AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0256600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256600 MtrunA17_Chr2g0317931 96.292 863 12 5 1 848 1 858 0.0 1699
Msa0256600 MtrunA17_Chr7g0238321 51.705 528 216 8 202 719 271 769 6.39e-164 501
Msa0256600 MtrunA17_Chr8g0388841 33.693 834 417 24 25 848 7 714 1.66e-134 417
Msa0256600 MtrunA17_Chr3g0127171 42.413 547 257 14 321 848 195 702 5.29e-129 402
Msa0256600 MtrunA17_Chr1g0146771 43.462 520 242 16 339 848 232 709 2.47e-124 390
Msa0256600 MtrunA17_Chr8g0384061 36.852 521 238 9 340 848 204 645 2.67e-95 312
Msa0256600 MtrunA17_Chr3g0129821 37.115 520 257 10 340 848 168 628 3.54e-91 300
Msa0256600 MtrunA17_Chr4g0067151 31.390 223 137 9 466 682 65 277 1.40e-24 105
Msa0256600 MtrunA17_Chr1g0185501 29.954 217 130 10 475 682 65 268 9.42e-19 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256600 AT3G15470.1 58.674 905 279 20 14 848 4 883 0.0 916
Msa0256600 AT5G54200.1 58.420 861 281 14 9 848 21 825 0.0 914
Msa0256600 AT2G37670.2 52.037 540 190 11 202 718 249 742 5.24e-161 493
Msa0256600 AT2G37670.1 52.037 540 190 11 202 718 248 741 6.11e-161 492
Msa0256600 AT5G02430.1 49.826 574 246 10 152 719 222 759 8.69e-157 481
Msa0256600 AT5G53500.2 41.828 569 250 15 284 846 159 652 1.31e-120 379
Msa0256600 AT5G53500.1 41.828 569 250 15 284 846 159 652 1.31e-120 379
Msa0256600 AT5G24320.1 41.101 545 250 12 321 848 204 694 1.19e-115 368
Msa0256600 AT5G24320.2 40.801 549 250 13 321 848 204 698 1.74e-113 362
Msa0256600 AT5G42010.1 40.000 530 242 14 342 848 233 709 5.00e-112 358
Msa0256600 AT1G64610.2 39.804 510 248 13 342 848 194 647 5.49e-108 346
Msa0256600 AT1G64610.1 39.804 510 248 13 342 848 194 647 5.49e-108 346
Msa0256600 AT5G42010.2 47.447 333 161 8 342 672 233 553 8.62e-90 295
Msa0256600 AT1G48870.2 33.333 507 249 9 340 845 172 590 8.48e-86 285
Msa0256600 AT1G48870.3 33.333 507 249 9 340 845 172 590 8.48e-86 285
Msa0256600 AT1G48870.1 33.333 507 249 9 340 845 172 590 8.48e-86 285
Msa0256600 AT4G02730.1 29.224 219 138 10 475 686 81 289 2.21e-20 94.0
Msa0256600 AT3G49660.1 28.636 220 141 9 470 683 62 271 3.94e-20 92.8
Msa0256600 AT3G49660.1 24.198 343 206 13 353 682 11 312 6.98e-13 71.2
Msa0256600 AT2G16405.1 25.820 244 145 10 464 682 199 431 1.77e-12 71.2

Find 258 sgRNAs with CRISPR-Local

Find 435 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTGTTCTTGTGCTTAT+TGG 0.071791 2_2:-51425052 Msa0256600:three_prime_UTR
ATTAGAACTTTCCAAAATTT+TGG 0.114825 2_2:-51425246 Msa0256600:CDS
CCCTTAACAGTTACGATATA+TGG 0.153469 2_2:-51430002 Msa0256600:CDS
AATATGTTATTTCTTGTTAA+TGG 0.154159 2_2:-51428965 Msa0256600:CDS
AAACCCGTTTGCTCCTTTAA+AGG 0.187744 2_2:-51428803 Msa0256600:CDS
GATCTGGTTCATAAGTTTAA+AGG 0.211448 2_2:-51425963 Msa0256600:intron
AGTTCTATTCCCGGTAATTC+TGG 0.223804 2_2:-51429781 Msa0256600:CDS
TTTCTTGGTCTTCGTCTTCT+TGG 0.228579 2_2:+51430061 None:intergenic
GAAGTGGCAATCCAAAATTT+TGG 0.230511 2_2:+51425235 None:intergenic
ATACTTCATTAGTGGATCTT+TGG 0.232896 2_2:-51426571 Msa0256600:CDS
TCCATTATCAAGATCTCTTA+TGG 0.253771 2_2:+51429609 None:intergenic
ATCATGCAAATGACCTTTAA+AGG 0.262544 2_2:+51428790 None:intergenic
AGTATTAAGTTTAGTTTAGA+TGG 0.278056 2_2:-51429100 Msa0256600:CDS
AAGCTCATAATGGATCAATT+TGG 0.292538 2_2:-51429123 Msa0256600:CDS
TCAAATCACAAGAAAATTAC+TGG 0.302245 2_2:-51426147 Msa0256600:CDS
GGGTAATTCTTCTACTTTGC+TGG 0.303468 2_2:-51429686 Msa0256600:CDS
TTCCGGTGTTGATTTCTTGC+CGG 0.304461 2_2:-51429707 Msa0256600:CDS
TCCTTTGGCGGATAATCTTC+TGG 0.309791 2_2:-51428918 Msa0256600:CDS
TGGTAATGGAGGTTGTTCTA+AGG 0.310884 2_2:-51429389 Msa0256600:CDS
TCTTCTAGAAGAATTCTTTC+CGG 0.314096 2_2:+51429735 None:intergenic
CAAGAAAATTACTGGTTTCC+AGG 0.315246 2_2:-51426139 Msa0256600:intron
ATATGTTATTTCTTGTTAAT+GGG 0.320409 2_2:-51428964 Msa0256600:CDS
AGGGTGAGAGTGAGACAATA+TGG 0.320663 2_2:-51429193 Msa0256600:CDS
GAAAGGGGAGTTGTTGCTTA+TGG 0.321504 2_2:-51429011 Msa0256600:CDS
CGGATCGACAAGTTGTTGAT+TGG 0.329763 2_2:-51426521 Msa0256600:CDS
ACCCGTGACGTTGTCTCCTT+TGG 0.330639 2_2:-51428933 Msa0256600:CDS
CGGGGATCCGCCAGAATTAC+CGG 0.330665 2_2:+51429771 None:intergenic
GTCAGATTTGGATCGGAATA+TGG 0.333292 2_2:+51429870 None:intergenic
GGGGTTGTTGAGATTGAGAT+TGG 0.333340 2_2:+51430241 None:intergenic
GGAGACAACGTCACGGGTTC+CGG 0.336795 2_2:+51428938 None:intergenic
AATGAGAATGGGTTTGTTCA+TGG 0.340709 2_2:+51430212 None:intergenic
TCCATATATCGTAACTGTTA+AGG 0.344747 2_2:+51430001 None:intergenic
GCCGGTGGTGGTGTTGGAAA+TGG 0.352022 2_2:-51429418 Msa0256600:CDS
CCTCTCTTGGTCTAAGTCTC+AGG 0.354450 2_2:-51428759 Msa0256600:intron
ACTCGTCTTCTTCAAACTAT+TGG 0.355721 2_2:-51429946 Msa0256600:CDS
AGCCATTCCCTGGCCTGGTA+TGG 0.363748 2_2:-51425616 Msa0256600:CDS
GAGGGTTCACGATCTGCTTC+AGG 0.366525 2_2:-51425474 Msa0256600:CDS
GTCAGTATGGATTTCACAAA+TGG 0.367312 2_2:-51425330 Msa0256600:CDS
AAAGTGAAGGAGGTTGGTAC+TGG 0.368514 2_2:-51429541 Msa0256600:CDS
GATGATAGATACTTCATTAG+TGG 0.371354 2_2:-51426579 Msa0256600:CDS
ACCATAAGAGATCTTGATAA+TGG 0.372863 2_2:-51429610 Msa0256600:CDS
AGAGATTGGAGCGAGGTGTT+GGG 0.377092 2_2:+51430458 None:intergenic
GGTGACACCTTTACTTCTGT+TGG 0.380370 2_2:+51425683 None:intergenic
TAGTAGGAAGTCGTTGAGTT+TGG 0.382361 2_2:-51428867 Msa0256600:CDS
TCAAAGCCCTCGTGTCAGTA+TGG 0.385856 2_2:-51425343 Msa0256600:CDS
ATGGCATTGTAAGGTGGGAT+TGG 0.388194 2_2:+51429889 None:intergenic
TATCATCAACAGGATTAAAC+TGG 0.390022 2_2:+51426595 None:intergenic
TGTGCTTATTGGATGAAGAT+AGG 0.390578 2_2:-51425041 Msa0256600:three_prime_UTR
CGCATAAGCTCCTGCACAAT+CGG 0.393774 2_2:+51429472 None:intergenic
TGGAGCGAGGTGTTGGGGTT+CGG 0.395433 2_2:+51430464 None:intergenic
TGTGAAGAATGAATGAGTTA+AGG 0.398605 2_2:+51430422 None:intergenic
ACTTCTGTTGGGCCTGCAAT+CGG 0.398774 2_2:+51425695 None:intergenic
GTGACACCTTTACTTCTGTT+GGG 0.400336 2_2:+51425684 None:intergenic
TTCGTCTTCTTGGTCAGAGT+TGG 0.402171 2_2:+51430071 None:intergenic
GCCTGGTATGGGTGATGCAT+GGG 0.403215 2_2:-51425604 Msa0256600:CDS
GTTGTTGCTTATGGAGAAAC+AGG 0.403691 2_2:-51429002 Msa0256600:CDS
AGTACTTCTGATGAACTTCC+TGG 0.405091 2_2:+51426029 None:intergenic
GTGAAAGAAGTTAGAGAAGA+TGG 0.405227 2_2:-51429574 Msa0256600:CDS
GTTGATGTTGTTGTTGGAGT+TGG 0.406911 2_2:+51430178 None:intergenic
GGCCTGGTATGGGTGATGCA+TGG 0.409184 2_2:-51425605 Msa0256600:CDS
ACCACGTGAAAGGGCAAAAT+CGG 0.410979 2_2:+51429915 None:intergenic
TCCGGTGTTGATTTCTTGCC+GGG 0.411796 2_2:-51429706 Msa0256600:CDS
CAAGAGATTCAAGCTCATAA+TGG 0.414387 2_2:-51429133 Msa0256600:CDS
GTTGTTATGACCGTCAGATT+TGG 0.414968 2_2:+51429858 None:intergenic
GTTGGTGTTGATGTTGTTGT+TGG 0.416733 2_2:+51430172 None:intergenic
TTCCGGACGGAGGTTTAGCC+GGG 0.417860 2_2:+51429752 None:intergenic
GATTCATGTTTGGCAGGTTG+TGG 0.418930 2_2:-51429044 Msa0256600:CDS
GTTTGTGTATGGTGAGAGAT+TGG 0.420689 2_2:+51430444 None:intergenic
AACCACACTAACATTTGCTC+AGG 0.422037 2_2:-51430299 Msa0256600:five_prime_UTR
TTTACAGTGAAAATGTTCAT+AGG 0.422742 2_2:+51425650 None:intergenic
ATGATGTGCTTGACCTCTCT+TGG 0.423598 2_2:-51428772 Msa0256600:CDS
TTGTGGAGTCTGAGAGGAAA+GGG 0.424221 2_2:-51429027 Msa0256600:CDS
CCATATATCGTAACTGTTAA+GGG 0.424632 2_2:+51430002 None:intergenic
GAGAGATTGGAGCGAGGTGT+TGG 0.426085 2_2:+51430457 None:intergenic
ATTCGTAGAAGAAATCTTGT+TGG 0.429715 2_2:+51430142 None:intergenic
