Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295790 | XP_013464747.1 | 91.950 | 1118 | 60 | 4 | 1 | 1111 | 1 | 1095 | 0.0 | 2063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295790 | sp|O80386|CIP7_ARATH | 38.926 | 1192 | 511 | 35 | 1 | 1110 | 1 | 1057 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295790 | A0A072VAF6 | 91.950 | 1118 | 60 | 4 | 1 | 1111 | 1 | 1095 | 0.0 | 2063 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0216470 | Msa0295790 | 0.871026 | 9.346979e-67 | -8.615850e-47 |
| Msa0216520 | Msa0295790 | 0.878489 | 2.694474e-69 | -8.615850e-47 |
| Msa0295790 | Msa0334220 | 0.889191 | 3.021508e-73 | -8.615850e-47 |
| Msa0295790 | Msa0810480 | 0.803885 | 2.816203e-49 | -8.615850e-47 |
| Msa0295790 | Msa0944030 | 0.802457 | 5.560499e-49 | -8.615850e-47 |
| Msa0295790 | Msa1321330 | 0.812669 | 3.774769e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295790 | MtrunA17_Chr2g0318031 | 91.950 | 1118 | 60 | 4 | 1 | 1111 | 1 | 1095 | 0.0 | 2063 |
| Msa0295790 | MtrunA17_Chr2g0281781 | 36.018 | 894 | 453 | 26 | 1 | 817 | 1 | 852 | 3.99e-138 | 439 |
| Msa0295790 | MtrunA17_Chr1g0187491 | 31.650 | 891 | 441 | 39 | 1 | 812 | 1 | 802 | 1.45e-72 | 264 |
| Msa0295790 | MtrunA17_Chr1g0166471 | 32.578 | 574 | 269 | 21 | 1 | 527 | 1 | 503 | 3.90e-62 | 231 |
| Msa0295790 | MtrunA17_Chr8g0344661 | 33.636 | 220 | 131 | 3 | 1 | 213 | 1 | 212 | 1.51e-30 | 130 |
| Msa0295790 | MtrunA17_Chr3g0128441 | 31.863 | 204 | 123 | 5 | 7 | 207 | 11 | 201 | 6.24e-19 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295790 | AT4G27430.1 | 38.926 | 1192 | 511 | 35 | 1 | 1110 | 1 | 1057 | 0.0 | 609 |
| Msa0295790 | AT4G27430.2 | 38.926 | 1192 | 511 | 35 | 1 | 1110 | 1 | 1057 | 0.0 | 609 |
| Msa0295790 | AT1G61100.2 | 37.016 | 878 | 394 | 33 | 1 | 813 | 1 | 784 | 2.11e-128 | 412 |
| Msa0295790 | AT1G61100.1 | 37.088 | 879 | 393 | 34 | 1 | 813 | 1 | 785 | 3.15e-128 | 411 |
| Msa0295790 | AT5G43310.5 | 31.178 | 866 | 396 | 30 | 1 | 811 | 1 | 721 | 7.35e-75 | 269 |
| Msa0295790 | AT5G43310.4 | 31.646 | 869 | 388 | 32 | 1 | 811 | 1 | 721 | 1.44e-74 | 270 |
| Msa0295790 | AT5G43310.3 | 31.646 | 869 | 388 | 32 | 1 | 811 | 1 | 721 | 1.44e-74 | 270 |
| Msa0295790 | AT5G43310.2 | 31.646 | 869 | 388 | 32 | 1 | 811 | 1 | 721 | 1.60e-74 | 270 |
| Msa0295790 | AT3G14172.1 | 42.180 | 211 | 109 | 4 | 1 | 206 | 1 | 203 | 7.08e-41 | 164 |
| Msa0295790 | AT5G43310.1 | 63.810 | 105 | 37 | 1 | 1 | 104 | 1 | 105 | 9.30e-37 | 151 |
| Msa0295790 | AT5G43310.1 | 28.165 | 703 | 335 | 28 | 134 | 811 | 221 | 778 | 1.94e-31 | 134 |
| Msa0295790 | AT3G14172.2 | 39.336 | 211 | 107 | 5 | 1 | 206 | 1 | 195 | 1.40e-34 | 144 |
| Msa0295790 | AT1G17360.1 | 35.266 | 207 | 113 | 3 | 1 | 204 | 1 | 189 | 1.32e-31 | 134 |
| Msa0295790 | AT1G72410.1 | 30.882 | 204 | 133 | 1 | 1 | 204 | 1 | 196 | 3.48e-26 | 117 |
| Msa0295790 | AT1G72410.2 | 30.882 | 204 | 133 | 1 | 1 | 204 | 1 | 196 | 4.40e-26 | 117 |
| Msa0295790 | AT3G14172.3 | 38.272 | 162 | 87 | 4 | 50 | 206 | 12 | 165 | 1.65e-21 | 102 |
Find 247 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGCTCTCAAACTTTAA+AGG | 0.152951 | 2_3:+48506776 | None:intergenic |
| AGACATATACACATGTATTT+TGG | 0.197619 | 2_3:+48506963 | None:intergenic |
| TTCCGTAAGCTTATCTTCTT+TGG | 0.222118 | 2_3:-48501821 | Msa0295790:CDS |
| ATTTGTTTCGCTGACGCTTT+TGG | 0.238140 | 2_3:-48505229 | Msa0295790:CDS |
| TTCACAGCAGTATGTATTAA+TGG | 0.239397 | 2_3:+48502010 | None:intergenic |
| CCATTAGATGGATGAATCTT+AGG | 0.239929 | 2_3:+48502628 | None:intergenic |
| AAAACAGCCAATGAAATTTC+AGG | 0.242138 | 2_3:-48503724 | Msa0295790:CDS |
| ACCCAACACATTCTTAGATT+TGG | 0.267760 | 2_3:-48507049 | Msa0295790:five_prime_UTR |
| TGCCTTCAAGGAAGGCTTCT+TGG | 0.271743 | 2_3:+48502492 | None:intergenic |
| GCCTTCCTTGAAGGCAAATA+AGG | 0.273580 | 2_3:-48502485 | Msa0295790:CDS |
| ATCTGGCTCGTGGGAAATTA+AGG | 0.277127 | 2_3:+48503239 | None:intergenic |
| TACGCCCGTGCTTTAGTTGC+TGG | 0.279322 | 2_3:-48505280 | Msa0295790:CDS |
| TTCTTAGTCTCTCCATTAGA+TGG | 0.291797 | 2_3:+48502616 | None:intergenic |
| ATTTGAATCTCTGAGACTTT+AGG | 0.296960 | 2_3:+48501944 | None:intergenic |
| CTTCTTCAAGGCACTTCTTT+CGG | 0.299554 | 2_3:+48502699 | None:intergenic |
| TGAATTGAATTGAATTGAAT+TGG | 0.306587 | 2_3:-48507013 | Msa0295790:five_prime_UTR |
| AAATATCTTGAATGTTTATC+TGG | 0.309828 | 2_3:+48502238 | None:intergenic |
| CTCTTCATTTCCATCTTGAT+TGG | 0.310670 | 2_3:+48505474 | None:intergenic |
| TATAGATTGTAGATGAAGTT+TGG | 0.313339 | 2_3:-48506806 | Msa0295790:five_prime_UTR |
| CGTCTCTCAAAAGAAGATTC+TGG | 0.317168 | 2_3:+48503772 | None:intergenic |
| TCCAATGGAGACGGAGAAAA+AGG | 0.317324 | 2_3:-48504014 | Msa0295790:CDS |
| TTGCATATTCCCAGGATAAT+AGG | 0.319408 | 2_3:+48504289 | None:intergenic |
| TCGGCCATGACCTCGGCATT+TGG | 0.324562 | 2_3:+48504411 | None:intergenic |
| TCACCTAATCAAGCAAATTC+AGG | 0.324869 | 2_3:-48502520 | Msa0295790:CDS |
| ATAAGATCATCCATGGATTC+TGG | 0.325372 | 2_3:+48505250 | None:intergenic |
| TTCTGTTCCAGTCTTCTTCA+AGG | 0.325703 | 2_3:+48502687 | None:intergenic |
| AGTTAACAAGAACGTGAAAA+TGG | 0.327689 | 2_3:-48507085 | Msa0295790:five_prime_UTR |
| TTCCCTCTCTGCCACAATAA+AGG | 0.329132 | 2_3:+48503602 | None:intergenic |
| CACATTATGTTCTGTTGGAT+TGG | 0.330308 | 2_3:-48506902 | Msa0295790:five_prime_UTR |
| TCTATTTCCTGATTCACCTT+TGG | 0.331980 | 2_3:+48501986 | None:intergenic |
| AAAAGAACCTTGTTCTTGTT+GGG | 0.335784 | 2_3:+48506689 | None:intergenic |
| TTCCTCTACCTTGTGTTTCA+AGG | 0.346357 | 2_3:+48503938 | None:intergenic |
| AAACCTTTGCAAGGTGGCTT+TGG | 0.347703 | 2_3:+48506435 | None:intergenic |
