | Msa0216410:intron | 55.0% | |
GGCCTACATGACTGCAACTC+AGG | + | chr2_1:62203698-62203717 | None:intergenic | 55.0% | |
TCTGTGCAGGGTGCACTAGT+TGG | - | chr2_1:62204299-62204318 | Msa0216410:CDS | 55.0% | |
CTGTGAGGGAGGCTGAAATC+TGG | + | chr2_1:62204894-62204913 | None:intergenic | 55.0% | |
TCAGCCTCCCTCACAGCAAA+TGG | - | chr2_1:62204898-62204917 | Msa0216410:CDS | 55.0% | |
GCCTGGTATGGGTGATGCAT+GGG | - | chr2_1:62205068-62205087 | Msa0216410:CDS | 55.0% | |
TCCCATGCATCACCCATACC+AGG | + | chr2_1:62205072-62205091 | None:intergenic | 55.0% | |
GAGGGTTCACGATCTGCTTC+AGG | - | chr2_1:62205198-62205217 | Msa0216410:CDS | 55.0% | |
CTCGCAATGGTTGCATGGTG+TGG | + | chr2_1:62205234-62205253 | None:intergenic | 55.0% | |
TCGCACTCGCAATGGTTGCA+TGG | + | chr2_1:62205239-62205258 | None:intergenic | 55.0% | |
!! | TGGAGGGAGGTGTTGGGGTT+CGG | + | chr2_1:62200183-62200202 | None:intergenic | 60.0% |
TGTGGCGAGAGATTGGAGGG+AGG | + | chr2_1:62200196-62200215 | None:intergenic | 60.0% | |
GGGGATCCGCCAGAATTACC+GGG | + | chr2_1:62200873-62200892 | None:intergenic | 60.0% | |
CGGGGATCCGCCAGAATTAC+CGG | + | chr2_1:62200874-62200893 | None:intergenic | 60.0% | |
! | CGGTAATTCTGGCGGATCCC+CGG | - | chr2_1:62200872-62200891 | Msa0216410:CDS | 60.0% |
TTCCGGACGGAGGTTTAGCC+GGG | + | chr2_1:62200893-62200912 | None:intergenic | 60.0% | |
! | TATGCGCCGGCAGAATCACG+AGG | - | chr2_1:62201217-62201236 | Msa0216410:intron | 60.0% |
CGGCAGAATCACGAGGAGAC+TGG | - | chr2_1:62201224-62201243 | Msa0216410:intron | 60.0% | |
GGCAGGTTGTGGAGTCTGAG+AGG | - | chr2_1:62201639-62201658 | Msa0216410:CDS | 60.0% | |
GGAGACAACGTCACGGGTTC+CGG | + | chr2_1:62201737-62201756 | None:intergenic | 60.0% | |
AGGGGAGGTCGTCCGTTAGT+AGG | - | chr2_1:62201789-62201808 | Msa0216410:intron | 60.0% | |
GGTGCTCATCCTAGTCCCAC+CGG | + | chr2_1:62203253-62203272 | None:intergenic | 60.0% | |
GGGACTAGGATGAGCACCTC+TGG | - | chr2_1:62203255-62203274 | Msa0216410:intron | 60.0% | |
TCAGTAGCCATTCCCTGGCC+TGG | - | chr2_1:62205051-62205070 | Msa0216410:CDS | 60.0% | |
AGCCATTCCCTGGCCTGGTA+TGG | - | chr2_1:62205056-62205075 | Msa0216410:CDS | 60.0% | |
GCCATTCCCTGGCCTGGTAT+GGG | - | chr2_1:62205057-62205076 | Msa0216410:CDS | 60.0% | |
ACCCATACCAGGCCAGGGAA+TGG | + | chr2_1:62205061-62205080 | None:intergenic | 60.0% | |
GCATCACCCATACCAGGCCA+GGG | + | chr2_1:62205066-62205085 | None:intergenic | 60.0% | |
TGCATCACCCATACCAGGCC+AGG | + | chr2_1:62205067-62205086 | None:intergenic | 60.0% | |
GGCCTGGTATGGGTGATGCA+TGG | - | chr2_1:62205067-62205086 | Msa0216410:CDS | 60.0% | |