AGGATTGTGTGATTCATGTT+TGG 0.432003 2_2:-51429054 Msa0256600:CDS
AGTGAGTGCAAACACATGTT+CGG 0.432044 2_2:+51428829 None:intergenic
AATGTAAATAGTTCTATTCC+CGG 0.433199 2_2:-51429790 Msa0256600:CDS
TTCTTCTACTTTGCTGGACA+CGG 0.433364 2_2:-51429680 Msa0256600:CDS
AGGATTCCCATGTATACATC+TGG 0.438205 2_2:-51425728 Msa0256600:CDS
TACTGGGAGACAGTTGACTA+TGG 0.438212 2_2:-51429524 Msa0256600:CDS
TAGTTCAATGGCAGGTCATA+AGG 0.438789 2_2:-51429320 Msa0256600:CDS
AGTCAAGATGGGTCATTTCA+TGG 0.438874 2_2:-51429223 Msa0256600:CDS
TTGTTATACACCTGATGGTC+AGG 0.439552 2_2:-51426469 Msa0256600:intron
GATCGGAATATGGCATTGTA+AGG 0.442136 2_2:+51429880 None:intergenic
CTGTGAGGGAGGCTGAAATC+TGG 0.442676 2_2:+51425781 None:intergenic
TGTCTCACTCTCACCCTCTC+AGG 0.442951 2_2:+51429199 None:intergenic
CTTGAACCAACCTGACCATC+AGG 0.443778 2_2:+51426459 None:intergenic
TTTGAGAGAGATTTAAGAGA+GGG 0.447068 2_2:+51430393 None:intergenic
GTGAGATTTGTAATATTAGC+GGG 0.447102 2_2:-51425086 Msa0256600:three_prime_UTR
GTTGAGTTTGGACCAGTTTG+TGG 0.447377 2_2:-51428855 Msa0256600:CDS
TGGCATTGTAAGGTGGGATT+GGG 0.449165 2_2:+51429890 None:intergenic
AGGGGAGGTCGTCCGTTAGT+AGG 0.450408 2_2:-51428883 Msa0256600:CDS
GCCATTCCCTGGCCTGGTAT+GGG 0.450820 2_2:-51425615 Msa0256600:CDS
CTTCTGGAGAGGAAGAGAAA+GGG 0.453072 2_2:-51428902 Msa0256600:CDS
GGTTCGCATATGGAGCATTC+CGG 0.453183 2_2:-51426541 Msa0256600:CDS
TCTCGAATACGGGTTGTTGA+TGG 0.453927 2_2:-51425990 Msa0256600:CDS
ATGAAGTATCTATCATCAAC+AGG 0.454580 2_2:+51426585 None:intergenic
TGGATGCTAAGGTTCGCATA+TGG 0.456377 2_2:-51426551 Msa0256600:CDS
GTCGTTGTTGCTATCAAGCT+CGG 0.457779 2_2:+51425551 None:intergenic
TAGTGGATCTTTGGATGCTA+AGG 0.458377 2_2:-51426562 Msa0256600:CDS
ATGACCTTTAAAGGAGCAAA+CGG 0.460221 2_2:+51428799 None:intergenic
AGAGATACTTCGTCGGAGAA+AGG 0.460899 2_2:-51429277 Msa0256600:CDS
GGGTGAGAGTGAGACAATAT+GGG 0.461483 2_2:-51429192 Msa0256600:CDS
TCTTCTAGAAGAAGTCATTC+CGG 0.463152 2_2:-51429724 Msa0256600:CDS
AGTAGAAGAAGAGATAAAAC+AGG 0.465592 2_2:+51429816 None:intergenic
ATAGTCATACACATATTCTA+TGG 0.465975 2_2:+51425200 None:intergenic
GCACTTGCTCTCATCTTCAA+TGG 0.466256 2_2:-51427127 Msa0256600:CDS
GGTTGTTGATGGTATTGATC+TGG 0.466728 2_2:-51425979 Msa0256600:CDS
TGCATCACCCATACCAGGCC+AGG 0.466953 2_2:+51425608 None:intergenic
CCGGTGGTGGTGTTGGAAAT+GGG 0.467471 2_2:-51429417 Msa0256600:CDS
GGTAATGGAGGTTGTTCTAA+GGG 0.468975 2_2:-51429388 Msa0256600:CDS
AATCTTGTTGGTCTAGTTGT+TGG 0.470295 2_2:+51430154 None:intergenic
GTGAGTGCAAACACATGTTC+GGG 0.470370 2_2:+51428830 None:intergenic
CGGTAATTCTGGCGGATCCC+CGG 0.475497 2_2:-51429770 Msa0256600:CDS
CATGTTCGGGAACCACAAAC+TGG 0.476756 2_2:+51428843 None:intergenic
GTATTAAGTTTAGTTTAGAT+GGG 0.476966 2_2:-51429099 Msa0256600:CDS
TTGTGTGATTCATGTTTGGC+AGG 0.477071 2_2:-51429050 Msa0256600:CDS
TTTCCGGACGGAGGTTTAGC+CGG 0.477265 2_2:+51429751 None:intergenic
AAGAGGAGAGAGAGAGTAAA+CGG 0.478902 2_2:+51430112 None:intergenic
TCAGTAGCCATTCCCTGGCC+TGG 0.479922 2_2:-51425621 Msa0256600:CDS
CATCTGCTGATTCTCGAATA+CGG 0.481379 2_2:-51426001 Msa0256600:CDS
ATATTTACCATTTGCTGTGA+GGG 0.481702 2_2:+51425767 None:intergenic
CGTGACGTTGTCTCCTTTGG+CGG 0.482687 2_2:-51428930 Msa0256600:CDS
ACCGGTGATGTAGCCGGTGG+TGG 0.485090 2_2:-51429430 Msa0256600:CDS
TGTCATTTATATAATACATC+TGG 0.485507 2_2:-51426334 Msa0256600:intron
TCAGCCTCCCTCACAGCAAA+TGG 0.486149 2_2:-51425774 Msa0256600:CDS
TGGACAAAACAGTGCGGCTG+TGG 0.490355 2_2:-51427107 Msa0256600:CDS
GTTGAGATTGAGATTGGGAT+TGG 0.490619 2_2:+51430247 None:intergenic
GGGTTGTTGAGATTGAGATT+GGG 0.491004 2_2:+51430242 None:intergenic
TTGAGATTGAGATTGGGATT+GGG 0.492778 2_2:+51430248 None:intergenic
TCAGTATGGATTTCACAAAT+GGG 0.493127 2_2:-51425329 Msa0256600:CDS
ATTGTTACTGCTGGTCTTCG+AGG 0.493885 2_2:-51425273 Msa0256600:CDS
CAATCAACAACTTGTCGATC+CGG 0.494327 2_2:+51426522 None:intergenic
ACGAGTACGACGTTCTGAAA+CGG 0.496617 2_2:+51429963 None:intergenic
TCTGTGCAGGGTGCACTAGT+TGG 0.499249 2_2:-51426373 Msa0256600:intron
TACAGGTGTAGGAGGATGAT+TGG 0.499821 2_2:+51425515 None:intergenic
TGGAATAAAGTGAAGGAGGT+TGG 0.500727 2_2:-51429547 Msa0256600:CDS
GATGTAGCCGGTGGTGGTGT+TGG 0.500879 2_2:-51429424 Msa0256600:CDS
TTCTTGGTCAGAGTTGGAGT+TGG 0.500980 2_2:+51430077 None:intergenic
CGGAATATGGCATTGTAAGG+TGG 0.504983 2_2:+51429883 None:intergenic
CGAGTTGATATCAGCTCAGA+AGG 0.505155 2_2:-51425161 Msa0256600:three_prime_UTR
TAGAATTTCTGCAACATGGC+CGG 0.505340 2_2:-51425394 Msa0256600:CDS
GTCTTCTTGAGAAATGAGAA+TGG 0.506187 2_2:+51430200 None:intergenic
TCTTCTGGAGAGGAAGAGAA+AGG 0.514361 2_2:-51428903 Msa0256600:CDS
GTTGGAGTTGGAACAAGAGC+AGG 0.515164 2_2:+51430089 None:intergenic
GAGGAGGTCGAGCTCGGCTA+CGG 0.516325 2_2:-51429251 Msa0256600:CDS
TCTTCTTGAGAAATGAGAAT+GGG 0.517246 2_2:+51430201 None:intergenic
CACTAACATTTGCTCAGGGA+AGG 0.519154 2_2:-51430294 Msa0256600:five_prime_UTR
CGTCGGAGAAAGGCGGGAGG+AGG 0.519256 2_2:-51429267 Msa0256600:CDS
CAAGAGTGTTGCTAGTTCAA+TGG 0.519515 2_2:-51429332 Msa0256600:CDS
GGTATGGTGATTGTTACTGC+TGG 0.519931 2_2:-51425282 Msa0256600:CDS
CCCATTTCCAACACCACCAC+CGG 0.520955 2_2:+51429417 None:intergenic
ATCTGCTGATTCTCGAATAC+GGG 0.522317 2_2:-51426000 Msa0256600:CDS
TGCACTAGTTGGTTCATACA+AGG 0.522538 2_2:-51426362 Msa0256600:CDS
TGGTCAATCTCCGATTGTGC+AGG 0.524667 2_2:-51429482 Msa0256600:CDS
TGACCTTTAAAGGAGCAAAC+GGG 0.525285 2_2:+51428800 None:intergenic
GTTGGAACAAGAGCAGGAAG+AGG 0.525322 2_2:+51430095 None:intergenic
GGATTGGGTTACCACGTGAA+AGG 0.527047 2_2:+51429905 None:intergenic
ATACTTCGTCGGAGAAAGGC+GGG 0.528933 2_2:-51429273 Msa0256600:CDS
GGGAAATATCTTGCTAGTGC+TGG 0.528990 2_2:-51429079 Msa0256600:CDS
ACCACCACCGGCTACATCAC+CGG 0.532113 2_2:+51429429 None:intergenic
TCCCATGCATCACCCATACC+AGG 0.535005 2_2:+51425603 None:intergenic
GAGATTGGAGCGAGGTGTTG+GGG 0.536749 2_2:+51430459 None:intergenic
TGCAGGCCCAACAGAAGTAA+AGG 0.537014 2_2:-51425690 Msa0256600:CDS
AGGCGGGAGGAGGTCGAGCT+CGG 0.539651 2_2:-51429257 Msa0256600:CDS
GTACTTCTGATGAACTTCCT+GGG 0.541085 2_2:+51426030 None:intergenic
GGAATATGGCATTGTAAGGT+GGG 0.542196 2_2:+51429884 None:intergenic
GCTACGGATGATAGTCAAGA+TGG 0.542559 2_2:-51429235 Msa0256600:CDS
AATGAGTTAAGGTTTGTGTA+TGG 0.542837 2_2:+51430433 None:intergenic
TCCCCGGCTAAACCTCCGTC+CGG 0.543498 2_2:-51429754 Msa0256600:CDS
CGGTCTCCTCATGATTCTGC+CGG 0.544667 2_2:+51429449 None:intergenic
TCGATAGAATTTCTGCAACA+TGG 0.545086 2_2:-51425398 Msa0256600:CDS
AGATCACCTTCTCCATAAGC+TGG 0.546253 2_2:-51425132 Msa0256600:three_prime_UTR
CGACGTTCTGAAACGGAAGA+AGG 0.546555 2_2:+51429970 None:intergenic
ATTTGAGAGAGATTTAAGAG+AGG 0.546952 2_2:+51430392 None:intergenic
TGTGGAGTCTGAGAGGAAAG+GGG 0.547241 2_2:-51429026 Msa0256600:CDS
CTCGCAATGGTTGCATGGTG+TGG 0.549432 2_2:+51425441 None:intergenic
AAGTTAGAGAAGATGGAATG+TGG 0.550294 2_2:-51429567 Msa0256600:CDS
GATTGGGTTACCACGTGAAA+GGG 0.551300 2_2:+51429906 None:intergenic
GGAAATGGGAGTAATGGTAA+TGG 0.552792 2_2:-51429403 Msa0256600:CDS
TATGACCGTCAGATTTGGAT+CGG 0.552937 2_2:+51429863 None:intergenic
GAGGAATTTGAGATGACGGT+TGG 0.552951 2_2:-51429502 Msa0256600:CDS
ACTGTTTGTCGCACTCGCAA+TGG 0.554025 2_2:+51425428 None:intergenic
AAGTGAAGGAGGTTGGTACT+GGG 0.559730 2_2:-51429540 Msa0256600:CDS
GAGGAGACCGGTGATGTAGC+CGG 0.560566 2_2:-51429436 Msa0256600:CDS
