Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0295740 | XP_013464737.1 | 96.353 | 850 | 11 | 5 | 1 | 835 | 1 | 845 | 0.0 | 1678 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0295740 | sp|Q498F0|WDR44_XENLA | 32.545 | 550 | 298 | 19 | 206 | 719 | 345 | 857 | 4.81e-67 | 244 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0295740 | A0A072VAE7 | 96.353 | 850 | 11 | 5 | 1 | 835 | 1 | 845 | 0.0 | 1678 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0198210 | Msa0295740 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
Msa0216410 | Msa0295740 | 0.861515 | 9.717833e-64 | -8.615850e-47 |
Msa0256600 | Msa0295740 | 0.918780 | 1.020720e-86 | -8.615850e-47 |
Msa0295740 | Msa0334270 | 0.953598 | 1.927344e-111 | -8.615850e-47 |
Msa0295740 | Msa0447440 | 0.830257 | 3.252167e-55 | -8.615850e-47 |
Msa0295740 | Msa0494950 | 0.830849 | 2.329763e-55 | -8.615850e-47 |
Msa0295740 | Msa0523650 | 0.826793 | 2.231934e-54 | -8.615850e-47 |
Msa0295740 | Msa1381100 | 0.805675 | 1.190700e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0295740 | MtrunA17_Chr2g0317931 | 96.353 | 850 | 11 | 5 | 1 | 835 | 1 | 845 | 0.0 | 1678 |
Msa0295740 | MtrunA17_Chr7g0238321 | 51.705 | 528 | 216 | 8 | 202 | 719 | 271 | 769 | 3.60e-164 | 502 |
Msa0295740 | MtrunA17_Chr8g0388841 | 33.415 | 817 | 408 | 24 | 25 | 831 | 7 | 697 | 4.30e-126 | 395 |
Msa0295740 | MtrunA17_Chr3g0127171 | 42.075 | 530 | 249 | 14 | 321 | 831 | 195 | 685 | 1.09e-120 | 381 |
Msa0295740 | MtrunA17_Chr1g0146771 | 43.539 | 503 | 232 | 16 | 339 | 831 | 232 | 692 | 1.63e-117 | 373 |
Msa0295740 | MtrunA17_Chr8g0384061 | 36.111 | 504 | 231 | 9 | 340 | 831 | 204 | 628 | 8.78e-87 | 290 |
Msa0295740 | MtrunA17_Chr3g0129821 | 42.632 | 380 | 190 | 6 | 340 | 719 | 168 | 519 | 1.56e-83 | 280 |
Msa0295740 | MtrunA17_Chr4g0067151 | 31.390 | 223 | 137 | 9 | 466 | 682 | 65 | 277 | 1.03e-24 | 106 |
Msa0295740 | MtrunA17_Chr1g0185501 | 29.302 | 215 | 134 | 10 | 475 | 682 | 65 | 268 | 7.62e-19 | 88.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0295740 | AT5G54200.1 | 57.864 | 852 | 282 | 14 | 9 | 839 | 21 | 816 | 0.0 | 889 |
Msa0295740 | AT3G15470.1 | 57.960 | 892 | 280 | 20 | 14 | 835 | 4 | 870 | 0.0 | 886 |
Msa0295740 | AT2G37670.1 | 52.037 | 540 | 190 | 11 | 202 | 718 | 248 | 741 | 4.77e-161 | 493 |
Msa0295740 | AT2G37670.2 | 52.037 | 540 | 190 | 11 | 202 | 718 | 249 | 742 | 5.69e-161 | 493 |
Msa0295740 | AT5G02430.1 | 52.290 | 524 | 222 | 8 | 202 | 719 | 258 | 759 | 1.43e-156 | 481 |
Msa0295740 | AT5G53500.2 | 41.155 | 554 | 245 | 15 | 284 | 831 | 159 | 637 | 1.25e-111 | 356 |
Msa0295740 | AT5G53500.1 | 41.155 | 554 | 245 | 15 | 284 | 831 | 159 | 637 | 1.25e-111 | 356 |
Msa0295740 | AT5G24320.1 | 41.098 | 528 | 240 | 12 | 321 | 831 | 204 | 677 | 7.77e-109 | 350 |
Msa0295740 | AT5G24320.2 | 40.789 | 532 | 240 | 13 | 321 | 831 | 204 | 681 | 1.05e-106 | 344 |
Msa0295740 | AT5G42010.1 | 39.648 | 512 | 233 | 14 | 342 | 830 | 233 | 691 | 1.06e-103 | 337 |
Msa0295740 | AT1G64610.2 | 39.431 | 492 | 239 | 13 | 342 | 830 | 194 | 629 | 1.82e-99 | 324 |
Msa0295740 | AT1G64610.1 | 39.431 | 492 | 239 | 13 | 342 | 830 | 194 | 629 | 1.82e-99 | 324 |
Msa0295740 | AT5G42010.2 | 47.447 | 333 | 161 | 8 | 342 | 672 | 233 | 553 | 1.02e-89 | 295 |
Msa0295740 | AT1G48870.2 | 32.389 | 494 | 245 | 9 | 340 | 832 | 172 | 577 | 3.33e-78 | 265 |
Msa0295740 | AT1G48870.3 | 32.389 | 494 | 245 | 9 | 340 | 832 | 172 | 577 | 3.33e-78 | 265 |
Msa0295740 | AT1G48870.1 | 32.389 | 494 | 245 | 9 | 340 | 832 | 172 | 577 | 3.33e-78 | 265 |
Msa0295740 | AT4G02730.1 | 29.224 | 219 | 138 | 10 | 475 | 686 | 81 | 289 | 2.37e-20 | 94.0 |
Msa0295740 | AT3G49660.1 | 28.636 | 220 | 141 | 9 | 470 | 683 | 62 | 271 | 3.80e-20 | 92.8 |
Msa0295740 | AT3G49660.1 | 24.198 | 343 | 206 | 13 | 353 | 682 | 11 | 312 | 6.62e-13 | 71.2 |
Msa0295740 | AT2G16405.1 | 25.410 | 244 | 146 | 9 | 464 | 682 | 199 | 431 | 1.75e-12 | 71.2 |
Find 256 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATATGTTATTTCTTGTTAA+TGG | 0.154159 | 2_3:-48429388 | Msa0295740:CDS |
AAACCCGTTTGCTCCTTTAA+AGG | 0.187744 | 2_3:-48429226 | Msa0295740:CDS |
GATCTGGTTCATAAGTTTAA+AGG | 0.211448 | 2_3:-48426386 | Msa0295740:intron |
TTTCTTGGTCTTCGTCTTCT+TGG | 0.228579 | 2_3:+48430484 | None:intergenic |
ATACTTCATTAGTGGATCTT+TGG | 0.232896 | 2_3:-48426994 | Msa0295740:CDS |
TCCATTATCAAGATCTCTTA+TGG | 0.253771 | 2_3:+48430032 | None:intergenic |
ATCATGCAAATGACCTTTAA+AGG | 0.262544 | 2_3:+48429213 | None:intergenic |
GAATGCGATGAAATTGAAAA+AGG | 0.265376 | 2_3:-48430072 | Msa0295740:CDS |
AGTATTAAGTTTAGTTTAGA+TGG | 0.278056 | 2_3:-48429523 | Msa0295740:CDS |
CCCTTAACAGTTACGACATA+TGG | 0.289130 | 2_3:-48430425 | Msa0295740:CDS |
AAGCTCATAATGGATCAATT+TGG | 0.292538 | 2_3:-48429546 | Msa0295740:CDS |
TCAAATCACAAGAAAATTAC+TGG | 0.302245 | 2_3:-48426570 | Msa0295740:CDS |
AGTACTGTTCCCGGTAATTC+TGG | 0.305266 | 2_3:-48430204 | Msa0295740:CDS |
TCCTTTGGCGGATAATCTTC+TGG | 0.309791 | 2_3:-48429341 | Msa0295740:CDS |
TTCCGGTGTTGATTTCTTGC+CGG | 0.310114 | 2_3:-48430130 | Msa0295740:CDS |
GGGGAATTCTTCTACTTTGC+CGG | 0.310297 | 2_3:-48430109 | Msa0295740:CDS |
TGGTAATGGAGGTTGTTCTA+AGG | 0.310884 | 2_3:-48429812 | Msa0295740:CDS |
TCTTCTAGAAGAATTCTTTC+CGG | 0.314096 | 2_3:+48430158 | None:intergenic |
CAAGAAAATTACTGGTTTCC+AGG | 0.315246 | 2_3:-48426562 | Msa0295740:intron |
ATATGTTATTTCTTGTTAAT+GGG | 0.320409 | 2_3:-48429387 | Msa0295740:CDS |
AGGGTGAGAGTGAGACAATA+TGG | 0.320663 | 2_3:-48429616 | Msa0295740:CDS |
GAAAGGGGAGTTGTTGCTTA+TGG | 0.321504 | 2_3:-48429434 | Msa0295740:CDS |
CGGATCGACAAGTTGTTGAT+TGG | 0.329763 | 2_3:-48426944 | Msa0295740:CDS |
ACCCGTGACGTTGTCTCCTT+TGG | 0.330639 | 2_3:-48429356 | Msa0295740:CDS |
CGGGGATCCGCCAGAATTAC+CGG | 0.330665 | 2_3:+48430194 | None:intergenic |
GTCAGATTTGGATCGGAATA+TGG | 0.333292 | 2_3:+48430293 | None:intergenic |
GGGGTTGTTGAGATTGAGAT+TGG | 0.333340 | 2_3:+48430664 | None:intergenic |
GGAGACAACGTCACGGGTTC+CGG | 0.336795 | 2_3:+48429361 | None:intergenic |
AATGAGAATGGGTTTGTTCA+TGG | 0.340709 | 2_3:+48430635 | None:intergenic |
GCCGGTGGTGGTGTTGGAAA+TGG | 0.352022 | 2_3:-48429841 | Msa0295740:CDS |
CCTCTCTTGGTCTAAGTCTC+AGG | 0.354450 | 2_3:-48429182 | Msa0295740:intron |
ACTCGTCTTCTTCAAACTAT+TGG | 0.355721 | 2_3:-48430369 | Msa0295740:CDS |
AGCCATTCCCTGGCCTGGTA+TGG | 0.363748 | 2_3:-48426039 | Msa0295740:CDS |
GAGGGTTCACGATCTGCTTC+AGG | 0.366525 | 2_3:-48425897 | Msa0295740:CDS |
GTCAGTATGGATTTCACAAA+TGG | 0.367312 | 2_3:-48425753 | Msa0295740:CDS |
AAAGTGAAGGAGGTTGGTAC+TGG | 0.368514 | 2_3:-48429964 | Msa0295740:CDS |
TGGAGCGAGGTGTTGGGGTT+CGG | 0.369874 | 2_3:+48430885 | None:intergenic |
GATGATAGATACTTCATTAG+TGG | 0.371354 | 2_3:-48427002 | Msa0295740:CDS |
TCCGGTGTTGATTTCTTGCC+GGG | 0.372760 | 2_3:-48430129 | Msa0295740:CDS |
ACCATAAGAGATCTTGATAA+TGG | 0.372863 | 2_3:-48430033 | Msa0295740:CDS |
AGAGATTGGAGCGAGGTGTT+GGG | 0.377092 | 2_3:+48430879 | None:intergenic |
GGTGACACCTTTACTTCTGT+TGG | 0.380370 | 2_3:+48426106 | None:intergenic |
TAGTAGGAAGTCGTTGAGTT+TGG | 0.382361 | 2_3:-48429290 | Msa0295740:CDS |
TCAAAGCCCTCGTGTCAGTA+TGG | 0.385856 | 2_3:-48425766 | Msa0295740:CDS |
TCCATATGTCGTAACTGTTA+AGG | 0.386442 | 2_3:+48430424 | None:intergenic |
ATGGCATTGTAAGGTGGGAT+TGG | 0.388194 | 2_3:+48430312 | None:intergenic |
TATCATCAACAGGATTAAAC+TGG | 0.390022 | 2_3:+48427018 | None:intergenic |
CGCATAAGCTCCTGCACAAT+CGG | 0.393774 | 2_3:+48429895 | None:intergenic |
TGTGAAGAATGAATGAGTTA+AGG | 0.398605 | 2_3:+48430843 | None:intergenic |
ACTTCTGTTGGGCCTGCAAT+CGG | 0.398774 | 2_3:+48426118 | None:intergenic |
GTGACACCTTTACTTCTGTT+GGG | 0.400336 | 2_3:+48426107 | None:intergenic |
TTCGTCTTCTTGGTCAGAGT+TGG | 0.402171 | 2_3:+48430494 | None:intergenic |
GCCTGGTATGGGTGATGCAT+GGG | 0.403215 | 2_3:-48426027 | Msa0295740:CDS |
GTTGTTGCTTATGGAGAAAC+AGG | 0.403691 | 2_3:-48429425 | Msa0295740:CDS |
