AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0216470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216470 MtrunA17_Chr2g0318031 91.145 1118 69 4 1 1111 1 1095 0.0 2041
Msa0216470 MtrunA17_Chr2g0281781 36.018 894 453 26 1 817 1 852 2.88e-138 440
Msa0216470 MtrunA17_Chr1g0187491 33.718 694 340 27 1 638 1 630 2.49e-73 266
Msa0216470 MtrunA17_Chr1g0166471 32.241 580 263 21 1 527 1 503 3.58e-61 228
Msa0216470 MtrunA17_Chr8g0344661 33.636 220 131 3 1 213 1 212 1.40e-30 131
Msa0216470 MtrunA17_Chr3g0128441 31.863 204 123 5 7 207 11 201 8.77e-19 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216470 AT4G27430.1 39.112 1194 506 38 1 1110 1 1057 0.0 612
Msa0216470 AT4G27430.2 39.112 1194 506 38 1 1110 1 1057 0.0 612
Msa0216470 AT1G61100.2 37.130 878 393 34 1 813 1 784 1.94e-128 412
Msa0216470 AT1G61100.1 37.088 879 393 34 1 813 1 785 3.02e-128 411
Msa0216470 AT5G43310.5 31.530 869 389 31 1 811 1 721 1.63e-75 271
Msa0216470 AT5G43310.2 31.954 870 384 34 1 811 1 721 2.40e-75 272
Msa0216470 AT5G43310.4 31.530 869 389 31 1 811 1 721 3.95e-75 271
Msa0216470 AT5G43310.3 31.530 869 389 31 1 811 1 721 3.95e-75 271
Msa0216470 AT3G14172.1 42.180 211 109 4 1 206 1 203 7.52e-41 164
Msa0216470 AT5G43310.1 63.810 105 37 1 1 104 1 105 9.96e-37 151
Msa0216470 AT5G43310.1 28.165 703 335 28 134 811 221 778 7.45e-32 135
Msa0216470 AT3G14172.2 39.336 211 107 5 1 206 1 195 1.48e-34 144
Msa0216470 AT1G17360.1 35.266 207 113 3 1 204 1 189 1.61e-31 134
Msa0216470 AT1G72410.1 30.882 204 133 1 1 204 1 196 4.12e-26 117
Msa0216470 AT1G72410.2 30.882 204 133 1 1 204 1 196 4.18e-26 117
Msa0216470 AT3G14172.3 38.272 162 87 4 50 206 12 165 1.48e-21 102

Find 263 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAAAGCTCAAACTTTAA+AGG 0.136507 2_1:+62357463 None:intergenic
CCAGTTTGTTTAGCTTTAAT+TGG 0.174295 2_1:-62351989 Msa0216470:three_prime_UTR
AGACATATACACATGTATTT+TGG 0.197619 2_1:+62357651 None:intergenic
TTCACAGCAGTATGTATTAA+TGG 0.204043 2_1:+62352681 None:intergenic
TTCCGTAAGCTTATCTTCTT+TGG 0.222118 2_1:-62352492 Msa0216470:CDS
ATTTGTTTCGCTGACGCTTT+TGG 0.238140 2_1:-62355903 Msa0216470:CDS
CCATTAGATGGATGAATCTT+AGG 0.239929 2_1:+62353299 None:intergenic
AAAACAGCCAATGAAATTTC+AGG 0.242138 2_1:-62354395 Msa0216470:CDS
GTTTCTGTGAGTAGTAATTT+TGG 0.246184 2_1:-62352053 Msa0216470:three_prime_UTR
ATTTACAATACAACAAAATA+TGG 0.262958 2_1:+62352135 None:intergenic
ACCCAACACATTCTTAGATT+TGG 0.267760 2_1:-62357732 Msa0216470:five_prime_UTR
TGCCTTCAAGGAAGGCTTCT+TGG 0.271743 2_1:+62353163 None:intergenic
AAGCTAAACAAACTGGAAAA+TGG 0.272520 2_1:+62351996 None:intergenic
GCCTTCCTTGAAGGCAAATA+AGG 0.273580 2_1:-62353156 Msa0216470:CDS
ATCTGGCTCGTGGGAAATTA+AGG 0.277127 2_1:+62353910 None:intergenic
TACGCCCGTGCTTTAGTTGC+TGG 0.279322 2_1:-62355954 Msa0216470:CDS
TTCTTAGTCTCTCCATTAGA+TGG 0.291797 2_1:+62353287 None:intergenic
CTTCTTCAAGGCACTTCTTT+CGG 0.299554 2_1:+62353370 None:intergenic
ATTTGAATCTCTGAGACTTT+AGG 0.306590 2_1:+62352615 None:intergenic
CTCTTCATTTCCATCTTGAT+TGG 0.310670 2_1:+62356148 None:intergenic
TTCATTGAATTGAATTGAAT+TGG 0.310924 2_1:-62357701 Msa0216470:five_prime_UTR
TATAGATTGTAGATGAAGTT+TGG 0.313339 2_1:-62357493 Msa0216470:five_prime_UTR
CGTCTCTCAAAAGAAGATTC+TGG 0.317168 2_1:+62354443 None:intergenic
TTGCATATTCCCAGGATAAT+AGG 0.319408 2_1:+62354960 None:intergenic
CAATAATCTAACTCTATCTA+TGG 0.323289 2_1:-62357441 Msa0216470:exon
TCGGCCATGACCTCGGCATT+TGG 0.324562 2_1:+62355082 None:intergenic
TCACCTAATCAAGCAAATTC+AGG 0.324869 2_1:-62353191 Msa0216470:CDS
ATAAGATCATCCATGGATTC+TGG 0.325372 2_1:+62355924 None:intergenic
TTCTGTTCCAGTCTTCTTCA+AGG 0.325703 2_1:+62353358 None:intergenic
GACAAGTTATCTTCACTTCA+TGG 0.327367 2_1:-62352771 Msa0216470:CDS
AGTTAACAAGAACGTGAAAA+TGG 0.327689 2_1:-62357768 Msa0216470:five_prime_UTR
TTCCCTCTCTGCCACAATAA+AGG 0.329132 2_1:+62354273 None:intergenic
CACATTATGTTCTGTTGGAT+TGG 0.330308 2_1:-62357590 Msa0216470:five_prime_UTR
AAAAGAACCTTGTTCTTGTT+GGG 0.335037 2_1:+62357378 None:intergenic
TTCCTCTACCTTGTGTTTCA+AGG 0.346357 2_1:+62354609 None:intergenic
AAACCTTTGCAAGGTGGCTT+TGG 0.347703 2_1:+62357128 None:intergenic
GCTGATTCCAACGGGCAAAA+AGG 0.348123 2_1:-62354487 Msa0216470:CDS
GTATGTATTAATGGTTTGTT+AGG 0.350436 2_1:+62352690 None:intergenic
TCTTGACATGACATCAGATT+TGG 0.351205 2_1:+62353646 None:intergenic
AAGCACCATGACATGCTAAA+TGG 0.353658 2_1:-62354520 Msa0216470:CDS
TATTCTTCCTGAAATTTCAT+TGG 0.354187 2_1:+62354388 None:intergenic
TCTTGCATTGCTTGGTTACT+CGG 0.358323 2_1:+62352579 None:intergenic
GACTCGGGAAGTAAAATAAA+TGG 0.359638 2_1:-62355633 Msa0216470:CDS
CCTAAGATTCATCCATCTAA+TGG 0.363387 2_1:-62353299 Msa0216470:CDS
ATGTTATATAGTTTATATTA+CGG 0.368238 2_1:+62354707 None:intergenic
GATGATTCTACTCATGATAT+AGG 0.370285 2_1:-62354418 Msa0216470:CDS
GTTCCGTCTTCCTATTATCC+TGG 0.375217 2_1:-62354970 Msa0216470:CDS
ATTAGATACAAGATTTCTTT+CGG 0.377858 2_1:+62353760 None:intergenic
AACAGCTTCTGATATCAGTT+TGG 0.382114 2_1:-62354002 Msa0216470:CDS
ACATCTGGAATCATACTTGC+AGG 0.382829 2_1:-62355663 Msa0216470:CDS
TTAGCTCAGTAGAAAGTGTT+TGG 0.387308 2_1:-62352321 Msa0216470:three_prime_UTR
GGACCTGAATTTGCTTGATT+AGG 0.392454 2_1:+62353188 None:intergenic
TTGCCTTACTTAAGGACATC+TGG 0.394849 2_1:-62355678 Msa0216470:CDS
CAATCCACAACAGGAAGAAA+TGG 0.395001 2_1:-62352554 Msa0216470:CDS
AACCCGTATTGCCTTACTTA+AGG 0.395294 2_1:-62355686 Msa0216470:CDS
GTCAAGAAGTAGAACATTGC+CGG 0.397855 2_1:-62353630 Msa0216470:CDS
CCAATTAAAGCTAAACAAAC+TGG 0.398229 2_1:+62351989 None:intergenic
AAACAAGAAATCTCAGGTAT+TGG 0.398657 2_1:-62354881 Msa0216470:CDS
TGTGAATTCAAAGGTGAATC+AGG 0.398868 2_1:-62352664 Msa0216470:CDS
GAAGATGTGCATAAAACAAA+AGG 0.403544 2_1:-62353080 Msa0216470:CDS
AAACGGGGATCGCTCTGAAA+TGG 0.412282 2_1:-62354929 Msa0216470:CDS
CTTAGTCTTTGCGCTACTCT+TGG 0.413113 2_1:+62353046 None:intergenic
AGAGGAAGCTGTTGCGTCAC+TGG 0.413854 2_1:-62354593 Msa0216470:CDS
GAAAAGAACCTTGTTCTTGT+TGG 0.414044 2_1:+62357377 None:intergenic
AGGTACCTTATTTGCCTTCA+AGG 0.415479 2_1:+62353151 None:intergenic
AACCAAGAAGCCTTCCTTGA+AGG 0.415998 2_1:-62353165 Msa0216470:CDS
CATGGAGCATATGTAGATTC+AGG 0.421322 2_1:+62357156 None:intergenic
TATTGTGGCAGAGAGGGAAT+TGG 0.425986 2_1:-62354269 Msa0216470:CDS
TTCAAGGAAGGCTTCTTGGT+TGG 0.426938 2_1:+62353167 None:intergenic
ACTAACACATTATGTTCTGT+TGG 0.430919 2_1:-62357595 Msa0216470:five_prime_UTR
ATCTCAGAGAAATGATGAAT+CGG 0.432098 2_1:-62354149 Msa0216470:CDS
CTTTGACTTCAGCAAGGAAA+GGG 0.432104 2_1:-62353325 Msa0216470:CDS
TTATCCATTTCTTCCTGTTG+TGG 0.432151 2_1:+62352550 None:intergenic
AACCTAAAGCAAAACTCTCT+TGG 0.434391 2_1:-62357797 Msa0216470:five_prime_UTR
CATGATTCAAGCTCGACCAT+TGG 0.437416 2_1:-62354044 Msa0216470:CDS
GTTAATGAAAGACTAGCTTC+TGG 0.438563 2_1:-62357258 Msa0216470:CDS
TGTGACTTGATGATTGTTGC+TGG 0.439597 2_1:-62357285 Msa0216470:CDS