TCCCTGAGCAAATGTTAGTG+TGG 0.561014 2_2:+51430297 None:intergenic
ATTTCTTGTTAATGGGTCGC+CGG 0.562164 2_2:-51428957 Msa0256600:CDS
TTGGATCGATCTTCATGAGA+TGG 0.562964 2_2:-51426502 Msa0256600:CDS
ACCCATACCAGGCCAGGGAA+TGG 0.565424 2_2:+51425614 None:intergenic
ATGTGTCAGTAGCCATTCCC+TGG 0.566854 2_2:-51425626 Msa0256600:CDS
TCTTCTACTTTGCTGGACAC+GGG 0.568140 2_2:-51429679 Msa0256600:CDS
TCGCACTCGCAATGGTTGCA+TGG 0.572307 2_2:+51425436 None:intergenic
GGTGTTGGAAATGGGAGTAA+TGG 0.576549 2_2:-51429409 Msa0256600:CDS
GATACTTCGTCGGAGAAAGG+CGG 0.578609 2_2:-51429274 Msa0256600:CDS
AGTGAGATTTGTAATATTAG+CGG 0.581551 2_2:-51425087 Msa0256600:three_prime_UTR
AGTGTTGCTAGTTCAATGGC+AGG 0.581676 2_2:-51429328 Msa0256600:CDS
TTTACCATTTGCTGTGAGGG+AGG 0.584191 2_2:+51425770 None:intergenic
AGAGGAAAACTTCGGTGTCG+AGG 0.584446 2_2:-51425493 Msa0256600:CDS
TTCTGGAGAGGAAGAGAAAG+GGG 0.586118 2_2:-51428901 Msa0256600:CDS
GGGGATCCGCCAGAATTACC+GGG 0.587533 2_2:+51429772 None:intergenic
CGGCAGAATCATGAGGAGAC+CGG 0.589002 2_2:-51429448 Msa0256600:CDS
GCCAAAGGAGACAACGTCAC+GGG 0.589907 2_2:+51428932 None:intergenic
ATATATTGTTGCTGCAAGTG+AGG 0.589984 2_2:-51425748 Msa0256600:CDS
GAGGAAAACTTCGGTGTCGA+GGG 0.590606 2_2:-51425492 Msa0256600:CDS
TCATCCTCCTACACCTGTAG+AGG 0.591962 2_2:-51425511 Msa0256600:CDS
CTAGAAGAATTCTTTCCGGA+CGG 0.592446 2_2:+51429739 None:intergenic
GAAGAATTCTTTCCGGACGG+AGG 0.594884 2_2:+51429742 None:intergenic
ATATCTTGCTAGTGCTGGTG+AGG 0.595765 2_2:-51429074 Msa0256600:CDS
AATGGGAGTAATGGTAATGG+AGG 0.600063 2_2:-51429400 Msa0256600:CDS
TGGCAGGTCATAAGGAGAGG+AGG 0.604323 2_2:-51429312 Msa0256600:CDS
ATCCAATAAGCACAAGAACA+AGG 0.607574 2_2:+51425050 None:intergenic
AGTAACAATCACCATACCCC+AGG 0.610628 2_2:+51425287 None:intergenic
ATGGTCTCTTATATTCGAAG+TGG 0.610791 2_2:+51425219 None:intergenic
TCCAGAAGATTATCCGCCAA+AGG 0.612551 2_2:+51428917 None:intergenic
ACTAACATTTGCTCAGGGAA+GGG 0.613923 2_2:-51430293 Msa0256600:five_prime_UTR
GTTGTGGAGTCTGAGAGGAA+AGG 0.615157 2_2:-51429028 Msa0256600:CDS
GTCATTTCATGGACCTGAGA+GGG 0.616808 2_2:-51429212 Msa0256600:CDS
TATATTTACCATTTGCTGTG+AGG 0.618354 2_2:+51425766 None:intergenic
ACCACACTAACATTTGCTCA+GGG 0.618518 2_2:-51430298 Msa0256600:five_prime_UTR
TATGGAGGAATTTGAGATGA+CGG 0.619376 2_2:-51429506 Msa0256600:CDS
CAATGGCAGGTCATAAGGAG+AGG 0.619543 2_2:-51429315 Msa0256600:CDS
GCATCACCCATACCAGGCCA+GGG 0.621344 2_2:+51425609 None:intergenic
TCTATTCCCGGTAATTCTGG+CGG 0.621853 2_2:-51429778 Msa0256600:CDS
GCTGCTTGTTATACACCTGA+TGG 0.625541 2_2:-51426474 Msa0256600:CDS
GGCAGGTTGTGGAGTCTGAG+AGG 0.626338 2_2:-51429033 Msa0256600:CDS
TACTTCTGATGAACTTCCTG+GGG 0.627143 2_2:+51426031 None:intergenic
CTACGGATGATAGTCAAGAT+GGG 0.627312 2_2:-51429234 Msa0256600:CDS
TGGCGGATAATCTTCTGGAG+AGG 0.629487 2_2:-51428913 Msa0256600:CDS
CCTGAGACTTAGACCAAGAG+AGG 0.630082 2_2:+51428759 None:intergenic
AGCAAAGTAGAAGAATTACC+CGG 0.631460 2_2:+51429688 None:intergenic
TTGTGCAGGAGCTTATGCGC+CGG 0.632452 2_2:-51429468 Msa0256600:CDS
TGAGATTTGTAATATTAGCG+GGG 0.636896 2_2:-51425085 Msa0256600:three_prime_UTR
TGGAATGTGGAATAAAGTGA+AGG 0.638048 2_2:-51429554 Msa0256600:CDS
TGGAGAGGAAGAGAAAGGGG+AGG 0.640683 2_2:-51428898 Msa0256600:CDS
TGATGAGAGAGATACTTCGT+CGG 0.650321 2_2:-51429284 Msa0256600:CDS
ATATTCCGATCCAAATCTGA+CGG 0.651541 2_2:-51429868 Msa0256600:CDS
ACTCAACGACTTCCTACTAA+CGG 0.653986 2_2:+51428871 None:intergenic
CAGTATGGATTTCACAAATG+GGG 0.657850 2_2:-51425328 Msa0256600:CDS
CGCCAAAGGAGACAACGTCA+CGG 0.658328 2_2:+51428931 None:intergenic
GTAATGGAGGTTGTTCTAAG+GGG 0.662677 2_2:-51429387 Msa0256600:CDS
GGTCATTTCATGGACCTGAG+AGG 0.666445 2_2:-51429213 Msa0256600:CDS
TATGCGCCGGCAGAATCATG+AGG 0.668765 2_2:-51429455 Msa0256600:CDS
GTTGCTTATGGAGAAACAGG+AGG 0.670617 2_2:-51428999 Msa0256600:CDS
ACCCGGCAAGAAATCAACAC+CGG 0.672105 2_2:+51429705 None:intergenic
TGGGAGACAGTTGACTATGG+AGG 0.676143 2_2:-51429521 Msa0256600:CDS
ACACCTGTAGAGGAAAACTT+CGG 0.682782 2_2:-51425501 Msa0256600:CDS
GCACTAGTTGGTTCATACAA+GGG 0.684365 2_2:-51426361 Msa0256600:CDS
TCCGGACGGAGGTTTAGCCG+GGG 0.685261 2_2:+51429753 None:intergenic
AATGTGGAATAAAGTGAAGG+AGG 0.688067 2_2:-51429551 Msa0256600:CDS
GTGAAATCCATACTGACACG+AGG 0.695168 2_2:+51425336 None:intergenic
ATGTTCATAGGACTGTGTCA+CGG 0.698331 2_2:+51425662 None:intergenic
TGAAATCCATACTGACACGA+GGG 0.711651 2_2:+51425337 None:intergenic
TATGGTGAGAGATTGGAGCG+AGG 0.720760 2_2:+51430451 None:intergenic
CTTCGTCGGAGAAAGGCGGG+AGG 0.733071 2_2:-51429270 Msa0256600:CDS
GAGACCGGTGATGTAGCCGG+TGG 0.736645 2_2:-51429433 Msa0256600:CDS
CTTCAATGGACAAAACAGTG+CGG 0.776088 2_2:-51427113 Msa0256600:CDS
TGTATGACTATATGTCACAG+CGG 0.780665 2_2:-51425188 Msa0256600:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTAATTCAATTTTTAATA+GGG + chr2_2:51428633-51428652 None:intergenic 10.0%
!!! AATCTAATTCAATTTTTAAT+AGG + chr2_2:51428634-51428653 None:intergenic 10.0%
!!! AATATGTTATTTCTTGTTAA+TGG - chr2_2:51426542-51426561 Msa0256600:CDS 15.0%
!!! ATATGTTATTTCTTGTTAAT+GGG - chr2_2:51426543-51426562 Msa0256600:CDS 15.0%
!!! TCAGTATTGATTTTATAATT+GGG - chr2_2:51426980-51426999 Msa0256600:intron 15.0%
!!! TTTATAAACTTCGTTTTTAA+TGG - chr2_2:51427318-51427337 Msa0256600:intron 15.0%
!!! TTATAAACTTCGTTTTTAAT+GGG - chr2_2:51427319-51427338 Msa0256600:intron 15.0%
!!! CATTTAAAATGAACAATTTA+GGG - chr2_2:51427406-51427425 Msa0256600:intron 15.0%
!!! TAAATACAATTTTAGTTTTG+TGG + chr2_2:51427744-51427763 None:intergenic 15.0%
!! GTTTAACAACAAAAATAATT+TGG + chr2_2:51427817-51427836 None:intergenic 15.0%
!! TAATTAGCAAAGAAAAAAAA+CGG + chr2_2:51428843-51428862 None:intergenic 15.0%
!! AATACAATTTATCATACAAA+TGG + chr2_2:51429632-51429651 None:intergenic 15.0%
!!! AGTATTAAGTTTAGTTTAGA+TGG - chr2_2:51426407-51426426 Msa0256600:intron 20.0%
!!! GTATTAAGTTTAGTTTAGAT+GGG - chr2_2:51426408-51426427 Msa0256600:intron 20.0%
!! ATTTACTATTCACTCTTATA+TGG - chr2_2:51426851-51426870 Msa0256600:intron 20.0%
!!! CTCAGTATTGATTTTATAAT+TGG - chr2_2:51426979-51426998 Msa0256600:intron 20.0%
!! GTACATTTAACTGTTAAAAT+TGG - chr2_2:51427070-51427089 Msa0256600:CDS 20.0%
!!! AAAATGGTTTATTTTTCCAA+CGG - chr2_2:51427345-51427364 Msa0256600:intron 20.0%
!!! GCATTTAAAATGAACAATTT+AGG - chr2_2:51427405-51427424 Msa0256600:intron 20.0%
!! AAATTAACTTCTGATTAAGT+AGG - chr2_2:51427700-51427719 Msa0256600:intron 20.0%
!!! AATTTTAGTTTTGTGGTAAA+AGG + chr2_2:51427737-51427756 None:intergenic 20.0%
!! AGACAAAAGTTATTTGTAAT+TGG - chr2_2:51427860-51427879 Msa0256600:intron 20.0%
!! GAAACCATATTTAACATAAA+AGG - chr2_2:51427904-51427923 Msa0256600:intron 20.0%
!!! CAAACCTTTTATGTTAAATA+TGG + chr2_2:51427911-51427930 None:intergenic 20.0%
!! CATATTTAACATAAAAGGTT+TGG - chr2_2:51427909-51427928 Msa0256600:intron 20.0%
!!! TGAATTTTGAATAGATTCTT+TGG - chr2_2:51428178-51428197 Msa0256600:intron 20.0%
!!! GAATTTTGAATAGATTCTTT+GGG - chr2_2:51428179-51428198 Msa0256600:intron 20.0%
!!! AAAAACACATAAAAAGTACA+CGG + chr2_2:51428588-51428607 None:intergenic 20.0%
!!! TGTCATTTATATAATACATC+TGG - chr2_2:51429173-51429192 Msa0256600:CDS 20.0%
!!! ATTAGAACTTTCCAAAATTT+TGG - chr2_2:51430261-51430280 Msa0256600:five_prime_UTR 20.0%
!!! TCTGATCAAGTTTTTTAGAA+TGG + chr2_2:51425173-51425192 None:intergenic 25.0%
!! AATGTAAATAGTTCTATTCC+CGG - chr2_2:51425717-51425736 Msa0256600:CDS 25.0%