| GCTGATTCCAACGGGCAAAA+AGG | 0.348123 | 2_3:-48503816 | Msa0295790:CDS |
| CTTCGTCTTTGTGCCACTCT+TGG | 0.348842 | 2_3:+48502375 | None:intergenic |
| GTATGTATTAATGGTTTGTT+AGG | 0.350436 | 2_3:+48502019 | None:intergenic |
| TCTTGACATGACATCAGATT+TGG | 0.351205 | 2_3:+48502975 | None:intergenic |
| AAGCACCATGACATGCTAAA+TGG | 0.353658 | 2_3:-48503849 | Msa0295790:CDS |
| TATTCTTCCTGAAATTTCAT+TGG | 0.354187 | 2_3:+48503717 | None:intergenic |
| TCTTGCATTGCTTGGTTACT+CGG | 0.358323 | 2_3:+48501908 | None:intergenic |
| GACTCGGGAAGTAAAATAAA+TGG | 0.359638 | 2_3:-48504958 | Msa0295790:CDS |
| CCTAAGATTCATCCATCTAA+TGG | 0.363387 | 2_3:-48502628 | Msa0295790:CDS |
| GATGATTCTACTCATGATAT+AGG | 0.370285 | 2_3:-48503747 | Msa0295790:CDS |
| ATGCTATATAGTTTATATTA+CGG | 0.374812 | 2_3:+48504036 | None:intergenic |
| GTTCCGTCTTCCTATTATCC+TGG | 0.375217 | 2_3:-48504299 | Msa0295790:CDS |
| ATTAGATACAAGATTTCTTT+CGG | 0.377858 | 2_3:+48503089 | None:intergenic |
| TAAAAGAACCTTGTTCTTGT+TGG | 0.382023 | 2_3:+48506688 | None:intergenic |
| AACAGCTTCTGATATCAGTT+TGG | 0.382114 | 2_3:-48503331 | Msa0295790:CDS |
| ACATCTGGAATCATACTTGC+AGG | 0.382829 | 2_3:-48504988 | Msa0295790:CDS |
| GGACCTGAATTTGCTTGATT+AGG | 0.392454 | 2_3:+48502517 | None:intergenic |
| TCAACAGCTTCTGTTGCATC+AGG | 0.393983 | 2_3:+48502316 | None:intergenic |
| TTGCCTTACTTAAGGACATC+TGG | 0.394849 | 2_3:-48505003 | Msa0295790:CDS |
| CAATCCACAACAGGAAGAAA+TGG | 0.395001 | 2_3:-48501883 | Msa0295790:CDS |
| AACCCGTATTGCCTTACTTA+AGG | 0.395294 | 2_3:-48505011 | Msa0295790:CDS |
| GTCAAGAAGTAGAACATTGC+CGG | 0.397855 | 2_3:-48502959 | Msa0295790:CDS |
| AAACAAGAAATCTCAGGTAT+TGG | 0.398657 | 2_3:-48504210 | Msa0295790:CDS |
| TGTGAATCCAAAGGTGAATC+AGG | 0.407221 | 2_3:-48501993 | Msa0295790:CDS |
| AAACGGGGATCGCTCTGAAA+TGG | 0.412282 | 2_3:-48504258 | Msa0295790:CDS |
| AGAGGAAGCTGTTGCGTCAC+TGG | 0.413854 | 2_3:-48503922 | Msa0295790:CDS |
| AGGTACCTTATTTGCCTTCA+AGG | 0.415479 | 2_3:+48502480 | None:intergenic |
| AACCAAGAAGCCTTCCTTGA+AGG | 0.415998 | 2_3:-48502494 | Msa0295790:CDS |
| GAAGATGCACATAAAACAAA+AGG | 0.418363 | 2_3:-48502409 | Msa0295790:CDS |
| CATGGAGCATATGTAGATTC+AGG | 0.421322 | 2_3:+48506463 | None:intergenic |
| AGTCAATCAAATGAAGTAGA+AGG | 0.423120 | 2_3:-48505808 | Msa0295790:intron |
| GAAATCTTACATGAAAATAT+CGG | 0.423878 | 2_3:-48502202 | Msa0295790:CDS |
| TATTGTGGCAGAGAGGGAAT+TGG | 0.425986 | 2_3:-48503598 | Msa0295790:CDS |
| TTCAAGGAAGGCTTCTTGGT+TGG | 0.426938 | 2_3:+48502496 | None:intergenic |
| ACTAACACATTATGTTCTGT+TGG | 0.430919 | 2_3:-48506907 | Msa0295790:five_prime_UTR |
| ATCTCAGAGAAATGATGAAT+CGG | 0.432098 | 2_3:-48503478 | Msa0295790:CDS |
| CTTTGACTTCAGCAAGGAAA+GGG | 0.432104 | 2_3:-48502654 | Msa0295790:CDS |
| TTATCCATTTCTTCCTGTTG+TGG | 0.432151 | 2_3:+48501879 | None:intergenic |
| AACCTAAAGCAAAACTCTCT+TGG | 0.434391 | 2_3:-48507114 | Msa0295790:five_prime_UTR |
| GTTAATGAAAGACTAGCTTC+TGG | 0.438563 | 2_3:-48506565 | Msa0295790:CDS |
| TGTGACTTGATGATTGTTGC+TGG | 0.439597 | 2_3:-48506592 | Msa0295790:CDS |
| AGCTTATCTTCTTTGGAAGA+AGG | 0.440902 | 2_3:-48501814 | Msa0295790:CDS |
| ATATGCAATGGCCTCCAAAC+GGG | 0.441469 | 2_3:-48504274 | Msa0295790:CDS |
| AAGGAGATTGTGCAGATTGA+AGG | 0.443294 | 2_3:-48505835 | Msa0295790:CDS |
| ATTTCAGAGCGATCCCCGTT+TGG | 0.446504 | 2_3:+48504260 | None:intergenic |
| TTCATTTCCATCTTGATTGG+AGG | 0.446898 | 2_3:+48505477 | None:intergenic |
| GTAGCTGTAGACCTGCTTCC+CGG | 0.454447 | 2_3:+48502940 | None:intergenic |
| AAGGAGCTGAAGAACCTTTG+TGG | 0.456794 | 2_3:-48501795 | Msa0295790:exon |
| CATGATTCAAGCTCGACCAT+TGG | 0.463014 | 2_3:-48503373 | Msa0295790:CDS |
| TCTGTTGCATCAGGTTTGAC+AGG | 0.466892 | 2_3:+48502325 | None:intergenic |
| TCCAAATCTAAGAATGTGTT+GGG | 0.471893 | 2_3:+48507048 | None:intergenic |
| ATGCCGAGGGGCGTGTCAAA+AGG | 0.472016 | 2_3:-48505510 | Msa0295790:CDS |
| TGCAAGAATCAATCCACAAC+AGG | 0.472379 | 2_3:-48501892 | Msa0295790:CDS |
| ATTCCAGATGTCCTTAAGTA+AGG | 0.474368 | 2_3:+48505000 | None:intergenic |
| GGATTGATTCTTGCATTGCT+TGG | 0.475211 | 2_3:+48501900 | None:intergenic |
| AGAGAGGGAATTGGACAGTA+AGG | 0.477932 | 2_3:-48503589 | Msa0295790:CDS |
| GGGGCCAAATGCCGAGGTCA+TGG | 0.478199 | 2_3:-48504415 | Msa0295790:CDS |
| TGGAGCTGTTTCTTCTGCAA+AGG | 0.480417 | 2_3:+48502460 | None:intergenic |
| ACAAACCTCTCTATAACTTC+TGG | 0.480450 | 2_3:+48505868 | None:intergenic |
| AAACCTTCTGCTGAGTTACT+CGG | 0.483075 | 2_3:+48502542 | None:intergenic |
| TACCAGGATACATGTATCCT+TGG | 0.483817 | 2_3:+48504327 | None:intergenic |
| GATTGTCTAGAACACGTTGA+AGG | 0.488204 | 2_3:+48505338 | None:intergenic |
| TGTCCTTAAGTAAGGCAATA+CGG | 0.488371 | 2_3:+48505008 | None:intergenic |
| GAGGTTTGTGACCATAGAAA+AGG | 0.488541 | 2_3:-48505854 | Msa0295790:CDS |
| GTAGAACATTGCCGGGAAGC+AGG | 0.488759 | 2_3:-48502951 | Msa0295790:CDS |
| AAAATACTGGAGCGAAATCT+GGG | 0.489271 | 2_3:-48503047 | Msa0295790:CDS |
| CAAGGAATGCTGATTCCAAC+GGG | 0.490459 | 2_3:-48503824 | Msa0295790:CDS |
| TTCCGTCTTCCTATTATCCT+GGG | 0.490463 | 2_3:-48504298 | Msa0295790:CDS |
| AGAACCATGAGGAGATCATC+TGG | 0.490562 | 2_3:+48503222 | None:intergenic |
| GTCCTTAAGTAAGGCAATAC+GGG | 0.490751 | 2_3:+48505009 | None:intergenic |
| TTCCAAAGAAGATAAGCTTA+CGG | 0.490831 | 2_3:+48501819 | None:intergenic |
| ATCCAAATCTAAGAATGTGT+TGG | 0.495526 | 2_3:+48507047 | None:intergenic |
| AGAAGTGCCTTGAAGAAGAC+TGG | 0.497341 | 2_3:-48502694 | Msa0295790:CDS |
| GCAAAAGATCAGATTTCAAA+AGG | 0.497438 | 2_3:-48506508 | Msa0295790:CDS |
| TACGAAGAGCAAATCGGAAA+AGG | 0.497817 | 2_3:-48502920 | Msa0295790:intron |
| TGGCCCCTTCCATCAGATGA+TGG | 0.498715 | 2_3:+48504431 | None:intergenic |