AGCTTATCTTCTTTGGAAGA+AGG 0.440902 2_1:-62352485 Msa0216470:CDS
ATATGCAATGGCCTCCAAAC+GGG 0.441469 2_1:-62354945 Msa0216470:CDS
AAGGAGATTGTGCAGATTGA+AGG 0.443294 2_1:-62356510 Msa0216470:CDS
ATTTCAGAGCGATCCCCGTT+TGG 0.446504 2_1:+62354931 None:intergenic
TTCATTTCCATCTTGATTGG+AGG 0.446898 2_1:+62356151 None:intergenic
GTTCTCTTTATCCATGCTCT+TGG 0.452777 2_1:-62352383 Msa0216470:three_prime_UTR
GTAGCTGTAGACCTGCTTCC+CGG 0.454447 2_1:+62353611 None:intergenic
TGGAGCTGTTTCTTCAGTAA+AGG 0.456678 2_1:+62353131 None:intergenic
AAGGAGCTGAAGAACCTTTG+TGG 0.456794 2_1:-62352466 Msa0216470:exon
ATCCAATGGAGACGGAGAAA+AGG 0.461306 2_1:-62354686 Msa0216470:CDS
ATATTCTTTCACAATGTTCA+AGG 0.463350 2_1:-62352078 Msa0216470:three_prime_UTR
GAACAAAACAACAACAATCA+TGG 0.467082 2_1:-62352966 Msa0216470:CDS
TCCAAATCTAAGAATGTGTT+GGG 0.471893 2_1:+62357731 None:intergenic
ATGCCGAGGGGCGTGTCAAA+AGG 0.472016 2_1:-62356184 Msa0216470:CDS
TGCAAGAATCAATCCACAAC+AGG 0.472379 2_1:-62352563 Msa0216470:CDS
AAGAATAAGACCATGTGGAT+TGG 0.472669 2_1:-62352202 Msa0216470:three_prime_UTR
TTTGTGGCATCAGGTTTGAC+AGG 0.473208 2_1:+62352996 None:intergenic
ATTCCAGATGTCCTTAAGTA+AGG 0.474368 2_1:+62355675 None:intergenic
GGATTGATTCTTGCATTGCT+TGG 0.475211 2_1:+62352571 None:intergenic
AGAGAGGGAATTGGACAGTA+AGG 0.477932 2_1:-62354260 Msa0216470:CDS
GGGGCCAAATGCCGAGGTCA+TGG 0.478199 2_1:-62355086 Msa0216470:CDS
TAAGAATGAAATCAAGGCTT+CGG 0.478582 2_1:-62353027 Msa0216470:CDS
ACAAACCTCTCTATAACTTC+TGG 0.480450 2_1:+62356543 None:intergenic
AAACCTTCTGCTGAGTTACT+CGG 0.483075 2_1:+62353213 None:intergenic
TACCAGGATACATGTATCCT+TGG 0.483817 2_1:+62354998 None:intergenic
GATTGTCTAGAACACGTTGA+AGG 0.488204 2_1:+62356012 None:intergenic
TGTCCTTAAGTAAGGCAATA+CGG 0.488371 2_1:+62355683 None:intergenic
GAGGTTTGTGACCATAGAAA+AGG 0.488541 2_1:-62356529 Msa0216470:CDS
GTAGAACATTGCCGGGAAGC+AGG 0.488759 2_1:-62353622 Msa0216470:CDS
AAAATACTGGAGCGAAATCT+GGG 0.489271 2_1:-62353718 Msa0216470:CDS
AAATATCTTGAATGTTTCTC+CGG 0.489326 2_1:+62352909 None:intergenic
CAAGGAATGCTGATTCCAAC+GGG 0.490459 2_1:-62354495 Msa0216470:CDS
TTCCGTCTTCCTATTATCCT+GGG 0.490463 2_1:-62354969 Msa0216470:CDS
AGAACCATGAGGAGATCATC+TGG 0.490562 2_1:+62353893 None:intergenic
AATCATGGTTTGAAAGACAT+TGG 0.490701 2_1:-62352951 Msa0216470:CDS
GTCCTTAAGTAAGGCAATAC+GGG 0.490751 2_1:+62355684 None:intergenic
TTCCAAAGAAGATAAGCTTA+CGG 0.490831 2_1:+62352490 None:intergenic
ATCCAAATCTAAGAATGTGT+TGG 0.495526 2_1:+62357730 None:intergenic
TTGGAATTGCTATCATACTA+AGG 0.496104 2_1:-62352183 Msa0216470:three_prime_UTR
TCCAATGGAGACGGAGAAAA+GGG 0.496676 2_1:-62354685 Msa0216470:CDS
AGAAGTGCCTTGAAGAAGAC+TGG 0.497341 2_1:-62353365 Msa0216470:CDS
GCAAAAGATCAGATTTCAAA+AGG 0.497438 2_1:-62357201 Msa0216470:CDS
TACGAAGAGCAAATCGGAAA+AGG 0.497817 2_1:-62353591 Msa0216470:intron
TGGCCCCTTCCATCAGATGA+TGG 0.498715 2_1:+62355102 None:intergenic
GAATGCAGCACCTTGGAGAA+TGG 0.498807 2_1:-62353846 Msa0216470:CDS
AGAATGTGTTGGGTGTGGTT+AGG 0.499088 2_1:+62357741 None:intergenic
ACCTTATTTGCCTTCAAGGA+AGG 0.500268 2_1:+62353155 None:intergenic
TGGGAAAATTTCAAGTAAAG+AGG 0.504134 2_1:-62353699 Msa0216470:CDS
GGAGGCCATTGCATATTCCC+AGG 0.511743 2_1:+62354952 None:intergenic
TATGGAAAATGTATTATACT+TGG 0.512294 2_1:+62352153 None:intergenic
TTCAAATGATTCCTTTATTG+TGG 0.513484 2_1:-62354284 Msa0216470:CDS
AGCACCTTGGAGAATGGAAA+TGG 0.515394 2_1:-62353840 Msa0216470:CDS
GGCAGTTGCAAGGCGATCGA+TGG 0.516940 2_1:+62353235 None:intergenic
ATGACATGCTAAATGGTTCA+AGG 0.520262 2_1:-62354513 Msa0216470:CDS
AACTGAACAAACCAGTCCTT+AGG 0.520450 2_1:-62353265 Msa0216470:CDS
ATGTCGAAACTTGCATGGCT+TGG 0.522390 2_1:+62355579 None:intergenic
AATATGCAATGGCCTCCAAA+CGG 0.523303 2_1:-62354946 Msa0216470:CDS
TTAATGAAAGACTAGCTTCT+GGG 0.524068 2_1:-62357257 Msa0216470:CDS
TTGGTTATTCAATATTTCAA+AGG 0.524836 2_1:-62352364 Msa0216470:three_prime_UTR
ATGTACTGTGGATGATGGTT+CGG 0.526195 2_1:+62355063 None:intergenic
TTCCTTTATTGTGGCAGAGA+GGG 0.526445 2_1:-62354275 Msa0216470:CDS
ATGAGCAAGAAGTTTGAGAA+TGG 0.527708 2_1:-62354361 Msa0216470:CDS
AAGACGAGTCCGTGCGAAGT+TGG 0.528627 2_1:+62352850 None:intergenic
TTCACAAACGGTACACAAGA+AGG 0.529595 2_1:-62353953 Msa0216470:CDS
TCTTTGACTTCAGCAAGGAA+AGG 0.531447 2_1:-62353326 Msa0216470:CDS
TTGAACCATTTAGCATGTCA+TGG 0.531723 2_1:+62354515 None:intergenic
GGATACATGTATCCTTGGTA+TGG 0.531774 2_1:+62355003 None:intergenic
AAAGACTAAGAATGAAATCA+AGG 0.531926 2_1:-62353033 Msa0216470:CDS
GATCGATGGTGGAACTCCTA+AGG 0.533024 2_1:+62353249 None:intergenic
AATGAGGAAGAATTTATCAA+TGG 0.535620 2_1:-62354637 Msa0216470:CDS
ACTTTCTACTGAGCTAAGAA+TGG 0.537768 2_1:+62352327 None:intergenic
GAAGACGGAACCTGCATACC+AGG 0.538054 2_1:+62354982 None:intergenic
TCTCAGAGAAATGATGAATC+GGG 0.538579 2_1:-62354148 Msa0216470:CDS
TGAAGGGAGTTTGTCGAATG+AGG 0.539941 2_1:-62354653 Msa0216470:CDS
TACCAAGGATACATGTATCC+TGG 0.541094 2_1:-62355000 Msa0216470:CDS
ACTATTTCCTCCAATCAAGA+TGG 0.542190 2_1:-62356158 Msa0216470:CDS
ATACATGTATCCTGGTATGC+AGG 0.542557 2_1:-62354992 Msa0216470:CDS
AACACCATCATCTGATGGAA+GGG 0.544199 2_1:-62355106 Msa0216470:CDS
GGCCAATGTCGAAACTTGCA+TGG 0.544950 2_1:+62355574 None:intergenic
TACAGCTACGAAGAGCAAAT+CGG 0.545547 2_1:-62353597 Msa0216470:CDS
TCAGAGCGATCCCCGTTTGG+AGG 0.546490 2_1:+62354934 None:intergenic
AAAGAACCTTGTTCTTGTTG+GGG 0.547167 2_1:+62357379 None:intergenic
ATAAACTATATAACATCCAA+TGG 0.548118 2_1:-62354700 Msa0216470:CDS
ATGTTTCTCCGGTGATGCCT+TGG 0.550614 2_1:+62352920 None:intergenic
TTCCTTGAAACACAAGGTAG+AGG 0.550703 2_1:-62354611 Msa0216470:CDS
GGATGAGATTGCAGCCATGC+AGG 0.550747 2_1:-62355718 Msa0216470:CDS
AAGATGTGCATAAAACAAAA+GGG 0.552116 2_1:-62353079 Msa0216470:CDS
GCATGATCAAGATAAGAACT+TGG 0.553572 2_1:+62357416 None:intergenic
AGTGCTGACCAAGGCATCAC+CGG 0.554150 2_1:-62352928 Msa0216470:CDS
TCAAGAAGTAGAACATTGCC+GGG 0.554753 2_1:-62353629 Msa0216470:CDS
AACCTTCTGCTGAGTTACTC+GGG 0.555699 2_1:+62353214 None:intergenic
TACAGCAGAATGCAGCACCT+TGG 0.558825 2_1:-62353853 Msa0216470:CDS
GTTCAAACACCATCATCTGA+TGG 0.561192 2_1:-62355111 Msa0216470:CDS
GCAAGTTTCGACATTGGCCA+AGG 0.562257 2_1:-62355570 Msa0216470:intron
GAATGAAGACAAGCTGTGGA+TGG 0.564189 2_1:-62355739 Msa0216470:CDS
AGTTTGGTTTCAGACGTTGT+CGG 0.566700 2_1:-62353986 Msa0216470:CDS
TGATGGTTCGGCCATGACCT+CGG 0.567836 2_1:+62355075 None:intergenic
GAGTTACTCGGGCAGTTGCA+AGG 0.567913 2_1:+62353225 None:intergenic
TCAAGGAATGCTGATTCCAA+CGG 0.568811 2_1:-62354496 Msa0216470:CDS
AGCCATGCAAGTTTCGACAT+TGG 0.568946 2_1:-62355576 Msa0216470:CDS
GAATTAAATTGATGTTCCAA+TGG 0.568953 2_1:+62354028 None:intergenic
ATTGCTTGGTTACTCGGCGG+AGG 0.570118 2_1:+62352585 None:intergenic
AGATAACAACAATTCCTCGC+TGG 0.570326 2_1:+62354168 None:intergenic
AATCTTGTATCTAATCATGA+AGG 0.570547 2_1:-62353752 Msa0216470:CDS