! AATGCGATGAAATTGAAAAA+AGG - chr2_2:51425859-51425878 Msa0256600:intron 25.0%
! ATGCGATGAAATTGAAAAAA+GGG - chr2_2:51425860-51425879 Msa0256600:intron 25.0%
!!! GTATTGATTTTATAATTGGG+TGG - chr2_2:51426983-51427002 Msa0256600:intron 25.0%
! AAATGTACTCTTATACAACT+TGG + chr2_2:51427098-51427117 None:intergenic 25.0%
! TTAGTTATTAGAGTACATAC+AGG - chr2_2:51427146-51427165 Msa0256600:intron 25.0%
! TTAAAATGAACAATTTAGGG+AGG - chr2_2:51427409-51427428 Msa0256600:intron 25.0%
!! GTTTGATATTTTCTTTGACA+AGG - chr2_2:51427478-51427497 Msa0256600:intron 25.0%
! ATATGTTGATGTCTTTACAA+TGG - chr2_2:51427654-51427673 Msa0256600:intron 25.0%
! AATCAGTTCAAAACTTTCAA+AGG + chr2_2:51427958-51427977 None:intergenic 25.0%
! CAATAAGGTATGAATCAAAT+AGG + chr2_2:51428054-51428073 None:intergenic 25.0%
! TGATTCATACCTTATTGTTA+TGG - chr2_2:51428057-51428076 Msa0256600:intron 25.0%
!!! CAAATTTTAATAACTACCAG+AGG + chr2_2:51428109-51428128 None:intergenic 25.0%
!! AAAACACATAAAAAGTACAC+GGG + chr2_2:51428587-51428606 None:intergenic 25.0%
!! TTCAATTTTTAATAGGGAAG+AGG + chr2_2:51428627-51428646 None:intergenic 25.0%
! AACTATATCTTGAATCAGAT+TGG + chr2_2:51428678-51428697 None:intergenic 25.0%
! GAGTTCTTTAATATCCTATA+GGG - chr2_2:51428772-51428791 Msa0256600:CDS 25.0%
! TCAAATCACAAGAAAATTAC+TGG - chr2_2:51429360-51429379 Msa0256600:CDS 25.0%
! CAGTAAATCATTAAATTACC+TGG + chr2_2:51429389-51429408 None:intergenic 25.0%
! CAGGTAATTTAATGATTTAC+TGG - chr2_2:51429387-51429406 Msa0256600:CDS 25.0%
! AATCATAAGCATCATAACTT+TGG + chr2_2:51429425-51429444 None:intergenic 25.0%
!! ATTTTTCCAGATGTATACAT+GGG + chr2_2:51429788-51429807 None:intergenic 25.0%
! TTTACAGTGAAAATGTTCAT+AGG + chr2_2:51429860-51429879 None:intergenic 25.0%
! ATAGTCATACACATATTCTA+TGG + chr2_2:51430310-51430329 None:intergenic 25.0%
! AGTGAGATTTGTAATATTAG+CGG - chr2_2:51430420-51430439 Msa0256600:five_prime_UTR 25.0%
AATGAGTTAAGGTTTGTGTA+TGG + chr2_2:51425077-51425096 None:intergenic 30.0%
TGTGAAGAATGAATGAGTTA+AGG + chr2_2:51425088-51425107 None:intergenic 30.0%
TTTGAGAGAGATTTAAGAGA+GGG + chr2_2:51425117-51425136 None:intergenic 30.0%
ATTTGAGAGAGATTTAAGAG+AGG + chr2_2:51425118-51425137 None:intergenic 30.0%
!!! AGTATTTTGAGATCCAATTG+GGG + chr2_2:51425150-51425169 None:intergenic 30.0%
!!! GAGTATTTTGAGATCCAATT+GGG + chr2_2:51425151-51425170 None:intergenic 30.0%
!!! AAGGGCATTTTCATTGAAAT+GGG - chr2_2:51425232-51425251 Msa0256600:CDS 30.0%
TCTTCTTGAGAAATGAGAAT+GGG + chr2_2:51425309-51425328 None:intergenic 30.0%
ATTCGTAGAAGAAATCTTGT+TGG + chr2_2:51425368-51425387 None:intergenic 30.0%
!!! TGTTGTTGTTGTTGTTTTCT+TGG + chr2_2:51425464-51425483 None:intergenic 30.0%
CCATATATCGTAACTGTTAA+GGG + chr2_2:51425508-51425527 None:intergenic 30.0%
TCCATATATCGTAACTGTTA+AGG + chr2_2:51425509-51425528 None:intergenic 30.0%
AGTAGAAGAAGAGATAAAAC+AGG + chr2_2:51425694-51425713 None:intergenic 30.0%
! TCTTCTAGAAGAATTCTTTC+CGG + chr2_2:51425775-51425794 None:intergenic 30.0%
ACCATAAGAGATCTTGATAA+TGG - chr2_2:51425897-51425916 Msa0256600:intron 30.0%
TCCATTATCAAGATCTCTTA+TGG + chr2_2:51425901-51425920 None:intergenic 30.0%
!! AAGCTCATAATGGATCAATT+TGG - chr2_2:51426384-51426403 Msa0256600:intron 30.0%
ATCATGCAAATGACCTTTAA+AGG + chr2_2:51426720-51426739 None:intergenic 30.0%
!!! TTAGCTTCTGTTTTTTGGAT+AGG - chr2_2:51426771-51426790 Msa0256600:intron 30.0%
!! TTGGATAGGTCTTTTTGTTT+TGG - chr2_2:51426785-51426804 Msa0256600:intron 30.0%
ATGTACACTTATATGCAACT+TGG + chr2_2:51427056-51427075 None:intergenic 30.0%
AAATTTGAGTCTGATTGAGT+AGG + chr2_2:51427295-51427314 None:intergenic 30.0%
!! CGTTTTTAATGGGTCTAAAA+TGG - chr2_2:51427329-51427348 Msa0256600:intron 30.0%
! TTTTCTTTGACAAGGAAACA+TGG - chr2_2:51427486-51427505 Msa0256600:intron 30.0%
AAGATGTCTGTTGAATAAAG+CGG - chr2_2:51427568-51427587 Msa0256600:intron 30.0%
AATAAAGCGGTAACTTACTT+AGG - chr2_2:51427581-51427600 Msa0256600:intron 30.0%
TAGGATGGTTATTTGTAACT+TGG - chr2_2:51427600-51427619 Msa0256600:intron 30.0%
AGGATGGTTATTTGTAACTT+GGG - chr2_2:51427601-51427620 Msa0256600:intron 30.0%
!!! TTAGTTTTGTGGTAAAAGGA+TGG + chr2_2:51427733-51427752 None:intergenic 30.0%
AGAGGATGTTTATGTAAACT+AGG - chr2_2:51428017-51428036 Msa0256600:intron 30.0%
TGCGAAGTATAAACATTACA+AGG + chr2_2:51428351-51428370 None:intergenic 30.0%
!!! ATTTTTTCACACAGTGACTA+TGG - chr2_2:51428450-51428469 Msa0256600:intron 30.0%
TATATACATGCACATTAGAG+TGG + chr2_2:51428554-51428573 None:intergenic 30.0%
ATCTTGAATCAGATTGGATA+GGG + chr2_2:51428672-51428691 None:intergenic 30.0%
TATCTTGAATCAGATTGGAT+AGG + chr2_2:51428673-51428692 None:intergenic 30.0%
! AATTGTGCTTTTCGCATAAT+TGG + chr2_2:51428708-51428727 None:intergenic 30.0%
TATTTGTCTTCACTGCATAT+AGG - chr2_2:51428737-51428756 Msa0256600:intron 30.0%
GGAGTTCTTTAATATCCTAT+AGG - chr2_2:51428771-51428790 Msa0256600:CDS 30.0%
TTCTTTAATATCCTATAGGG+TGG - chr2_2:51428775-51428794 Msa0256600:CDS 30.0%
!! CTAAATTTTAACCACCCTAT+AGG + chr2_2:51428789-51428808 None:intergenic 30.0%
CTATAGGGTGGTTAAAATTT+AGG - chr2_2:51428787-51428806 Msa0256600:CDS 30.0%
TAGCAAAGAAAAAAAACGGA+GGG + chr2_2:51428839-51428858 None:intergenic 30.0%
TTAGCAAAGAAAAAAAACGG+AGG + chr2_2:51428840-51428859 None:intergenic 30.0%
AAGCAGATAGAAACGAAAAA+AGG + chr2_2:51428868-51428887 None:intergenic 30.0%
TATCATCAACAGGATTAAAC+TGG + chr2_2:51428915-51428934 None:intergenic 30.0%
! ATGAAGTATCTATCATCAAC+AGG + chr2_2:51428925-51428944 None:intergenic 30.0%
GATGATAGATACTTCATTAG+TGG - chr2_2:51428928-51428947 Msa0256600:CDS 30.0%
! ATACTTCATTAGTGGATCTT+TGG - chr2_2:51428936-51428955 Msa0256600:CDS 30.0%
!! TGAATTTCTGAAGTCTGAAA+TGG + chr2_2:51429086-51429105 None:intergenic 30.0%
TTAGTTAAATTGTCTGTGCA+GGG - chr2_2:51429122-51429141 Msa0256600:CDS 30.0%
ATACTCTATTCTGACAATTG+TGG - chr2_2:51429248-51429267 Msa0256600:CDS 30.0%
AAAAACAAGATGTTAACCAG+TGG + chr2_2:51429274-51429293 None:intergenic 30.0%
! GATCTGGTTCATAAGTTTAA+AGG - chr2_2:51429544-51429563 Msa0256600:CDS 30.0%
!! ATATTTACCATTTGCTGTGA+GGG + chr2_2:51429743-51429762 None:intergenic 30.0%
!! TATATTTACCATTTGCTGTG+AGG + chr2_2:51429744-51429763 None:intergenic 30.0%
! CATTTTTCCAGATGTATACA+TGG + chr2_2:51429789-51429808 None:intergenic 30.0%
TCAGTATGGATTTCACAAAT+GGG - chr2_2:51430178-51430197 Msa0256600:CDS 30.0%
GTGAGATTTGTAATATTAGC+GGG - chr2_2:51430421-51430440 Msa0256600:five_prime_UTR 30.0%
TGAGATTTGTAATATTAGCG+GGG - chr2_2:51430422-51430441 Msa0256600:five_prime_UTR 30.0%
!!! GTATTTTGAGATCCAATTGG+GGG + chr2_2:51425149-51425168 None:intergenic 35.0%
!!! GGAGTATTTTGAGATCCAAT+TGG + chr2_2:51425152-51425171 None:intergenic 35.0%
!!! GAAGGGCATTTTCATTGAAA+TGG - chr2_2:51425231-51425250 Msa0256600:CDS 35.0%
TTGAGATTGAGATTGGGATT+GGG + chr2_2:51425262-51425281 None:intergenic 35.0%
!!! GGTTTGTTCATGGTTTTAAG+GGG + chr2_2:51425288-51425307 None:intergenic 35.0%
!!! GGGTTTGTTCATGGTTTTAA+GGG + chr2_2:51425289-51425308 None:intergenic 35.0%
!! TGGGTTTGTTCATGGTTTTA+AGG + chr2_2:51425290-51425309 None:intergenic 35.0%
! AATGAGAATGGGTTTGTTCA+TGG + chr2_2:51425298-51425317 None:intergenic 35.0%
GTCTTCTTGAGAAATGAGAA+TGG + chr2_2:51425310-51425329 None:intergenic 35.0%
! AATCTTGTTGGTCTAGTTGT+TGG + chr2_2:51425356-51425375 None:intergenic 35.0%