| GAATGCAGCACCTTGGAGAA+TGG | 0.498807 | 2_3:-48503175 | Msa0295790:CDS |
| AGAATGTGTTGGGTGTGGTT+AGG | 0.499088 | 2_3:+48507058 | None:intergenic |
| ACCTTATTTGCCTTCAAGGA+AGG | 0.500268 | 2_3:+48502484 | None:intergenic |
| TGGGAAAATTTCAAGTAAAG+AGG | 0.504134 | 2_3:-48503028 | Msa0295790:CDS |
| GGAGGCCATTGCATATTCCC+AGG | 0.511743 | 2_3:+48504281 | None:intergenic |
| GGGAAAATTCTTTCCAAGAG+TGG | 0.512630 | 2_3:-48502388 | Msa0295790:CDS |
| TTCAAATGATTCCTTTATTG+TGG | 0.513484 | 2_3:-48503613 | Msa0295790:CDS |
| AGCACCTTGGAGAATGGAAA+TGG | 0.515394 | 2_3:-48503169 | Msa0295790:CDS |
| GGCAGTTGCAAGGCGATCGA+TGG | 0.516940 | 2_3:+48502564 | None:intergenic |
| ATGACATGCTAAATGGTTCA+AGG | 0.520262 | 2_3:-48503842 | Msa0295790:CDS |
| AACTGAACAAACCAGTCCTT+AGG | 0.520450 | 2_3:-48502594 | Msa0295790:CDS |
| ATGTCGAAACTTGCATGGCT+TGG | 0.522390 | 2_3:+48504904 | None:intergenic |
| AATATGCAATGGCCTCCAAA+CGG | 0.523303 | 2_3:-48504275 | Msa0295790:CDS |
| GAACAAAGCAACAACAATCA+TGG | 0.523460 | 2_3:-48502295 | Msa0295790:CDS |
| TTAATGAAAGACTAGCTTCT+GGG | 0.524068 | 2_3:-48506564 | Msa0295790:CDS |
| ATGTACTGTGGATGATGGTT+CGG | 0.526195 | 2_3:+48504392 | None:intergenic |
| TTCCTTTATTGTGGCAGAGA+GGG | 0.526445 | 2_3:-48503604 | Msa0295790:CDS |
| ATGAGCAAGAAGTTTGAGAA+TGG | 0.527708 | 2_3:-48503690 | Msa0295790:CDS |
| TTCACAAACGGTACACAAGA+AGG | 0.529595 | 2_3:-48503282 | Msa0295790:CDS |
| TCTTTGACTTCAGCAAGGAA+AGG | 0.531447 | 2_3:-48502655 | Msa0295790:CDS |
| TTGAACCATTTAGCATGTCA+TGG | 0.531723 | 2_3:+48503844 | None:intergenic |
| GGATACATGTATCCTTGGTA+TGG | 0.531774 | 2_3:+48504332 | None:intergenic |
| GATCGATGGTGGAACTCCTA+AGG | 0.533024 | 2_3:+48502578 | None:intergenic |
| CAATACTCTAACTCTAGCTA+TGG | 0.534070 | 2_3:-48506752 | Msa0295790:exon |
| AATGAGGAAGAATTTATCAA+TGG | 0.535620 | 2_3:-48503966 | Msa0295790:CDS |
| GAAGACGGAACCTGCATACC+AGG | 0.538054 | 2_3:+48504311 | None:intergenic |
| TCTCAGAGAAATGATGAATC+GGG | 0.538579 | 2_3:-48503477 | Msa0295790:CDS |
| TGAAGGGAGTTTGTCGAATG+AGG | 0.539941 | 2_3:-48503982 | Msa0295790:CDS |
| AAGACGAGTCCGTGCGAAGT+TGG | 0.541035 | 2_3:+48502179 | None:intergenic |
| TACCAAGGATACATGTATCC+TGG | 0.541094 | 2_3:-48504329 | Msa0295790:CDS |
| TGTCAGTATTATGTCGAGGT+TGG | 0.542114 | 2_3:+48502068 | None:intergenic |
| ACTATTTCCTCCAATCAAGA+TGG | 0.542190 | 2_3:-48505484 | Msa0295790:CDS |
| ATACATGTATCCTGGTATGC+AGG | 0.542557 | 2_3:-48504321 | Msa0295790:CDS |
| AACACCATCATCTGATGGAA+GGG | 0.544199 | 2_3:-48504435 | Msa0295790:CDS |
| GGCCAATGTCGAAACTTGCA+TGG | 0.544950 | 2_3:+48504899 | None:intergenic |
| AATTGAATACATAAAGAAAG+AGG | 0.545375 | 2_3:+48506848 | None:intergenic |
| TACAGCTACGAAGAGCAAAT+CGG | 0.545547 | 2_3:-48502926 | Msa0295790:CDS |
| TCAGAGCGATCCCCGTTTGG+AGG | 0.546490 | 2_3:+48504263 | None:intergenic |
| TTCCTTGAAACACAAGGTAG+AGG | 0.550703 | 2_3:-48503940 | Msa0295790:CDS |
| GGATGAGATTGCAGCCATGC+AGG | 0.550747 | 2_3:-48505043 | Msa0295790:CDS |
| AAAGAACCTTGTTCTTGTTG+GGG | 0.551905 | 2_3:+48506690 | None:intergenic |
| ATGTTTATCTGGCGATGCCT+TGG | 0.551970 | 2_3:+48502249 | None:intergenic |
| GCATGATCAAGATAAGAACT+TGG | 0.553572 | 2_3:+48506727 | None:intergenic |
| TCAAGAAGTAGAACATTGCC+GGG | 0.554753 | 2_3:-48502958 | Msa0295790:CDS |
| AACCTTCTGCTGAGTTACTC+GGG | 0.555699 | 2_3:+48502543 | None:intergenic |
| AAGATGCACATAAAACAAAA+GGG | 0.556429 | 2_3:-48502408 | Msa0295790:CDS |
| TACAGCAGAATGCAGCACCT+TGG | 0.558825 | 2_3:-48503182 | Msa0295790:CDS |
| GTTCAAACACCATCATCTGA+TGG | 0.561192 | 2_3:-48504440 | Msa0295790:CDS |
| GCAAGTTTCGACATTGGCCA+AGG | 0.562257 | 2_3:-48504895 | Msa0295790:intron |
| GAATGAAGACAAGCTGTGGA+TGG | 0.564189 | 2_3:-48505064 | Msa0295790:CDS |
| AGTTTGGTTTCAGACGTTGT+CGG | 0.566700 | 2_3:-48503315 | Msa0295790:CDS |
| AAATATCGGCCAACTTCGCA+CGG | 0.567617 | 2_3:-48502188 | Msa0295790:CDS |
| TGATGGTTCGGCCATGACCT+CGG | 0.567836 | 2_3:+48504404 | None:intergenic |
| GAGTTACTCGGGCAGTTGCA+AGG | 0.567913 | 2_3:+48502554 | None:intergenic |
| TCAAGGAATGCTGATTCCAA+CGG | 0.568811 | 2_3:-48503825 | Msa0295790:CDS |
| AGCCATGCAAGTTTCGACAT+TGG | 0.568946 | 2_3:-48504901 | Msa0295790:CDS |
| ATTGCTTGGTTACTCGGCGG+AGG | 0.570118 | 2_3:+48501914 | None:intergenic |
| AGATAACAACAATTCCTCGC+TGG | 0.570326 | 2_3:+48503497 | None:intergenic |
| AATCTTGTATCTAATCATGA+AGG | 0.570547 | 2_3:-48503081 | Msa0295790:CDS |
| CGTGTTGAATATTTCAACGA+AGG | 0.570645 | 2_3:-48503558 | Msa0295790:CDS |
| TATTTCAACGAAGGGAAGGA+TGG | 0.570660 | 2_3:-48503549 | Msa0295790:CDS |
| AAACACCATCATCTGATGGA+AGG | 0.571552 | 2_3:-48504436 | Msa0295790:CDS |
| CATTTAAGGTGAGAAACAAA+CGG | 0.571866 | 2_3:+48506532 | None:intergenic |
| AAATCCAGCAACTAAAGCAC+GGG | 0.574101 | 2_3:+48505276 | None:intergenic |
| GATGGTGTTTGAACTGATGC+TGG | 0.577297 | 2_3:+48504449 | None:intergenic |
| CGTCTTCGCAACAAGAAGCA+TGG | 0.577721 | 2_3:-48504086 | Msa0295790:CDS |
| TTATCCATTTCCATTCTCCA+AGG | 0.577841 | 2_3:+48503165 | None:intergenic |
| ACTTGCAGGTGAAGATGACT+CGG | 0.578585 | 2_3:-48504974 | Msa0295790:CDS |
| CTGAATCTACATATGCTCCA+TGG | 0.579695 | 2_3:-48506462 | Msa0295790:CDS |
| GGGAAGTAAAATAAATGGCA+CGG | 0.579736 | 2_3:-48504953 | Msa0295790:CDS |
| GAAACAAATAAGATCATCCA+TGG | 0.580905 | 2_3:+48505243 | None:intergenic |
| GGAAGTAAAATAAATGGCAC+GGG | 0.582458 | 2_3:-48504952 | Msa0295790:CDS |
| TCACCAAAGCCACCTTGCAA+AGG | 0.584782 | 2_3:-48506438 | Msa0295790:intron |
| GAATTAAATTGATATTCCAA+TGG | 0.585629 | 2_3:+48503357 | None:intergenic |
| ATAAACTATATAGCATCCAA+TGG | 0.585733 | 2_3:-48504029 | Msa0295790:CDS |
| TACATGTATCCTTGGTATGG+AGG | 0.585915 | 2_3:+48504335 | None:intergenic |