CGTGTTGAATATTTCAACGA+AGG 0.570645 2_1:-62354229 Msa0216470:CDS
TATTTCAACGAAGGGAAGGA+TGG 0.570660 2_1:-62354220 Msa0216470:CDS
AAACACCATCATCTGATGGA+AGG 0.571552 2_1:-62355107 Msa0216470:CDS
CATTTAAGGTGAGAAACAAA+CGG 0.571866 2_1:+62357225 None:intergenic
AAATCCAGCAACTAAAGCAC+GGG 0.574101 2_1:+62355950 None:intergenic
GATGGTGTTTGAACTGATGC+TGG 0.577297 2_1:+62355120 None:intergenic
CGTCTTCGCAACAAGAAGCA+TGG 0.577721 2_1:-62354757 Msa0216470:CDS
TTATCCATTTCCATTCTCCA+AGG 0.577841 2_1:+62353836 None:intergenic
ACTTGCAGGTGAAGATGACT+CGG 0.578585 2_1:-62355649 Msa0216470:CDS
CTGAATCTACATATGCTCCA+TGG 0.579695 2_1:-62357155 Msa0216470:CDS
GGGAAGTAAAATAAATGGCA+CGG 0.579736 2_1:-62355628 Msa0216470:CDS
GAAACAAATAAGATCATCCA+TGG 0.580905 2_1:+62355917 None:intergenic
GGAAGTAAAATAAATGGCAC+GGG 0.582458 2_1:-62355627 Msa0216470:CDS
TCACCAAAGCCACCTTGCAA+AGG 0.584782 2_1:-62357131 Msa0216470:intron
TACATGTATCCTTGGTATGG+AGG 0.585915 2_1:+62355006 None:intergenic
TGAATATTTCAACGAAGGGA+AGG 0.586689 2_1:-62354224 Msa0216470:CDS
AAAAGAATGAAGACAAGCTG+TGG 0.587370 2_1:-62355743 Msa0216470:CDS
ATGTGTTGGGTGTGGTTAGG+AGG 0.588238 2_1:+62357744 None:intergenic
GCAAGAAGTTTGAGAATGGA+AGG 0.588781 2_1:-62354357 Msa0216470:CDS
GACTCTTCAAAAGTAGCGAA+AGG 0.590628 2_1:-62352516 Msa0216470:CDS
GAAAAGGGTAGTATCACTGA+AGG 0.594222 2_1:-62354670 Msa0216470:CDS
GTGTTGAATATTTCAACGAA+GGG 0.597338 2_1:-62354228 Msa0216470:CDS
ATGGTGGAACTCCTAAGGAC+TGG 0.598531 2_1:+62353254 None:intergenic
AAAATCCAGCAACTAAAGCA+CGG 0.599026 2_1:+62355949 None:intergenic
ACATACTGCTGTGAATTCAA+AGG 0.601032 2_1:-62352673 Msa0216470:CDS
GAGAAGAGTTAATGTTGCAG+CGG 0.601976 2_1:-62353406 Msa0216470:CDS
ATCTAAGAATGTGTTGGGTG+TGG 0.602955 2_1:+62357736 None:intergenic
AACTCACCCCAACAAGAACA+AGG 0.602994 2_1:-62357385 Msa0216470:intron
TGCCCGAGTAACTCAGCAGA+AGG 0.603687 2_1:-62353216 Msa0216470:CDS
AGTCAATCAAATGAAGCAGA+AGG 0.604743 2_1:-62356483 Msa0216470:intron
GGTGCGGCTGAATTCACAAA+CGG 0.605269 2_1:-62353965 Msa0216470:CDS
ACACCATCATCTGATGGAAG+GGG 0.607256 2_1:-62355105 Msa0216470:CDS
TGAGGAGATCATCTGGCTCG+TGG 0.608106 2_1:+62353900 None:intergenic
AGTTGCAAGGCGATCGATGG+TGG 0.608540 2_1:+62353238 None:intergenic
GAGGAGATCATCTGGCTCGT+GGG 0.610794 2_1:+62353901 None:intergenic
AGACTTCTTTGACTTCAGCA+AGG 0.611959 2_1:-62353331 Msa0216470:CDS
AGGAAATGTGTCATATGCCG+AGG 0.612975 2_1:-62356198 Msa0216470:CDS
TGTGAATGTACTGTGGATGA+TGG 0.613203 2_1:+62355058 None:intergenic
CGAGCCAGATGATCTCCTCA+TGG 0.614234 2_1:-62353897 Msa0216470:CDS
GGTTTCAGACGTTGTCGGTG+CGG 0.614474 2_1:-62353981 Msa0216470:CDS
AAATATCAGCCAACTTCGCA+CGG 0.615028 2_1:-62352859 Msa0216470:CDS
AAAGATCAGATTTCAAAAGG+TGG 0.615886 2_1:-62357198 Msa0216470:CDS
GGAAATGTGTCATATGCCGA+GGG 0.617221 2_1:-62356197 Msa0216470:CDS
ATATTGAATAACCAAGAGCA+TGG 0.617616 2_1:+62352372 None:intergenic
ATTATCCTGGGAATATGCAA+TGG 0.619307 2_1:-62354957 Msa0216470:CDS
GCTTTGCAAAGAACAAGCAA+TGG 0.626293 2_1:-62355979 Msa0216470:CDS
TATGCAATGGCCTCCAAACG+GGG 0.626868 2_1:-62354944 Msa0216470:CDS
AGTCATGATCATGCATTGAG+AGG 0.627575 2_1:-62352822 Msa0216470:CDS
GAGAGGGAATTGGACAGTAA+GGG 0.627614 2_1:-62354259 Msa0216470:CDS
TATATAACATCCAATGGAGA+CGG 0.628010 2_1:-62354694 Msa0216470:CDS
TAGTGACGTCTGCTTCGTGG+TGG 0.628728 2_1:+62354320 None:intergenic
TTCCCAGGATAATAGGAAGA+CGG 0.630202 2_1:+62354967 None:intergenic
AGCAACTAAAGCACGGGCGT+AGG 0.633124 2_1:+62355956 None:intergenic
ATGGAAGGGGCCAAATGCCG+AGG 0.633588 2_1:-62355092 Msa0216470:CDS
TTGTTTCTTATGCTGACGAG+AGG 0.636767 2_1:+62354552 None:intergenic
ATGGAAATGAAGAGAACTCG+AGG 0.639282 2_1:-62356139 Msa0216470:intron
AGATTCAGGACATAGAGTGA+TGG 0.644079 2_1:+62357170 None:intergenic
GACTTGATGATTGTTGCTGG+TGG 0.645522 2_1:-62357282 Msa0216470:CDS
ATCATGTCATTATTATGTCG+AGG 0.648211 2_1:+62352735 None:intergenic
AGCATGGAAAGAAGTCGTCA+AGG 0.649026 2_1:-62354741 Msa0216470:CDS
GAAGAAATGGATAAATGATG+AGG 0.650351 2_1:-62352541 Msa0216470:CDS
TGCATTGCTTGGTTACTCGG+CGG 0.650770 2_1:+62352582 None:intergenic
ATTCCTTTATTGTGGCAGAG+AGG 0.650977 2_1:-62354276 Msa0216470:CDS
TGGAAATTCCTTGAAACACA+AGG 0.651370 2_1:-62354617 Msa0216470:CDS
ACACACTCATTCATGTGACA+TGG 0.654348 2_1:-62352272 Msa0216470:three_prime_UTR
CAACAAACGCCTCCATACCA+AGG 0.657689 2_1:-62355015 Msa0216470:CDS
TGGAGTTGAATCAGAAACTG+AGG 0.660489 2_1:+62355599 None:intergenic
GCACTCCAGAAGTTATAGAG+AGG 0.660533 2_1:-62356548 Msa0216470:CDS
TGAAAATTGTGAATGTACTG+TGG 0.661098 2_1:+62355051 None:intergenic
GAAATGGATAAATGATGAGG+CGG 0.662867 2_1:-62352538 Msa0216470:CDS
AGACATTGGAGTGCTGACCA+AGG 0.667263 2_1:-62352937 Msa0216470:CDS
CTTGCAGGTGAAGATGACTC+GGG 0.668791 2_1:-62355648 Msa0216470:CDS
AAAAGGGTAGTATCACTGAA+GGG 0.675760 2_1:-62354669 Msa0216470:CDS
ATTATAAGAATAAGACCATG+TGG 0.680429 2_1:-62352207 Msa0216470:three_prime_UTR
GGGTTGCGAAGACACCTGCA+TGG 0.691437 2_1:+62355704 None:intergenic
AAGGTGGCTTTGGTGAACCA+TGG 0.696142 2_1:+62357138 None:intergenic
CATGTGACATGGTAATCATG+TGG 0.696431 2_1:-62352261 Msa0216470:three_prime_UTR
GATAGCAATTCCAATCCACA+TGG 0.699533 2_1:+62352192 None:intergenic
GACAAAGAAAATTACCAGCG+AGG 0.702798 2_1:-62354182 Msa0216470:CDS
ACAATCTATAATGCTTCACA+TGG 0.709087 2_1:+62357506 None:intergenic
AATCACGATCGAGAACCATG+AGG 0.748541 2_1:+62353882 None:intergenic
GAAATGTGTCATATGCCGAG+GGG 0.758314 2_1:-62356196 Msa0216470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTCTATCTTT+TGG - chr2_1:62352681-62352700 Msa0216470:CDS 10.0%
!! ATAAAATATATCATATAGTT+GGG - chr2_1:62354333-62354352 Msa0216470:CDS 10.0%
!! ATGTTATATAGTTTATATTA+CGG + chr2_1:62355081-62355100 None:intergenic 10.0%
!!! TAATTGTTTTTGTTTTTTGT+TGG - chr2_1:62352447-62352466 Msa0216470:three_prime_UTR 15.0%
!! AAACATAGATGAAAAATTAT+CGG + chr2_1:62353739-62353758 None:intergenic 15.0%
!!! AAATGATTGTTCTTTTTTTT+AGG + chr2_1:62354292-62354311 None:intergenic 15.0%
!! GATAAAATATATCATATAGT+TGG - chr2_1:62354332-62354351 Msa0216470:CDS 15.0%
!! TTCCTATTAATTGAAAATAA+AGG + chr2_1:62356340-62356359 None:intergenic 15.0%
!! ATTTACAATACAACAAAATA+TGG + chr2_1:62357653-62357672 None:intergenic 15.0%
!! TTCATTGAATTGAATTGAAT+TGG - chr2_1:62352084-62352103 Msa0216470:three_prime_UTR 20.0%
!!! CAATTATTTTTGTAAAGTTG+AGG + chr2_1:62352433-62352452 None:intergenic 20.0%
!! AAAAAAAAAAAACCTTTGCA+AGG + chr2_1:62352669-62352688 None:intergenic 20.0%
!!! TTGGTTTTTGTAACAATTAT+TGG - chr2_1:62352700-62352719 Msa0216470:CDS 20.0%
!!! ATTATTGGTTTTTGATAGAT+TGG - chr2_1:62352715-62352734 Msa0216470:CDS 20.0%
!!! AAATATTTTCAATGATCTGA+TGG - chr2_1:62352834-62352853 Msa0216470:CDS 20.0%
!!! TGTGTTGGTTTATTTTATAT+AGG - chr2_1:62353198-62353217 Msa0216470:CDS 20.0%
!! TAATTAAGAACAATGATGAA+CGG + chr2_1:62353372-62353391 None:intergenic 20.0%
!!! TTTCATCTATGTTTTATTGT+AGG - chr2_1:62353745-62353764 Msa0216470:CDS 20.0%
!!! TTCATCTATGTTTTATTGTA+GGG - chr2_1:62353746-62353765 Msa0216470:CDS 20.0%