CCCTTAACAGTTACGATATA+TGG - chr2_2:51425505-51425524 Msa0256600:CDS 35.0%
ACTCGTCTTCTTCAAACTAT+TGG - chr2_2:51425561-51425580 Msa0256600:CDS 35.0%
ATATTCCGATCCAAATCTGA+CGG - chr2_2:51425639-51425658 Msa0256600:CDS 35.0%
! TCTTCTAGAAGAAGTCATTC+CGG - chr2_2:51425783-51425802 Msa0256600:CDS 35.0%
AGCAAAGTAGAAGAATTACC+CGG + chr2_2:51425822-51425841 None:intergenic 35.0%
GTGAAAGAAGTTAGAGAAGA+TGG - chr2_2:51425933-51425952 Msa0256600:intron 35.0%
AAGTTAGAGAAGATGGAATG+TGG - chr2_2:51425940-51425959 Msa0256600:intron 35.0%
TGGAATGTGGAATAAAGTGA+AGG - chr2_2:51425953-51425972 Msa0256600:intron 35.0%
AATGTGGAATAAAGTGAAGG+AGG - chr2_2:51425956-51425975 Msa0256600:intron 35.0%
! TATGGAGGAATTTGAGATGA+CGG - chr2_2:51426001-51426020 Msa0256600:CDS 35.0%
!! TGTTCTAAGGGGAAAAAGAA+AGG - chr2_2:51426131-51426150 Msa0256600:intron 35.0%
CAAGAGATTCAAGCTCATAA+TGG - chr2_2:51426374-51426393 Msa0256600:intron 35.0%
AGGATTGTGTGATTCATGTT+TGG - chr2_2:51426453-51426472 Msa0256600:intron 35.0%
! ATGACCTTTAAAGGAGCAAA+CGG + chr2_2:51426711-51426730 None:intergenic 35.0%
!!! TCAGGTTAGCTTCTGTTTTT+TGG - chr2_2:51426766-51426785 Msa0256600:intron 35.0%
!!! CATCGTTGGCTTTTGTTAAA+AGG - chr2_2:51426874-51426893 Msa0256600:intron 35.0%
AAGCCAATTCATCAGTTCAT+CGG + chr2_2:51426914-51426933 None:intergenic 35.0%
!! AGTTTTAGTGACTCTCCTTT+CGG - chr2_2:51427178-51427197 Msa0256600:intron 35.0%
AGTCTTAAAAACCTGTACTG+TGG - chr2_2:51427213-51427232 Msa0256600:intron 35.0%
GTCTTAAAAACCTGTACTGT+GGG - chr2_2:51427214-51427233 Msa0256600:intron 35.0%
TGTCACAGTGAAAAGATTTC+TGG - chr2_2:51427253-51427272 Msa0256600:intron 35.0%
GGATGGTTATTTGTAACTTG+GGG - chr2_2:51427602-51427621 Msa0256600:intron 35.0%
! TCAAACACATTTGTTGAGCT+GGG + chr2_2:51427771-51427790 None:intergenic 35.0%
! TTCAAACACATTTGTTGAGC+TGG + chr2_2:51427772-51427791 None:intergenic 35.0%
TCGTAACATTGAATGTGAAG+TGG + chr2_2:51427839-51427858 None:intergenic 35.0%
AGGTTTGGATCCTATTAAAG+AGG - chr2_2:51427924-51427943 Msa0256600:intron 35.0%
GGTTTGGATCCTATTAAAGA+GGG - chr2_2:51427925-51427944 Msa0256600:intron 35.0%
GTTTGGATCCTATTAAAGAG+GGG - chr2_2:51427926-51427945 Msa0256600:intron 35.0%
!!! GGTTTTTTCCCCTCTTTAAT+AGG + chr2_2:51427937-51427956 None:intergenic 35.0%
TCTCCAATGTAAACTAAAGG+GGG + chr2_2:51428000-51428019 None:intergenic 35.0%
CTCTCCAATGTAAACTAAAG+GGG + chr2_2:51428001-51428020 None:intergenic 35.0%
CCTCTCCAATGTAAACTAAA+GGG + chr2_2:51428002-51428021 None:intergenic 35.0%
TCCTCTCCAATGTAAACTAA+AGG + chr2_2:51428003-51428022 None:intergenic 35.0%
CCTTATTGTTATGGTAACAC+CGG - chr2_2:51428066-51428085 Msa0256600:intron 35.0%
TTTGAATAGATTCTTTGGGC+AGG - chr2_2:51428183-51428202 Msa0256600:intron 35.0%
TTGAATAGATTCTTTGGGCA+GGG - chr2_2:51428184-51428203 Msa0256600:intron 35.0%
TACAAGGATGATCTAAACAC+TGG + chr2_2:51428335-51428354 None:intergenic 35.0%
TGCATATAGGACAAGTTAAC+AGG - chr2_2:51428750-51428769 Msa0256600:intron 35.0%
CTTAGTTAAATTGTCTGTGC+AGG - chr2_2:51429121-51429140 Msa0256600:CDS 35.0%
!! CAAGAAAATTACTGGTTTCC+AGG - chr2_2:51429368-51429387 Msa0256600:CDS 35.0%
TCAGTTTGATCAGCACAAAT+TGG + chr2_2:51429671-51429690 None:intergenic 35.0%
AACTGATGTAAGTTTCTTGC+AGG - chr2_2:51429685-51429704 Msa0256600:CDS 35.0%
ATATATTGTTGCTGCAAGTG+AGG - chr2_2:51429759-51429778 Msa0256600:CDS 35.0%
! GACATGCATGATACATTTTC+TGG - chr2_2:51429925-51429944 Msa0256600:CDS 35.0%
TCGATAGAATTTCTGCAACA+TGG - chr2_2:51430109-51430128 Msa0256600:CDS 35.0%
! GCTAGAAGAAGTTTTTCTTC+CGG + chr2_2:51430135-51430154 None:intergenic 35.0%
GTCAGTATGGATTTCACAAA+TGG - chr2_2:51430177-51430196 Msa0256600:CDS 35.0%
CAGTATGGATTTCACAAATG+GGG - chr2_2:51430179-51430198 Msa0256600:CDS 35.0%
TAAGTCAAAAAATGTCAGCC+TGG - chr2_2:51430202-51430221 Msa0256600:CDS 35.0%
AAGTCAAAAAATGTCAGCCT+GGG - chr2_2:51430203-51430222 Msa0256600:CDS 35.0%
! GAAGTGGCAATCCAAAATTT+TGG + chr2_2:51430275-51430294 None:intergenic 35.0%
ATGGTCTCTTATATTCGAAG+TGG + chr2_2:51430291-51430310 None:intergenic 35.0%
TGTATGACTATATGTCACAG+CGG - chr2_2:51430319-51430338 Msa0256600:five_prime_UTR 35.0%
TTCCTTGTTCTTGTGCTTAT+TGG - chr2_2:51430455-51430474 Msa0256600:five_prime_UTR 35.0%
ATCCAATAAGCACAAGAACA+AGG + chr2_2:51430460-51430479 None:intergenic 35.0%
TGTGCTTATTGGATGAAGAT+AGG - chr2_2:51430466-51430485 Msa0256600:five_prime_UTR 35.0%
GTTTGTGTATGGTGAGAGAT+TGG + chr2_2:51425066-51425085 None:intergenic 40.0%
AAATTTCACACTCCCCCAAT+TGG - chr2_2:51425134-51425153 Msa0256600:three_prime_UTR 40.0%
AACCACACTAACATTTGCTC+AGG - chr2_2:51425208-51425227 Msa0256600:exon 40.0%
ACCACACTAACATTTGCTCA+GGG - chr2_2:51425209-51425228 Msa0256600:exon 40.0%
ACTAACATTTGCTCAGGGAA+GGG - chr2_2:51425214-51425233 Msa0256600:exon 40.0%
GTTGAGATTGAGATTGGGAT+TGG + chr2_2:51425263-51425282 None:intergenic 40.0%
GGGTTGTTGAGATTGAGATT+GGG + chr2_2:51425268-51425287 None:intergenic 40.0%
! GTTGATGTTGTTGTTGGAGT+TGG + chr2_2:51425332-51425351 None:intergenic 40.0%
!! GTTGGTGTTGATGTTGTTGT+TGG + chr2_2:51425338-51425357 None:intergenic 40.0%
AAGAGGAGAGAGAGAGTAAA+CGG + chr2_2:51425398-51425417 None:intergenic 40.0%
! TTTCTTGGTCTTCGTCTTCT+TGG + chr2_2:51425449-51425468 None:intergenic 40.0%
GGAATATGGCATTGTAAGGT+GGG + chr2_2:51425626-51425645 None:intergenic 40.0%
GATCGGAATATGGCATTGTA+AGG + chr2_2:51425630-51425649 None:intergenic 40.0%
GTCAGATTTGGATCGGAATA+TGG + chr2_2:51425640-51425659 None:intergenic 40.0%
TATGACCGTCAGATTTGGAT+CGG + chr2_2:51425647-51425666 None:intergenic 40.0%
GTTGTTATGACCGTCAGATT+TGG + chr2_2:51425652-51425671 None:intergenic 40.0%
AGTTCTATTCCCGGTAATTC+TGG - chr2_2:51425726-51425745 Msa0256600:CDS 40.0%
CTAGAAGAATTCTTTCCGGA+CGG + chr2_2:51425771-51425790 None:intergenic 40.0%
GGGTAATTCTTCTACTTTGC+TGG - chr2_2:51425821-51425840 Msa0256600:intron 40.0%
TTCTTCTACTTTGCTGGACA+CGG - chr2_2:51425827-51425846 Msa0256600:intron 40.0%
TGGAATAAAGTGAAGGAGGT+TGG - chr2_2:51425960-51425979 Msa0256600:intron 40.0%
GGAAATGGGAGTAATGGTAA+TGG - chr2_2:51426104-51426123 Msa0256600:intron 40.0%
!! AATGGGAGTAATGGTAATGG+AGG - chr2_2:51426107-51426126 Msa0256600:intron 40.0%
!! TGGTAATGGAGGTTGTTCTA+AGG - chr2_2:51426118-51426137 Msa0256600:intron 40.0%
!! GGTAATGGAGGTTGTTCTAA+GGG - chr2_2:51426119-51426138 Msa0256600:intron 40.0%
! GTAATGGAGGTTGTTCTAAG+GGG - chr2_2:51426120-51426139 Msa0256600:intron 40.0%
TCTAAGGGGAAAAAGAAAGG+AGG - chr2_2:51426134-51426153 Msa0256600:intron 40.0%
CTAAGGGGAAAAAGAAAGGA+GGG - chr2_2:51426135-51426154 Msa0256600:intron 40.0%
!! CAAGAGTGTTGCTAGTTCAA+TGG - chr2_2:51426175-51426194 Msa0256600:CDS 40.0%
TAGTTCAATGGCAGGTCATA+AGG - chr2_2:51426187-51426206 Msa0256600:CDS 40.0%
TGATGAGAGAGATACTTCGT+CGG - chr2_2:51426223-51426242 Msa0256600:intron 40.0%
CTACGGATGATAGTCAAGAT+GGG - chr2_2:51426273-51426292 Msa0256600:intron 40.0%
AGTCAAGATGGGTCATTTCA+TGG - chr2_2:51426284-51426303 Msa0256600:intron 40.0%
TTGTGTGATTCATGTTTGGC+AGG - chr2_2:51426457-51426476 Msa0256600:intron 40.0%
! GTTGTTGCTTATGGAGAAAC+AGG - chr2_2:51426505-51426524 Msa0256600:CDS 40.0%
! ATTTCTTGTTAATGGGTCGC+CGG - chr2_2:51426550-51426569 Msa0256600:CDS 40.0%
ACTCAACGACTTCCTACTAA+CGG + chr2_2:51426639-51426658 None:intergenic 40.0%
TAGTAGGAAGTCGTTGAGTT+TGG - chr2_2:51426640-51426659 Msa0256600:intron 40.0%