| TGAATATTTCAACGAAGGGA+AGG | 0.586689 | 2_3:-48503553 | Msa0295790:CDS |
| AAAAGAATGAAGACAAGCTG+TGG | 0.587370 | 2_3:-48505068 | Msa0295790:CDS |
| ATGTGTTGGGTGTGGTTAGG+AGG | 0.588238 | 2_3:+48507061 | None:intergenic |
| GCAAGAAGTTTGAGAATGGA+AGG | 0.588781 | 2_3:-48503686 | Msa0295790:CDS |
| GACTCTTCAAAAGTAGCGAA+AGG | 0.590628 | 2_3:-48501845 | Msa0295790:CDS |
| GTGTTGAATATTTCAACGAA+GGG | 0.597338 | 2_3:-48503557 | Msa0295790:CDS |
| ATGGTGGAACTCCTAAGGAC+TGG | 0.598531 | 2_3:+48502583 | None:intergenic |
| AAAATCCAGCAACTAAAGCA+CGG | 0.599026 | 2_3:+48505275 | None:intergenic |
| GAGAAGAGTTAATGATGCAG+CGG | 0.601976 | 2_3:-48502735 | Msa0295790:CDS |
| ATCTAAGAATGTGTTGGGTG+TGG | 0.602955 | 2_3:+48507053 | None:intergenic |
| AACTCACCCCAACAAGAACA+AGG | 0.602994 | 2_3:-48506696 | Msa0295790:intron |
| TGCCCGAGTAACTCAGCAGA+AGG | 0.603687 | 2_3:-48502545 | Msa0295790:CDS |
| GGTGCGGCTGAATTCACAAA+CGG | 0.605269 | 2_3:-48503294 | Msa0295790:CDS |
| AATCATGATCATGCAATGAG+AGG | 0.606760 | 2_3:-48502151 | Msa0295790:CDS |
| ACACCATCATCTGATGGAAG+GGG | 0.607256 | 2_3:-48504434 | Msa0295790:CDS |
| AATCATGGTATGAAAGACAC+TGG | 0.607443 | 2_3:-48502280 | Msa0295790:CDS |
| TGAGGAGATCATCTGGCTCG+TGG | 0.608106 | 2_3:+48503229 | None:intergenic |
| AGTTGCAAGGCGATCGATGG+TGG | 0.608540 | 2_3:+48502567 | None:intergenic |
| GAGGAGATCATCTGGCTCGT+GGG | 0.610794 | 2_3:+48503230 | None:intergenic |
| AGACTTCTTTGACTTCAGCA+AGG | 0.611959 | 2_3:-48502660 | Msa0295790:CDS |
| AGGAAATGTGTCATATGCCG+AGG | 0.612975 | 2_3:-48505524 | Msa0295790:CDS |
| TGTGAATGTACTGTGGATGA+TGG | 0.613203 | 2_3:+48504387 | None:intergenic |
| TATATAGCATCCAATGGAGA+CGG | 0.614105 | 2_3:-48504023 | Msa0295790:CDS |
| CGAGCCAGATGATCTCCTCA+TGG | 0.614234 | 2_3:-48503226 | Msa0295790:CDS |
| GGTTTCAGACGTTGTCGGTG+CGG | 0.614474 | 2_3:-48503310 | Msa0295790:CDS |
| AAAGATCAGATTTCAAAAGG+TGG | 0.615886 | 2_3:-48506505 | Msa0295790:CDS |
| GGAAATGTGTCATATGCCGA+GGG | 0.617221 | 2_3:-48505523 | Msa0295790:CDS |
| ATTATCCTGGGAATATGCAA+TGG | 0.619307 | 2_3:-48504286 | Msa0295790:CDS |
| GCTTTGCAAAGAACAAGCAA+TGG | 0.626293 | 2_3:-48505305 | Msa0295790:CDS |
| TATGCAATGGCCTCCAAACG+GGG | 0.626868 | 2_3:-48504273 | Msa0295790:CDS |
| GAGAGGGAATTGGACAGTAA+GGG | 0.627614 | 2_3:-48503588 | Msa0295790:CDS |
| TAGTGACGTCTGCTTCGTGG+TGG | 0.628728 | 2_3:+48503649 | None:intergenic |
| TTCCCAGGATAATAGGAAGA+CGG | 0.630202 | 2_3:+48504296 | None:intergenic |
| AGCAACTAAAGCACGGGCGT+AGG | 0.633124 | 2_3:+48505282 | None:intergenic |
| ATGGAAGGGGCCAAATGCCG+AGG | 0.633588 | 2_3:-48504421 | Msa0295790:CDS |
| TTGTTTCTTATGCTGACGAG+AGG | 0.636767 | 2_3:+48503881 | None:intergenic |
| ATGGAAATGAAGAGAACTCG+AGG | 0.639282 | 2_3:-48505465 | Msa0295790:intron |
| ACATACTGCTGTGAATCCAA+AGG | 0.639842 | 2_3:-48502002 | Msa0295790:CDS |
| AGATTCAGGACATAGAGTGA+TGG | 0.644079 | 2_3:+48506477 | None:intergenic |
| GAAGAATGAAATCAAAACCT+CGG | 0.644561 | 2_3:-48502356 | Msa0295790:CDS |
| GACTTGATGATTGTTGCTGG+TGG | 0.645522 | 2_3:-48506589 | Msa0295790:CDS |
| AGCATGGAAAGAAGTCGTCA+AGG | 0.649026 | 2_3:-48504070 | Msa0295790:CDS |
| GAAGAAATGGATAAATGATG+AGG | 0.650351 | 2_3:-48501870 | Msa0295790:CDS |
| TGCATTGCTTGGTTACTCGG+CGG | 0.650770 | 2_3:+48501911 | None:intergenic |
| ATTCCTTTATTGTGGCAGAG+AGG | 0.650977 | 2_3:-48503605 | Msa0295790:CDS |
| TGGAAATTCCTTGAAACACA+AGG | 0.651370 | 2_3:-48503946 | Msa0295790:CDS |
| TTATTATCGACACGAAGTGA+AGG | 0.656765 | 2_3:+48502091 | None:intergenic |
| CAACAAACGCCTCCATACCA+AGG | 0.657689 | 2_3:-48504344 | Msa0295790:CDS |
| TGGAGTTGAATCAGAAACTG+AGG | 0.660489 | 2_3:+48504924 | None:intergenic |
| GCACTCCAGAAGTTATAGAG+AGG | 0.660533 | 2_3:-48505873 | Msa0295790:CDS |
| TGAAAATTGTGAATGTACTG+TGG | 0.661098 | 2_3:+48504380 | None:intergenic |
| GAAATGGATAAATGATGAGG+CGG | 0.662867 | 2_3:-48501867 | Msa0295790:CDS |
| CTTGCAGGTGAAGATGACTC+GGG | 0.668791 | 2_3:-48504973 | Msa0295790:CDS |
| TTTGACAGGCAACACTACCG+AGG | 0.677640 | 2_3:+48502339 | None:intergenic |
| AGACACTGGAGTGCTGACCA+AGG | 0.680935 | 2_3:-48502266 | Msa0295790:CDS |
| GGGTTGCGAAGACACCTGCA+TGG | 0.691437 | 2_3:+48505029 | None:intergenic |
| AAGGTGGCTTTGGTGAACCA+TGG | 0.696142 | 2_3:+48506445 | None:intergenic |
| GACAAAGAAAATTACCAGCG+AGG | 0.702798 | 2_3:-48503511 | Msa0295790:CDS |
| ACAATCTATAATGCTTCACA+TGG | 0.709087 | 2_3:+48506819 | None:intergenic |
| ATCATGTCAGTATTATGTCG+AGG | 0.719332 | 2_3:+48502064 | None:intergenic |
| AATCACGATCGAGAACCATG+AGG | 0.748541 | 2_3:+48503211 | None:intergenic |
| GAAATGTGTCATATGCCGAG+GGG | 0.758314 | 2_3:-48505522 | Msa0295790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATATATCATATAGTT+GGG | - | chr2_3:48504103-48504122 | Msa0295790:CDS | 10.0% |
| !! | CAACTTTACAAAAATAAAAA+AGG | - | chr2_3:48502218-48502237 | Msa0295790:CDS | 15.0% |
| !! | AAACATAGATGAAAAATTAT+CGG | + | chr2_3:48503509-48503528 | None:intergenic | 15.0% |
| !!! | AAATGATTGTTCTTTTTTTT+AGG | + | chr2_3:48504062-48504081 | None:intergenic | 15.0% |
| !! | GATAAAATATATCATATAGT+TGG | - | chr2_3:48504102-48504121 | Msa0295790:CDS | 15.0% |
| !! | ATGCTATATAGTTTATATTA+CGG | + | chr2_3:48504848-48504867 | None:intergenic | 15.0% |
| !! | TTCCTATTAATTGAAAATAA+AGG | + | chr2_3:48506107-48506126 | None:intergenic | 15.0% |
| !! | TGAATTGAATTGAATTGAAT+TGG | - | chr2_3:48501868-48501887 | Msa0295790:CDS | 20.0% |
| !! | AATTGAATACATAAAGAAAG+AGG | + | chr2_3:48502036-48502055 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAACCTTTGCA+AGG | + | chr2_3:48502458-48502477 | None:intergenic | 20.0% |