!!! AGAAAAATGTACTGTTTTAA+TGG + chr2_1:62353958-62353977 None:intergenic 20.0%
!! CTATACTTGAATTAATAGAA+AGG + chr2_1:62354435-62354454 None:intergenic 20.0%
!! CTTTCTATTAATTCAAGTAT+AGG - chr2_1:62354433-62354452 Msa0216470:CDS 20.0%
!! ATAAACTATATAACATCCAA+TGG - chr2_1:62355085-62355104 Msa0216470:CDS 20.0%
!! ATTAGATACAAGATTTCTTT+CGG + chr2_1:62356028-62356047 None:intergenic 20.0%
!! GAAAGCTATAGATAATATTA+AGG + chr2_1:62356276-62356295 None:intergenic 20.0%
!!! GACCTTTATTTTCAATTAAT+AGG - chr2_1:62356335-62356354 Msa0216470:intron 20.0%
!! TTGGTTATTCAATATTTCAA+AGG - chr2_1:62357421-62357440 Msa0216470:CDS 20.0%
!! TATGGAAAATGTATTATACT+TGG + chr2_1:62357635-62357654 None:intergenic 20.0%
!! AGACATATACACATGTATTT+TGG + chr2_1:62352137-62352156 None:intergenic 25.0%
!!! ATTTGCTGAGTTTTAAAAGT+GGG + chr2_1:62352222-62352241 None:intergenic 25.0%
!!! AATTTGCTGAGTTTTAAAAG+TGG + chr2_1:62352223-62352242 None:intergenic 25.0%
! TATAGATTGTAGATGAAGTT+TGG - chr2_1:62352292-62352311 Msa0216470:three_prime_UTR 25.0%
! CAATAATCTAACTCTATCTA+TGG - chr2_1:62352344-62352363 Msa0216470:three_prime_UTR 25.0%
! ATTGTAGTGGCAATATATAA+AGG + chr2_1:62353112-62353131 None:intergenic 25.0%
!!! ACCATAGTTTTAAATTGTAG+TGG + chr2_1:62353125-62353144 None:intergenic 25.0%
! TTAGCAAATAGTATCTTTGT+AGG - chr2_1:62353520-62353539 Msa0216470:intron 25.0%
! AACAATACTATGTGATTAAC+AGG - chr2_1:62353567-62353586 Msa0216470:intron 25.0%
! ATATCTAATTTACTGCTAAG+TGG + chr2_1:62354525-62354544 None:intergenic 25.0%
! ACAACTTAGATATCTTGTAA+AGG - chr2_1:62354590-62354609 Msa0216470:CDS 25.0%
! AATGAGGAAGAATTTATCAA+TGG - chr2_1:62355148-62355167 Msa0216470:intron 25.0%
! TATTCTTCCTGAAATTTCAT+TGG + chr2_1:62355400-62355419 None:intergenic 25.0%
! TTCAAATGATTCCTTTATTG+TGG - chr2_1:62355501-62355520 Msa0216470:intron 25.0%
! GAATTAAATTGATGTTCCAA+TGG + chr2_1:62355760-62355779 None:intergenic 25.0%
! AATCTTGTATCTAATCATGA+AGG - chr2_1:62356033-62356052 Msa0216470:intron 25.0%
! AAGACAAAGTCACATATATA+TGG + chr2_1:62356252-62356271 None:intergenic 25.0%
!! TTGAAGATTTCACTTCTTTT+TGG + chr2_1:62356677-62356696 None:intergenic 25.0%
! AAGATGTGCATAAAACAAAA+GGG - chr2_1:62356706-62356725 Msa0216470:intron 25.0%
! AAAGACTAAGAATGAAATCA+AGG - chr2_1:62356752-62356771 Msa0216470:intron 25.0%
! AAATATCTTGAATGTTTCTC+CGG + chr2_1:62356879-62356898 None:intergenic 25.0%
!!! GTATGTATTAATGGTTTGTT+AGG + chr2_1:62357098-62357117 None:intergenic 25.0%
! ATTATAAGAATAAGACCATG+TGG - chr2_1:62357578-62357597 Msa0216470:five_prime_UTR 25.0%
! ATATTCTTTCACAATGTTCA+AGG - chr2_1:62357707-62357726 Msa0216470:five_prime_UTR 25.0%
AGTTAACAAGAACGTGAAAA+TGG - chr2_1:62352017-62352036 Msa0216470:three_prime_UTR 30.0%
TCCAAATCTAAGAATGTGTT+GGG + chr2_1:62352057-62352076 None:intergenic 30.0%
ATCCAAATCTAAGAATGTGT+TGG + chr2_1:62352058-62352077 None:intergenic 30.0%
ACTAACACATTATGTTCTGT+TGG - chr2_1:62352190-62352209 Msa0216470:three_prime_UTR 30.0%
ACAATCTATAATGCTTCACA+TGG + chr2_1:62352282-62352301 None:intergenic 30.0%
GTTGAAAGCTCAAACTTTAA+AGG + chr2_1:62352325-62352344 None:intergenic 30.0%
AAAAGAACCTTGTTCTTGTT+GGG + chr2_1:62352410-62352429 None:intergenic 30.0%
!! TTAATGAAAGACTAGCTTCT+GGG - chr2_1:62352528-62352547 Msa0216470:CDS 30.0%
! CATTTAAGGTGAGAAACAAA+CGG + chr2_1:62352563-62352582 None:intergenic 30.0%
! TCTGATCTTTTGCACATTTA+AGG + chr2_1:62352577-62352596 None:intergenic 30.0%
GCAAAAGATCAGATTTCAAA+AGG - chr2_1:62352584-62352603 Msa0216470:CDS 30.0%
AAAGATCAGATTTCAAAAGG+TGG - chr2_1:62352587-62352606 Msa0216470:CDS 30.0%
AAAAAAAAACCTTTGCAAGG+TGG + chr2_1:62352666-62352685 None:intergenic 30.0%
! TGTGACTTTGGAAATAGTTA+TGG - chr2_1:62352803-62352822 Msa0216470:CDS 30.0%
!!! ATGAGTTTTTTATCTCACCA+AGG - chr2_1:62352942-62352961 Msa0216470:CDS 30.0%
ACTAAAAGAGGATTAATCCT+TGG + chr2_1:62352962-62352981 None:intergenic 30.0%
!! TTAATCCTCTTTTAGTTACC+AGG - chr2_1:62352966-62352985 Msa0216470:CDS 30.0%
!! TAATCCTCTTTTAGTTACCA+GGG - chr2_1:62352967-62352986 Msa0216470:CDS 30.0%
! GCCACTACAATTTAAAACTA+TGG - chr2_1:62353121-62353140 Msa0216470:CDS 30.0%
ACAATGATGTTTGTTTGTGT+TGG - chr2_1:62353183-62353202 Msa0216470:CDS 30.0%
AACAATGATGAACGGAATAA+AGG + chr2_1:62353364-62353383 None:intergenic 30.0%
TTCTTAATTAAACTTCCTCG+TGG - chr2_1:62353382-62353401 Msa0216470:CDS 30.0%
AGATGTGGGAAAAAAAATAG+CGG + chr2_1:62353439-62353458 None:intergenic 30.0%
CAAAGATGTGTGCATATATA+AGG + chr2_1:62353687-62353706 None:intergenic 30.0%
GAAACAAATAAGATCATCCA+TGG + chr2_1:62353871-62353890 None:intergenic 30.0%
TATAATTTCCTGTCATGTGT+AGG - chr2_1:62353985-62354004 Msa0216470:CDS 30.0%
ATAATTTCCTGTCATGTGTA+GGG - chr2_1:62353986-62354005 Msa0216470:CDS 30.0%
!! TTTTAGGAACACTTTTACTC+AGG + chr2_1:62354276-62354295 None:intergenic 30.0%
TACAACTTGTGTCTAAATAC+TGG - chr2_1:62354466-62354485 Msa0216470:CDS 30.0%
!!! CCAGTATTTTTTTTGAAGGA+TGG + chr2_1:62354497-62354516 None:intergenic 30.0%
CCATCCTTCAAAAAAAATAC+TGG - chr2_1:62354494-62354513 Msa0216470:CDS 30.0%
!!! CAGTCCAGTATTTTTTTTGA+AGG + chr2_1:62354501-62354520 None:intergenic 30.0%
CAATAAGAGTAACAAACTTC+TGG + chr2_1:62354618-62354637 None:intergenic 30.0%
TGAAAATTGTGAATGTACTG+TGG + chr2_1:62354737-62354756 None:intergenic 30.0%
! ACAGTACATTCACAATTTTC+AGG - chr2_1:62354736-62354755 Msa0216470:CDS 30.0%
! CAGTACATTCACAATTTTCA+GGG - chr2_1:62354737-62354756 Msa0216470:CDS 30.0%
GAAGAAAAACAAGAAATCTC+AGG - chr2_1:62354898-62354917 Msa0216470:CDS 30.0%
AAACAAGAAATCTCAGGTAT+TGG - chr2_1:62354904-62354923 Msa0216470:CDS 30.0%
AAGCAAAAAGAACTCTTCAA+CGG - chr2_1:62355003-62355022 Msa0216470:CDS 30.0%
TATATAACATCCAATGGAGA+CGG - chr2_1:62355091-62355110 Msa0216470:CDS 30.0%
GCAAAAAGGTAATAACAACT+GGG - chr2_1:62355312-62355331 Msa0216470:intron 30.0%
GATGATTCTACTCATGATAT+AGG - chr2_1:62355367-62355386 Msa0216470:intron 30.0%
AAAACAGCCAATGAAATTTC+AGG - chr2_1:62355390-62355409 Msa0216470:intron 30.0%
GTGTTGAATATTTCAACGAA+GGG - chr2_1:62355557-62355576 Msa0216470:intron 30.0%
ATCTCAGAGAAATGATGAAT+CGG - chr2_1:62355636-62355655 Msa0216470:CDS 30.0%
CGAAGCTAACAAAAAGATTT+CGG - chr2_1:62355993-62356012 Msa0216470:CDS 30.0%
! TGGGAAAATTTCAAGTAAAG+AGG - chr2_1:62356086-62356105 Msa0216470:intron 30.0%
!!! GATTTGGTTTTAGATGCATT+TGG + chr2_1:62356126-62356145 None:intergenic 30.0%
GCTTTCATTTGCAAATTCAT+AGG - chr2_1:62356290-62356309 Msa0216470:intron 30.0%
GAAGATGTGCATAAAACAAA+AGG - chr2_1:62356705-62356724 Msa0216470:intron 30.0%
TAAGAATGAAATCAAGGCTT+CGG - chr2_1:62356758-62356777 Msa0216470:intron 30.0%
GAACAAAACAACAACAATCA+TGG - chr2_1:62356819-62356838 Msa0216470:intron 30.0%
AATCATGGTTTGAAAGACAT+TGG - chr2_1:62356834-62356853 Msa0216470:intron 30.0%
ATCATGTCATTATTATGTCG+AGG + chr2_1:62357053-62357072 None:intergenic 30.0%