AGTACTTCTGATGAACTTCC+TGG | 0.405091 | 2_3:+48426452 | None:intergenic |
GTGAAAGAAGTTAGAGAAGA+TGG | 0.405227 | 2_3:-48429997 | Msa0295740:CDS |
GTTGATGTTGTTGTTGGAGT+TGG | 0.406911 | 2_3:+48430601 | None:intergenic |
GGCCTGGTATGGGTGATGCA+TGG | 0.409184 | 2_3:-48426028 | Msa0295740:CDS |
ACCACGTGAAAGGGCAAAAT+CGG | 0.410979 | 2_3:+48430338 | None:intergenic |
CCATATGTCGTAACTGTTAA+GGG | 0.412326 | 2_3:+48430425 | None:intergenic |
CAAGAGATTCAAGCTCATAA+TGG | 0.414387 | 2_3:-48429556 | Msa0295740:CDS |
GTTGTTATGACCGTCAGATT+TGG | 0.414968 | 2_3:+48430281 | None:intergenic |
GTTGGTGTTGATGTTGTTGT+TGG | 0.416733 | 2_3:+48430595 | None:intergenic |
TTCCGGACGGAGGTTTAGCC+GGG | 0.417860 | 2_3:+48430175 | None:intergenic |
GATTCATGTTTGGCAGGTTG+TGG | 0.418930 | 2_3:-48429467 | Msa0295740:CDS |
GTTTGTGTATGGTGAGAGAT+TGG | 0.420689 | 2_3:+48430865 | None:intergenic |
AACCACACTAACATTTGCTC+AGG | 0.422037 | 2_3:-48430722 | Msa0295740:five_prime_UTR |
TTTACAGTGAAAATGTTCAT+AGG | 0.422742 | 2_3:+48426073 | None:intergenic |
ATGATGTGCTTGACCTCTCT+TGG | 0.423598 | 2_3:-48429195 | Msa0295740:CDS |
TTGTGGAGTCTGAGAGGAAA+GGG | 0.424221 | 2_3:-48429450 | Msa0295740:CDS |
TTCTTCTACTTTGCCGGACA+CGG | 0.424991 | 2_3:-48430103 | Msa0295740:CDS |
GAGAGATTGGAGCGAGGTGT+TGG | 0.426085 | 2_3:+48430878 | None:intergenic |
CATTCTATTTCACCCGTGTC+CGG | 0.427553 | 2_3:+48430090 | None:intergenic |
ATTCGTAGAAGAAATCTTGT+TGG | 0.429715 | 2_3:+48430565 | None:intergenic |
AATGTAAATAGTACTGTTCC+CGG | 0.431742 | 2_3:-48430213 | Msa0295740:CDS |
AGGATTGTGTGATTCATGTT+TGG | 0.432003 | 2_3:-48429477 | Msa0295740:CDS |
AGTGAGTGCAAACACATGTT+CGG | 0.432044 | 2_3:+48429252 | None:intergenic |
AGGATTCCCATGTATACATC+TGG | 0.438205 | 2_3:-48426151 | Msa0295740:CDS |
TACTGGGAGACAGTTGACTA+TGG | 0.438212 | 2_3:-48429947 | Msa0295740:CDS |
AGTCAAGATGGGTCATTTCA+TGG | 0.438874 | 2_3:-48429646 | Msa0295740:CDS |
TTGTTATACACCTGATGGTC+AGG | 0.439552 | 2_3:-48426892 | Msa0295740:intron |
GATCGGAATATGGCATTGTA+AGG | 0.442136 | 2_3:+48430303 | None:intergenic |
CTGTGAGGGAGGCTGAAATC+TGG | 0.442676 | 2_3:+48426204 | None:intergenic |
TGTCTCACTCTCACCCTCTC+AGG | 0.442951 | 2_3:+48429622 | None:intergenic |
CTTGAACCAACCTGACCATC+AGG | 0.443778 | 2_3:+48426882 | None:intergenic |
TTTGAGAGAGATTTAAGAGA+GGG | 0.447068 | 2_3:+48430814 | None:intergenic |
GTTGAGTTTGGACCAGTTTG+TGG | 0.447377 | 2_3:-48429278 | Msa0295740:CDS |
TGGCATTGTAAGGTGGGATT+GGG | 0.449165 | 2_3:+48430313 | None:intergenic |
AGGGGAGGTCGTCCGTTAGT+AGG | 0.450408 | 2_3:-48429306 | Msa0295740:CDS |
GCCATTCCCTGGCCTGGTAT+GGG | 0.450820 | 2_3:-48426038 | Msa0295740:CDS |
CTTCTGGAGAGGAAGAGAAA+GGG | 0.453072 | 2_3:-48429325 | Msa0295740:CDS |
GGTTCGCATATGGAGCATTC+CGG | 0.453183 | 2_3:-48426964 | Msa0295740:CDS |
TAGTTCAATGGCGGGTCATA+AGG | 0.453276 | 2_3:-48429743 | Msa0295740:CDS |
TCTCGAATACGGGTTGTTGA+TGG | 0.453927 | 2_3:-48426413 | Msa0295740:CDS |
ATGAAGTATCTATCATCAAC+AGG | 0.454580 | 2_3:+48427008 | None:intergenic |
TGGATGCTAAGGTTCGCATA+TGG | 0.456377 | 2_3:-48426974 | Msa0295740:CDS |
GTCGTTGTTGCTATCAAGCT+CGG | 0.457779 | 2_3:+48425974 | None:intergenic |
TAGTGGATCTTTGGATGCTA+AGG | 0.458377 | 2_3:-48426985 | Msa0295740:CDS |
ATGACCTTTAAAGGAGCAAA+CGG | 0.460221 | 2_3:+48429222 | None:intergenic |
AGAGATACTTCGTCGGAGAA+AGG | 0.460899 | 2_3:-48429700 | Msa0295740:CDS |
GGGTGAGAGTGAGACAATAT+GGG | 0.461483 | 2_3:-48429615 | Msa0295740:CDS |
TCTTCTAGAAGAAGTCATTC+CGG | 0.463152 | 2_3:-48430147 | Msa0295740:CDS |
AGTAGAAGAAGAGATAAAAC+AGG | 0.465592 | 2_3:+48430239 | None:intergenic |
GCACTTGCTCTCATCTTCAA+TGG | 0.466256 | 2_3:-48427550 | Msa0295740:CDS |
GGTTGTTGATGGTATTGATC+TGG | 0.466728 | 2_3:-48426402 | Msa0295740:CDS |
TGCATCACCCATACCAGGCC+AGG | 0.466953 | 2_3:+48426031 | None:intergenic |
CCGGTGGTGGTGTTGGAAAT+GGG | 0.467471 | 2_3:-48429840 | Msa0295740:CDS |
GGTAATGGAGGTTGTTCTAA+GGG | 0.468975 | 2_3:-48429811 | Msa0295740:CDS |
AATCTTGTTGGTCTAGTTGT+TGG | 0.470295 | 2_3:+48430577 | None:intergenic |
GTGAGTGCAAACACATGTTC+GGG | 0.470370 | 2_3:+48429253 | None:intergenic |
GGAAGAAGAAAGGAGGGAGT+TGG | 0.471803 | 2_3:-48429789 | Msa0295740:CDS |
CGGTAATTCTGGCGGATCCC+CGG | 0.475497 | 2_3:-48430193 | Msa0295740:CDS |
CATGTTCGGGAACCACAAAC+TGG | 0.476756 | 2_3:+48429266 | None:intergenic |
GTATTAAGTTTAGTTTAGAT+GGG | 0.476966 | 2_3:-48429522 | Msa0295740:CDS |
TTGTGTGATTCATGTTTGGC+AGG | 0.477071 | 2_3:-48429473 | Msa0295740:CDS |
TTTCCGGACGGAGGTTTAGC+CGG | 0.477265 | 2_3:+48430174 | None:intergenic |
AAGAGGAGAGAGAGAGTAAA+CGG | 0.478902 | 2_3:+48430535 | None:intergenic |
TCAGTAGCCATTCCCTGGCC+TGG | 0.479922 | 2_3:-48426044 | Msa0295740:CDS |
CATCTGCTGATTCTCGAATA+CGG | 0.481379 | 2_3:-48426424 | Msa0295740:CDS |
ATATTTACCATTTGCTGTGA+GGG | 0.481702 | 2_3:+48426190 | None:intergenic |
CGTGACGTTGTCTCCTTTGG+CGG | 0.482687 | 2_3:-48429353 | Msa0295740:CDS |
ACCGGTGATGTAGCCGGTGG+TGG | 0.485090 | 2_3:-48429853 | Msa0295740:CDS |
TGTCATTTATATAATACATC+TGG | 0.485507 | 2_3:-48426757 | Msa0295740:intron |
TCAGCCTCCCTCACAGCAAA+TGG | 0.486149 | 2_3:-48426197 | Msa0295740:CDS |
TGTTCTAAGGGGAAGAAGAA+AGG | 0.488845 | 2_3:-48429799 | Msa0295740:CDS |
TGGACAAAACAGTGCGGCTG+TGG | 0.490355 | 2_3:-48427530 | Msa0295740:CDS |
GTTGAGATTGAGATTGGGAT+TGG | 0.490619 | 2_3:+48430670 | None:intergenic |
GGGTTGTTGAGATTGAGATT+GGG | 0.491004 | 2_3:+48430665 | None:intergenic |
TTGAGATTGAGATTGGGATT+GGG | 0.492778 | 2_3:+48430671 | None:intergenic |
TCAGTATGGATTTCACAAAT+GGG | 0.493127 | 2_3:-48425752 | Msa0295740:CDS |
ATTGTTACTGCTGGTCTTCG+AGG | 0.493885 | 2_3:-48425696 | Msa0295740:intron |
CAATCAACAACTTGTCGATC+CGG | 0.494327 | 2_3:+48426945 | None:intergenic |
ACGAGTACGACGTTCTGAAA+CGG | 0.496617 | 2_3:+48430386 | None:intergenic |
TCTGTGCAGGGTGCACTAGT+TGG | 0.499249 | 2_3:-48426796 | Msa0295740:intron |
TACAGGTGTAGGAGGATGAT+TGG | 0.499821 | 2_3:+48425938 | None:intergenic |
TGGAATAAAGTGAAGGAGGT+TGG | 0.500727 | 2_3:-48429970 | Msa0295740:CDS |
GATGTAGCCGGTGGTGGTGT+TGG | 0.500879 | 2_3:-48429847 | Msa0295740:CDS |
TTCTTGGTCAGAGTTGGAGT+TGG | 0.500980 | 2_3:+48430500 | None:intergenic |
ACACAGAAACATTTGCTCTC+TGG | 0.501437 | 2_3:-48430908 | Msa0295740:five_prime_UTR |
CGGAATATGGCATTGTAAGG+TGG | 0.504983 | 2_3:+48430306 | None:intergenic |
CGAGTTGATATCAGCTCAGA+AGG | 0.505155 | 2_3:-48425584 | Msa0295740:CDS |
TAGAATTTCTGCAACATGGC+CGG | 0.505340 | 2_3:-48425817 | Msa0295740:CDS |
GTCTTCTTGAGAAATGAGAA+TGG | 0.506187 | 2_3:+48430623 | None:intergenic |
TCTTCTGGAGAGGAAGAGAA+AGG | 0.514361 | 2_3:-48429326 | Msa0295740:CDS |
GTTGGAGTTGGAACAAGAGC+AGG | 0.515164 | 2_3:+48430512 | None:intergenic |
GAGGAGGTCGAGCTCGGCTA+CGG | 0.516325 | 2_3:-48429674 | Msa0295740:CDS |
TCTTCTTGAGAAATGAGAAT+GGG | 0.517246 | 2_3:+48430624 | None:intergenic |
CACTAACATTTGCTCAGGGA+AGG | 0.519154 | 2_3:-48430717 | Msa0295740:five_prime_UTR |
CGTCGGAGAAAGGCGGGAGG+AGG | 0.519256 | 2_3:-48429690 | Msa0295740:CDS |
GGTATGGTGATTGTTACTGC+TGG | 0.519931 | 2_3:-48425705 | Msa0295740:CDS |
CCCATTTCCAACACCACCAC+CGG | 0.520955 | 2_3:+48429840 | None:intergenic |
ATCTGCTGATTCTCGAATAC+GGG | 0.522317 | 2_3:-48426423 | Msa0295740:CDS |
TGCACTAGTTGGTTCATACA+AGG | 0.522538 | 2_3:-48426785 | Msa0295740:CDS |
TGGTCAATCTCCGATTGTGC+AGG | 0.524667 | 2_3:-48429905 | Msa0295740:CDS |
TGACCTTTAAAGGAGCAAAC+GGG | 0.525285 | 2_3:+48429223 | None:intergenic |
GTTGGAACAAGAGCAGGAAG+AGG | 0.525322 | 2_3:+48430518 | None:intergenic |
GGATTGGGTTACCACGTGAA+AGG | 0.527047 | 2_3:+48430328 | None:intergenic |
CAAGAGTGTTGCTAGTTCAA+TGG | 0.527850 | 2_3:-48429755 | Msa0295740:CDS |
ATACTTCGTCGGAGAAAGGC+GGG | 0.528933 | 2_3:-48429696 | Msa0295740:CDS |
GGGAAATATCTTGCTAGTGC+TGG | 0.528990 | 2_3:-48429502 | Msa0295740:CDS |
CTAAGGGGAAGAAGAAAGGA+GGG | 0.531994 | 2_3:-48429795 | Msa0295740:CDS |
ACCACCACCGGCTACATCAC+CGG | 0.532113 | 2_3:+48429852 | None:intergenic |
TCCCATGCATCACCCATACC+AGG | 0.535005 | 2_3:+48426026 | None:intergenic |