| !!! | AAATATTTTCAATGATCTGA+TGG | - | chr2_3:48502605-48502624 | Msa0295790:CDS | 20.0% |
| !!! | TGTGTTGGTTTATTTTATAT+AGG | - | chr2_3:48502969-48502988 | Msa0295790:CDS | 20.0% |
| !! | TAATTAAGAACAATGATGAA+CGG | + | chr2_3:48503143-48503162 | None:intergenic | 20.0% |
| !!! | TTTCATCTATGTTTTATTGT+AGG | - | chr2_3:48503515-48503534 | Msa0295790:CDS | 20.0% |
| !!! | TTCATCTATGTTTTATTGTA+GGG | - | chr2_3:48503516-48503535 | Msa0295790:CDS | 20.0% |
| !!! | AGAAAAATGTACTGTTTTAA+TGG | + | chr2_3:48503729-48503748 | None:intergenic | 20.0% |
| !! | CTATACTTGAATTAATAGAA+AGG | + | chr2_3:48504202-48504221 | None:intergenic | 20.0% |
| !! | CTTTCTATTAATTCAAGTAT+AGG | - | chr2_3:48504200-48504219 | Msa0295790:CDS | 20.0% |
| !! | GAATTAAATTGATATTCCAA+TGG | + | chr2_3:48505527-48505546 | None:intergenic | 20.0% |
| !! | ATTAGATACAAGATTTCTTT+CGG | + | chr2_3:48505795-48505814 | None:intergenic | 20.0% |
| !! | GAAAGCTATAGATAATATTA+AGG | + | chr2_3:48506043-48506062 | None:intergenic | 20.0% |
| !!! | GACCTTTATTTTCAATTAAT+AGG | - | chr2_3:48506102-48506121 | Msa0295790:intron | 20.0% |
| !! | AAATATCTTGAATGTTTATC+TGG | + | chr2_3:48506646-48506665 | None:intergenic | 20.0% |
| !! | GAAATCTTACATGAAAATAT+CGG | - | chr2_3:48506679-48506698 | Msa0295790:intron | 20.0% |
| !! | AGACATATACACATGTATTT+TGG | + | chr2_3:48501921-48501940 | None:intergenic | 25.0% |
| !!! | ATTTGTTGAGTTTTGAAAGT+GGG | + | chr2_3:48502006-48502025 | None:intergenic | 25.0% |
| !!! | AATTTGTTGAGTTTTGAAAG+TGG | + | chr2_3:48502007-48502026 | None:intergenic | 25.0% |
| ! | TATAGATTGTAGATGAAGTT+TGG | - | chr2_3:48502075-48502094 | Msa0295790:CDS | 25.0% |
| !!! | AGGTTGTTTTTGTTTTTTGT+TGG | - | chr2_3:48502238-48502257 | Msa0295790:CDS | 25.0% |
| !!! | TCTTTTGGTTTTTGATAGAT+TGG | - | chr2_3:48502486-48502505 | Msa0295790:CDS | 25.0% |
| ! | ATTGTAGTGGCAATATATAA+AGG | + | chr2_3:48502883-48502902 | None:intergenic | 25.0% |
| !!! | ACCATAGTTTTAAATTGTAG+TGG | + | chr2_3:48502896-48502915 | None:intergenic | 25.0% |
| ! | TTAGCAAATAGTATCTTTGT+AGG | - | chr2_3:48503290-48503309 | Msa0295790:CDS | 25.0% |
| ! | AACAATACTATGTGATTAAC+AGG | - | chr2_3:48503337-48503356 | Msa0295790:CDS | 25.0% |
| ! | ATATCTAATTTACTGCTAAG+TGG | + | chr2_3:48504292-48504311 | None:intergenic | 25.0% |
| ! | ACAACTTAGATATCTTGTAA+AGG | - | chr2_3:48504357-48504376 | Msa0295790:CDS | 25.0% |
| ! | ATAAACTATATAGCATCCAA+TGG | - | chr2_3:48504852-48504871 | Msa0295790:intron | 25.0% |
| ! | AATGAGGAAGAATTTATCAA+TGG | - | chr2_3:48504915-48504934 | Msa0295790:CDS | 25.0% |
| ! | TATTCTTCCTGAAATTTCAT+TGG | + | chr2_3:48505167-48505186 | None:intergenic | 25.0% |
| ! | TTCAAATGATTCCTTTATTG+TGG | - | chr2_3:48505268-48505287 | Msa0295790:CDS | 25.0% |
| ! | AATCTTGTATCTAATCATGA+AGG | - | chr2_3:48505800-48505819 | Msa0295790:intron | 25.0% |
| ! | AAGACAAAGTCACATATATA+TGG | + | chr2_3:48506019-48506038 | None:intergenic | 25.0% |
| !! | TTGAAGATTTCACTTCTTTT+TGG | + | chr2_3:48506444-48506463 | None:intergenic | 25.0% |
| ! | AAGATGCACATAAAACAAAA+GGG | - | chr2_3:48506473-48506492 | Msa0295790:CDS | 25.0% |
| !!! | GTATGTATTAATGGTTTGTT+AGG | + | chr2_3:48506865-48506884 | None:intergenic | 25.0% |
| AGTTAACAAGAACGTGAAAA+TGG | - | chr2_3:48501796-48501815 | Msa0295790:exon | 30.0% | |
| TCCAAATCTAAGAATGTGTT+GGG | + | chr2_3:48501836-48501855 | None:intergenic | 30.0% | |
| ATCCAAATCTAAGAATGTGT+TGG | + | chr2_3:48501837-48501856 | None:intergenic | 30.0% | |
| ACTAACACATTATGTTCTGT+TGG | - | chr2_3:48501974-48501993 | Msa0295790:CDS | 30.0% | |
| ACAATCTATAATGCTTCACA+TGG | + | chr2_3:48502065-48502084 | None:intergenic | 30.0% | |
| TGAAAGCTCTCAAACTTTAA+AGG | + | chr2_3:48502108-48502127 | None:intergenic | 30.0% | |
| AAAAGAACCTTGTTCTTGTT+GGG | + | chr2_3:48502195-48502214 | None:intergenic | 30.0% | |
| TAAAAGAACCTTGTTCTTGT+TGG | + | chr2_3:48502196-48502215 | None:intergenic | 30.0% | |
| !! | TTAATGAAAGACTAGCTTCT+GGG | - | chr2_3:48502317-48502336 | Msa0295790:CDS | 30.0% |
| ! | CATTTAAGGTGAGAAACAAA+CGG | + | chr2_3:48502352-48502371 | None:intergenic | 30.0% |
| ! | TCTGATCTTTTGCACATTTA+AGG | + | chr2_3:48502366-48502385 | None:intergenic | 30.0% |
| GCAAAAGATCAGATTTCAAA+AGG | - | chr2_3:48502373-48502392 | Msa0295790:CDS | 30.0% | |
| AAAGATCAGATTTCAAAAGG+TGG | - | chr2_3:48502376-48502395 | Msa0295790:CDS | 30.0% | |
| AAAAAAAAACCTTTGCAAGG+TGG | + | chr2_3:48502455-48502474 | None:intergenic | 30.0% | |
| ! | TGTGACTTTGGAAATAGTTA+TGG | - | chr2_3:48502574-48502593 | Msa0295790:CDS | 30.0% |
| ACTAAAAGAGGATTAATCCT+TGG | + | chr2_3:48502733-48502752 | None:intergenic | 30.0% | |
| !! | TTAATCCTCTTTTAGTTACC+AGG | - | chr2_3:48502737-48502756 | Msa0295790:CDS | 30.0% |
| !! | TAATCCTCTTTTAGTTACCA+GGG | - | chr2_3:48502738-48502757 | Msa0295790:CDS | 30.0% |
| ! | GCCACTACAATTTAAAACTA+TGG | - | chr2_3:48502892-48502911 | Msa0295790:intron | 30.0% |
| ACAATGATGTTTGTTTGTGT+TGG | - | chr2_3:48502954-48502973 | Msa0295790:CDS | 30.0% | |
| AGTCAATCAAATGAAGTAGA+AGG | - | chr2_3:48503073-48503092 | Msa0295790:CDS | 30.0% | |
| ATCAAATGAAGTAGAAGGTA+TGG | - | chr2_3:48503078-48503097 | Msa0295790:CDS | 30.0% | |
| AACAATGATGAACGGAATAA+AGG | + | chr2_3:48503135-48503154 | None:intergenic | 30.0% | |
| TTCTTAATTAAACTTCCTCG+TGG | - | chr2_3:48503153-48503172 | Msa0295790:CDS | 30.0% | |
| CAAAGATGTGTGCATATATA+AGG | + | chr2_3:48503457-48503476 | None:intergenic | 30.0% | |
| GAAACAAATAAGATCATCCA+TGG | + | chr2_3:48503641-48503660 | None:intergenic | 30.0% | |
| TATAATTTCCTGTCATGTGT+AGG | - | chr2_3:48503756-48503775 | Msa0295790:CDS | 30.0% | |