TTCACAGCAGTATGTATTAA+TGG + chr2_1:62357107-62357126 None:intergenic 30.0%
!! ATTTGAATCTCTGAGACTTT+AGG + chr2_1:62357173-62357192 None:intergenic 30.0%
GAAGAAATGGATAAATGATG+AGG - chr2_1:62357244-62357263 Msa0216470:CDS 30.0%
TTCCAAAGAAGATAAGCTTA+CGG + chr2_1:62357298-62357317 None:intergenic 30.0%
!! CAAAAAGTATCAATCCACAA+AGG + chr2_1:62357336-62357355 None:intergenic 30.0%
!! CTTTGTGGATTGATACTTTT+TGG - chr2_1:62357334-62357353 Msa0216470:intron 30.0%
!! GATTGATACTTTTTGGCAAA+GGG - chr2_1:62357341-62357360 Msa0216470:intron 30.0%
!! ATTGATACTTTTTGGCAAAG+GGG - chr2_1:62357342-62357361 Msa0216470:intron 30.0%
ATATTGAATAACCAAGAGCA+TGG + chr2_1:62357416-62357435 None:intergenic 30.0%
TTGGAATTGCTATCATACTA+AGG - chr2_1:62357602-62357621 Msa0216470:five_prime_UTR 30.0%
! GTTTCTGTGAGTAGTAATTT+TGG - chr2_1:62357732-62357751 Msa0216470:five_prime_UTR 30.0%
AAGCTAAACAAACTGGAAAA+TGG + chr2_1:62357792-62357811 None:intergenic 30.0%
CCAATTAAAGCTAAACAAAC+TGG + chr2_1:62357799-62357818 None:intergenic 30.0%
!! CCAGTTTGTTTAGCTTTAAT+TGG - chr2_1:62357796-62357815 Msa0216470:five_prime_UTR 30.0%
AACCTAAAGCAAAACTCTCT+TGG - chr2_1:62351988-62352007 Msa0216470:three_prime_UTR 35.0%
! ATCCAAGAGAGTTTTGCTTT+AGG + chr2_1:62351993-62352012 None:intergenic 35.0%
ACCCAACACATTCTTAGATT+TGG - chr2_1:62352053-62352072 Msa0216470:three_prime_UTR 35.0%
CACATTATGTTCTGTTGGAT+TGG - chr2_1:62352195-62352214 Msa0216470:three_prime_UTR 35.0%
GCATGATCAAGATAAGAACT+TGG + chr2_1:62352372-62352391 None:intergenic 35.0%
AAAGAACCTTGTTCTTGTTG+GGG + chr2_1:62352409-62352428 None:intergenic 35.0%
GAAAAGAACCTTGTTCTTGT+TGG + chr2_1:62352411-62352430 None:intergenic 35.0%
!! GTTAATGAAAGACTAGCTTC+TGG - chr2_1:62352527-62352546 Msa0216470:CDS 35.0%
CTACATTGAGAACACTTTCA+AGG + chr2_1:62352916-62352935 None:intergenic 35.0%
!!! CGGATCAAGGTTTTAAATTG+CGG - chr2_1:62352990-62353009 Msa0216470:CDS 35.0%
! AGCAACTTTTCACAATGTCA+AGG + chr2_1:62353034-62353053 None:intergenic 35.0%
! CTACAATTGCATTGCGATTT+TGG - chr2_1:62353074-62353093 Msa0216470:CDS 35.0%
ACAAACCTCTCTATAACTTC+TGG + chr2_1:62353245-62353264 None:intergenic 35.0%
AGTCAATCAAATGAAGCAGA+AGG - chr2_1:62353302-62353321 Msa0216470:CDS 35.0%
ATCAAATGAAGCAGAAGGTA+TGG - chr2_1:62353307-62353326 Msa0216470:CDS 35.0%
ATGGGATCTCATAATCATAC+TGG - chr2_1:62353330-62353349 Msa0216470:CDS 35.0%
TCATAATCATACTGGTGTCT+CGG - chr2_1:62353338-62353357 Msa0216470:CDS 35.0%
GTAAAGCTTCCGTGTAAAAT+CGG + chr2_1:62353464-62353483 None:intergenic 35.0%
ACTATTTCCTCCAATCAAGA+TGG - chr2_1:62353627-62353646 Msa0216470:CDS 35.0%
TTCATTTCCATCTTGATTGG+AGG + chr2_1:62353637-62353656 None:intergenic 35.0%
CTCTTCATTTCCATCTTGAT+TGG + chr2_1:62353640-62353659 None:intergenic 35.0%
AAGAGAACTCGAGGTATATT+TGG - chr2_1:62353655-62353674 Msa0216470:CDS 35.0%
AAAATCCAGCAACTAAAGCA+CGG + chr2_1:62353839-62353858 None:intergenic 35.0%
! TGGATTTTATCCAGAATCCA+TGG - chr2_1:62353851-62353870 Msa0216470:CDS 35.0%
ATAAGATCATCCATGGATTC+TGG + chr2_1:62353864-62353883 None:intergenic 35.0%
AAAAGAATGAAGACAAGCTG+TGG - chr2_1:62354042-62354061 Msa0216470:CDS 35.0%
TGTCCTTAAGTAAGGCAATA+CGG + chr2_1:62354105-62354124 None:intergenic 35.0%
ATTCCAGATGTCCTTAAGTA+AGG + chr2_1:62354113-62354132 None:intergenic 35.0%
GACTCGGGAAGTAAAATAAA+TGG - chr2_1:62354152-62354171 Msa0216470:CDS 35.0%
GGGAAGTAAAATAAATGGCA+CGG - chr2_1:62354157-62354176 Msa0216470:CDS 35.0%
GGAAGTAAAATAAATGGCAC+GGG - chr2_1:62354158-62354177 Msa0216470:CDS 35.0%
TTGCATATTCCCAGGATAAT+AGG + chr2_1:62354828-62354847 None:intergenic 35.0%
ATTATCCTGGGAATATGCAA+TGG - chr2_1:62354828-62354847 Msa0216470:CDS 35.0%
AAAAGGGTAGTATCACTGAA+GGG - chr2_1:62355116-62355135 Msa0216470:CDS 35.0%
TGGAAATTCCTTGAAACACA+AGG - chr2_1:62355168-62355187 Msa0216470:intron 35.0%
TTGAACCATTTAGCATGTCA+TGG + chr2_1:62355273-62355292 None:intergenic 35.0%
ATGACATGCTAAATGGTTCA+AGG - chr2_1:62355272-62355291 Msa0216470:intron 35.0%
GGCAAAAAGGTAATAACAAC+TGG - chr2_1:62355311-62355330 Msa0216470:intron 35.0%
ATGAGCAAGAAGTTTGAGAA+TGG - chr2_1:62355424-62355443 Msa0216470:intron 35.0%
CGTGTTGAATATTTCAACGA+AGG - chr2_1:62355556-62355575 Msa0216470:intron 35.0%
TGAATATTTCAACGAAGGGA+AGG - chr2_1:62355561-62355580 Msa0216470:intron 35.0%
TCTCAGAGAAATGATGAATC+GGG - chr2_1:62355637-62355656 Msa0216470:CDS 35.0%
!!! CCTTTCTTGTTTTTCTCTAC+AGG + chr2_1:62355700-62355719 None:intergenic 35.0%
CCTGTAGAGAAAAACAAGAA+AGG - chr2_1:62355697-62355716 Msa0216470:CDS 35.0%
AACAGCTTCTGATATCAGTT+TGG - chr2_1:62355783-62355802 Msa0216470:intron 35.0%
TTATCCATTTCCATTCTCCA+AGG + chr2_1:62355952-62355971 None:intergenic 35.0%
! CGCTCCAGTATTTTTCTTAT+CGG + chr2_1:62356061-62356080 None:intergenic 35.0%
AAAAATACTGGAGCGAAATC+TGG - chr2_1:62356066-62356085 Msa0216470:intron 35.0%
AAAATACTGGAGCGAAATCT+GGG - chr2_1:62356067-62356086 Msa0216470:intron 35.0%
TCTTGACATGACATCAGATT+TGG + chr2_1:62356142-62356161 None:intergenic 35.0%
CACATATATATGGTCGAGAA+TGG + chr2_1:62356242-62356261 None:intergenic 35.0%
CCATTAGATGGATGAATCTT+AGG + chr2_1:62356489-62356508 None:intergenic 35.0%
CCTAAGATTCATCCATCTAA+TGG - chr2_1:62356486-62356505 Msa0216470:CDS 35.0%
TTCTTAGTCTCTCCATTAGA+TGG + chr2_1:62356501-62356520 None:intergenic 35.0%
TCACCTAATCAAGCAAATTC+AGG - chr2_1:62356594-62356613 Msa0216470:intron 35.0%
!! GTTTTGTTCAACTGCTTTTG+TGG + chr2_1:62356808-62356827 None:intergenic 35.0%
GACAAGTTATCTTCACTTCA+TGG - chr2_1:62357014-62357033 Msa0216470:intron 35.0%
ACATACTGCTGTGAATTCAA+AGG - chr2_1:62357112-62357131 Msa0216470:intron 35.0%
TGTGAATTCAAAGGTGAATC+AGG - chr2_1:62357121-62357140 Msa0216470:intron 35.0%
TTATCCATTTCTTCCTGTTG+TGG + chr2_1:62357238-62357257 None:intergenic 35.0%
GAAATGGATAAATGATGAGG+CGG - chr2_1:62357247-62357266 Msa0216470:CDS 35.0%
TTCCGTAAGCTTATCTTCTT+TGG - chr2_1:62357293-62357312 Msa0216470:intron 35.0%
! AGCTTATCTTCTTTGGAAGA+AGG - chr2_1:62357300-62357319 Msa0216470:intron 35.0%
!! GGATTGATACTTTTTGGCAA+AGG - chr2_1:62357340-62357359 Msa0216470:intron 35.0%
ACTTTCTACTGAGCTAAGAA+TGG + chr2_1:62357461-62357480 None:intergenic 35.0%
!! TTAGCTCAGTAGAAAGTGTT+TGG - chr2_1:62357464-62357483 Msa0216470:five_prime_UTR 35.0%
AAGAATAAGACCATGTGGAT+TGG - chr2_1:62357583-62357602 Msa0216470:five_prime_UTR 35.0%
ATCTAAGAATGTGTTGGGTG+TGG + chr2_1:62352052-62352071 None:intergenic 40.0%
! TGTGACTTGATGATTGTTGC+TGG - chr2_1:62352500-62352519 Msa0216470:CDS 40.0%
AGATTCAGGACATAGAGTGA+TGG + chr2_1:62352618-62352637 None:intergenic 40.0%
CATGGAGCATATGTAGATTC+AGG + chr2_1:62352632-62352651 None:intergenic 40.0%
CTGAATCTACATATGCTCCA+TGG - chr2_1:62352630-62352649 Msa0216470:CDS 40.0%
ATCACTCATGTGTGTGACTT+TGG - chr2_1:62352791-62352810 Msa0216470:CDS 40.0%
GAGGTTTGTGACCATAGAAA+AGG - chr2_1:62353256-62353275 Msa0216470:CDS 40.0%
! CTGCACAATCTCCTTTTCTA+TGG + chr2_1:62353270-62353289 None:intergenic 40.0%