GAGATTGGAGCGAGGTGTTG+GGG | 0.536749 | 2_3:+48430880 | None:intergenic |
TGCAGGCCCAACAGAAGTAA+AGG | 0.537014 | 2_3:-48426113 | Msa0295740:CDS |
AGGCGGGAGGAGGTCGAGCT+CGG | 0.539651 | 2_3:-48429680 | Msa0295740:CDS |
GTACTTCTGATGAACTTCCT+GGG | 0.541085 | 2_3:+48426453 | None:intergenic |
GGAATATGGCATTGTAAGGT+GGG | 0.542196 | 2_3:+48430307 | None:intergenic |
GCTACGGATGATAGTCAAGA+TGG | 0.542559 | 2_3:-48429658 | Msa0295740:CDS |
AATGAGTTAAGGTTTGTGTA+TGG | 0.542837 | 2_3:+48430854 | None:intergenic |
TCCCCGGCTAAACCTCCGTC+CGG | 0.543498 | 2_3:-48430177 | Msa0295740:CDS |
CGGTCTCCTCATGATTCTGC+CGG | 0.544667 | 2_3:+48429872 | None:intergenic |
TCGATAGAATTTCTGCAACA+TGG | 0.545086 | 2_3:-48425821 | Msa0295740:CDS |
AGATCACCTTCTCCATAAGC+TGG | 0.546253 | 2_3:-48425555 | Msa0295740:CDS |
CGACGTTCTGAAACGGAAGA+AGG | 0.546555 | 2_3:+48430393 | None:intergenic |
ATTTGAGAGAGATTTAAGAG+AGG | 0.546952 | 2_3:+48430813 | None:intergenic |
TGTGGAGTCTGAGAGGAAAG+GGG | 0.547241 | 2_3:-48429449 | Msa0295740:CDS |
CTCGCAATGGTTGCATGGTG+TGG | 0.549432 | 2_3:+48425864 | None:intergenic |
AAGTTAGAGAAGATGGAATG+TGG | 0.550294 | 2_3:-48429990 | Msa0295740:CDS |
GATTGGGTTACCACGTGAAA+GGG | 0.551300 | 2_3:+48430329 | None:intergenic |
TCTAAGGGGAAGAAGAAAGG+AGG | 0.552386 | 2_3:-48429796 | Msa0295740:CDS |
GGAAATGGGAGTAATGGTAA+TGG | 0.552792 | 2_3:-48429826 | Msa0295740:CDS |
TATGACCGTCAGATTTGGAT+CGG | 0.552937 | 2_3:+48430286 | None:intergenic |
GAGGAATTTGAGATGACGGT+TGG | 0.552951 | 2_3:-48429925 | Msa0295740:CDS |
TCTTCTACTTTGCCGGACAC+GGG | 0.553423 | 2_3:-48430102 | Msa0295740:CDS |
ACTGTTTGTCGCACTCGCAA+TGG | 0.554025 | 2_3:+48425851 | None:intergenic |
AAGTGAAGGAGGTTGGTACT+GGG | 0.559730 | 2_3:-48429963 | Msa0295740:CDS |
GAGGAGACCGGTGATGTAGC+CGG | 0.560566 | 2_3:-48429859 | Msa0295740:CDS |
TCCCTGAGCAAATGTTAGTG+TGG | 0.561014 | 2_3:+48430720 | None:intergenic |
ATTTCTTGTTAATGGGTCGC+CGG | 0.562164 | 2_3:-48429380 | Msa0295740:CDS |
TTGGATCGATCTTCATGAGA+TGG | 0.562964 | 2_3:-48426925 | Msa0295740:CDS |
ACCCATACCAGGCCAGGGAA+TGG | 0.565424 | 2_3:+48426037 | None:intergenic |
ATGTGTCAGTAGCCATTCCC+TGG | 0.566854 | 2_3:-48426049 | Msa0295740:CDS |
TCGCACTCGCAATGGTTGCA+TGG | 0.572307 | 2_3:+48425859 | None:intergenic |
GGTGTTGGAAATGGGAGTAA+TGG | 0.576549 | 2_3:-48429832 | Msa0295740:CDS |
GATACTTCGTCGGAGAAAGG+CGG | 0.578609 | 2_3:-48429697 | Msa0295740:CDS |
TTTACCATTTGCTGTGAGGG+AGG | 0.584191 | 2_3:+48426193 | None:intergenic |
AGAGGAAAACTTCGGTGTCG+AGG | 0.584446 | 2_3:-48425916 | Msa0295740:CDS |
AGTGTTGCTAGTTCAATGGC+GGG | 0.585999 | 2_3:-48429751 | Msa0295740:CDS |
TTCTGGAGAGGAAGAGAAAG+GGG | 0.586118 | 2_3:-48429324 | Msa0295740:CDS |
GGGGATCCGCCAGAATTACC+GGG | 0.588995 | 2_3:+48430195 | None:intergenic |
CGGCAGAATCATGAGGAGAC+CGG | 0.589002 | 2_3:-48429871 | Msa0295740:CDS |
GCCAAAGGAGACAACGTCAC+GGG | 0.589907 | 2_3:+48429355 | None:intergenic |
ATATATTGTTGCTGCAAGTG+AGG | 0.589984 | 2_3:-48426171 | Msa0295740:CDS |
GAGGAAAACTTCGGTGTCGA+GGG | 0.590606 | 2_3:-48425915 | Msa0295740:CDS |
TCATCCTCCTACACCTGTAG+AGG | 0.591962 | 2_3:-48425934 | Msa0295740:CDS |
CTAGAAGAATTCTTTCCGGA+CGG | 0.592446 | 2_3:+48430162 | None:intergenic |
GAAGAATTCTTTCCGGACGG+AGG | 0.594884 | 2_3:+48430165 | None:intergenic |
ATATCTTGCTAGTGCTGGTG+AGG | 0.595765 | 2_3:-48429497 | Msa0295740:CDS |
AATGGGAGTAATGGTAATGG+AGG | 0.600063 | 2_3:-48429823 | Msa0295740:CDS |
GGCAAAGTAGAAGAATTCCC+CGG | 0.602827 | 2_3:+48430111 | None:intergenic |
AGTAACAATCACCATACCCC+AGG | 0.610628 | 2_3:+48425710 | None:intergenic |
TCCAGAAGATTATCCGCCAA+AGG | 0.612551 | 2_3:+48429340 | None:intergenic |
ACTAACATTTGCTCAGGGAA+GGG | 0.613923 | 2_3:-48430716 | Msa0295740:five_prime_UTR |
GTTGTGGAGTCTGAGAGGAA+AGG | 0.615157 | 2_3:-48429451 | Msa0295740:CDS |
GTCATTTCATGGACCTGAGA+GGG | 0.616808 | 2_3:-48429635 | Msa0295740:CDS |
TATATTTACCATTTGCTGTG+AGG | 0.618354 | 2_3:+48426189 | None:intergenic |
ACCACACTAACATTTGCTCA+GGG | 0.618518 | 2_3:-48430721 | Msa0295740:five_prime_UTR |
TATGGAGGAATTTGAGATGA+CGG | 0.619376 | 2_3:-48429929 | Msa0295740:CDS |
GCATCACCCATACCAGGCCA+GGG | 0.621344 | 2_3:+48426032 | None:intergenic |
GCTGCTTGTTATACACCTGA+TGG | 0.625541 | 2_3:-48426897 | Msa0295740:CDS |
GGCAGGTTGTGGAGTCTGAG+AGG | 0.626338 | 2_3:-48429456 | Msa0295740:CDS |
TACTTCTGATGAACTTCCTG+GGG | 0.627143 | 2_3:+48426454 | None:intergenic |
CTACGGATGATAGTCAAGAT+GGG | 0.627312 | 2_3:-48429657 | Msa0295740:CDS |
TGGCGGATAATCTTCTGGAG+AGG | 0.629487 | 2_3:-48429336 | Msa0295740:CDS |
CCTGAGACTTAGACCAAGAG+AGG | 0.630082 | 2_3:+48429182 | None:intergenic |
CCGGTGTTGATTTCTTGCCG+GGG | 0.630342 | 2_3:-48430128 | Msa0295740:CDS |
TTGTGCAGGAGCTTATGCGC+CGG | 0.632452 | 2_3:-48429891 | Msa0295740:CDS |
GAGTGTTGCTAGTTCAATGG+CGG | 0.637336 | 2_3:-48429752 | Msa0295740:CDS |
TGGAATGTGGAATAAAGTGA+AGG | 0.638048 | 2_3:-48429977 | Msa0295740:CDS |
CAATGGCGGGTCATAAGGAG+AGG | 0.638802 | 2_3:-48429738 | Msa0295740:CDS |
TGGAGAGGAAGAGAAAGGGG+AGG | 0.640683 | 2_3:-48429321 | Msa0295740:CDS |
CCCCGGCAAGAAATCAACAC+CGG | 0.643592 | 2_3:+48430128 | None:intergenic |
TGGCGGGTCATAAGGAGAGG+AGG | 0.643676 | 2_3:-48429735 | Msa0295740:CDS |
GTAATGGAGGTTGTTCTAAG+GGG | 0.650046 | 2_3:-48429810 | Msa0295740:CDS |
TGATGAGAGAGATACTTCGT+CGG | 0.650321 | 2_3:-48429707 | Msa0295740:CDS |
ATATTCCGATCCAAATCTGA+CGG | 0.651541 | 2_3:-48430291 | Msa0295740:CDS |
ACTCAACGACTTCCTACTAA+CGG | 0.653986 | 2_3:+48429294 | None:intergenic |
CAGTATGGATTTCACAAATG+GGG | 0.657850 | 2_3:-48425751 | Msa0295740:CDS |
CGCCAAAGGAGACAACGTCA+CGG | 0.658328 | 2_3:+48429354 | None:intergenic |
ACTGTTCCCGGTAATTCTGG+CGG | 0.661998 | 2_3:-48430201 | Msa0295740:CDS |
GGTCATTTCATGGACCTGAG+AGG | 0.666445 | 2_3:-48429636 | Msa0295740:CDS |
TATGCGCCGGCAGAATCATG+AGG | 0.668765 | 2_3:-48429878 | Msa0295740:CDS |
GTTGCTTATGGAGAAACAGG+AGG | 0.670617 | 2_3:-48429422 | Msa0295740:CDS |
TGGGAGACAGTTGACTATGG+AGG | 0.676143 | 2_3:-48429944 | Msa0295740:CDS |
ACACCTGTAGAGGAAAACTT+CGG | 0.682782 | 2_3:-48425924 | Msa0295740:CDS |
GCACTAGTTGGTTCATACAA+GGG | 0.684365 | 2_3:-48426784 | Msa0295740:CDS |
TCCGGACGGAGGTTTAGCCG+GGG | 0.685261 | 2_3:+48430176 | None:intergenic |
AATGTGGAATAAAGTGAAGG+AGG | 0.688067 | 2_3:-48429974 | Msa0295740:CDS |
GTGAAATCCATACTGACACG+AGG | 0.695168 | 2_3:+48425759 | None:intergenic |
ATGTTCATAGGACTGTGTCA+CGG | 0.698331 | 2_3:+48426085 | None:intergenic |
TGAAATCCATACTGACACGA+GGG | 0.711651 | 2_3:+48425760 | None:intergenic |
TATGGTGAGAGATTGGAGCG+AGG | 0.720760 | 2_3:+48430872 | None:intergenic |
CTTCGTCGGAGAAAGGCGGG+AGG | 0.733071 | 2_3:-48429693 | Msa0295740:CDS |
GAGACCGGTGATGTAGCCGG+TGG | 0.736645 | 2_3:-48429856 | Msa0295740:CDS |
CTTCAATGGACAAAACAGTG+CGG | 0.776088 | 2_3:-48427536 | Msa0295740:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATGTTATTTCTTGTTAA+TGG | - | chr2_3:48427045-48427064 | Msa0295740:intron | 15.0% |
!!! | ATATGTTATTTCTTGTTAAT+GGG | - | chr2_3:48427046-48427065 | Msa0295740:intron | 15.0% |
!!! | TCAGTATTGATTTTATAATT+GGG | - | chr2_3:48427483-48427502 | Msa0295740:CDS | 15.0% |
!!! | TTTATAAACTTCGTTTTTAA+TGG | - | chr2_3:48427821-48427840 | Msa0295740:intron | 15.0% |
!!! | TTATAAACTTCGTTTTTAAT+GGG | - | chr2_3:48427822-48427841 | Msa0295740:intron | 15.0% |
!!! | CATTTAAAATGAACAATTTA+GGG | - | chr2_3:48427909-48427928 | Msa0295740:intron | 15.0% |
!!! | TAAATACAATTTTAGTTTTG+TGG | + | chr2_3:48428247-48428266 | None:intergenic | 15.0% |
!! | GTTTAACAACAAAAATAATT+TGG | + | chr2_3:48428320-48428339 | None:intergenic | 15.0% |
!!! | ATCTAATTCAATTTTTAGTA+GGG | + | chr2_3:48429136-48429155 | None:intergenic | 15.0% |
!!! | AATCTAATTCAATTTTTAGT+AGG | + | chr2_3:48429137-48429156 | None:intergenic | 15.0% |
!! | TAATTAGCAAAGAAAAAAAA+CGG | + | chr2_3:48429346-48429365 | None:intergenic | 15.0% |
!! | AATACAATTTATCATACAAA+TGG | + | chr2_3:48430135-48430154 | None:intergenic | 15.0% |