| ATAATTTCCTGTCATGTGTA+GGG | - | chr2_3:48503757-48503776 | Msa0295790:CDS | 30.0% | |
| !! | TTTTAGGAACACTTTTACTC+AGG | + | chr2_3:48504046-48504065 | None:intergenic | 30.0% |
| TACAACTTGTGTCTAAATAC+TGG | - | chr2_3:48504233-48504252 | Msa0295790:CDS | 30.0% | |
| !!! | CCAGTATTTTTTTTGAAGGA+TGG | + | chr2_3:48504264-48504283 | None:intergenic | 30.0% |
| CCATCCTTCAAAAAAAATAC+TGG | - | chr2_3:48504261-48504280 | Msa0295790:CDS | 30.0% | |
| !!! | CAGTCCAGTATTTTTTTTGA+AGG | + | chr2_3:48504268-48504287 | None:intergenic | 30.0% |
| CAATAAGAGTAACAAACTTC+TGG | + | chr2_3:48504385-48504404 | None:intergenic | 30.0% | |
| TGAAAATTGTGAATGTACTG+TGG | + | chr2_3:48504504-48504523 | None:intergenic | 30.0% | |
| ! | ACAGTACATTCACAATTTTC+AGG | - | chr2_3:48504503-48504522 | Msa0295790:intron | 30.0% |
| ! | CAGTACATTCACAATTTTCA+GGG | - | chr2_3:48504504-48504523 | Msa0295790:intron | 30.0% |
| GAAGAAAAACAAGAAATCTC+AGG | - | chr2_3:48504665-48504684 | Msa0295790:intron | 30.0% | |
| AAACAAGAAATCTCAGGTAT+TGG | - | chr2_3:48504671-48504690 | Msa0295790:intron | 30.0% | |
| AAGCAAAAAGAACTCTTCAA+CGG | - | chr2_3:48504770-48504789 | Msa0295790:intron | 30.0% | |
| AAAAAGGTAGTATCACTGAA+GGG | - | chr2_3:48504883-48504902 | Msa0295790:intron | 30.0% | |
| GCAAAAAGGTAATAACAACT+GGG | - | chr2_3:48505079-48505098 | Msa0295790:CDS | 30.0% | |
| GATGATTCTACTCATGATAT+AGG | - | chr2_3:48505134-48505153 | Msa0295790:intron | 30.0% | |
| AAAACAGCCAATGAAATTTC+AGG | - | chr2_3:48505157-48505176 | Msa0295790:intron | 30.0% | |
| GTGTTGAATATTTCAACGAA+GGG | - | chr2_3:48505324-48505343 | Msa0295790:CDS | 30.0% | |
| ATCTCAGAGAAATGATGAAT+CGG | - | chr2_3:48505403-48505422 | Msa0295790:intron | 30.0% | |
| ! | TGGGAAAATTTCAAGTAAAG+AGG | - | chr2_3:48505853-48505872 | Msa0295790:CDS | 30.0% |
| !!! | GATTTGGTTTTAGATGCATT+TGG | + | chr2_3:48505893-48505912 | None:intergenic | 30.0% |
| GCTTTCATTTGCAAATTCAT+AGG | - | chr2_3:48506057-48506076 | Msa0295790:intron | 30.0% | |
| GAAGATGCACATAAAACAAA+AGG | - | chr2_3:48506472-48506491 | Msa0295790:CDS | 30.0% | |
| GAAGAATGAAATCAAAACCT+CGG | - | chr2_3:48506525-48506544 | Msa0295790:CDS | 30.0% | |
| TTCACAGCAGTATGTATTAA+TGG | + | chr2_3:48506874-48506893 | None:intergenic | 30.0% | |
| !! | ATTTGAATCTCTGAGACTTT+AGG | + | chr2_3:48506940-48506959 | None:intergenic | 30.0% |
| GAAGAAATGGATAAATGATG+AGG | - | chr2_3:48507011-48507030 | Msa0295790:five_prime_UTR | 30.0% | |
| TTCCAAAGAAGATAAGCTTA+CGG | + | chr2_3:48507065-48507084 | None:intergenic | 30.0% | |
| !! | CAAAAAGTATCAATCCACAA+AGG | + | chr2_3:48507103-48507122 | None:intergenic | 30.0% |
| !! | CTTTGTGGATTGATACTTTT+TGG | - | chr2_3:48507101-48507120 | Msa0295790:five_prime_UTR | 30.0% |
| !! | GATTGATACTTTTTGGCAAA+GGG | - | chr2_3:48507108-48507127 | Msa0295790:five_prime_UTR | 30.0% |
| !! | ATTGATACTTTTTGGCAAAG+GGG | - | chr2_3:48507109-48507128 | Msa0295790:five_prime_UTR | 30.0% |
| AACCTAAAGCAAAACTCTCT+TGG | - | chr2_3:48501767-48501786 | Msa0295790:three_prime_UTR | 35.0% | |
| ! | ATCCAAGAGAGTTTTGCTTT+AGG | + | chr2_3:48501772-48501791 | None:intergenic | 35.0% |
| ACCCAACACATTCTTAGATT+TGG | - | chr2_3:48501832-48501851 | Msa0295790:CDS | 35.0% | |
| CACATTATGTTCTGTTGGAT+TGG | - | chr2_3:48501979-48501998 | Msa0295790:CDS | 35.0% | |
| CAATACTCTAACTCTAGCTA+TGG | - | chr2_3:48502129-48502148 | Msa0295790:CDS | 35.0% | |
| GCATGATCAAGATAAGAACT+TGG | + | chr2_3:48502157-48502176 | None:intergenic | 35.0% | |
| AAAGAACCTTGTTCTTGTTG+GGG | + | chr2_3:48502194-48502213 | None:intergenic | 35.0% | |
| !! | GTTAATGAAAGACTAGCTTC+TGG | - | chr2_3:48502316-48502335 | Msa0295790:CDS | 35.0% |
| CTACATTGAGAACACTTTCA+AGG | + | chr2_3:48502687-48502706 | None:intergenic | 35.0% | |
| ! | ATGAGTTTTTGATCTCACCA+AGG | - | chr2_3:48502713-48502732 | Msa0295790:CDS | 35.0% |
| !!! | CGGATCAAGGTTTTAAATTG+CGG | - | chr2_3:48502761-48502780 | Msa0295790:intron | 35.0% |
| ! | AGCAACTTTTCACAATGTCA+AGG | + | chr2_3:48502805-48502824 | None:intergenic | 35.0% |
| ACAAACCTCTCTATAACTTC+TGG | + | chr2_3:48503016-48503035 | None:intergenic | 35.0% | |
| ! | AATGAAGTAGAAGGTATGGA+TGG | - | chr2_3:48503082-48503101 | Msa0295790:CDS | 35.0% |
| ! | ATGAAGTAGAAGGTATGGAT+GGG | - | chr2_3:48503083-48503102 | Msa0295790:CDS | 35.0% |
| ATGGGATCTCATAATCATAC+TGG | - | chr2_3:48503101-48503120 | Msa0295790:CDS | 35.0% | |
| TCATAATCATACTGGTGTCT+CGG | - | chr2_3:48503109-48503128 | Msa0295790:CDS | 35.0% | |
| CAGATGTGGGAAAAAAATAG+TGG | + | chr2_3:48503210-48503229 | None:intergenic | 35.0% | |
| GTAAAGCTTCCGTGTAAAAT+CGG | + | chr2_3:48503234-48503253 | None:intergenic | 35.0% | |
| ACTATTTCCTCCAATCAAGA+TGG | - | chr2_3:48503397-48503416 | Msa0295790:CDS | 35.0% | |
| TTCATTTCCATCTTGATTGG+AGG | + | chr2_3:48503407-48503426 | None:intergenic | 35.0% | |
| CTCTTCATTTCCATCTTGAT+TGG | + | chr2_3:48503410-48503429 | None:intergenic | 35.0% | |
| AAGAGAACTCGAGGTATATT+TGG | - | chr2_3:48503425-48503444 | Msa0295790:CDS | 35.0% | |
| AAAATCCAGCAACTAAAGCA+CGG | + | chr2_3:48503609-48503628 | None:intergenic | 35.0% | |
| ! | TGGATTTTATCCAGAATCCA+TGG | - | chr2_3:48503621-48503640 | Msa0295790:CDS | 35.0% |
| ATAAGATCATCCATGGATTC+TGG | + | chr2_3:48503634-48503653 | None:intergenic | 35.0% | |
| AAAAGAATGAAGACAAGCTG+TGG | - | chr2_3:48503813-48503832 | Msa0295790:CDS | 35.0% | |
| TGTCCTTAAGTAAGGCAATA+CGG | + | chr2_3:48503876-48503895 | None:intergenic | 35.0% | |
| ATTCCAGATGTCCTTAAGTA+AGG | + | chr2_3:48503884-48503903 | None:intergenic | 35.0% | |
| GACTCGGGAAGTAAAATAAA+TGG | - | chr2_3:48503923-48503942 | Msa0295790:CDS | 35.0% | |
| GGGAAGTAAAATAAATGGCA+CGG | - | chr2_3:48503928-48503947 | Msa0295790:CDS | 35.0% | |