AAGGAGATTGTGCAGATTGA+AGG - chr2_1:62353275-62353294 Msa0216470:CDS 40.0%
! AATGAAGCAGAAGGTATGGA+TGG - chr2_1:62353311-62353330 Msa0216470:CDS 40.0%
! ATGAAGCAGAAGGTATGGAT+GGG - chr2_1:62353312-62353331 Msa0216470:CDS 40.0%
GTGTAAAATCGGACAGATGT+GGG + chr2_1:62353453-62353472 None:intergenic 40.0%
! CACATCTGTCCGATTTTACA+CGG - chr2_1:62353452-62353471 Msa0216470:intron 40.0%
ATGGAAATGAAGAGAACTCG+AGG - chr2_1:62353646-62353665 Msa0216470:CDS 40.0%
CACACATCTTTGTACTCTTC+AGG - chr2_1:62353695-62353714 Msa0216470:CDS 40.0%
! GATTGTCTAGAACACGTTGA+AGG + chr2_1:62353776-62353795 None:intergenic 40.0%
GCTTTGCAAAGAACAAGCAA+TGG - chr2_1:62353806-62353825 Msa0216470:CDS 40.0%
AAATCCAGCAACTAAAGCAC+GGG + chr2_1:62353838-62353857 None:intergenic 40.0%
! ATTTGTTTCGCTGACGCTTT+TGG - chr2_1:62353882-62353901 Msa0216470:CDS 40.0%
!!! CTTTTGGAGCTTCACGTTTA+AGG - chr2_1:62353898-62353917 Msa0216470:CDS 40.0%
TTAAGGTCTGCGAGCAATAT+TGG - chr2_1:62353915-62353934 Msa0216470:CDS 40.0%
AACCCGTATTGCCTTACTTA+AGG - chr2_1:62354099-62354118 Msa0216470:CDS 40.0%
GTCCTTAAGTAAGGCAATAC+GGG + chr2_1:62354104-62354123 None:intergenic 40.0%
TTGCCTTACTTAAGGACATC+TGG - chr2_1:62354107-62354126 Msa0216470:CDS 40.0%
! ACATCTGGAATCATACTTGC+AGG - chr2_1:62354122-62354141 Msa0216470:CDS 40.0%
TGGAGTTGAATCAGAAACTG+AGG + chr2_1:62354189-62354208 None:intergenic 40.0%
! ATCCACTTGGTAGTTTACCT+TGG + chr2_1:62354235-62354254 None:intergenic 40.0%
! ACCAAGTGGATTCAGTATGT+TGG - chr2_1:62354244-62354263 Msa0216470:CDS 40.0%
ACCAACATACTGAATCCACT+TGG + chr2_1:62354248-62354267 None:intergenic 40.0%
ACCAATTGTGCATACGTCTT+CGG - chr2_1:62354390-62354409 Msa0216470:CDS 40.0%
GTTCAAACACCATCATCTGA+TGG - chr2_1:62354674-62354693 Msa0216470:CDS 40.0%
AAACACCATCATCTGATGGA+AGG - chr2_1:62354678-62354697 Msa0216470:CDS 40.0%
AACACCATCATCTGATGGAA+GGG - chr2_1:62354679-62354698 Msa0216470:CDS 40.0%
! ATGTACTGTGGATGATGGTT+CGG + chr2_1:62354725-62354744 None:intergenic 40.0%
TGTGAATGTACTGTGGATGA+TGG + chr2_1:62354730-62354749 None:intergenic 40.0%
TACATGTATCCTTGGTATGG+AGG + chr2_1:62354782-62354801 None:intergenic 40.0%
GGATACATGTATCCTTGGTA+TGG + chr2_1:62354785-62354804 None:intergenic 40.0%
TACCAAGGATACATGTATCC+TGG - chr2_1:62354785-62354804 Msa0216470:CDS 40.0%
TACCAGGATACATGTATCCT+TGG + chr2_1:62354790-62354809 None:intergenic 40.0%
ATACATGTATCCTGGTATGC+AGG - chr2_1:62354793-62354812 Msa0216470:CDS 40.0%
TTCCGTCTTCCTATTATCCT+GGG - chr2_1:62354816-62354835 Msa0216470:CDS 40.0%
TTCCCAGGATAATAGGAAGA+CGG + chr2_1:62354821-62354840 None:intergenic 40.0%
AATATGCAATGGCCTCCAAA+CGG - chr2_1:62354839-62354858 Msa0216470:CDS 40.0%
GAAAAGGGTAGTATCACTGA+AGG - chr2_1:62355115-62355134 Msa0216470:CDS 40.0%
TTCCTTGAAACACAAGGTAG+AGG - chr2_1:62355174-62355193 Msa0216470:intron 40.0%
TTCCTCTACCTTGTGTTTCA+AGG + chr2_1:62355179-62355198 None:intergenic 40.0%
! TTGTTTCTTATGCTGACGAG+AGG + chr2_1:62355236-62355255 None:intergenic 40.0%
AAGCACCATGACATGCTAAA+TGG - chr2_1:62355265-62355284 Msa0216470:intron 40.0%
!! TCAAGGAATGCTGATTCCAA+CGG - chr2_1:62355289-62355308 Msa0216470:intron 40.0%
! GTTATTACCTTTTTGCCCGT+TGG + chr2_1:62355308-62355327 None:intergenic 40.0%
CGTCTCTCAAAAGAAGATTC+TGG + chr2_1:62355345-62355364 None:intergenic 40.0%
GCAAGAAGTTTGAGAATGGA+AGG - chr2_1:62355428-62355447 Msa0216470:intron 40.0%
ATTCCTTTATTGTGGCAGAG+AGG - chr2_1:62355509-62355528 Msa0216470:intron 40.0%
TTCCTTTATTGTGGCAGAGA+GGG - chr2_1:62355510-62355529 Msa0216470:intron 40.0%
TATTTCAACGAAGGGAAGGA+TGG - chr2_1:62355565-62355584 Msa0216470:intron 40.0%
GACAAAGAAAATTACCAGCG+AGG - chr2_1:62355603-62355622 Msa0216470:CDS 40.0%
AGATAACAACAATTCCTCGC+TGG + chr2_1:62355620-62355639 None:intergenic 40.0%
! AGTTTGGTTTCAGACGTTGT+CGG - chr2_1:62355799-62355818 Msa0216470:intron 40.0%
TTCACAAACGGTACACAAGA+AGG - chr2_1:62355832-62355851 Msa0216470:intron 40.0%
GTCAAGAAGTAGAACATTGC+CGG - chr2_1:62356155-62356174 Msa0216470:CDS 40.0%
TCAAGAAGTAGAACATTGCC+GGG - chr2_1:62356156-62356175 Msa0216470:CDS 40.0%
TACAGCTACGAAGAGCAAAT+CGG - chr2_1:62356188-62356207 Msa0216470:CDS 40.0%
TACGAAGAGCAAATCGGAAA+AGG - chr2_1:62356194-62356213 Msa0216470:CDS 40.0%
GAGAAGAGTTAATGTTGCAG+CGG - chr2_1:62356379-62356398 Msa0216470:intron 40.0%
! CTTCTTCAAGGCACTTCTTT+CGG + chr2_1:62356418-62356437 None:intergenic 40.0%
TTCTGTTCCAGTCTTCTTCA+AGG + chr2_1:62356430-62356449 None:intergenic 40.0%
! AGACTTCTTTGACTTCAGCA+AGG - chr2_1:62356454-62356473 Msa0216470:intron 40.0%
! TCTTTGACTTCAGCAAGGAA+AGG - chr2_1:62356459-62356478 Msa0216470:intron 40.0%
! CTTTGACTTCAGCAAGGAAA+GGG - chr2_1:62356460-62356479 Msa0216470:intron 40.0%
AACTGAACAAACCAGTCCTT+AGG - chr2_1:62356520-62356539 Msa0216470:CDS 40.0%
AAACCTTCTGCTGAGTTACT+CGG + chr2_1:62356575-62356594 None:intergenic 40.0%
! GGACCTGAATTTGCTTGATT+AGG + chr2_1:62356600-62356619 None:intergenic 40.0%
! ACCTTATTTGCCTTCAAGGA+AGG + chr2_1:62356633-62356652 None:intergenic 40.0%
! AGGTACCTTATTTGCCTTCA+AGG + chr2_1:62356637-62356656 None:intergenic 40.0%
!! TGGAGCTGTTTCTTCAGTAA+AGG + chr2_1:62356657-62356676 None:intergenic 40.0%
AAATATCAGCCAACTTCGCA+CGG - chr2_1:62356926-62356945 Msa0216470:intron 40.0%
TCTTGCATTGCTTGGTTACT+CGG + chr2_1:62357209-62357228 None:intergenic 40.0%
! GGATTGATTCTTGCATTGCT+TGG + chr2_1:62357217-62357236 None:intergenic 40.0%
TGCAAGAATCAATCCACAAC+AGG - chr2_1:62357222-62357241 Msa0216470:CDS 40.0%
CAATCCACAACAGGAAGAAA+TGG - chr2_1:62357231-62357250 Msa0216470:CDS 40.0%
GACTCTTCAAAAGTAGCGAA+AGG - chr2_1:62357269-62357288 Msa0216470:CDS 40.0%
GTTCTCTTTATCCATGCTCT+TGG - chr2_1:62357402-62357421 Msa0216470:CDS 40.0%
ACACACTCATTCATGTGACA+TGG - chr2_1:62357513-62357532 Msa0216470:five_prime_UTR 40.0%
CATGTGACATGGTAATCATG+TGG - chr2_1:62357524-62357543 Msa0216470:five_prime_UTR 40.0%
GATAGCAATTCCAATCCACA+TGG + chr2_1:62357596-62357615 None:intergenic 40.0%
AGAATGTGTTGGGTGTGGTT+AGG + chr2_1:62352047-62352066 None:intergenic 45.0%
AACTCACCCCAACAAGAACA+AGG - chr2_1:62352400-62352419 Msa0216470:three_prime_UTR 45.0%
! GACTTGATGATTGTTGCTGG+TGG - chr2_1:62352503-62352522 Msa0216470:CDS 45.0%
AAACCTTTGCAAGGTGGCTT+TGG + chr2_1:62352660-62352679 None:intergenic 45.0%
!! TCCTCTTTTAGTTACCAGGG+CGG - chr2_1:62352970-62352989 Msa0216470:CDS 45.0%
! TTTAAAACCTTGATCCGCCC+TGG + chr2_1:62352987-62353006 None:intergenic 45.0%
GCACTCCAGAAGTTATAGAG+AGG - chr2_1:62353237-62353256 Msa0216470:CDS 45.0%
ATTCCTTCACGTTTACCACG+AGG + chr2_1:62353400-62353419 None:intergenic 45.0%
CGTGTAAAATCGGACAGATG+TGG + chr2_1:62353454-62353473 None:intergenic 45.0%
AGGAAATGTGTCATATGCCG+AGG - chr2_1:62353587-62353606 Msa0216470:intron 45.0%
GGAAATGTGTCATATGCCGA+GGG - chr2_1:62353588-62353607 Msa0216470:intron 45.0%
GAAATGTGTCATATGCCGAG+GGG - chr2_1:62353589-62353608 Msa0216470:intron 45.0%