!!! | AGTATTAAGTTTAGTTTAGA+TGG | - | chr2_3:48426910-48426929 | Msa0295740:CDS | 20.0% |
!!! | GTATTAAGTTTAGTTTAGAT+GGG | - | chr2_3:48426911-48426930 | Msa0295740:CDS | 20.0% |
!! | ATTTACTATTCACTCTTATA+TGG | - | chr2_3:48427354-48427373 | Msa0295740:intron | 20.0% |
!!! | CTCAGTATTGATTTTATAAT+TGG | - | chr2_3:48427482-48427501 | Msa0295740:CDS | 20.0% |
!! | GTACATTTAACTGTTAAAAT+TGG | - | chr2_3:48427573-48427592 | Msa0295740:intron | 20.0% |
!!! | AAAATGGTTTATTTTTCCAA+CGG | - | chr2_3:48427848-48427867 | Msa0295740:intron | 20.0% |
!!! | GCATTTAAAATGAACAATTT+AGG | - | chr2_3:48427908-48427927 | Msa0295740:intron | 20.0% |
!! | AAATTAACTTCTGATTAAGT+AGG | - | chr2_3:48428203-48428222 | Msa0295740:intron | 20.0% |
!!! | AATTTTAGTTTTGTGGTAAA+AGG | + | chr2_3:48428240-48428259 | None:intergenic | 20.0% |
!! | AGACAAAAGTTATTTGTAAT+TGG | - | chr2_3:48428363-48428382 | Msa0295740:intron | 20.0% |
!! | GAAACCATATTTAACATAAA+AGG | - | chr2_3:48428407-48428426 | Msa0295740:intron | 20.0% |
!!! | CAAACCTTTTATGTTAAATA+TGG | + | chr2_3:48428414-48428433 | None:intergenic | 20.0% |
!! | CATATTTAACATAAAAGGTT+TGG | - | chr2_3:48428412-48428431 | Msa0295740:intron | 20.0% |
!!! | TGAATTTTGAATAGATTCTT+TGG | - | chr2_3:48428681-48428700 | Msa0295740:intron | 20.0% |
!!! | GAATTTTGAATAGATTCTTT+GGG | - | chr2_3:48428682-48428701 | Msa0295740:intron | 20.0% |
!!! | AAAAACACATAAAAAGTACA+CGG | + | chr2_3:48429091-48429110 | None:intergenic | 20.0% |
!!! | TGTCATTTATATAATACATC+TGG | - | chr2_3:48429676-48429695 | Msa0295740:CDS | 20.0% |
!!! | ATTAGAACTTTCCAAAATTT+TGG | - | chr2_3:48430764-48430783 | Msa0295740:five_prime_UTR | 20.0% |
!!! | TCTGATCAAGTTTTTTAGAA+TGG | + | chr2_3:48425678-48425697 | None:intergenic | 25.0% |
! | AATGCGATGAAATTGAAAAA+GGG | - | chr2_3:48426362-48426381 | Msa0295740:intron | 25.0% |
!!! | GTATTGATTTTATAATTGGG+TGG | - | chr2_3:48427486-48427505 | Msa0295740:CDS | 25.0% |
! | AAATGTACTCTTATACAACT+TGG | + | chr2_3:48427601-48427620 | None:intergenic | 25.0% |
! | TTAGTTATTAGAGTACATAC+AGG | - | chr2_3:48427649-48427668 | Msa0295740:intron | 25.0% |
! | TTAAAATGAACAATTTAGGG+AGG | - | chr2_3:48427912-48427931 | Msa0295740:intron | 25.0% |
!! | GTTTGATATTTTCTTTGACA+AGG | - | chr2_3:48427981-48428000 | Msa0295740:intron | 25.0% |
! | ATATGTTGATGTCTTTACAA+TGG | - | chr2_3:48428157-48428176 | Msa0295740:intron | 25.0% |
! | AATCAGTTCAAAACTTTCAA+AGG | + | chr2_3:48428461-48428480 | None:intergenic | 25.0% |
! | CAATAAGGTATGAATCAAAT+AGG | + | chr2_3:48428557-48428576 | None:intergenic | 25.0% |
! | TGATTCATACCTTATTGTTA+TGG | - | chr2_3:48428560-48428579 | Msa0295740:intron | 25.0% |
!!! | CAAATTTTAATAACTACCAG+AGG | + | chr2_3:48428612-48428631 | None:intergenic | 25.0% |
!! | AAAACACATAAAAAGTACAC+GGG | + | chr2_3:48429090-48429109 | None:intergenic | 25.0% |
! | AACTATATCTTGAATCAGAT+TGG | + | chr2_3:48429181-48429200 | None:intergenic | 25.0% |
! | GAGTTCTTTAATATCCTATA+GGG | - | chr2_3:48429276-48429295 | Msa0295740:CDS | 25.0% |
! | TCAAATCACAAGAAAATTAC+TGG | - | chr2_3:48429863-48429882 | Msa0295740:CDS | 25.0% |
! | CAGTAAATCATTAAATTACC+TGG | + | chr2_3:48429892-48429911 | None:intergenic | 25.0% |
! | CAGGTAATTTAATGATTTAC+TGG | - | chr2_3:48429890-48429909 | Msa0295740:CDS | 25.0% |
! | AATCATAAGCATCATAACTT+TGG | + | chr2_3:48429928-48429947 | None:intergenic | 25.0% |
!! | ATTTTTCCAGATGTATACAT+GGG | + | chr2_3:48430291-48430310 | None:intergenic | 25.0% |
! | TTTACAGTGAAAATGTTCAT+AGG | + | chr2_3:48430363-48430382 | None:intergenic | 25.0% |
! | ATAGTCATACACATATTCTA+TGG | + | chr2_3:48430813-48430832 | None:intergenic | 25.0% |
AATGAGTTAAGGTTTGTGTA+TGG | + | chr2_3:48425582-48425601 | None:intergenic | 30.0% | |
TGTGAAGAATGAATGAGTTA+AGG | + | chr2_3:48425593-48425612 | None:intergenic | 30.0% | |
TTTGAGAGAGATTTAAGAGA+GGG | + | chr2_3:48425622-48425641 | None:intergenic | 30.0% | |
ATTTGAGAGAGATTTAAGAG+AGG | + | chr2_3:48425623-48425642 | None:intergenic | 30.0% | |
!!! | GATCAAGTTTTTTAGAATGG+AGG | + | chr2_3:48425675-48425694 | None:intergenic | 30.0% |
!!! | AAGGGCATTTTCATTGAAAT+GGG | - | chr2_3:48425735-48425754 | Msa0295740:CDS | 30.0% |
TCTTCTTGAGAAATGAGAAT+GGG | + | chr2_3:48425812-48425831 | None:intergenic | 30.0% | |
ATTCGTAGAAGAAATCTTGT+TGG | + | chr2_3:48425871-48425890 | None:intergenic | 30.0% | |
!!! | TGTTGTTGTTGTTGTTTTCT+TGG | + | chr2_3:48425967-48425986 | None:intergenic | 30.0% |
AGTAGAAGAAGAGATAAAAC+AGG | + | chr2_3:48426197-48426216 | None:intergenic | 30.0% | |
AATGTAAATAGTACTGTTCC+CGG | - | chr2_3:48426220-48426239 | Msa0295740:CDS | 30.0% | |
! | TCTTCTAGAAGAATTCTTTC+CGG | + | chr2_3:48426278-48426297 | None:intergenic | 30.0% |
GAATGCGATGAAATTGAAAA+AGG | - | chr2_3:48426361-48426380 | Msa0295740:intron | 30.0% | |
ATGCGATGAAATTGAAAAAG+GGG | - | chr2_3:48426363-48426382 | Msa0295740:intron | 30.0% | |
ACCATAAGAGATCTTGATAA+TGG | - | chr2_3:48426400-48426419 | Msa0295740:CDS | 30.0% | |
TCCATTATCAAGATCTCTTA+TGG | + | chr2_3:48426404-48426423 | None:intergenic | 30.0% | |
!! | AAGCTCATAATGGATCAATT+TGG | - | chr2_3:48426887-48426906 | Msa0295740:intron | 30.0% |
ATCATGCAAATGACCTTTAA+AGG | + | chr2_3:48427223-48427242 | None:intergenic | 30.0% | |
!!! | TTAGCTTCTGTTTTTTGGAT+AGG | - | chr2_3:48427274-48427293 | Msa0295740:intron | 30.0% |
!! | TTGGATAGGTCTTTTTGTTT+TGG | - | chr2_3:48427288-48427307 | Msa0295740:intron | 30.0% |
ATGTACACTTATATGCAACT+TGG | + | chr2_3:48427559-48427578 | None:intergenic | 30.0% | |
AAATTTGAGTCTGATTGAGT+AGG | + | chr2_3:48427798-48427817 | None:intergenic | 30.0% | |
!! | CGTTTTTAATGGGTCTAAAA+TGG | - | chr2_3:48427832-48427851 | Msa0295740:intron | 30.0% |
! | TTTTCTTTGACAAGGAAACA+TGG | - | chr2_3:48427989-48428008 | Msa0295740:intron | 30.0% |
AAGATGTCTGTTGAATAAAG+CGG | - | chr2_3:48428071-48428090 | Msa0295740:intron | 30.0% | |
AATAAAGCGGTAACTTACTT+AGG | - | chr2_3:48428084-48428103 | Msa0295740:intron | 30.0% | |
TAGGATGGTTATTTGTAACT+TGG | - | chr2_3:48428103-48428122 | Msa0295740:intron | 30.0% | |
AGGATGGTTATTTGTAACTT+GGG | - | chr2_3:48428104-48428123 | Msa0295740:intron | 30.0% | |
!!! | TTAGTTTTGTGGTAAAAGGA+TGG | + | chr2_3:48428236-48428255 | None:intergenic | 30.0% |
AGAGGATGTTTATGTAAACT+AGG | - | chr2_3:48428520-48428539 | Msa0295740:intron | 30.0% | |
TGCGAAGTATAAACATTACA+AGG | + | chr2_3:48428854-48428873 | None:intergenic | 30.0% | |
!!! | ATTTTTTCACACAGTGACTA+TGG | - | chr2_3:48428953-48428972 | Msa0295740:intron | 30.0% |
TATATACATGCACATTAGAG+TGG | + | chr2_3:48429057-48429076 | None:intergenic | 30.0% | |
!!! | TTCAATTTTTAGTAGGGAAG+AGG | + | chr2_3:48429130-48429149 | None:intergenic | 30.0% |
ATCTTGAATCAGATTGGATA+GGG | + | chr2_3:48429175-48429194 | None:intergenic | 30.0% | |
TATCTTGAATCAGATTGGAT+AGG | + | chr2_3:48429176-48429195 | None:intergenic | 30.0% | |
TATTTGTCTTCACTGCATAT+AGG | - | chr2_3:48429240-48429259 | Msa0295740:CDS | 30.0% | |
GGAGTTCTTTAATATCCTAT+AGG | - | chr2_3:48429275-48429294 | Msa0295740:CDS | 30.0% | |
TTCTTTAATATCCTATAGGG+TGG | - | chr2_3:48429279-48429298 | Msa0295740:CDS | 30.0% | |
TAGCAAAGAAAAAAAACGGA+GGG | + | chr2_3:48429342-48429361 | None:intergenic | 30.0% | |
TTAGCAAAGAAAAAAAACGG+AGG | + | chr2_3:48429343-48429362 | None:intergenic | 30.0% | |
AAGCAGATAGAAACGAAAAA+AGG | + | chr2_3:48429371-48429390 | None:intergenic | 30.0% | |
TATCATCAACAGGATTAAAC+TGG | + | chr2_3:48429418-48429437 | None:intergenic | 30.0% | |
! | ATGAAGTATCTATCATCAAC+AGG | + | chr2_3:48429428-48429447 | None:intergenic | 30.0% |
GATGATAGATACTTCATTAG+TGG | - | chr2_3:48429431-48429450 | Msa0295740:CDS | 30.0% | |
! | ATACTTCATTAGTGGATCTT+TGG | - | chr2_3:48429439-48429458 | Msa0295740:CDS | 30.0% |
!! | TGAATTTCTGAAGTCTGAAA+TGG | + | chr2_3:48429589-48429608 | None:intergenic | 30.0% |
TTAGTTAAATTGTCTGTGCA+GGG | - | chr2_3:48429625-48429644 | Msa0295740:CDS | 30.0% | |