AGTGAGTGCAAACACATGTT+CGG + chr2_2:51426681-51426700 None:intergenic 40.0%
AAACCCGTTTGCTCCTTTAA+AGG - chr2_2:51426704-51426723 Msa0256600:intron 40.0%
! TGACCTTTAAAGGAGCAAAC+GGG + chr2_2:51426710-51426729 None:intergenic 40.0%
TCACTCTTATATGGCATCGT+TGG - chr2_2:51426860-51426879 Msa0256600:intron 40.0%
TGACCGATGAACTGATGAAT+TGG - chr2_2:51426908-51426927 Msa0256600:intron 40.0%
!! TGGGTGGAATTGTTTTCAAG+TGG - chr2_2:51426999-51427018 Msa0256600:intron 40.0%
!!! TTGTTTTCAAGTGGCTGAAC+AGG - chr2_2:51427008-51427027 Msa0256600:intron 40.0%
ACTGCAATAATGCAACCGAA+AGG + chr2_2:51427196-51427215 None:intergenic 40.0%
TTGTGATTCTAGGCCTTTCT+TGG - chr2_2:51427375-51427394 Msa0256600:intron 40.0%
AAATGCCGTCTTTCCAAGAA+AGG + chr2_2:51427391-51427410 None:intergenic 40.0%
TGCTTTAGTGAACTGTGATG+TGG - chr2_2:51427538-51427557 Msa0256600:intron 40.0%
AAGCGGTAACTTACTTAGGA+TGG - chr2_2:51427585-51427604 Msa0256600:intron 40.0%
TGGTTATTTGTAACTTGGGG+TGG - chr2_2:51427605-51427624 Msa0256600:intron 40.0%
GGTTATTTGTAACTTGGGGT+GGG - chr2_2:51427606-51427625 Msa0256600:intron 40.0%
GTTATTTGTAACTTGGGGTG+GGG - chr2_2:51427607-51427626 Msa0256600:intron 40.0%
! CAAACACATTTGTTGAGCTG+GGG + chr2_2:51427770-51427789 None:intergenic 40.0%
GTAAACTAAAGGGGGAAGTT+TGG + chr2_2:51427992-51428011 None:intergenic 40.0%
! CTTCCCCCTTTAGTTTACAT+TGG - chr2_2:51427994-51428013 Msa0256600:intron 40.0%
! CCCTTTAGTTTACATTGGAG+AGG - chr2_2:51427999-51428018 Msa0256600:intron 40.0%
!! CCGGTGTTACCATAACAATA+AGG + chr2_2:51428069-51428088 None:intergenic 40.0%
TATTGTTATGGTAACACCGG+TGG - chr2_2:51428069-51428088 Msa0256600:intron 40.0%
ATTGTTATGGTAACACCGGT+GGG - chr2_2:51428070-51428089 Msa0256600:intron 40.0%
TGAATAGATTCTTTGGGCAG+GGG - chr2_2:51428185-51428204 Msa0256600:intron 40.0%
CTTCAATGGACAAAACAGTG+CGG - chr2_2:51428394-51428413 Msa0256600:intron 40.0%
ATGACTGCAACTCAGGTTTA+GGG + chr2_2:51428526-51428545 None:intergenic 40.0%
GAATCAGATTGGATAGGGAT+AGG + chr2_2:51428667-51428686 None:intergenic 40.0%
AAAAAAAACGGAGGGAACGA+GGG + chr2_2:51428831-51428850 None:intergenic 40.0%
GTTTCTATCTGCTTTCTGTC+TGG - chr2_2:51428874-51428893 Msa0256600:CDS 40.0%
! TAGTGGATCTTTGGATGCTA+AGG - chr2_2:51428945-51428964 Msa0256600:CDS 40.0%
CAATCAACAACTTGTCGATC+CGG + chr2_2:51428988-51429007 None:intergenic 40.0%
TTGGATCGATCTTCATGAGA+TGG - chr2_2:51429005-51429024 Msa0256600:CDS 40.0%
TTGTTATACACCTGATGGTC+AGG - chr2_2:51429038-51429057 Msa0256600:CDS 40.0%
! TGCACTAGTTGGTTCATACA+AGG - chr2_2:51429145-51429164 Msa0256600:CDS 40.0%
! GCACTAGTTGGTTCATACAA+GGG - chr2_2:51429146-51429165 Msa0256600:CDS 40.0%
AATACATCTGGTACTGTCAG+AGG - chr2_2:51429185-51429204 Msa0256600:CDS 40.0%
! TTTTATGAACAGTTTGCCCC+AGG - chr2_2:51429460-51429479 Msa0256600:CDS 40.0%
TACTTCTGATGAACTTCCTG+GGG + chr2_2:51429479-51429498 None:intergenic 40.0%
GTACTTCTGATGAACTTCCT+GGG + chr2_2:51429480-51429499 None:intergenic 40.0%
AGTACTTCTGATGAACTTCC+TGG + chr2_2:51429481-51429500 None:intergenic 40.0%
!! CATCTGCTGATTCTCGAATA+CGG - chr2_2:51429506-51429525 Msa0256600:CDS 40.0%
!! ATCTGCTGATTCTCGAATAC+GGG - chr2_2:51429507-51429526 Msa0256600:CDS 40.0%
!! GGTTGTTGATGGTATTGATC+TGG - chr2_2:51429528-51429547 Msa0256600:CDS 40.0%
AGGATTCCCATGTATACATC+TGG - chr2_2:51429779-51429798 Msa0256600:CDS 40.0%
GTGACACCTTTACTTCTGTT+GGG + chr2_2:51429826-51429845 None:intergenic 40.0%
ATGTTCATAGGACTGTGTCA+CGG + chr2_2:51429848-51429867 None:intergenic 40.0%
! AAGTTTTCCTCTACAGGTGT+AGG + chr2_2:51430006-51430025 None:intergenic 40.0%
ACACCTGTAGAGGAAAACTT+CGG - chr2_2:51430006-51430025 Msa0256600:CDS 40.0%
TAGAATTTCTGCAACATGGC+CGG - chr2_2:51430113-51430132 Msa0256600:CDS 40.0%
TGAAATCCATACTGACACGA+GGG + chr2_2:51430173-51430192 None:intergenic 40.0%
AGTCAAAAAATGTCAGCCTG+GGG - chr2_2:51430204-51430223 Msa0256600:CDS 40.0%
! TTTTTGCCAGCTTATGGAGA+AGG + chr2_2:51430384-51430403 None:intergenic 40.0%
! TACAGGTTTTTGCCAGCTTA+TGG + chr2_2:51430390-51430409 None:intergenic 40.0%
!! TCTCACTCACTTTTCTGTAC+AGG + chr2_2:51430407-51430426 None:intergenic 40.0%
TCCCTGAGCAAATGTTAGTG+TGG + chr2_2:51425213-51425232 None:intergenic 45.0%
CACTAACATTTGCTCAGGGA+AGG - chr2_2:51425213-51425232 Msa0256600:exon 45.0%
GGGGTTGTTGAGATTGAGAT+TGG + chr2_2:51425269-51425288 None:intergenic 45.0%
TTCTTGGTCAGAGTTGGAGT+TGG + chr2_2:51425433-51425452 None:intergenic 45.0%
TTCGTCTTCTTGGTCAGAGT+TGG + chr2_2:51425439-51425458 None:intergenic 45.0%
!! ACGAGTACGACGTTCTGAAA+CGG + chr2_2:51425547-51425566 None:intergenic 45.0%
ACCACGTGAAAGGGCAAAAT+CGG + chr2_2:51425595-51425614 None:intergenic 45.0%
GATTGGGTTACCACGTGAAA+GGG + chr2_2:51425604-51425623 None:intergenic 45.0%
TGGCATTGTAAGGTGGGATT+GGG + chr2_2:51425620-51425639 None:intergenic 45.0%
ATGGCATTGTAAGGTGGGAT+TGG + chr2_2:51425621-51425640 None:intergenic 45.0%
CGGAATATGGCATTGTAAGG+TGG + chr2_2:51425627-51425646 None:intergenic 45.0%
TCTATTCCCGGTAATTCTGG+CGG - chr2_2:51425729-51425748 Msa0256600:CDS 45.0%
!! TTCCGGTGTTGATTTCTTGC+CGG - chr2_2:51425800-51425819 Msa0256600:CDS 45.0%
TCTTCTACTTTGCTGGACAC+GGG - chr2_2:51425828-51425847 Msa0256600:intron 45.0%
!! AAAGTGAAGGAGGTTGGTAC+TGG - chr2_2:51425966-51425985 Msa0256600:CDS 45.0%
!! AAGTGAAGGAGGTTGGTACT+GGG - chr2_2:51425967-51425986 Msa0256600:CDS 45.0%
TACTGGGAGACAGTTGACTA+TGG - chr2_2:51425983-51426002 Msa0256600:CDS 45.0%
! GAGGAATTTGAGATGACGGT+TGG - chr2_2:51426005-51426024 Msa0256600:CDS 45.0%
! GGTGTTGGAAATGGGAGTAA+TGG - chr2_2:51426098-51426117 Msa0256600:intron 45.0%
GGAAAAAGAAAGGAGGGAGT+TGG - chr2_2:51426141-51426160 Msa0256600:CDS 45.0%
! AGTGTTGCTAGTTCAATGGC+AGG - chr2_2:51426179-51426198 Msa0256600:CDS 45.0%
AGAGATACTTCGTCGGAGAA+AGG - chr2_2:51426230-51426249 Msa0256600:intron 45.0%
GCTACGGATGATAGTCAAGA+TGG - chr2_2:51426272-51426291 Msa0256600:intron 45.0%
GTCATTTCATGGACCTGAGA+GGG - chr2_2:51426295-51426314 Msa0256600:intron 45.0%
AGGGTGAGAGTGAGACAATA+TGG - chr2_2:51426314-51426333 Msa0256600:intron 45.0%
GGGTGAGAGTGAGACAATAT+GGG - chr2_2:51426315-51426334 Msa0256600:intron 45.0%
GGGAAATATCTTGCTAGTGC+TGG - chr2_2:51426428-51426447 Msa0256600:intron 45.0%
!! ATATCTTGCTAGTGCTGGTG+AGG - chr2_2:51426433-51426452 Msa0256600:intron 45.0%
GATTCATGTTTGGCAGGTTG+TGG - chr2_2:51426463-51426482 Msa0256600:intron 45.0%
TTGTGGAGTCTGAGAGGAAA+GGG - chr2_2:51426480-51426499 Msa0256600:CDS 45.0%
! GAAAGGGGAGTTGTTGCTTA+TGG - chr2_2:51426496-51426515 Msa0256600:CDS 45.0%
GTTGCTTATGGAGAAACAGG+AGG - chr2_2:51426508-51426527 Msa0256600:CDS 45.0%
! TCCTTTGGCGGATAATCTTC+TGG - chr2_2:51426589-51426608 Msa0256600:CDS 45.0%
TCCAGAAGATTATCCGCCAA+AGG + chr2_2:51426593-51426612 None:intergenic 45.0%
! TCTTCTGGAGAGGAAGAGAA+AGG - chr2_2:51426604-51426623 Msa0256600:CDS 45.0%
! CTTCTGGAGAGGAAGAGAAA+GGG - chr2_2:51426605-51426624 Msa0256600:CDS 45.0%
! TTCTGGAGAGGAAGAGAAAG+GGG - chr2_2:51426606-51426625 Msa0256600:CDS 45.0%
GTTGAGTTTGGACCAGTTTG+TGG - chr2_2:51426652-51426671 Msa0256600:intron 45.0%
GTGAGTGCAAACACATGTTC+GGG + chr2_2:51426680-51426699 None:intergenic 45.0%
ATGATGTGCTTGACCTCTCT+TGG - chr2_2:51426735-51426754 Msa0256600:intron 45.0%
! GCTGAGTGTTTTCGATGACT+TGG - chr2_2:51426812-51426831 Msa0256600:intron 45.0%
GAATCACAACGTAACTCCGT+TGG + chr2_2:51427364-51427383 None:intergenic 45.0%