GAATGAAGACAAGCTGTGGA+TGG - chr2_1:62354046-62354065 Msa0216470:CDS 45.0%
ACTTGCAGGTGAAGATGACT+CGG - chr2_1:62354136-62354155 Msa0216470:CDS 45.0%
ATGTCGAAACTTGCATGGCT+TGG + chr2_1:62354209-62354228 None:intergenic 45.0%
AGCCATGCAAGTTTCGACAT+TGG - chr2_1:62354209-62354228 Msa0216470:CDS 45.0%
!! AGTGCAAAAGCATCATGGGA+AGG + chr2_1:62354368-62354387 None:intergenic 45.0%
!! GTCGAGTGCAAAAGCATCAT+GGG + chr2_1:62354372-62354391 None:intergenic 45.0%
GATGGTGTTTGAACTGATGC+TGG + chr2_1:62354668-62354687 None:intergenic 45.0%
ACACCATCATCTGATGGAAG+GGG - chr2_1:62354680-62354699 Msa0216470:CDS 45.0%
GTTCCGTCTTCCTATTATCC+TGG - chr2_1:62354815-62354834 Msa0216470:CDS 45.0%
ATATGCAATGGCCTCCAAAC+GGG - chr2_1:62354840-62354859 Msa0216470:CDS 45.0%
AGCATGGAAAGAAGTCGTCA+AGG - chr2_1:62355044-62355063 Msa0216470:CDS 45.0%
ATCCAATGGAGACGGAGAAA+AGG - chr2_1:62355099-62355118 Msa0216470:CDS 45.0%
TCCAATGGAGACGGAGAAAA+GGG - chr2_1:62355100-62355119 Msa0216470:CDS 45.0%
TGAAGGGAGTTTGTCGAATG+AGG - chr2_1:62355132-62355151 Msa0216470:CDS 45.0%
!! CAAGGAATGCTGATTCCAAC+GGG - chr2_1:62355290-62355309 Msa0216470:intron 45.0%
! TTTTAGTGACGTCTGCTTCG+TGG + chr2_1:62355471-62355490 None:intergenic 45.0%
TTCCCTCTCTGCCACAATAA+AGG + chr2_1:62355515-62355534 None:intergenic 45.0%
TATTGTGGCAGAGAGGGAAT+TGG - chr2_1:62355516-62355535 Msa0216470:intron 45.0%
AGAGAGGGAATTGGACAGTA+AGG - chr2_1:62355525-62355544 Msa0216470:intron 45.0%
GAGAGGGAATTGGACAGTAA+GGG - chr2_1:62355526-62355545 Msa0216470:intron 45.0%
CATGATTCAAGCTCGACCAT+TGG - chr2_1:62355741-62355760 Msa0216470:CDS 45.0%
! ATCTGGCTCGTGGGAAATTA+AGG + chr2_1:62355878-62355897 None:intergenic 45.0%
AGAACCATGAGGAGATCATC+TGG + chr2_1:62355895-62355914 None:intergenic 45.0%
AATCACGATCGAGAACCATG+AGG + chr2_1:62355906-62355925 None:intergenic 45.0%
AGCACCTTGGAGAATGGAAA+TGG - chr2_1:62355945-62355964 Msa0216470:CDS 45.0%
!! GGCGCCGATAAGAAAAATAC+TGG - chr2_1:62356054-62356073 Msa0216470:intron 45.0%
!! AGAAGTGCCTTGAAGAAGAC+TGG - chr2_1:62356420-62356439 Msa0216470:intron 45.0%
AACCTTCTGCTGAGTTACTC+GGG + chr2_1:62356574-62356593 None:intergenic 45.0%
TTCAAGGAAGGCTTCTTGGT+TGG + chr2_1:62356621-62356640 None:intergenic 45.0%
AACCAAGAAGCCTTCCTTGA+AGG - chr2_1:62356620-62356639 Msa0216470:intron 45.0%
GCCTTCCTTGAAGGCAAATA+AGG - chr2_1:62356629-62356648 Msa0216470:intron 45.0%
! CTTAGTCTTTGCGCTACTCT+TGG + chr2_1:62356742-62356761 None:intergenic 45.0%
TTTGTGGCATCAGGTTTGAC+AGG + chr2_1:62356792-62356811 None:intergenic 45.0%
!! TCAACTGCTTTTGTGGCATC+AGG + chr2_1:62356801-62356820 None:intergenic 45.0%
AAGGAGCTGAAGAACCTTTG+TGG - chr2_1:62357319-62357338 Msa0216470:intron 45.0%
ATGTGTTGGGTGTGGTTAGG+AGG + chr2_1:62352044-62352063 None:intergenic 50.0%
!! AAGGTGGCTTTGGTGAACCA+TGG + chr2_1:62352650-62352669 None:intergenic 50.0%
TCACCAAAGCCACCTTGCAA+AGG - chr2_1:62352654-62352673 Msa0216470:CDS 50.0%
TCCGCCCTGGTAACTAAAAG+AGG + chr2_1:62352974-62352993 None:intergenic 50.0%
TTAGTTACCAGGGCGGATCA+AGG - chr2_1:62352977-62352996 Msa0216470:CDS 50.0%
CTTCCTCGTGGTAAACGTGA+AGG - chr2_1:62353394-62353413 Msa0216470:CDS 50.0%
CATGCTTCCCTACACATGAC+AGG + chr2_1:62353996-62354015 None:intergenic 50.0%
CTTGCAGGTGAAGATGACTC+GGG - chr2_1:62354137-62354156 Msa0216470:CDS 50.0%
GGCCAATGTCGAAACTTGCA+TGG + chr2_1:62354214-62354233 None:intergenic 50.0%
GCAAGTTTCGACATTGGCCA+AGG - chr2_1:62354215-62354234 Msa0216470:CDS 50.0%
GGCCAAGGTAAACTACCAAG+TGG - chr2_1:62354230-62354249 Msa0216470:CDS 50.0%
!! GGTCGAGTGCAAAAGCATCA+TGG + chr2_1:62354373-62354392 None:intergenic 50.0%
GCCGAAGACGTATGCACAAT+TGG + chr2_1:62354394-62354413 None:intergenic 50.0%
CAACAAACGCCTCCATACCA+AGG - chr2_1:62354770-62354789 Msa0216470:CDS 50.0%
TATGCAATGGCCTCCAAACG+GGG - chr2_1:62354841-62354860 Msa0216470:CDS 50.0%
ATTTCAGAGCGATCCCCGTT+TGG + chr2_1:62354857-62354876 None:intergenic 50.0%
!! AAACGGGGATCGCTCTGAAA+TGG - chr2_1:62354856-62354875 Msa0216470:CDS 50.0%
CGTCTTCGCAACAAGAAGCA+TGG - chr2_1:62355028-62355047 Msa0216470:CDS 50.0%
! ACCCTTTTCTCCGTCTCCAT+TGG + chr2_1:62355104-62355123 None:intergenic 50.0%
! GCTGATTCCAACGGGCAAAA+AGG - chr2_1:62355298-62355317 Msa0216470:intron 50.0%
GGTGCGGCTGAATTCACAAA+CGG - chr2_1:62355820-62355839 Msa0216470:intron 50.0%
TACAGCAGAATGCAGCACCT+TGG - chr2_1:62355932-62355951 Msa0216470:CDS 50.0%
GAATGCAGCACCTTGGAGAA+TGG - chr2_1:62355939-62355958 Msa0216470:CDS 50.0%
! ATGGTGGAACTCCTAAGGAC+TGG + chr2_1:62356534-62356553 None:intergenic 50.0%
!! GATCGATGGTGGAACTCCTA+AGG + chr2_1:62356539-62356558 None:intergenic 50.0%
TGCCTTCAAGGAAGGCTTCT+TGG + chr2_1:62356625-62356644 None:intergenic 50.0%
!! AGACATTGGAGTGCTGACCA+AGG - chr2_1:62356848-62356867 Msa0216470:intron 50.0%
ATGTTTCTCCGGTGATGCCT+TGG + chr2_1:62356868-62356887 None:intergenic 50.0%
TGCATTGCTTGGTTACTCGG+CGG + chr2_1:62357206-62357225 None:intergenic 50.0%
! TGACCTTTTGACACGCCCCT+CGG + chr2_1:62353607-62353626 None:intergenic 55.0%
AGCAACTAAAGCACGGGCGT+AGG + chr2_1:62353832-62353851 None:intergenic 55.0%
TACGCCCGTGCTTTAGTTGC+TGG - chr2_1:62353831-62353850 Msa0216470:CDS 55.0%
GGATGAGATTGCAGCCATGC+AGG - chr2_1:62354067-62354086 Msa0216470:CDS 55.0%
ATACGTCTTCGGCTGCACAG+CGG - chr2_1:62354401-62354420 Msa0216470:CDS 55.0%
TGGCCCCTTCCATCAGATGA+TGG + chr2_1:62354686-62354705 None:intergenic 55.0%
! TGATGGTTCGGCCATGACCT+CGG + chr2_1:62354713-62354732 None:intergenic 55.0%
GAAGACGGAACCTGCATACC+AGG + chr2_1:62354806-62354825 None:intergenic 55.0%
GGAGGCCATTGCATATTCCC+AGG + chr2_1:62354836-62354855 None:intergenic 55.0%
AGAGGAAGCTGTTGCGTCAC+TGG - chr2_1:62355192-62355211 Msa0216470:intron 55.0%
TAGTGACGTCTGCTTCGTGG+TGG + chr2_1:62355468-62355487 None:intergenic 55.0%
GGTTTCAGACGTTGTCGGTG+CGG - chr2_1:62355804-62355823 Msa0216470:intron 55.0%
! GAGGAGATCATCTGGCTCGT+GGG + chr2_1:62355887-62355906 None:intergenic 55.0%
! TGAGGAGATCATCTGGCTCG+TGG + chr2_1:62355888-62355907 None:intergenic 55.0%
CGAGCCAGATGATCTCCTCA+TGG - chr2_1:62355888-62355907 Msa0216470:CDS 55.0%
GTAGAACATTGCCGGGAAGC+AGG - chr2_1:62356163-62356182 Msa0216470:CDS 55.0%
GTAGCTGTAGACCTGCTTCC+CGG + chr2_1:62356177-62356196 None:intergenic 55.0%
AGTTGCAAGGCGATCGATGG+TGG + chr2_1:62356550-62356569 None:intergenic 55.0%
GAGTTACTCGGGCAGTTGCA+AGG + chr2_1:62356563-62356582 None:intergenic 55.0%
TGCCCGAGTAACTCAGCAGA+AGG - chr2_1:62356569-62356588 Msa0216470:intron 55.0%
!! AGTGCTGACCAAGGCATCAC+CGG - chr2_1:62356857-62356876 Msa0216470:intron 55.0%
AAGACGAGTCCGTGCGAAGT+TGG + chr2_1:62356938-62356957 None:intergenic 55.0%
ATTGCTTGGTTACTCGGCGG+AGG + chr2_1:62357203-62357222 None:intergenic 55.0%
! ATGCCGAGGGGCGTGTCAAA+AGG - chr2_1:62353601-62353620 Msa0216470:CDS 60.0%
GGGTTGCGAAGACACCTGCA+TGG + chr2_1:62354084-62354103 None:intergenic 60.0%
ATGGAAGGGGCCAAATGCCG+AGG - chr2_1:62354693-62354712 Msa0216470:CDS 60.0%