ATACTCTATTCTGACAATTG+TGG | - | chr2_3:48429751-48429770 | Msa0295740:CDS | 30.0% | |
AAAAACAAGATGTTAACCAG+TGG | + | chr2_3:48429777-48429796 | None:intergenic | 30.0% | |
! | GATCTGGTTCATAAGTTTAA+AGG | - | chr2_3:48430047-48430066 | Msa0295740:CDS | 30.0% |
!! | ATATTTACCATTTGCTGTGA+GGG | + | chr2_3:48430246-48430265 | None:intergenic | 30.0% |
!! | TATATTTACCATTTGCTGTG+AGG | + | chr2_3:48430247-48430266 | None:intergenic | 30.0% |
! | CATTTTTCCAGATGTATACA+TGG | + | chr2_3:48430292-48430311 | None:intergenic | 30.0% |
TCAGTATGGATTTCACAAAT+GGG | - | chr2_3:48430681-48430700 | Msa0295740:five_prime_UTR | 30.0% | |
!!! | AGGATTTTGAGATCCAATTG+GGG | + | chr2_3:48425655-48425674 | None:intergenic | 35.0% |
!!! | GAGGATTTTGAGATCCAATT+GGG | + | chr2_3:48425656-48425675 | None:intergenic | 35.0% |
!!! | GAAGGGCATTTTCATTGAAA+TGG | - | chr2_3:48425734-48425753 | Msa0295740:CDS | 35.0% |
TTGAGATTGAGATTGGGATT+GGG | + | chr2_3:48425765-48425784 | None:intergenic | 35.0% | |
!!! | GGTTTGTTCATGGTTTTAAG+GGG | + | chr2_3:48425791-48425810 | None:intergenic | 35.0% |
!!! | GGGTTTGTTCATGGTTTTAA+GGG | + | chr2_3:48425792-48425811 | None:intergenic | 35.0% |
!! | TGGGTTTGTTCATGGTTTTA+AGG | + | chr2_3:48425793-48425812 | None:intergenic | 35.0% |
! | AATGAGAATGGGTTTGTTCA+TGG | + | chr2_3:48425801-48425820 | None:intergenic | 35.0% |
GTCTTCTTGAGAAATGAGAA+TGG | + | chr2_3:48425813-48425832 | None:intergenic | 35.0% | |
! | AATCTTGTTGGTCTAGTTGT+TGG | + | chr2_3:48425859-48425878 | None:intergenic | 35.0% |
CCATATGTCGTAACTGTTAA+GGG | + | chr2_3:48426011-48426030 | None:intergenic | 35.0% | |
TCCATATGTCGTAACTGTTA+AGG | + | chr2_3:48426012-48426031 | None:intergenic | 35.0% | |
ACTCGTCTTCTTCAAACTAT+TGG | - | chr2_3:48426064-48426083 | Msa0295740:CDS | 35.0% | |
ATATTCCGATCCAAATCTGA+CGG | - | chr2_3:48426142-48426161 | Msa0295740:CDS | 35.0% | |
! | TCTTCTAGAAGAAGTCATTC+CGG | - | chr2_3:48426286-48426305 | Msa0295740:intron | 35.0% |
GTGAAAGAAGTTAGAGAAGA+TGG | - | chr2_3:48426436-48426455 | Msa0295740:CDS | 35.0% | |
AAGTTAGAGAAGATGGAATG+TGG | - | chr2_3:48426443-48426462 | Msa0295740:CDS | 35.0% | |
TGGAATGTGGAATAAAGTGA+AGG | - | chr2_3:48426456-48426475 | Msa0295740:CDS | 35.0% | |
AATGTGGAATAAAGTGAAGG+AGG | - | chr2_3:48426459-48426478 | Msa0295740:CDS | 35.0% | |
! | TATGGAGGAATTTGAGATGA+CGG | - | chr2_3:48426504-48426523 | Msa0295740:intron | 35.0% |
CAAGAGATTCAAGCTCATAA+TGG | - | chr2_3:48426877-48426896 | Msa0295740:intron | 35.0% | |
AGGATTGTGTGATTCATGTT+TGG | - | chr2_3:48426956-48426975 | Msa0295740:CDS | 35.0% | |
! | ATGACCTTTAAAGGAGCAAA+CGG | + | chr2_3:48427214-48427233 | None:intergenic | 35.0% |
!!! | TCAGGTTAGCTTCTGTTTTT+TGG | - | chr2_3:48427269-48427288 | Msa0295740:intron | 35.0% |
!!! | CATCGTTGGCTTTTGTTAAA+AGG | - | chr2_3:48427377-48427396 | Msa0295740:intron | 35.0% |
AAGCCAATTCATCAGTTCAT+CGG | + | chr2_3:48427417-48427436 | None:intergenic | 35.0% | |
!! | AGTTTTAGTGACTCTCCTTT+CGG | - | chr2_3:48427681-48427700 | Msa0295740:intron | 35.0% |
AGTCTTAAAAACCTGTACTG+TGG | - | chr2_3:48427716-48427735 | Msa0295740:intron | 35.0% | |
GTCTTAAAAACCTGTACTGT+GGG | - | chr2_3:48427717-48427736 | Msa0295740:intron | 35.0% | |
TGTCACAGTGAAAAGATTTC+TGG | - | chr2_3:48427756-48427775 | Msa0295740:intron | 35.0% | |
GGATGGTTATTTGTAACTTG+GGG | - | chr2_3:48428105-48428124 | Msa0295740:intron | 35.0% | |
! | TCAAACACATTTGTTGAGCT+GGG | + | chr2_3:48428274-48428293 | None:intergenic | 35.0% |
! | TTCAAACACATTTGTTGAGC+TGG | + | chr2_3:48428275-48428294 | None:intergenic | 35.0% |
TCGTAACATTGAATGTGAAG+TGG | + | chr2_3:48428342-48428361 | None:intergenic | 35.0% | |
AGGTTTGGATCCTATTAAAG+AGG | - | chr2_3:48428427-48428446 | Msa0295740:intron | 35.0% | |
GGTTTGGATCCTATTAAAGA+GGG | - | chr2_3:48428428-48428447 | Msa0295740:intron | 35.0% | |
GTTTGGATCCTATTAAAGAG+GGG | - | chr2_3:48428429-48428448 | Msa0295740:intron | 35.0% | |
!!! | GGTTTTTTCCCCTCTTTAAT+AGG | + | chr2_3:48428440-48428459 | None:intergenic | 35.0% |
TCTCCAATGTAAACTAAAGG+GGG | + | chr2_3:48428503-48428522 | None:intergenic | 35.0% | |
CTCTCCAATGTAAACTAAAG+GGG | + | chr2_3:48428504-48428523 | None:intergenic | 35.0% | |
CCTCTCCAATGTAAACTAAA+GGG | + | chr2_3:48428505-48428524 | None:intergenic | 35.0% | |
TCCTCTCCAATGTAAACTAA+AGG | + | chr2_3:48428506-48428525 | None:intergenic | 35.0% | |
CCTTATTGTTATGGTAACAC+CGG | - | chr2_3:48428569-48428588 | Msa0295740:intron | 35.0% | |
TTTGAATAGATTCTTTGGGC+AGG | - | chr2_3:48428686-48428705 | Msa0295740:intron | 35.0% | |
TTGAATAGATTCTTTGGGCA+GGG | - | chr2_3:48428687-48428706 | Msa0295740:intron | 35.0% | |
TACAAGGATGATCTAAACAC+TGG | + | chr2_3:48428838-48428857 | None:intergenic | 35.0% | |
GCATATAGGACAAGTTATAC+AGG | - | chr2_3:48429254-48429273 | Msa0295740:CDS | 35.0% | |
CCTAAATTTAACCACCCTAT+AGG | + | chr2_3:48429293-48429312 | None:intergenic | 35.0% | |
CCTATAGGGTGGTTAAATTT+AGG | - | chr2_3:48429290-48429309 | Msa0295740:CDS | 35.0% | |
CTTAGTTAAATTGTCTGTGC+AGG | - | chr2_3:48429624-48429643 | Msa0295740:CDS | 35.0% | |
!! | CAAGAAAATTACTGGTTTCC+AGG | - | chr2_3:48429871-48429890 | Msa0295740:CDS | 35.0% |
AACTGATGTAAGTTTCTTGC+AGG | - | chr2_3:48430188-48430207 | Msa0295740:CDS | 35.0% | |
ATATATTGTTGCTGCAAGTG+AGG | - | chr2_3:48430262-48430281 | Msa0295740:CDS | 35.0% | |
! | GACATGCATGATACATTTTC+TGG | - | chr2_3:48430428-48430447 | Msa0295740:CDS | 35.0% |
TCGATAGAATTTCTGCAACA+TGG | - | chr2_3:48430612-48430631 | Msa0295740:CDS | 35.0% | |
! | GCTAGAAGAAGTTTTTCTTC+CGG | + | chr2_3:48430638-48430657 | None:intergenic | 35.0% |
GTCAGTATGGATTTCACAAA+TGG | - | chr2_3:48430680-48430699 | Msa0295740:five_prime_UTR | 35.0% | |
CAGTATGGATTTCACAAATG+GGG | - | chr2_3:48430682-48430701 | Msa0295740:five_prime_UTR | 35.0% | |
TAAGTCAAAAAATGTCAGCC+TGG | - | chr2_3:48430705-48430724 | Msa0295740:five_prime_UTR | 35.0% | |
AAGTCAAAAAATGTCAGCCT+GGG | - | chr2_3:48430706-48430725 | Msa0295740:five_prime_UTR | 35.0% | |
! | GAAGTGGCAATCCAAAATTT+TGG | + | chr2_3:48430778-48430797 | None:intergenic | 35.0% |
ATGGTCTCTTATATTCGAAG+TGG | + | chr2_3:48430794-48430813 | None:intergenic | 35.0% | |
TGTATGACTATATGTCACAG+CGG | - | chr2_3:48430822-48430841 | Msa0295740:five_prime_UTR | 35.0% | |
GTTTGTGTATGGTGAGAGAT+TGG | + | chr2_3:48425571-48425590 | None:intergenic | 40.0% | |
AAATTTCACACTCCCCCAAT+TGG | - | chr2_3:48425639-48425658 | Msa0295740:intron | 40.0% | |
!!! | GGATTTTGAGATCCAATTGG+GGG | + | chr2_3:48425654-48425673 | None:intergenic | 40.0% |
!!! | GGAGGATTTTGAGATCCAAT+TGG | + | chr2_3:48425657-48425676 | None:intergenic | 40.0% |
AACCACACTAACATTTGCTC+AGG | - | chr2_3:48425711-48425730 | Msa0295740:CDS | 40.0% | |
ACCACACTAACATTTGCTCA+GGG | - | chr2_3:48425712-48425731 | Msa0295740:CDS | 40.0% | |
ACTAACATTTGCTCAGGGAA+GGG | - | chr2_3:48425717-48425736 | Msa0295740:CDS | 40.0% | |
GTTGAGATTGAGATTGGGAT+TGG | + | chr2_3:48425766-48425785 | None:intergenic | 40.0% | |
GGGTTGTTGAGATTGAGATT+GGG | + | chr2_3:48425771-48425790 | None:intergenic | 40.0% | |
! | GTTGATGTTGTTGTTGGAGT+TGG | + | chr2_3:48425835-48425854 | None:intergenic | 40.0% |
!! | GTTGGTGTTGATGTTGTTGT+TGG | + | chr2_3:48425841-48425860 | None:intergenic | 40.0% |
AAGAGGAGAGAGAGAGTAAA+CGG | + | chr2_3:48425901-48425920 | None:intergenic | 40.0% | |
! | TTTCTTGGTCTTCGTCTTCT+TGG | + | chr2_3:48425952-48425971 | None:intergenic | 40.0% |
CCCTTAACAGTTACGACATA+TGG | - | chr2_3:48426008-48426027 | Msa0295740:CDS | 40.0% | |
GGAATATGGCATTGTAAGGT+GGG | + | chr2_3:48426129-48426148 | None:intergenic | 40.0% | |
GATCGGAATATGGCATTGTA+AGG | + | chr2_3:48426133-48426152 | None:intergenic | 40.0% | |
GTCAGATTTGGATCGGAATA+TGG | + | chr2_3:48426143-48426162 | None:intergenic | 40.0% | |
TATGACCGTCAGATTTGGAT+CGG | + | chr2_3:48426150-48426169 | None:intergenic | 40.0% | |
GTTGTTATGACCGTCAGATT+TGG | + | chr2_3:48426155-48426174 | None:intergenic | 40.0% | |