| GGAAGTAAAATAAATGGCAC+GGG | - | chr2_3:48503929-48503948 | Msa0295790:CDS | 35.0% | |
| AATCCACTTGGTATTTACCT+TGG | + | chr2_3:48504006-48504025 | None:intergenic | 35.0% | |
| TTGCATATTCCCAGGATAAT+AGG | + | chr2_3:48504595-48504614 | None:intergenic | 35.0% | |
| ATTATCCTGGGAATATGCAA+TGG | - | chr2_3:48504595-48504614 | Msa0295790:intron | 35.0% | |
| TATATAGCATCCAATGGAGA+CGG | - | chr2_3:48504858-48504877 | Msa0295790:intron | 35.0% | |
| GAAAAAGGTAGTATCACTGA+AGG | - | chr2_3:48504882-48504901 | Msa0295790:intron | 35.0% | |
| TGGAAATTCCTTGAAACACA+AGG | - | chr2_3:48504935-48504954 | Msa0295790:CDS | 35.0% | |
| TTGAACCATTTAGCATGTCA+TGG | + | chr2_3:48505040-48505059 | None:intergenic | 35.0% | |
| ATGACATGCTAAATGGTTCA+AGG | - | chr2_3:48505039-48505058 | Msa0295790:CDS | 35.0% | |
| GGCAAAAAGGTAATAACAAC+TGG | - | chr2_3:48505078-48505097 | Msa0295790:CDS | 35.0% | |
| ATGAGCAAGAAGTTTGAGAA+TGG | - | chr2_3:48505191-48505210 | Msa0295790:intron | 35.0% | |
| CGTGTTGAATATTTCAACGA+AGG | - | chr2_3:48505323-48505342 | Msa0295790:CDS | 35.0% | |
| TGAATATTTCAACGAAGGGA+AGG | - | chr2_3:48505328-48505347 | Msa0295790:CDS | 35.0% | |
| TCTCAGAGAAATGATGAATC+GGG | - | chr2_3:48505404-48505423 | Msa0295790:intron | 35.0% | |
| !!! | CCTTTCTTGTTTTTCTCTAC+AGG | + | chr2_3:48505467-48505486 | None:intergenic | 35.0% |
| CCTGTAGAGAAAAACAAGAA+AGG | - | chr2_3:48505464-48505483 | Msa0295790:intron | 35.0% | |
| AACAGCTTCTGATATCAGTT+TGG | - | chr2_3:48505550-48505569 | Msa0295790:intron | 35.0% | |
| TTATCCATTTCCATTCTCCA+AGG | + | chr2_3:48505719-48505738 | None:intergenic | 35.0% | |
| ! | CGCTCCAGTATTTTTCTTAT+CGG | + | chr2_3:48505828-48505847 | None:intergenic | 35.0% |
| AAAAATACTGGAGCGAAATC+TGG | - | chr2_3:48505833-48505852 | Msa0295790:CDS | 35.0% | |
| AAAATACTGGAGCGAAATCT+GGG | - | chr2_3:48505834-48505853 | Msa0295790:CDS | 35.0% | |
| TCTTGACATGACATCAGATT+TGG | + | chr2_3:48505909-48505928 | None:intergenic | 35.0% | |
| CACATATATATGGTCGAGAA+TGG | + | chr2_3:48506009-48506028 | None:intergenic | 35.0% | |
| CCATTAGATGGATGAATCTT+AGG | + | chr2_3:48506256-48506275 | None:intergenic | 35.0% | |
| CCTAAGATTCATCCATCTAA+TGG | - | chr2_3:48506253-48506272 | Msa0295790:intron | 35.0% | |
| TTCTTAGTCTCTCCATTAGA+TGG | + | chr2_3:48506268-48506287 | None:intergenic | 35.0% | |
| TCACCTAATCAAGCAAATTC+AGG | - | chr2_3:48506361-48506380 | Msa0295790:intron | 35.0% | |
| GAACAAAGCAACAACAATCA+TGG | - | chr2_3:48506586-48506605 | Msa0295790:CDS | 35.0% | |
| AATCATGGTATGAAAGACAC+TGG | - | chr2_3:48506601-48506620 | Msa0295790:intron | 35.0% | |
| AATCATGATCATGCAATGAG+AGG | - | chr2_3:48506730-48506749 | Msa0295790:CDS | 35.0% | |
| TTATTATCGACACGAAGTGA+AGG | + | chr2_3:48506793-48506812 | None:intergenic | 35.0% | |
| ATCATGTCAGTATTATGTCG+AGG | + | chr2_3:48506820-48506839 | None:intergenic | 35.0% | |
| TCTATTTCCTGATTCACCTT+TGG | + | chr2_3:48506898-48506917 | None:intergenic | 35.0% | |
| TTATCCATTTCTTCCTGTTG+TGG | + | chr2_3:48507005-48507024 | None:intergenic | 35.0% | |
| GAAATGGATAAATGATGAGG+CGG | - | chr2_3:48507014-48507033 | Msa0295790:five_prime_UTR | 35.0% | |
| TTCCGTAAGCTTATCTTCTT+TGG | - | chr2_3:48507060-48507079 | Msa0295790:five_prime_UTR | 35.0% | |
| ! | AGCTTATCTTCTTTGGAAGA+AGG | - | chr2_3:48507067-48507086 | Msa0295790:five_prime_UTR | 35.0% |
| !! | GGATTGATACTTTTTGGCAA+AGG | - | chr2_3:48507107-48507126 | Msa0295790:five_prime_UTR | 35.0% |
| ATCTAAGAATGTGTTGGGTG+TGG | + | chr2_3:48501831-48501850 | None:intergenic | 40.0% | |
| ! | TGTGACTTGATGATTGTTGC+TGG | - | chr2_3:48502289-48502308 | Msa0295790:CDS | 40.0% |
| AGATTCAGGACATAGAGTGA+TGG | + | chr2_3:48502407-48502426 | None:intergenic | 40.0% | |
| CATGGAGCATATGTAGATTC+AGG | + | chr2_3:48502421-48502440 | None:intergenic | 40.0% | |
| CTGAATCTACATATGCTCCA+TGG | - | chr2_3:48502419-48502438 | Msa0295790:CDS | 40.0% | |
| ATCACTCATGTGTGTGACTT+TGG | - | chr2_3:48502562-48502581 | Msa0295790:CDS | 40.0% | |
| ATGCGACTACAATTGCATTG+CGG | - | chr2_3:48502839-48502858 | Msa0295790:intron | 40.0% | |
| ! | CTACAATTGCATTGCGGTTT+TGG | - | chr2_3:48502845-48502864 | Msa0295790:intron | 40.0% |
| GAGGTTTGTGACCATAGAAA+AGG | - | chr2_3:48503027-48503046 | Msa0295790:CDS | 40.0% | |
| ! | CTGCACAATCTCCTTTTCTA+TGG | + | chr2_3:48503041-48503060 | None:intergenic | 40.0% |
| AAGGAGATTGTGCAGATTGA+AGG | - | chr2_3:48503046-48503065 | Msa0295790:CDS | 40.0% | |
| GTGTAAAATCGGACAGATGT+GGG | + | chr2_3:48503223-48503242 | None:intergenic | 40.0% | |
| ! | CACATCTGTCCGATTTTACA+CGG | - | chr2_3:48503222-48503241 | Msa0295790:CDS | 40.0% |
| ATGGAAATGAAGAGAACTCG+AGG | - | chr2_3:48503416-48503435 | Msa0295790:CDS | 40.0% | |
| CACACATCTTTGTACTCTTC+AGG | - | chr2_3:48503465-48503484 | Msa0295790:CDS | 40.0% | |
| ! | GATTGTCTAGAACACGTTGA+AGG | + | chr2_3:48503546-48503565 | None:intergenic | 40.0% |
| GCTTTGCAAAGAACAAGCAA+TGG | - | chr2_3:48503576-48503595 | Msa0295790:CDS | 40.0% | |
| AAATCCAGCAACTAAAGCAC+GGG | + | chr2_3:48503608-48503627 | None:intergenic | 40.0% | |
| ! | ATTTGTTTCGCTGACGCTTT+TGG | - | chr2_3:48503652-48503671 | Msa0295790:CDS | 40.0% |
| !!! | CTTTTGGAGCTTCACGTTTA+AGG | - | chr2_3:48503668-48503687 | Msa0295790:CDS | 40.0% |
| TAAGGTCTGCGAGCATATAT+TGG | - | chr2_3:48503686-48503705 | Msa0295790:CDS | 40.0% | |
| AACCCGTATTGCCTTACTTA+AGG | - | chr2_3:48503870-48503889 | Msa0295790:CDS | 40.0% | |
| GTCCTTAAGTAAGGCAATAC+GGG | + | chr2_3:48503875-48503894 | None:intergenic | 40.0% | |
| TTGCCTTACTTAAGGACATC+TGG | - | chr2_3:48503878-48503897 | Msa0295790:CDS | 40.0% | |