TCCCCGGCTAAACCTCCGTC+CGG | - | chr2_1:62200888-62200907 | Msa0216410:CDS | 65.0% | |
TCCGGACGGAGGTTTAGCCG+GGG | + | chr2_1:62200892-62200911 | None:intergenic | 65.0% | |
CTTCGTCGGAGAAAGGCGGG+AGG | - | chr2_1:62201402-62201421 | Msa0216410:intron | 65.0% | |
GAGGAGGTCGAGCTCGGCTA+CGG | - | chr2_1:62201421-62201440 | Msa0216410:intron | 65.0% | |
CGTCGGAGAAAGGCGGGAGG+AGG | - | chr2_1:62201405-62201424 | Msa0216410:intron | 70.0% | |
AGGCGGGAGGAGGTCGAGCT+CGG | - | chr2_1:62201415-62201434 | Msa0216410:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 62200160 | 62205661 | 62200160 | ID=Msa0216410;Name=Msa0216410 |
chr2_1 | mRNA | 62200160 | 62205661 | 62200160 | ID=Msa0216410-mRNA-1;Parent=Msa0216410;Name=Msa0216410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=272|1|1|1|1|1|7|194|858 |
chr2_1 | exon | 62200160 | 62200949 | 62200160 | ID=Msa0216410-mRNA-1:exon:17256;Parent=Msa0216410-mRNA-1 |
chr2_1 | exon | 62201091 | 62201184 | 62201091 | ID=Msa0216410-mRNA-1:exon:17255;Parent=Msa0216410-mRNA-1 |
chr2_1 | exon | 62201267 | 62201349 | 62201267 | ID=Msa0216410-mRNA-1:exon:17254;Parent=Msa0216410-mRNA-1 |
chr2_1 | exon | 62201462 | 62201513 | 62201462 | ID=Msa0216410-mRNA-1:exon:17253;Parent=Msa0216410-mRNA-1 |
chr2_1 | exon | 62201597 | 62201754 | 62201597 | ID=Msa0216410-mRNA-1:exon:17252;Parent=Msa0216410-mRNA-1 |
chr2_1 | exon | 62202185 | 62202275 | 62202185 | ID=Msa0216410-mRNA-1:exon:17251;Parent=Msa0216410-mRNA-1 |
chr2_1 | exon | 62203887 | 62205661 | 62203887 | ID=Msa0216410-mRNA-1:exon:17250;Parent=Msa0216410-mRNA-1 |
chr2_1 | five_prime_UTR | 62205390 | 62205661 | 62205390 | ID=Msa0216410-mRNA-1:five_prime_utr;Parent=Msa0216410-mRNA-1 |
chr2_1 | CDS | 62203887 | 62205389 | 62203887 | ID=Msa0216410-mRNA-1:cds;Parent=Msa0216410-mRNA-1 |
chr2_1 | CDS | 62202185 | 62202275 | 62202185 | ID=Msa0216410-mRNA-1:cds;Parent=Msa0216410-mRNA-1 |
chr2_1 | CDS | 62201597 | 62201754 | 62201597 | ID=Msa0216410-mRNA-1:cds;Parent=Msa0216410-mRNA-1 |
chr2_1 | CDS | 62201462 | 62201513 | 62201462 | ID=Msa0216410-mRNA-1:cds;Parent=Msa0216410-mRNA-1 |
chr2_1 | CDS | 62201267 | 62201349 | 62201267 | ID=Msa0216410-mRNA-1:cds;Parent=Msa0216410-mRNA-1 |
chr2_1 | CDS | 62201091 | 62201184 | 62201091 | ID=Msa0216410-mRNA-1:cds;Parent=Msa0216410-mRNA-1 |
chr2_1 | CDS | 62200354 | 62200949 | 62200354 | ID=Msa0216410-mRNA-1:cds;Parent=Msa0216410-mRNA-1 |
chr2_1 | three_prime_UTR | 62200160 | 62200353 | 62200160 | ID=Msa0216410-mRNA-1:three_prime_utr;Parent=Msa0216410-mRNA-1 |
Gene Sequence |
Protein sequence |