TCGGCCATGACCTCGGCATT+TGG + chr2_1:62354706-62354725 None:intergenic 60.0%
TCAGAGCGATCCCCGTTTGG+AGG + chr2_1:62354854-62354873 None:intergenic 60.0%
GGCAGTTGCAAGGCGATCGA+TGG + chr2_1:62356553-62356572 None:intergenic 60.0%
GGGGCCAAATGCCGAGGTCA+TGG - chr2_1:62354699-62354718 Msa0216470:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 62351984 62357823 62351984 ID=Msa0216470;Name=Msa0216470
chr2_1 mRNA 62351984 62357823 62351984 ID=Msa0216470-mRNA-1;Parent=Msa0216470;Name=Msa0216470-mRNA-1;_AED=0.11;_eAED=0.11;_QI=379|1|1|1|1|1|8|495|1111
chr2_1 exon 62351984 62353450 62351984 ID=Msa0216470-mRNA-1:exon:17278;Parent=Msa0216470-mRNA-1
chr2_1 exon 62353592 62355153 62353592 ID=Msa0216470-mRNA-1:exon:17277;Parent=Msa0216470-mRNA-1
chr2_1 exon 62355571 62355800 62355571 ID=Msa0216470-mRNA-1:exon:17276;Parent=Msa0216470-mRNA-1
chr2_1 exon 62355888 62356040 62355888 ID=Msa0216470-mRNA-1:exon:17275;Parent=Msa0216470-mRNA-1
chr2_1 exon 62356140 62356218 62356140 ID=Msa0216470-mRNA-1:exon:17274;Parent=Msa0216470-mRNA-1
chr2_1 exon 62356484 62356587 62356484 ID=Msa0216470-mRNA-1:exon:17273;Parent=Msa0216470-mRNA-1
chr2_1 exon 62357132 62357308 62357132 ID=Msa0216470-mRNA-1:exon:17272;Parent=Msa0216470-mRNA-1
chr2_1 exon 62357386 62357823 62357386 ID=Msa0216470-mRNA-1:exon:17271;Parent=Msa0216470-mRNA-1
chr2_1 five_prime_UTR 62357445 62357823 62357445 ID=Msa0216470-mRNA-1:five_prime_utr;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62357386 62357444 62357386 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62357132 62357308 62357132 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62356484 62356587 62356484 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62356140 62356218 62356140 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62355888 62356040 62355888 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62355571 62355800 62355571 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62353592 62355153 62353592 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 CDS 62352479 62353450 62352479 ID=Msa0216470-mRNA-1:cds;Parent=Msa0216470-mRNA-1
chr2_1 three_prime_UTR 62351984 62352478 62351984 ID=Msa0216470-mRNA-1:three_prime_utr;Parent=Msa0216470-mRNA-1
Gene Sequence

>Msa0216470

ATGGATCCAAGTTCTTATCTTGATCATGCTCTTTTTCAACTCACCCCAACAAGAACAAGATGTGACTTGATGATTGTTGCTGGTGGTGTTAATGAAAGACTAGCTTCTGGGCTGTTAGAACCGTTTGTTTCTCACCTTAAATGTGCAAAAGATCAGATTTCAAAAGGTGGCTATTCCATCACTCTATGTCCTGAATCTACATATGCTCCATGGTTCACCAAAGCCACCTTGCAAAGGTTTGTTAGATTTGTGAGCACTCCAGAAGTTATAGAGAGGTTTGTGACCATAGAAAAGGAGATTGTGCAGATTGAAGGTTCAAGTCAATCAAATGAAGCAGAAGGAAATGTGTCATATGCCGAGGGGCGTGTCAAAAGGTCAACTATTTCCTCCAATCAAGATGGAAATGAAGAGAACTCGAGGGTTCGCCTTCAACGTGTTCTAGACAATCGTAAAGCTATGCTTTGCAAAGAACAAGCAATGGCCTACGCCCGTGCTTTAGTTGCTGGATTTTATCCAGAATCCATGGATGATCTTATTTGTTTCGCTGACGCTTTTGGAGCTTCACGTTTAAGGGAAGCATGCTTAAATTTCTTAGAGCTATGCAAACAAAAGAATGAAGACAAGCTGTGGATGGATGAGATTGCAGCCATGCAGGTGTCTTCGCAACCCGTATTGCCTTACTTAAGGACATCTGGAATCATACTTGCAGGTGAAGATGACTCGGGAAGTAAAATAAATGGCACGGGTGATGCCTCAGTTTCTGATTCAACTCCAAGCCATGCAAGTTTCGACATTGGCCAAGATTATAGCTTGCCAGCATCAGTTCAAACACCATCATCTGATGGAAGGGGCCAAATGCCGAGGTCATGGCCGAACCATCATCCACAGTACATTCACAATTTTCAGGGTCATGCATTTCAACAAACGCCTCCATACCAAGGATACATGTATCCTGGTATGCAGGTTCCGTCTTCCTATTATCCTGGGAATATGCAATGGCCTCCAAACGGGGATCGCTCTGAAATGGATTCTCATAAGAAAAAGAAGAAGAAAAACAAGAAATCTCAGGTATTGGATCACTCTGAAGAAGATGAGTCAACTGCATCGTCTGATTCTACTTATGAGAGTGATTCAGATGACAATTCAAAGCAAAGCAAAAAGAACTCTTCAACGGAGCGTCTTCGCAACAAGAAGCATGGAAAGAAGTCGTCAAGGAAAGTAGTTATCCGTAATATAAACTATATAACATCCAATGGAGACGGAGAAAAGGGTAGTATCACTGAAGGGAGTTTGTCGAATGAGGAAGAATTTATCAATGGAAATTCCTTGAAACACAAGGTAGAGGAAGCTGTTGCGTCACTGGAGAAAAGAAACAAGTCAACCTCTCGTCAGCATAAGAAACAACATAGCGAAAAGCACCATGACATGCTAAATGGTTCAAGGAATGCTGATTCCAACGGGCAAAAAGGTAATAACAACTGGGATGCTTTCCAGAATCTTCTTTTGAGAGACGATGATGATTCTACTCATGATATAGGAAAACAGCCAATGAAATTTCAGGAAGAATATGCTATGAGCAAGAAGTTTGAGAATGGAAGGTCAAATGAGTTTAACCACCACGAAGCAGACGTCACTAAAACTCGAGTAGTTTCAAATGATTCCTTTATTGTGGCAGAGAGGGAATTGGACAGTAAGGGTCGAGATCGTGTTGAATATTTCAACGAAGGGAAGGATGGATCTACATTCATGCAGACAAAGAAAATTACCAGCGAGGAATTGTTGTTATCTCAGAGAAATGATGAATCGGGTAGCTATTATGTGTCATCTTCAGCTAGAGATTATTTACCTGTAGAGAAAAACAAGAAAGGCATTTTAGCTGACGACTCTTTCATGATTCAAGCTCGACCATTGGAACATCAATTTAATTCTCAAACAGCTTCTGATATCAGTTTGGTTTCAGACGTTGTCGGTGCGGCTGAATTCACAAACGGTACACAAGAAGGTTCACACAAGAAGACTGATGCCTTAATTTCCCACGAGCCAGATGATCTCCTCATGGTTCTCGATCGTGATTCAGCTGTACAGCAGAATGCAGCACCTTGGAGAATGGAAATGGATAATGAAAACAACATCTCTCTATACGAAGCTAACAAAAAGATTTCGGACGCTAAAACCGAAAGAAATCTTGTATCTAATCATGAAGGCGCCGATAAGAAAAATACTGGAGCGAAATCTGGGAAAATTTCAAGTAAAGAGGCAAAATCGAAGACTCCAAATGCATCTAAAACCAAATCTGATGTCATGTCAAGAAGTAGAACATTGCCGGGAAGCAGGTCTACAGCTACGAAGAGCAAATCGGAAAAGGAAGAAGAAAATAGAAAGAGAAGAGAAGAGTTAATGTTGCAGCGGCAGAAAAGAATTGCCGAAAGAAGTGCCTTGAAGAAGACTGGAACAGAAACTAAGACTTCTTTGACTTCAGCAAGGAAAGGGAATCCTAAGATTCATCCATCTAATGGAGAGACTAAGAAACTGAACAAACCAGTCCTTAGGAGTTCCACCATCGATCGCCTTGCAACTGCCCGAGTAACTCAGCAGAAGGTTTCACCTAATCAAGCAAATTCAGGTCCAACCAAGAAGCCTTCCTTGAAGGCAAATAAGGTACCTTTACTGAAGAAACAGCTCCAAAAAGAAGTGAAATCTTCAAATCATAAAGAAGATGTGCATAAAACAAAAGGGAAAGTTCTTTCCAAGAGTAGCGCAAAGACTAAGAATGAAATCAAGGCTTCGGTAGTATTGCCTGTCAAACCTGATGCCACAAAAGCAGTTGAACAAAACAACAACAATCATGGTTTGAAAGACATTGGAGTGCTGACCAAGGCATCACCGGAGAAACATTCAAGATATTTGACTTCAGACAGAGAAATCTTACATGAAAATATCAGCCAACTTCGCACGGACTCGTCTTTGTCAAGTCATGATCATGCATTGAGAGGAAATCAGTCTAGAAATGAAGTAGTATCAGACAAGTTATCTTCACTTCATGGCGATAATAATCAACCTCGACATAATAATGACATGATCACAACTTCTACAGCTGCATTACCTAACAAACCATTAATACATACTGCTGTGAATTCAAAGGTGAATCAGGAAATAGAAGAAAGTAATGCTACTACACCTAAAGTCTCAGAGATTCAAATCTCTACTCCTCCGCCGAGTAACCAAGCAATGCAAGAATCAATCCACAACAGGAAGAAATGGATAAATGATGAGGCGGACTCTTCAAAAGTAGCGAAAGGATTCCGTAAGCTTATCTTCTTTGGAAGAAGGAGCTGA
Protein sequence

>Msa0216470

MDPSSYLDHALFQLTPTRTRCDLMIVAGGVNERLASGLLEPFVSHLKCAKDQISKGGYSITLCPESTYAPWFTKATLQRFVRFVSTPEVIERFVTIEKEIVQIEGSSQSNEAEGNVSYAEGRVKRSTISSNQDGNEENSRVRLQRVLDNRKAMLCKEQAMAYARALVAGFYPESMDDLICFADAFGASRLREACLNFLELCKQKNEDKLWMDEIAAMQVSSQPVLPYLRTSGIILAGEDDSGSKINGTGDASVSDSTPSHASFDIGQDYSLPASVQTPSSDGRGQMPRSWPNHHPQYIHNFQGHAFQQTPPYQGYMYPGMQVPSSYYPGNMQWPPNGDRSEMDSHKKKKKKNKKSQVLDHSEEDESTASSDSTYESDSDDNSKQSKKNSSTERLRNKKHGKKSSRKVVIRNINYITSNGDGEKGSITEGSLSNEEEFINGNSLKHKVEEAVASLEKRNKSTSRQHKKQHSEKHHDMLNGSRNADSNGQKGNNNWDAFQNLLLRDDDDSTHDIGKQPMKFQEEYAMSKKFENGRSNEFNHHEADVTKTRVVSNDSFIVAERELDSKGRDRVEYFNEGKDGSTFMQTKKITSEELLLSQRNDESGSYYVSSSARDYLPVEKNKKGILADDSFMIQARPLEHQFNSQTASDISLVSDVVGAAEFTNGTQEGSHKKTDALISHEPDDLLMVLDRDSAVQQNAAPWRMEMDNENNISLYEANKKISDAKTERNLVSNHEGADKKNTGAKSGKISSKEAKSKTPNASKTKSDVMSRSRTLPGSRSTATKSKSEKEEENRKRREELMLQRQKRIAERSALKKTGTETKTSLTSARKGNPKIHPSNGETKKLNKPVLRSSTIDRLATARVTQQKVSPNQANSGPTKKPSLKANKVPLLKKQLQKEVKSSNHKEDVHKTKGKVLSKSSAKTKNEIKASVVLPVKPDATKAVEQNNNNHGLKDIGVLTKASPEKHSRYLTSDREILHENISQLRTDSSLSSHDHALRGNQSRNEVVSDKLSSLHGDNNQPRHNNDMITTSTAALPNKPLIHTAVNSKVNQEIEESNATTPKVSEIQISTPPPSNQAMQESIHNRKKWINDEADSSKVAKGFRKLIFFGRRS*