CGGAGTTACGTTGTGATTCT+AGG - chr2_2:51427365-51427384 Msa0256600:intron 45.0%
CTAGGCCTTTCTTGGAAAGA+CGG - chr2_2:51427383-51427402 Msa0256600:intron 45.0%
GAGGCAACTTACACACAACA+TGG - chr2_2:51427428-51427447 Msa0256600:intron 45.0%
TTCTTTGGGCAGGGGTTTAT+TGG - chr2_2:51428193-51428212 Msa0256600:intron 45.0%
GCACTTGCTCTCATCTTCAA+TGG - chr2_2:51428380-51428399 Msa0256600:intron 45.0%
CATGACTGCAACTCAGGTTT+AGG + chr2_2:51428527-51428546 None:intergenic 45.0%
AACCTGAGTTGCAGTCATGT+AGG - chr2_2:51428528-51428547 Msa0256600:intron 45.0%
GAAAAAAAACGGAGGGAACG+AGG + chr2_2:51428832-51428851 None:intergenic 45.0%
TGGATGCTAAGGTTCGCATA+TGG - chr2_2:51428956-51428975 Msa0256600:CDS 45.0%
CGGATCGACAAGTTGTTGAT+TGG - chr2_2:51428986-51429005 Msa0256600:CDS 45.0%
!! GCTGCTTGTTATACACCTGA+TGG - chr2_2:51429033-51429052 Msa0256600:CDS 45.0%
TATACACCTGATGGTCAGGT+TGG - chr2_2:51429042-51429061 Msa0256600:CDS 45.0%
ATTCTGACAATTGTGGCCAC+TGG - chr2_2:51429255-51429274 Msa0256600:CDS 45.0%
! TCTCGAATACGGGTTGTTGA+TGG - chr2_2:51429517-51429536 Msa0256600:CDS 45.0%
!! TTTACCATTTGCTGTGAGGG+AGG + chr2_2:51429740-51429759 None:intergenic 45.0%
GGAAAAATGAAGCCGATTGC+AGG - chr2_2:51429800-51429819 Msa0256600:CDS 45.0%
GGTGACACCTTTACTTCTGT+TGG + chr2_2:51429827-51429846 None:intergenic 45.0%
GTCGTTGTTGCTATCAAGCT+CGG + chr2_2:51429959-51429978 None:intergenic 45.0%
TACAGGTGTAGGAGGATGAT+TGG + chr2_2:51429995-51430014 None:intergenic 45.0%
! TTTTCCTCTACAGGTGTAGG+AGG + chr2_2:51430003-51430022 None:intergenic 45.0%
! ACACCGAAGTTTTCCTCTAC+AGG + chr2_2:51430012-51430031 None:intergenic 45.0%
GTGAAATCCATACTGACACG+AGG + chr2_2:51430174-51430193 None:intergenic 45.0%
AAAAATGTCAGCCTGGGGTA+TGG - chr2_2:51430209-51430228 Msa0256600:CDS 45.0%
AGTAACAATCACCATACCCC+AGG + chr2_2:51430223-51430242 None:intergenic 45.0%
GGTATGGTGATTGTTACTGC+TGG - chr2_2:51430225-51430244 Msa0256600:exon 45.0%
!! ATTGTTACTGCTGGTCTTCG+AGG - chr2_2:51430234-51430253 Msa0256600:five_prime_UTR 45.0%
!! CGAGTTGATATCAGCTCAGA+AGG - chr2_2:51430346-51430365 Msa0256600:five_prime_UTR 45.0%
AGATCACCTTCTCCATAAGC+TGG - chr2_2:51430375-51430394 Msa0256600:five_prime_UTR 45.0%
! AGAGATTGGAGCGAGGTGTT+GGG + chr2_2:51425052-51425071 None:intergenic 50.0%
TATGGTGAGAGATTGGAGCG+AGG + chr2_2:51425059-51425078 None:intergenic 50.0%
GTTGGAACAAGAGCAGGAAG+AGG + chr2_2:51425415-51425434 None:intergenic 50.0%
GTTGGAGTTGGAACAAGAGC+AGG + chr2_2:51425421-51425440 None:intergenic 50.0%
!! CGACGTTCTGAAACGGAAGA+AGG + chr2_2:51425540-51425559 None:intergenic 50.0%
! TCCGATTTTGCCCTTTCACG+TGG - chr2_2:51425591-51425610 Msa0256600:CDS 50.0%
GGATTGGGTTACCACGTGAA+AGG + chr2_2:51425605-51425624 None:intergenic 50.0%
GAAGAATTCTTTCCGGACGG+AGG + chr2_2:51425768-51425787 None:intergenic 50.0%
!! TCCGGTGTTGATTTCTTGCC+GGG - chr2_2:51425801-51425820 Msa0256600:CDS 50.0%
ACCCGGCAAGAAATCAACAC+CGG + chr2_2:51425805-51425824 None:intergenic 50.0%
TGGGAGACAGTTGACTATGG+AGG - chr2_2:51425986-51426005 Msa0256600:CDS 50.0%
TGGTCAATCTCCGATTGTGC+AGG - chr2_2:51426025-51426044 Msa0256600:CDS 50.0%
CGCATAAGCTCCTGCACAAT+CGG + chr2_2:51426038-51426057 None:intergenic 50.0%
CAATGGCAGGTCATAAGGAG+AGG - chr2_2:51426192-51426211 Msa0256600:CDS 50.0%
GATACTTCGTCGGAGAAAGG+CGG - chr2_2:51426233-51426252 Msa0256600:intron 50.0%
ATACTTCGTCGGAGAAAGGC+GGG - chr2_2:51426234-51426253 Msa0256600:intron 50.0%
GGTCATTTCATGGACCTGAG+AGG - chr2_2:51426294-51426313 Msa0256600:intron 50.0%
GTTGTGGAGTCTGAGAGGAA+AGG - chr2_2:51426479-51426498 Msa0256600:CDS 50.0%
TGTGGAGTCTGAGAGGAAAG+GGG - chr2_2:51426481-51426500 Msa0256600:CDS 50.0%
! TGGCGGATAATCTTCTGGAG+AGG - chr2_2:51426594-51426613 Msa0256600:CDS 50.0%
CATGTTCGGGAACCACAAAC+TGG + chr2_2:51426667-51426686 None:intergenic 50.0%
CCTGAGACTTAGACCAAGAG+AGG + chr2_2:51426751-51426770 None:intergenic 50.0%
CCTCTCTTGGTCTAAGTCTC+AGG - chr2_2:51426748-51426767 Msa0256600:intron 50.0%
AAGTGGCTGAACAGGCATCA+AGG - chr2_2:51427016-51427035 Msa0256600:intron 50.0%
AGTGGCTGAACAGGCATCAA+GGG - chr2_2:51427017-51427036 Msa0256600:intron 50.0%
CCTACTTGTTCCCACAGTAC+AGG + chr2_2:51427227-51427246 None:intergenic 50.0%
CCTGTACTGTGGGAACAAGT+AGG - chr2_2:51427224-51427243 Msa0256600:intron 50.0%
! GGTTCGCATATGGAGCATTC+CGG - chr2_2:51428966-51428985 Msa0256600:CDS 50.0%
CTTGAACCAACCTGACCATC+AGG + chr2_2:51429051-51429070 None:intergenic 50.0%
!! CTGATGGTCAGGTTGGTTCA+AGG - chr2_2:51429049-51429068 Msa0256600:CDS 50.0%
ACTTCTGTTGGGCCTGCAAT+CGG + chr2_2:51429815-51429834 None:intergenic 50.0%
TGCAGGCCCAACAGAAGTAA+AGG - chr2_2:51429817-51429836 Msa0256600:CDS 50.0%
ATGTGTCAGTAGCCATTCCC+TGG - chr2_2:51429881-51429900 Msa0256600:CDS 50.0%
TCATCCTCCTACACCTGTAG+AGG - chr2_2:51429996-51430015 Msa0256600:CDS 50.0%
!! AGAGGAAAACTTCGGTGTCG+AGG - chr2_2:51430014-51430033 Msa0256600:CDS 50.0%
!! GAGGAAAACTTCGGTGTCGA+GGG - chr2_2:51430015-51430034 Msa0256600:CDS 50.0%
ACTGTTTGTCGCACTCGCAA+TGG + chr2_2:51430082-51430101 None:intergenic 50.0%
TCAAAGCCCTCGTGTCAGTA+TGG - chr2_2:51430164-51430183 Msa0256600:CDS 50.0%
!! GAGATTGGAGCGAGGTGTTG+GGG + chr2_2:51425051-51425070 None:intergenic 55.0%
GAGAGATTGGAGCGAGGTGT+TGG + chr2_2:51425053-51425072 None:intergenic 55.0%
TTTCCGGACGGAGGTTTAGC+CGG + chr2_2:51425759-51425778 None:intergenic 55.0%
TTGTGCAGGAGCTTATGCGC+CGG - chr2_2:51426039-51426058 Msa0256600:intron 55.0%
! TATGCGCCGGCAGAATCATG+AGG - chr2_2:51426052-51426071 Msa0256600:intron 55.0%
CGGTCTCCTCATGATTCTGC+CGG + chr2_2:51426061-51426080 None:intergenic 55.0%
CGGCAGAATCATGAGGAGAC+CGG - chr2_2:51426059-51426078 Msa0256600:intron 55.0%
CCCATTTCCAACACCACCAC+CGG + chr2_2:51426093-51426112 None:intergenic 55.0%
! CCGGTGGTGGTGTTGGAAAT+GGG - chr2_2:51426090-51426109 Msa0256600:intron 55.0%
TGGCAGGTCATAAGGAGAGG+AGG - chr2_2:51426195-51426214 Msa0256600:CDS 55.0%
TGTCTCACTCTCACCCTCTC+AGG + chr2_2:51426311-51426330 None:intergenic 55.0%
ACCCGTGACGTTGTCTCCTT+TGG - chr2_2:51426574-51426593 Msa0256600:CDS 55.0%
GCCAAAGGAGACAACGTCAC+GGG + chr2_2:51426578-51426597 None:intergenic 55.0%
CGCCAAAGGAGACAACGTCA+CGG + chr2_2:51426579-51426598 None:intergenic 55.0%
CGTGACGTTGTCTCCTTTGG+CGG - chr2_2:51426577-51426596 Msa0256600:CDS 55.0%
TGGAGAGGAAGAGAAAGGGG+AGG - chr2_2:51426609-51426628 Msa0256600:intron 55.0%
TGGACAAAACAGTGCGGCTG+TGG - chr2_2:51428400-51428419 Msa0256600:intron 55.0%
GGCCTACATGACTGCAACTC+AGG + chr2_2:51428533-51428552 None:intergenic 55.0%
TCTGTGCAGGGTGCACTAGT+TGG - chr2_2:51429134-51429153 Msa0256600:CDS 55.0%
CTGTGAGGGAGGCTGAAATC+TGG + chr2_2:51429729-51429748 None:intergenic 55.0%
TCAGCCTCCCTCACAGCAAA+TGG - chr2_2:51429733-51429752 Msa0256600:CDS 55.0%
GCCTGGTATGGGTGATGCAT+GGG - chr2_2:51429903-51429922 Msa0256600:CDS 55.0%
TCCCATGCATCACCCATACC+AGG + chr2_2:51429907-51429926 None:intergenic 55.0%
GAGGGTTCACGATCTGCTTC+AGG - chr2_2:51430033-51430052 Msa0256600:CDS 55.0%
CTCGCAATGGTTGCATGGTG+TGG + chr2_2:51430069-51430088 None:intergenic 55.0%
TCGCACTCGCAATGGTTGCA+TGG + chr2_2:51430074-51430093 None:intergenic 55.0%
!! TGGAGCGAGGTGTTGGGGTT+CGG + chr2_2:51425046-51425065 None:intergenic 60.0%
GGGGATCCGCCAGAATTACC+GGG + chr2_2:51425738-51425757 None:intergenic 60.0%
CGGGGATCCGCCAGAATTAC+CGG + chr2_2:51425739-51425758 None:intergenic 60.0%