CTAGAAGAATTCTTTCCGGA+CGG | + | chr2_3:48426274-48426293 | None:intergenic | 40.0% | |
TGGAATAAAGTGAAGGAGGT+TGG | - | chr2_3:48426463-48426482 | Msa0295740:intron | 40.0% | |
GGAAATGGGAGTAATGGTAA+TGG | - | chr2_3:48426607-48426626 | Msa0295740:CDS | 40.0% | |
!! | AATGGGAGTAATGGTAATGG+AGG | - | chr2_3:48426610-48426629 | Msa0295740:CDS | 40.0% |
!! | TGGTAATGGAGGTTGTTCTA+AGG | - | chr2_3:48426621-48426640 | Msa0295740:CDS | 40.0% |
!! | GGTAATGGAGGTTGTTCTAA+GGG | - | chr2_3:48426622-48426641 | Msa0295740:CDS | 40.0% |
! | GTAATGGAGGTTGTTCTAAG+GGG | - | chr2_3:48426623-48426642 | Msa0295740:CDS | 40.0% |
!! | TGTTCTAAGGGGAAGAAGAA+AGG | - | chr2_3:48426634-48426653 | Msa0295740:intron | 40.0% |
!! | CAAGAGTGTTGCTAGTTCAA+TGG | - | chr2_3:48426678-48426697 | Msa0295740:intron | 40.0% |
TGATGAGAGAGATACTTCGT+CGG | - | chr2_3:48426726-48426745 | Msa0295740:intron | 40.0% | |
CTACGGATGATAGTCAAGAT+GGG | - | chr2_3:48426776-48426795 | Msa0295740:CDS | 40.0% | |
AGTCAAGATGGGTCATTTCA+TGG | - | chr2_3:48426787-48426806 | Msa0295740:CDS | 40.0% | |
TTGTGTGATTCATGTTTGGC+AGG | - | chr2_3:48426960-48426979 | Msa0295740:CDS | 40.0% | |
! | GTTGTTGCTTATGGAGAAAC+AGG | - | chr2_3:48427008-48427027 | Msa0295740:CDS | 40.0% |
! | ATTTCTTGTTAATGGGTCGC+CGG | - | chr2_3:48427053-48427072 | Msa0295740:intron | 40.0% |
ACTCAACGACTTCCTACTAA+CGG | + | chr2_3:48427142-48427161 | None:intergenic | 40.0% | |
TAGTAGGAAGTCGTTGAGTT+TGG | - | chr2_3:48427143-48427162 | Msa0295740:intron | 40.0% | |
AGTGAGTGCAAACACATGTT+CGG | + | chr2_3:48427184-48427203 | None:intergenic | 40.0% | |
AAACCCGTTTGCTCCTTTAA+AGG | - | chr2_3:48427207-48427226 | Msa0295740:intron | 40.0% | |
! | TGACCTTTAAAGGAGCAAAC+GGG | + | chr2_3:48427213-48427232 | None:intergenic | 40.0% |
TCACTCTTATATGGCATCGT+TGG | - | chr2_3:48427363-48427382 | Msa0295740:intron | 40.0% | |
TGACCGATGAACTGATGAAT+TGG | - | chr2_3:48427411-48427430 | Msa0295740:intron | 40.0% | |
!! | TGGGTGGAATTGTTTTCAAG+TGG | - | chr2_3:48427502-48427521 | Msa0295740:CDS | 40.0% |
!!! | TTGTTTTCAAGTGGCTGAAC+AGG | - | chr2_3:48427511-48427530 | Msa0295740:CDS | 40.0% |
ACTGCAATAATGCAACCGAA+AGG | + | chr2_3:48427699-48427718 | None:intergenic | 40.0% | |
TTGTGATTCTAGGCCTTTCT+TGG | - | chr2_3:48427878-48427897 | Msa0295740:intron | 40.0% | |
AAATGCCGTCTTTCCAAGAA+AGG | + | chr2_3:48427894-48427913 | None:intergenic | 40.0% | |
TGCTTTAGTGAACTGTGATG+TGG | - | chr2_3:48428041-48428060 | Msa0295740:intron | 40.0% | |
AAGCGGTAACTTACTTAGGA+TGG | - | chr2_3:48428088-48428107 | Msa0295740:intron | 40.0% | |
TGGTTATTTGTAACTTGGGG+TGG | - | chr2_3:48428108-48428127 | Msa0295740:intron | 40.0% | |
GGTTATTTGTAACTTGGGGT+GGG | - | chr2_3:48428109-48428128 | Msa0295740:intron | 40.0% | |
GTTATTTGTAACTTGGGGTG+GGG | - | chr2_3:48428110-48428129 | Msa0295740:intron | 40.0% | |
! | CAAACACATTTGTTGAGCTG+GGG | + | chr2_3:48428273-48428292 | None:intergenic | 40.0% |
GTAAACTAAAGGGGGAAGTT+TGG | + | chr2_3:48428495-48428514 | None:intergenic | 40.0% | |
! | CTTCCCCCTTTAGTTTACAT+TGG | - | chr2_3:48428497-48428516 | Msa0295740:intron | 40.0% |
! | CCCTTTAGTTTACATTGGAG+AGG | - | chr2_3:48428502-48428521 | Msa0295740:intron | 40.0% |
!! | CCGGTGTTACCATAACAATA+AGG | + | chr2_3:48428572-48428591 | None:intergenic | 40.0% |
TATTGTTATGGTAACACCGG+TGG | - | chr2_3:48428572-48428591 | Msa0295740:intron | 40.0% | |
ATTGTTATGGTAACACCGGT+GGG | - | chr2_3:48428573-48428592 | Msa0295740:intron | 40.0% | |
TGAATAGATTCTTTGGGCAG+GGG | - | chr2_3:48428688-48428707 | Msa0295740:intron | 40.0% | |
CTTCAATGGACAAAACAGTG+CGG | - | chr2_3:48428897-48428916 | Msa0295740:intron | 40.0% | |
ATGACTGCAACTCAGGTTTA+GGG | + | chr2_3:48429029-48429048 | None:intergenic | 40.0% | |
GAATCAGATTGGATAGGGAT+AGG | + | chr2_3:48429170-48429189 | None:intergenic | 40.0% | |
! | TTTGAGACCAATTATGCGCA+AGG | - | chr2_3:48429201-48429220 | Msa0295740:CDS | 40.0% |
AATTGTGCCTTGCGCATAAT+TGG | + | chr2_3:48429211-48429230 | None:intergenic | 40.0% | |
AAAAAAAACGGAGGGAACGA+GGG | + | chr2_3:48429334-48429353 | None:intergenic | 40.0% | |
GTTTCTATCTGCTTTCTGTC+TGG | - | chr2_3:48429377-48429396 | Msa0295740:CDS | 40.0% | |
! | TAGTGGATCTTTGGATGCTA+AGG | - | chr2_3:48429448-48429467 | Msa0295740:CDS | 40.0% |
CAATCAACAACTTGTCGATC+CGG | + | chr2_3:48429491-48429510 | None:intergenic | 40.0% | |
TTGGATCGATCTTCATGAGA+TGG | - | chr2_3:48429508-48429527 | Msa0295740:CDS | 40.0% | |
TTGTTATACACCTGATGGTC+AGG | - | chr2_3:48429541-48429560 | Msa0295740:CDS | 40.0% | |
! | TGCACTAGTTGGTTCATACA+AGG | - | chr2_3:48429648-48429667 | Msa0295740:CDS | 40.0% |
! | GCACTAGTTGGTTCATACAA+GGG | - | chr2_3:48429649-48429668 | Msa0295740:CDS | 40.0% |
AATACATCTGGTACTGTCAG+AGG | - | chr2_3:48429688-48429707 | Msa0295740:CDS | 40.0% | |
! | TTTTATGAACAGTTTGCCCC+AGG | - | chr2_3:48429963-48429982 | Msa0295740:CDS | 40.0% |
TACTTCTGATGAACTTCCTG+GGG | + | chr2_3:48429982-48430001 | None:intergenic | 40.0% | |
GTACTTCTGATGAACTTCCT+GGG | + | chr2_3:48429983-48430002 | None:intergenic | 40.0% | |
AGTACTTCTGATGAACTTCC+TGG | + | chr2_3:48429984-48430003 | None:intergenic | 40.0% | |
!! | CATCTGCTGATTCTCGAATA+CGG | - | chr2_3:48430009-48430028 | Msa0295740:CDS | 40.0% |
!! | ATCTGCTGATTCTCGAATAC+GGG | - | chr2_3:48430010-48430029 | Msa0295740:CDS | 40.0% |
!! | GGTTGTTGATGGTATTGATC+TGG | - | chr2_3:48430031-48430050 | Msa0295740:CDS | 40.0% |
TCAGTTTGATCAGCACGAAT+TGG | + | chr2_3:48430174-48430193 | None:intergenic | 40.0% | |
AGGATTCCCATGTATACATC+TGG | - | chr2_3:48430282-48430301 | Msa0295740:CDS | 40.0% | |
GTGACACCTTTACTTCTGTT+GGG | + | chr2_3:48430329-48430348 | None:intergenic | 40.0% | |
ATGTTCATAGGACTGTGTCA+CGG | + | chr2_3:48430351-48430370 | None:intergenic | 40.0% | |
! | AAGTTTTCCTCTACAGGTGT+AGG | + | chr2_3:48430509-48430528 | None:intergenic | 40.0% |
ACACCTGTAGAGGAAAACTT+CGG | - | chr2_3:48430509-48430528 | Msa0295740:CDS | 40.0% | |
TAGAATTTCTGCAACATGGC+CGG | - | chr2_3:48430616-48430635 | Msa0295740:CDS | 40.0% | |
TGAAATCCATACTGACACGA+GGG | + | chr2_3:48430676-48430695 | None:intergenic | 40.0% | |
AGTCAAAAAATGTCAGCCTG+GGG | - | chr2_3:48430707-48430726 | Msa0295740:five_prime_UTR | 40.0% | |
! | TTTTTGCCAGCTTATGGAGA+AGG | + | chr2_3:48430887-48430906 | None:intergenic | 40.0% |
! | TACAGGTTTTTGCCAGCTTA+TGG | + | chr2_3:48430893-48430912 | None:intergenic | 40.0% |
TCCCTGAGCAAATGTTAGTG+TGG | + | chr2_3:48425716-48425735 | None:intergenic | 45.0% | |
CACTAACATTTGCTCAGGGA+AGG | - | chr2_3:48425716-48425735 | Msa0295740:CDS | 45.0% | |
GGGGTTGTTGAGATTGAGAT+TGG | + | chr2_3:48425772-48425791 | None:intergenic | 45.0% | |
TTCTTGGTCAGAGTTGGAGT+TGG | + | chr2_3:48425936-48425955 | None:intergenic | 45.0% | |
TTCGTCTTCTTGGTCAGAGT+TGG | + | chr2_3:48425942-48425961 | None:intergenic | 45.0% | |
!! | ACGAGTACGACGTTCTGAAA+CGG | + | chr2_3:48426050-48426069 | None:intergenic | 45.0% |
ACCACGTGAAAGGGCAAAAT+CGG | + | chr2_3:48426098-48426117 | None:intergenic | 45.0% | |
GATTGGGTTACCACGTGAAA+GGG | + | chr2_3:48426107-48426126 | None:intergenic | 45.0% | |
TGGCATTGTAAGGTGGGATT+GGG | + | chr2_3:48426123-48426142 | None:intergenic | 45.0% | |
ATGGCATTGTAAGGTGGGAT+TGG | + | chr2_3:48426124-48426143 | None:intergenic | 45.0% | |
CGGAATATGGCATTGTAAGG+TGG | + | chr2_3:48426130-48426149 | None:intergenic | 45.0% | |
AGTACTGTTCCCGGTAATTC+TGG | - | chr2_3:48426229-48426248 | Msa0295740:intron | 45.0% | |
!! | TTCCGGTGTTGATTTCTTGC+CGG | - | chr2_3:48426303-48426322 | Msa0295740:intron | 45.0% |
GGCAAAGTAGAAGAATTCCC+CGG | + | chr2_3:48426325-48426344 | None:intergenic | 45.0% | |
GGGGAATTCTTCTACTTTGC+CGG | - | chr2_3:48426324-48426343 | Msa0295740:intron | 45.0% | |
TTCTTCTACTTTGCCGGACA+CGG | - | chr2_3:48426330-48426349 | Msa0295740:intron | 45.0% | |
CATTCTATTTCACCCGTGTC+CGG | + | chr2_3:48426346-48426365 | None:intergenic | 45.0% | |