! CGGTAATTCTGGCGGATCCC+CGG - chr2_2:51425737-51425756 Msa0256600:CDS 60.0%
TTCCGGACGGAGGTTTAGCC+GGG + chr2_2:51425758-51425777 None:intergenic 60.0%
GAGGAGACCGGTGATGTAGC+CGG - chr2_2:51426071-51426090 Msa0256600:intron 60.0%
! ACCACCACCGGCTACATCAC+CGG + chr2_2:51426081-51426100 None:intergenic 60.0%
! GATGTAGCCGGTGGTGGTGT+TGG - chr2_2:51426083-51426102 Msa0256600:intron 60.0%
! GCCGGTGGTGGTGTTGGAAA+TGG - chr2_2:51426089-51426108 Msa0256600:intron 60.0%
GGCAGGTTGTGGAGTCTGAG+AGG - chr2_2:51426474-51426493 Msa0256600:CDS 60.0%
GGAGACAACGTCACGGGTTC+CGG + chr2_2:51426572-51426591 None:intergenic 60.0%
AGGGGAGGTCGTCCGTTAGT+AGG - chr2_2:51426624-51426643 Msa0256600:intron 60.0%
GGTGCTCATGCTAGTCCCAC+CGG + chr2_2:51428088-51428107 None:intergenic 60.0%
! GGGACTAGCATGAGCACCTC+TGG - chr2_2:51428090-51428109 Msa0256600:intron 60.0%
TCAGTAGCCATTCCCTGGCC+TGG - chr2_2:51429886-51429905 Msa0256600:CDS 60.0%
AGCCATTCCCTGGCCTGGTA+TGG - chr2_2:51429891-51429910 Msa0256600:CDS 60.0%
GCCATTCCCTGGCCTGGTAT+GGG - chr2_2:51429892-51429911 Msa0256600:CDS 60.0%
ACCCATACCAGGCCAGGGAA+TGG + chr2_2:51429896-51429915 None:intergenic 60.0%
GCATCACCCATACCAGGCCA+GGG + chr2_2:51429901-51429920 None:intergenic 60.0%
TGCATCACCCATACCAGGCC+AGG + chr2_2:51429902-51429921 None:intergenic 60.0%
GGCCTGGTATGGGTGATGCA+TGG - chr2_2:51429902-51429921 Msa0256600:CDS 60.0%
TCCCCGGCTAAACCTCCGTC+CGG - chr2_2:51425753-51425772 Msa0256600:CDS 65.0%
TCCGGACGGAGGTTTAGCCG+GGG + chr2_2:51425757-51425776 None:intergenic 65.0%
GAGACCGGTGATGTAGCCGG+TGG - chr2_2:51426074-51426093 Msa0256600:intron 65.0%
ACCGGTGATGTAGCCGGTGG+TGG - chr2_2:51426077-51426096 Msa0256600:intron 65.0%
CTTCGTCGGAGAAAGGCGGG+AGG - chr2_2:51426237-51426256 Msa0256600:intron 65.0%
GAGGAGGTCGAGCTCGGCTA+CGG - chr2_2:51426256-51426275 Msa0256600:intron 65.0%
CGTCGGAGAAAGGCGGGAGG+AGG - chr2_2:51426240-51426259 Msa0256600:intron 70.0%
AGGCGGGAGGAGGTCGAGCT+CGG - chr2_2:51426250-51426269 Msa0256600:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 51425023 51430506 51425023 ID=Msa0256600;Name=Msa0256600
chr2_2 mRNA 51425023 51430506 51425023 ID=Msa0256600-mRNA-1;Parent=Msa0256600;Name=Msa0256600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=274|1|1|1|1|1|7|204|848
chr2_2 exon 51425023 51425822 51425023 ID=Msa0256600-mRNA-1:exon:15552;Parent=Msa0256600-mRNA-1
chr2_2 exon 51425964 51426057 51425964 ID=Msa0256600-mRNA-1:exon:15551;Parent=Msa0256600-mRNA-1
chr2_2 exon 51426140 51426222 51426140 ID=Msa0256600-mRNA-1:exon:15550;Parent=Msa0256600-mRNA-1
chr2_2 exon 51426335 51426386 51426335 ID=Msa0256600-mRNA-1:exon:15549;Parent=Msa0256600-mRNA-1
chr2_2 exon 51426470 51426627 51426470 ID=Msa0256600-mRNA-1:exon:15548;Parent=Msa0256600-mRNA-1
chr2_2 exon 51427058 51427148 51427058 ID=Msa0256600-mRNA-1:exon:15547;Parent=Msa0256600-mRNA-1
chr2_2 exon 51428760 51430506 51428760 ID=Msa0256600-mRNA-1:exon:15546;Parent=Msa0256600-mRNA-1
chr2_2 five_prime_UTR 51430233 51430506 51430233 ID=Msa0256600-mRNA-1:five_prime_utr;Parent=Msa0256600-mRNA-1
chr2_2 CDS 51428760 51430232 51428760 ID=Msa0256600-mRNA-1:cds;Parent=Msa0256600-mRNA-1
chr2_2 CDS 51427058 51427148 51427058 ID=Msa0256600-mRNA-1:cds;Parent=Msa0256600-mRNA-1
chr2_2 CDS 51426470 51426627 51426470 ID=Msa0256600-mRNA-1:cds;Parent=Msa0256600-mRNA-1
chr2_2 CDS 51426335 51426386 51426335 ID=Msa0256600-mRNA-1:cds;Parent=Msa0256600-mRNA-1
chr2_2 CDS 51426140 51426222 51426140 ID=Msa0256600-mRNA-1:cds;Parent=Msa0256600-mRNA-1
chr2_2 CDS 51425964 51426057 51425964 ID=Msa0256600-mRNA-1:cds;Parent=Msa0256600-mRNA-1
chr2_2 CDS 51425227 51425822 51425227 ID=Msa0256600-mRNA-1:cds;Parent=Msa0256600-mRNA-1
chr2_2 three_prime_UTR 51425023 51425226 51425023 ID=Msa0256600-mRNA-1:three_prime_utr;Parent=Msa0256600-mRNA-1
Gene Sequence

>Msa0256600

ATGAACAAACCCATTCTCATTTCTCAAGAAGACCAACTCCAACAACAACATCAACACCAACAACTAGACCAACAAGATTTCTTCTACGAATCAAACGACCGTTTACTCTCTCTCTCCTCTTCCTGCTCTTGTTCCAACTCCAACTCTGACCAAGAAGACGAAGACCAAGAAAACAACAACAACAACAATAATTGTAATTACAATTTTGCCCTTAACAGTTACGATATATGGATCTCTCAACCTTCTTCCGTTTCAGAACGTCGTACTCGTCTTCTTCAAACTATTGGTCTCTCTTCCGATTTTGCCCTTTCACGTGGTAACCCAATCCCACCTTACAATGCCATATTCCGATCCAAATCTGACGGTCATAACAACAACAACAATTCTAACAACTCCTGTTTTATCTCTTCTTCTACTGTAAATGTAAATAGTTCTATTCCCGGTAATTCTGGCGGATCCCCGGCTAAACCTCCGTCCGGAAAGAATTCTTCTAGAAGAAGTCATTCCGGTGTTGATTTCTTGCCGGGTAATTCTTCTACTTTGCTGGACACGGGTGAGATAGAATGCGATGAAATTGAAAAAAGGGAAGAACAAGCTTGTACCATAAGAGATCTTGATAATGGAAAAGAATTTGTTGTGAAAGAAGTTAGAGAAGATGGAATGTGGAATAAAGTGAAGGAGGTTGGTACTGGGAGACAGTTGACTATGGAGGAATTTGAGATGACGGTTGGTCAATCTCCGATTGTGCAGGAGCTTATGCGCCGGCAGAATCATGAGGAGACCGGTGATGTAGCCGGTGGTGGTGTTGGAAATGGGAGTAATGGTAATGGAGGTTGTTCTAAGGGGAAAAAGAAAGGAGGGAGTTGGTTGAAGAGTATCAAGAGTGTTGCTAGTTCAATGGCAGGTCATAAGGAGAGGAGGAGTAGTGATGAGAGAGATACTTCGTCGGAGAAAGGCGGGAGGAGGTCGAGCTCGGCTACGGATGATAGTCAAGATGGGTCATTTCATGGACCTGAGAGGGTGAGAGTGAGACAATATGGGAAATCATGTAAAGAGTTAACTGCATTGTATAAGAGTCAAGAGATTCAAGCTCATAATGGATCAATTTGGAGTATTAAGTTTAGTTTAGATGGGAAATATCTTGCTAGTGCTGGTGAGGATTGTGTGATTCATGTTTGGCAGGTTGTGGAGTCTGAGAGGAAAGGGGAGTTGTTGCTTATGGAGAAACAGGAGGATGTTAATGTTAATATGTTATTTCTTGTTAATGGGTCGCCGGAACCCGTGACGTTGTCTCCTTTGGCGGATAATCTTCTGGAGAGGAAGAGAAAGGGGAGGTCGTCCGTTAGTAGGAAGTCGTTGAGTTTGGACCAGTTTGTGGTTCCCGAACATGTGTTTGCACTCACTGAAAAACCCGTTTGCTCCTTTAAAGGTCATTTGCATGATGTGCTTGACCTCTCTTGGTCTAAGTCTCAGCACTTGCTCTCATCTTCAATGGACAAAACAGTGCGGCTGTGGCATTTGTCTAGCAAGTCTTGTTTGAAGATTTTTTCACACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGTGGATCTTTGGATGCTAAGGTTCGCATATGGAGCATTCCGGATCGACAAGTTGTTGATTGGATCGATCTTCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGGTGCACTAGTTGGTTCATACAAGGGTAGCTGTCATTTATATAATACATCTGAAAATAAGTTGCAACAGAAAAGTCAGATCAATCTGCAGAACAAGAAAAAGAAATCAAATCACAAGAAAATTACTGGTTTCCAGTTTGCCCCAGGAAGTTCATCAGAAGTACTTATCACATCTGCTGATTCTCGAATACGGGTTGTTGATGGTATTGATCTGGTTCATAAGTTTAAAGGCTTTCGAAATGCAAGTAGCCAGATTTCAGCCTCCCTCACAGCAAATGGTAAATATATTGTTGCTGCAAGTGAGGATTCCCATGTATACATCTGGAAAAATGAAGCCGATTGCAGGCCCAACAGAAGTAAAGGTGTCACCGTGACACAGTCCTATGAACATTTTCACTGTAAAGATGTGTCAGTAGCCATTCCCTGGCCTGGTATGGGTGATGCATGGGACATGCATGATACATTTTCTGGAGCACAAACCGAGCTTGATAGCAACAACGACGAAATCGCATCAGCCAATCATCCTCCTACACCTGTAGAGGAAAACTTCGGTGTCGAGGGTTCACGATCTGCTTCAGGTTATAATAGTCCACACCATGCAACCATTGCGAGTGCGACAAACAGTTACTTCTTCGATAGAATTTCTGCAACATGGCCGGAAGAAAAACTTCTTCTAGCTGCAAGAAATCAAAGCCCTCGTGTCAGTATGGATTTCACAAATGGGGTAAGTCAAAAAATGTCAGCCTGGGGTATGGTGATTGTTACTGCTGGTCTTCGAGGTGAGATTAGAACTTTCCAAAATTTTGGATTGCCACTTCGAATATAA
Protein sequence

>Msa0256600

MNKPILISQEDQLQQQHQHQQLDQQDFFYESNDRLLSLSSSCSCSNSNSDQEDEDQENNNNNNNCNYNFALNSYDIWISQPSSVSERRTRLLQTIGLSSDFALSRGNPIPPYNAIFRSKSDGHNNNNNSNNSCFISSSTVNVNSSIPGNSGGSPAKPPSGKNSSRRSHSGVDFLPGNSSTLLDTGEIECDEIEKREEQACTIRDLDNGKEFVVKEVREDGMWNKVKEVGTGRQLTMEEFEMTVGQSPIVQELMRRQNHEETGDVAGGGVGNGSNGNGGCSKGKKKGGSWLKSIKSVASSMAGHKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLMEKQEDVNVNMLFLVNGSPEPVTLSPLADNLLERKRKGRSSVSRKSLSLDQFVVPEHVFALTEKPVCSFKGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWIDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSNHKKITGFQFAPGSSSEVLITSADSRIRVVDGIDLVHKFKGFRNASSQISASLTANGKYIVAASEDSHVYIWKNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDAWDMHDTFSGAQTELDSNNDEIASANHPPTPVEENFGVEGSRSASGYNSPHHATIASATNSYFFDRISATWPEEKLLLAARNQSPRVSMDFTNGVSQKMSAWGMVIVTAGLRGEIRTFQNFGLPLRI*