!! | AAAGTGAAGGAGGTTGGTAC+TGG | - | chr2_3:48426469-48426488 | Msa0295740:intron | 45.0% |
!! | AAGTGAAGGAGGTTGGTACT+GGG | - | chr2_3:48426470-48426489 | Msa0295740:intron | 45.0% |
TACTGGGAGACAGTTGACTA+TGG | - | chr2_3:48426486-48426505 | Msa0295740:intron | 45.0% | |
! | GAGGAATTTGAGATGACGGT+TGG | - | chr2_3:48426508-48426527 | Msa0295740:intron | 45.0% |
! | GGTGTTGGAAATGGGAGTAA+TGG | - | chr2_3:48426601-48426620 | Msa0295740:CDS | 45.0% |
TCTAAGGGGAAGAAGAAAGG+AGG | - | chr2_3:48426637-48426656 | Msa0295740:intron | 45.0% | |
CTAAGGGGAAGAAGAAAGGA+GGG | - | chr2_3:48426638-48426657 | Msa0295740:intron | 45.0% | |
! | GAGTGTTGCTAGTTCAATGG+CGG | - | chr2_3:48426681-48426700 | Msa0295740:intron | 45.0% |
! | AGTGTTGCTAGTTCAATGGC+GGG | - | chr2_3:48426682-48426701 | Msa0295740:intron | 45.0% |
!! | TAGTTCAATGGCGGGTCATA+AGG | - | chr2_3:48426690-48426709 | Msa0295740:intron | 45.0% |
AGAGATACTTCGTCGGAGAA+AGG | - | chr2_3:48426733-48426752 | Msa0295740:intron | 45.0% | |
GCTACGGATGATAGTCAAGA+TGG | - | chr2_3:48426775-48426794 | Msa0295740:CDS | 45.0% | |
GTCATTTCATGGACCTGAGA+GGG | - | chr2_3:48426798-48426817 | Msa0295740:intron | 45.0% | |
AGGGTGAGAGTGAGACAATA+TGG | - | chr2_3:48426817-48426836 | Msa0295740:intron | 45.0% | |
GGGTGAGAGTGAGACAATAT+GGG | - | chr2_3:48426818-48426837 | Msa0295740:intron | 45.0% | |
GGGAAATATCTTGCTAGTGC+TGG | - | chr2_3:48426931-48426950 | Msa0295740:CDS | 45.0% | |
!! | ATATCTTGCTAGTGCTGGTG+AGG | - | chr2_3:48426936-48426955 | Msa0295740:CDS | 45.0% |
GATTCATGTTTGGCAGGTTG+TGG | - | chr2_3:48426966-48426985 | Msa0295740:CDS | 45.0% | |
TTGTGGAGTCTGAGAGGAAA+GGG | - | chr2_3:48426983-48427002 | Msa0295740:CDS | 45.0% | |
! | GAAAGGGGAGTTGTTGCTTA+TGG | - | chr2_3:48426999-48427018 | Msa0295740:CDS | 45.0% |
GTTGCTTATGGAGAAACAGG+AGG | - | chr2_3:48427011-48427030 | Msa0295740:CDS | 45.0% | |
! | TCCTTTGGCGGATAATCTTC+TGG | - | chr2_3:48427092-48427111 | Msa0295740:intron | 45.0% |
TCCAGAAGATTATCCGCCAA+AGG | + | chr2_3:48427096-48427115 | None:intergenic | 45.0% | |
! | TCTTCTGGAGAGGAAGAGAA+AGG | - | chr2_3:48427107-48427126 | Msa0295740:intron | 45.0% |
! | CTTCTGGAGAGGAAGAGAAA+GGG | - | chr2_3:48427108-48427127 | Msa0295740:intron | 45.0% |
! | TTCTGGAGAGGAAGAGAAAG+GGG | - | chr2_3:48427109-48427128 | Msa0295740:intron | 45.0% |
GTTGAGTTTGGACCAGTTTG+TGG | - | chr2_3:48427155-48427174 | Msa0295740:intron | 45.0% | |
GTGAGTGCAAACACATGTTC+GGG | + | chr2_3:48427183-48427202 | None:intergenic | 45.0% | |
ATGATGTGCTTGACCTCTCT+TGG | - | chr2_3:48427238-48427257 | Msa0295740:intron | 45.0% | |
! | GCTGAGTGTTTTCGATGACT+TGG | - | chr2_3:48427315-48427334 | Msa0295740:intron | 45.0% |
GAATCACAACGTAACTCCGT+TGG | + | chr2_3:48427867-48427886 | None:intergenic | 45.0% | |
CGGAGTTACGTTGTGATTCT+AGG | - | chr2_3:48427868-48427887 | Msa0295740:intron | 45.0% | |
CTAGGCCTTTCTTGGAAAGA+CGG | - | chr2_3:48427886-48427905 | Msa0295740:intron | 45.0% | |
GAGGCAACTTACACACAACA+TGG | - | chr2_3:48427931-48427950 | Msa0295740:intron | 45.0% | |
TTCTTTGGGCAGGGGTTTAT+TGG | - | chr2_3:48428696-48428715 | Msa0295740:intron | 45.0% | |
GCACTTGCTCTCATCTTCAA+TGG | - | chr2_3:48428883-48428902 | Msa0295740:intron | 45.0% | |
CATGACTGCAACTCAGGTTT+AGG | + | chr2_3:48429030-48429049 | None:intergenic | 45.0% | |
AACCTGAGTTGCAGTCATGT+AGG | - | chr2_3:48429031-48429050 | Msa0295740:intron | 45.0% | |
GAAAAAAAACGGAGGGAACG+AGG | + | chr2_3:48429335-48429354 | None:intergenic | 45.0% | |
TGGATGCTAAGGTTCGCATA+TGG | - | chr2_3:48429459-48429478 | Msa0295740:CDS | 45.0% | |
CGGATCGACAAGTTGTTGAT+TGG | - | chr2_3:48429489-48429508 | Msa0295740:CDS | 45.0% | |
!! | GCTGCTTGTTATACACCTGA+TGG | - | chr2_3:48429536-48429555 | Msa0295740:CDS | 45.0% |
TATACACCTGATGGTCAGGT+TGG | - | chr2_3:48429545-48429564 | Msa0295740:CDS | 45.0% | |
ATTCTGACAATTGTGGCCAC+TGG | - | chr2_3:48429758-48429777 | Msa0295740:CDS | 45.0% | |
! | TCTCGAATACGGGTTGTTGA+TGG | - | chr2_3:48430020-48430039 | Msa0295740:CDS | 45.0% |
!! | TTTACCATTTGCTGTGAGGG+AGG | + | chr2_3:48430243-48430262 | None:intergenic | 45.0% |
GGAAAAATGAAGCCGATTGC+AGG | - | chr2_3:48430303-48430322 | Msa0295740:CDS | 45.0% | |
GGTGACACCTTTACTTCTGT+TGG | + | chr2_3:48430330-48430349 | None:intergenic | 45.0% | |
GTCGTTGTTGCTATCAAGCT+CGG | + | chr2_3:48430462-48430481 | None:intergenic | 45.0% | |
TACAGGTGTAGGAGGATGAT+TGG | + | chr2_3:48430498-48430517 | None:intergenic | 45.0% | |
! | TTTTCCTCTACAGGTGTAGG+AGG | + | chr2_3:48430506-48430525 | None:intergenic | 45.0% |
! | ACACCGAAGTTTTCCTCTAC+AGG | + | chr2_3:48430515-48430534 | None:intergenic | 45.0% |
GTGAAATCCATACTGACACG+AGG | + | chr2_3:48430677-48430696 | None:intergenic | 45.0% | |
AAAAATGTCAGCCTGGGGTA+TGG | - | chr2_3:48430712-48430731 | Msa0295740:five_prime_UTR | 45.0% | |
AGTAACAATCACCATACCCC+AGG | + | chr2_3:48430726-48430745 | None:intergenic | 45.0% | |
GGTATGGTGATTGTTACTGC+TGG | - | chr2_3:48430728-48430747 | Msa0295740:five_prime_UTR | 45.0% | |
!! | ATTGTTACTGCTGGTCTTCG+AGG | - | chr2_3:48430737-48430756 | Msa0295740:five_prime_UTR | 45.0% |
!! | CGAGTTGATATCAGCTCAGA+AGG | - | chr2_3:48430849-48430868 | Msa0295740:five_prime_UTR | 45.0% |
AGATCACCTTCTCCATAAGC+TGG | - | chr2_3:48430878-48430897 | Msa0295740:five_prime_UTR | 45.0% | |
! | AGAGATTGGAGCGAGGTGTT+GGG | + | chr2_3:48425557-48425576 | None:intergenic | 50.0% |
TATGGTGAGAGATTGGAGCG+AGG | + | chr2_3:48425564-48425583 | None:intergenic | 50.0% | |
GTTGGAACAAGAGCAGGAAG+AGG | + | chr2_3:48425918-48425937 | None:intergenic | 50.0% | |
GTTGGAGTTGGAACAAGAGC+AGG | + | chr2_3:48425924-48425943 | None:intergenic | 50.0% | |
!! | CGACGTTCTGAAACGGAAGA+AGG | + | chr2_3:48426043-48426062 | None:intergenic | 50.0% |
! | TCCGATTTTGCCCTTTCACG+TGG | - | chr2_3:48426094-48426113 | Msa0295740:CDS | 50.0% |
GGATTGGGTTACCACGTGAA+AGG | + | chr2_3:48426108-48426127 | None:intergenic | 50.0% | |
ACTGTTCCCGGTAATTCTGG+CGG | - | chr2_3:48426232-48426251 | Msa0295740:intron | 50.0% | |
GAAGAATTCTTTCCGGACGG+AGG | + | chr2_3:48426271-48426290 | None:intergenic | 50.0% | |
!! | TCCGGTGTTGATTTCTTGCC+GGG | - | chr2_3:48426304-48426323 | Msa0295740:intron | 50.0% |
TCTTCTACTTTGCCGGACAC+GGG | - | chr2_3:48426331-48426350 | Msa0295740:intron | 50.0% | |
TGGGAGACAGTTGACTATGG+AGG | - | chr2_3:48426489-48426508 | Msa0295740:intron | 50.0% | |
TGGTCAATCTCCGATTGTGC+AGG | - | chr2_3:48426528-48426547 | Msa0295740:intron | 50.0% | |
CGCATAAGCTCCTGCACAAT+CGG | + | chr2_3:48426541-48426560 | None:intergenic | 50.0% | |
GGAAGAAGAAAGGAGGGAGT+TGG | - | chr2_3:48426644-48426663 | Msa0295740:intron | 50.0% | |
GATACTTCGTCGGAGAAAGG+CGG | - | chr2_3:48426736-48426755 | Msa0295740:intron | 50.0% | |
ATACTTCGTCGGAGAAAGGC+GGG | - | chr2_3:48426737-48426756 | Msa0295740:intron | 50.0% | |
GGTCATTTCATGGACCTGAG+AGG | - | chr2_3:48426797-48426816 | Msa0295740:intron | 50.0% | |
GTTGTGGAGTCTGAGAGGAA+AGG | - | chr2_3:48426982-48427001 | Msa0295740:CDS | 50.0% | |
TGTGGAGTCTGAGAGGAAAG+GGG | - | chr2_3:48426984-48427003 | Msa0295740:CDS | 50.0% | |
! | TGGCGGATAATCTTCTGGAG+AGG | - | chr2_3:48427097-48427116 | Msa0295740:intron | 50.0% |
CATGTTCGGGAACCACAAAC+TGG | + | chr2_3:48427170-48427189 | None:intergenic | 50.0% | |
CCTGAGACTTAGACCAAGAG+AGG | + | chr2_3:48427254-48427273 | None:intergenic | 50.0% | |
CCTCTCTTGGTCTAAGTCTC+AGG | - | chr2_3:48427251-48427270 | Msa0295740:intron | 50.0% | |
AAGTGGCTGAACAGGCATCA+AGG | - | chr2_3:48427519-48427538 | Msa0295740:CDS | 50.0% | |
AGTGGCTGAACAGGCATCAA+GGG | - | chr2_3:48427520-48427539 | Msa0295740:CDS | 50.0% | |
CCTACTTGTTCCCACAGTAC+AGG | + | chr2_3:48427730-48427749 | None:intergenic | 50.0% | |
CCTGTACTGTGGGAACAAGT+AGG | - | chr2_3:48427727-48427746 | Msa0295740:intron | 50.0% | |
! | GGTTCGCATATGGAGCATTC+CGG | - | chr2_3:48429469-48429488 | Msa0295740:CDS | 50.0% |
CTTGAACCAACCTGACCATC+AGG | + | chr2_3:48429554-48429573 | None:intergenic | 50.0% | |
!! | CTGATGGTCAGGTTGGTTCA+AGG | - | chr2_3:48429552-48429571 | Msa0295740:CDS | 50.0% |
ACTTCTGTTGGGCCTGCAAT+CGG | + | chr2_3:48430318-48430337 | None:intergenic | 50.0% | |
TGCAGGCCCAACAGAAGTAA+AGG | - | chr2_3:48430320-48430339 | Msa0295740:CDS | 50.0% | |
ATGTGTCAGTAGCCATTCCC+TGG | - | chr2_3:48430384-48430403 | Msa0295740:CDS | 50.0% | |
TCATCCTCCTACACCTGTAG+AGG | - | chr2_3:48430499-48430518 | Msa0295740:CDS | 50.0% | |
!! | AGAGGAAAACTTCGGTGTCG+AGG | - | chr2_3:48430517-48430536 | Msa0295740:CDS | 50.0% |
!! | GAGGAAAACTTCGGTGTCGA+GGG | - | chr2_3:48430518-48430537 | Msa0295740:CDS | 50.0% |
ACTGTTTGTCGCACTCGCAA+TGG | + | chr2_3:48430585-48430604 | None:intergenic | 50.0% | |
TCAAAGCCCTCGTGTCAGTA+TGG | - | chr2_3:48430667-48430686 | Msa0295740:five_prime_UTR | 50.0% | |
!! | GAGATTGGAGCGAGGTGTTG+GGG | + | chr2_3:48425556-48425575 | None:intergenic | 55.0% |
GAGAGATTGGAGCGAGGTGT+TGG | + | chr2_3:48425558-48425577 | None:intergenic | 55.0% | |
TTTCCGGACGGAGGTTTAGC+CGG | + | chr2_3:48426262-48426281 | None:intergenic | 55.0% | |
CCCCGGCAAGAAATCAACAC+CGG | + | chr2_3:48426308-48426327 | None:intergenic | 55.0% | |
!! | CCGGTGTTGATTTCTTGCCG+GGG | - | chr2_3:48426305-48426324 | Msa0295740:intron | 55.0% |
TTGTGCAGGAGCTTATGCGC+CGG | - | chr2_3:48426542-48426561 | Msa0295740:intron | 55.0% | |
! | TATGCGCCGGCAGAATCATG+AGG | - | chr2_3:48426555-48426574 | Msa0295740:intron | 55.0% |
CGGTCTCCTCATGATTCTGC+CGG | + | chr2_3:48426564-48426583 | None:intergenic | 55.0% | |
CGGCAGAATCATGAGGAGAC+CGG | - | chr2_3:48426562-48426581 | Msa0295740:intron | 55.0% | |
CCCATTTCCAACACCACCAC+CGG | + | chr2_3:48426596-48426615 | None:intergenic | 55.0% | |
! | CCGGTGGTGGTGTTGGAAAT+GGG | - | chr2_3:48426593-48426612 | Msa0295740:CDS | 55.0% |
!! | CAATGGCGGGTCATAAGGAG+AGG | - | chr2_3:48426695-48426714 | Msa0295740:intron | 55.0% |
TGTCTCACTCTCACCCTCTC+AGG | + | chr2_3:48426814-48426833 | None:intergenic | 55.0% | |
ACCCGTGACGTTGTCTCCTT+TGG | - | chr2_3:48427077-48427096 | Msa0295740:intron | 55.0% | |
GCCAAAGGAGACAACGTCAC+GGG | + | chr2_3:48427081-48427100 | None:intergenic | 55.0% | |
CGCCAAAGGAGACAACGTCA+CGG | + | chr2_3:48427082-48427101 | None:intergenic | 55.0% | |
CGTGACGTTGTCTCCTTTGG+CGG | - | chr2_3:48427080-48427099 | Msa0295740:intron | 55.0% | |
TGGAGAGGAAGAGAAAGGGG+AGG | - | chr2_3:48427112-48427131 | Msa0295740:intron | 55.0% | |
TGGACAAAACAGTGCGGCTG+TGG | - | chr2_3:48428903-48428922 | Msa0295740:intron | 55.0% | |
GGCCTACATGACTGCAACTC+AGG | + | chr2_3:48429036-48429055 | None:intergenic | 55.0% | |
TCTGTGCAGGGTGCACTAGT+TGG | - | chr2_3:48429637-48429656 | Msa0295740:CDS | 55.0% | |
CTGTGAGGGAGGCTGAAATC+TGG | + | chr2_3:48430232-48430251 | None:intergenic | 55.0% | |
TCAGCCTCCCTCACAGCAAA+TGG | - | chr2_3:48430236-48430255 | Msa0295740:CDS | 55.0% | |
GCCTGGTATGGGTGATGCAT+GGG | - | chr2_3:48430406-48430425 | Msa0295740:CDS | 55.0% | |
TCCCATGCATCACCCATACC+AGG | + | chr2_3:48430410-48430429 | None:intergenic | 55.0% | |
GAGGGTTCACGATCTGCTTC+AGG | - | chr2_3:48430536-48430555 | Msa0295740:CDS | 55.0% | |
CTCGCAATGGTTGCATGGTG+TGG | + | chr2_3:48430572-48430591 | None:intergenic | 55.0% | |
TCGCACTCGCAATGGTTGCA+TGG | + | chr2_3:48430577-48430596 | None:intergenic | 55.0% | |
!! | TGGAGCGAGGTGTTGGGGTT+CGG | + | chr2_3:48425551-48425570 | None:intergenic | 60.0% |
GGGGATCCGCCAGAATTACC+GGG | + | chr2_3:48426241-48426260 | None:intergenic | 60.0% | |
CGGGGATCCGCCAGAATTAC+CGG | + | chr2_3:48426242-48426261 | None:intergenic | 60.0% | |
! | CGGTAATTCTGGCGGATCCC+CGG | - | chr2_3:48426240-48426259 | Msa0295740:intron | 60.0% |
TTCCGGACGGAGGTTTAGCC+GGG | + | chr2_3:48426261-48426280 | None:intergenic | 60.0% | |
GAGGAGACCGGTGATGTAGC+CGG | - | chr2_3:48426574-48426593 | Msa0295740:CDS | 60.0% | |
! | ACCACCACCGGCTACATCAC+CGG | + | chr2_3:48426584-48426603 | None:intergenic | 60.0% |
! | GATGTAGCCGGTGGTGGTGT+TGG | - | chr2_3:48426586-48426605 | Msa0295740:CDS | 60.0% |
! | GCCGGTGGTGGTGTTGGAAA+TGG | - | chr2_3:48426592-48426611 | Msa0295740:CDS | 60.0% |
! | TGGCGGGTCATAAGGAGAGG+AGG | - | chr2_3:48426698-48426717 | Msa0295740:intron | 60.0% |
GGCAGGTTGTGGAGTCTGAG+AGG | - | chr2_3:48426977-48426996 | Msa0295740:CDS | 60.0% | |
GGAGACAACGTCACGGGTTC+CGG | + | chr2_3:48427075-48427094 | None:intergenic | 60.0% | |
AGGGGAGGTCGTCCGTTAGT+AGG | - | chr2_3:48427127-48427146 | Msa0295740:intron | 60.0% | |
GGTGCTCATGCTAGTCCCAC+CGG | + | chr2_3:48428591-48428610 | None:intergenic | 60.0% | |
! | GGGACTAGCATGAGCACCTC+TGG | - | chr2_3:48428593-48428612 | Msa0295740:intron | 60.0% |
TCAGTAGCCATTCCCTGGCC+TGG | - | chr2_3:48430389-48430408 | Msa0295740:CDS | 60.0% | |
AGCCATTCCCTGGCCTGGTA+TGG | - | chr2_3:48430394-48430413 | Msa0295740:CDS | 60.0% | |
GCCATTCCCTGGCCTGGTAT+GGG | - | chr2_3:48430395-48430414 | Msa0295740:CDS | 60.0% | |
ACCCATACCAGGCCAGGGAA+TGG | + | chr2_3:48430399-48430418 | None:intergenic | 60.0% | |
GCATCACCCATACCAGGCCA+GGG | + | chr2_3:48430404-48430423 | None:intergenic | 60.0% | |
TGCATCACCCATACCAGGCC+AGG | + | chr2_3:48430405-48430424 | None:intergenic | 60.0% | |
GGCCTGGTATGGGTGATGCA+TGG | - | chr2_3:48430405-48430424 | Msa0295740:CDS | 60.0% | |
TCCCCGGCTAAACCTCCGTC+CGG | - | chr2_3:48426256-48426275 | Msa0295740:intron | 65.0% | |
TCCGGACGGAGGTTTAGCCG+GGG | + | chr2_3:48426260-48426279 | None:intergenic | 65.0% | |
GAGACCGGTGATGTAGCCGG+TGG | - | chr2_3:48426577-48426596 | Msa0295740:CDS | 65.0% | |
ACCGGTGATGTAGCCGGTGG+TGG | - | chr2_3:48426580-48426599 | Msa0295740:CDS | 65.0% | |
CTTCGTCGGAGAAAGGCGGG+AGG | - | chr2_3:48426740-48426759 | Msa0295740:intron | 65.0% | |
GAGGAGGTCGAGCTCGGCTA+CGG | - | chr2_3:48426759-48426778 | Msa0295740:CDS | 65.0% | |
CGTCGGAGAAAGGCGGGAGG+AGG | - | chr2_3:48426743-48426762 | Msa0295740:intron | 70.0% | |
AGGCGGGAGGAGGTCGAGCT+CGG | - | chr2_3:48426753-48426772 | Msa0295740:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 48425528 | 48430927 | 48425528 | ID=Msa0295740;Name=Msa0295740 |
chr2_3 | mRNA | 48425528 | 48430927 | 48425528 | ID=Msa0295740-mRNA-1;Parent=Msa0295740;Name=Msa0295740-mRNA-1;_AED=0.07;_eAED=0.07;_QI=272|0.85|0.75|1|1|1|8|0|861 |
chr2_3 | exon | 48425528 | 48425613 | 48425528 | ID=Msa0295740-mRNA-1:exon:15219;Parent=Msa0295740-mRNA-1 |
chr2_3 | exon | 48425697 | 48426245 | 48425697 | ID=Msa0295740-mRNA-1:exon:15218;Parent=Msa0295740-mRNA-1 |
chr2_3 | exon | 48426387 | 48426480 | 48426387 | ID=Msa0295740-mRNA-1:exon:15217;Parent=Msa0295740-mRNA-1 |
chr2_3 | exon | 48426563 | 48426645 | 48426563 | ID=Msa0295740-mRNA-1:exon:15216;Parent=Msa0295740-mRNA-1 |
chr2_3 | exon | 48426758 | 48426809 | 48426758 | ID=Msa0295740-mRNA-1:exon:15215;Parent=Msa0295740-mRNA-1 |
chr2_3 | exon | 48426893 | 48427050 | 48426893 | ID=Msa0295740-mRNA-1:exon:15214;Parent=Msa0295740-mRNA-1 |
chr2_3 | exon | 48427481 | 48427571 | 48427481 | ID=Msa0295740-mRNA-1:exon:15213;Parent=Msa0295740-mRNA-1 |
chr2_3 | exon | 48429183 | 48430927 | 48429183 | ID=Msa0295740-mRNA-1:exon:15212;Parent=Msa0295740-mRNA-1 |
chr2_3 | five_prime_UTR | 48430656 | 48430927 | 48430656 | ID=Msa0295740-mRNA-1:five_prime_utr;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48429183 | 48430655 | 48429183 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48427481 | 48427571 | 48427481 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48426893 | 48427050 | 48426893 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48426758 | 48426809 | 48426758 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48426563 | 48426645 | 48426563 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48426387 | 48426480 | 48426387 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48425697 | 48426245 | 48425697 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
chr2_3 | CDS | 48425528 | 48425613 | 48425528 | ID=Msa0295740-mRNA-1:cds;Parent=Msa0295740-mRNA-1 |
Gene Sequence |
Protein sequence |