| ! | ACATCTGGAATCATACTTGC+AGG | - | chr2_3:48503893-48503912 | Msa0295790:CDS | 40.0% |
| TGGAGTTGAATCAGAAACTG+AGG | + | chr2_3:48503960-48503979 | None:intergenic | 40.0% | |
| ! | ACCAAGTGGATTCAGTATGT+TGG | - | chr2_3:48504014-48504033 | Msa0295790:CDS | 40.0% |
| ACCAACATACTGAATCCACT+TGG | + | chr2_3:48504018-48504037 | None:intergenic | 40.0% | |
| GTTCAAACACCATCATCTGA+TGG | - | chr2_3:48504441-48504460 | Msa0295790:CDS | 40.0% | |
| AAACACCATCATCTGATGGA+AGG | - | chr2_3:48504445-48504464 | Msa0295790:CDS | 40.0% | |
| AACACCATCATCTGATGGAA+GGG | - | chr2_3:48504446-48504465 | Msa0295790:CDS | 40.0% | |
| ! | ATGTACTGTGGATGATGGTT+CGG | + | chr2_3:48504492-48504511 | None:intergenic | 40.0% |
| TGTGAATGTACTGTGGATGA+TGG | + | chr2_3:48504497-48504516 | None:intergenic | 40.0% | |
| TACATGTATCCTTGGTATGG+AGG | + | chr2_3:48504549-48504568 | None:intergenic | 40.0% | |
| GGATACATGTATCCTTGGTA+TGG | + | chr2_3:48504552-48504571 | None:intergenic | 40.0% | |
| TACCAAGGATACATGTATCC+TGG | - | chr2_3:48504552-48504571 | Msa0295790:intron | 40.0% | |
| TACCAGGATACATGTATCCT+TGG | + | chr2_3:48504557-48504576 | None:intergenic | 40.0% | |
| ATACATGTATCCTGGTATGC+AGG | - | chr2_3:48504560-48504579 | Msa0295790:intron | 40.0% | |
| TTCCGTCTTCCTATTATCCT+GGG | - | chr2_3:48504583-48504602 | Msa0295790:intron | 40.0% | |
| TTCCCAGGATAATAGGAAGA+CGG | + | chr2_3:48504588-48504607 | None:intergenic | 40.0% | |
| AATATGCAATGGCCTCCAAA+CGG | - | chr2_3:48504606-48504625 | Msa0295790:intron | 40.0% | |
| TTCCTTGAAACACAAGGTAG+AGG | - | chr2_3:48504941-48504960 | Msa0295790:CDS | 40.0% | |
| TTCCTCTACCTTGTGTTTCA+AGG | + | chr2_3:48504946-48504965 | None:intergenic | 40.0% | |
| ! | TTGTTTCTTATGCTGACGAG+AGG | + | chr2_3:48505003-48505022 | None:intergenic | 40.0% |
| AAGCACCATGACATGCTAAA+TGG | - | chr2_3:48505032-48505051 | Msa0295790:CDS | 40.0% | |
| !! | TCAAGGAATGCTGATTCCAA+CGG | - | chr2_3:48505056-48505075 | Msa0295790:CDS | 40.0% |
| ! | GTTATTACCTTTTTGCCCGT+TGG | + | chr2_3:48505075-48505094 | None:intergenic | 40.0% |
| CGTCTCTCAAAAGAAGATTC+TGG | + | chr2_3:48505112-48505131 | None:intergenic | 40.0% | |
| GCAAGAAGTTTGAGAATGGA+AGG | - | chr2_3:48505195-48505214 | Msa0295790:intron | 40.0% | |
| ATTCCTTTATTGTGGCAGAG+AGG | - | chr2_3:48505276-48505295 | Msa0295790:CDS | 40.0% | |
| TTCCTTTATTGTGGCAGAGA+GGG | - | chr2_3:48505277-48505296 | Msa0295790:CDS | 40.0% | |
| TATTTCAACGAAGGGAAGGA+TGG | - | chr2_3:48505332-48505351 | Msa0295790:CDS | 40.0% | |
| GACAAAGAAAATTACCAGCG+AGG | - | chr2_3:48505370-48505389 | Msa0295790:intron | 40.0% | |
| AGATAACAACAATTCCTCGC+TGG | + | chr2_3:48505387-48505406 | None:intergenic | 40.0% | |
| ! | AGTTTGGTTTCAGACGTTGT+CGG | - | chr2_3:48505566-48505585 | Msa0295790:intron | 40.0% |
| TTCACAAACGGTACACAAGA+AGG | - | chr2_3:48505599-48505618 | Msa0295790:intron | 40.0% | |
| GTCAAGAAGTAGAACATTGC+CGG | - | chr2_3:48505922-48505941 | Msa0295790:intron | 40.0% | |
| TCAAGAAGTAGAACATTGCC+GGG | - | chr2_3:48505923-48505942 | Msa0295790:intron | 40.0% | |
| TACAGCTACGAAGAGCAAAT+CGG | - | chr2_3:48505955-48505974 | Msa0295790:intron | 40.0% | |
| TACGAAGAGCAAATCGGAAA+AGG | - | chr2_3:48505961-48505980 | Msa0295790:intron | 40.0% | |
| GAGAAGAGTTAATGATGCAG+CGG | - | chr2_3:48506146-48506165 | Msa0295790:intron | 40.0% | |
| ! | CTTCTTCAAGGCACTTCTTT+CGG | + | chr2_3:48506185-48506204 | None:intergenic | 40.0% |
| TTCTGTTCCAGTCTTCTTCA+AGG | + | chr2_3:48506197-48506216 | None:intergenic | 40.0% | |
| ! | AGACTTCTTTGACTTCAGCA+AGG | - | chr2_3:48506221-48506240 | Msa0295790:intron | 40.0% |
| ! | TCTTTGACTTCAGCAAGGAA+AGG | - | chr2_3:48506226-48506245 | Msa0295790:intron | 40.0% |
| ! | CTTTGACTTCAGCAAGGAAA+GGG | - | chr2_3:48506227-48506246 | Msa0295790:intron | 40.0% |
| AACTGAACAAACCAGTCCTT+AGG | - | chr2_3:48506287-48506306 | Msa0295790:intron | 40.0% | |
| AAACCTTCTGCTGAGTTACT+CGG | + | chr2_3:48506342-48506361 | None:intergenic | 40.0% | |
| ! | GGACCTGAATTTGCTTGATT+AGG | + | chr2_3:48506367-48506386 | None:intergenic | 40.0% |
| ! | ACCTTATTTGCCTTCAAGGA+AGG | + | chr2_3:48506400-48506419 | None:intergenic | 40.0% |
| ! | AGGTACCTTATTTGCCTTCA+AGG | + | chr2_3:48506404-48506423 | None:intergenic | 40.0% |
| GGGAAAATTCTTTCCAAGAG+TGG | - | chr2_3:48506493-48506512 | Msa0295790:CDS | 40.0% | |
| TGTCAGTATTATGTCGAGGT+TGG | + | chr2_3:48506816-48506835 | None:intergenic | 40.0% | |
| ACATACTGCTGTGAATCCAA+AGG | - | chr2_3:48506879-48506898 | Msa0295790:five_prime_UTR | 40.0% | |
| TGTGAATCCAAAGGTGAATC+AGG | - | chr2_3:48506888-48506907 | Msa0295790:five_prime_UTR | 40.0% | |
| TCTTGCATTGCTTGGTTACT+CGG | + | chr2_3:48506976-48506995 | None:intergenic | 40.0% | |
| ! | GGATTGATTCTTGCATTGCT+TGG | + | chr2_3:48506984-48507003 | None:intergenic | 40.0% |
| TGCAAGAATCAATCCACAAC+AGG | - | chr2_3:48506989-48507008 | Msa0295790:five_prime_UTR | 40.0% | |
| CAATCCACAACAGGAAGAAA+TGG | - | chr2_3:48506998-48507017 | Msa0295790:five_prime_UTR | 40.0% | |
| GACTCTTCAAAAGTAGCGAA+AGG | - | chr2_3:48507036-48507055 | Msa0295790:five_prime_UTR | 40.0% | |
| AGAATGTGTTGGGTGTGGTT+AGG | + | chr2_3:48501826-48501845 | None:intergenic | 45.0% | |
| AACTCACCCCAACAAGAACA+AGG | - | chr2_3:48502185-48502204 | Msa0295790:CDS | 45.0% | |
| ! | GACTTGATGATTGTTGCTGG+TGG | - | chr2_3:48502292-48502311 | Msa0295790:CDS | 45.0% |
| AAACCTTTGCAAGGTGGCTT+TGG | + | chr2_3:48502449-48502468 | None:intergenic | 45.0% | |
| !! | TCCTCTTTTAGTTACCAGGG+CGG | - | chr2_3:48502741-48502760 | Msa0295790:CDS | 45.0% |
| ! | TTTAAAACCTTGATCCGCCC+TGG | + | chr2_3:48502758-48502777 | None:intergenic | 45.0% |
| GCACTCCAGAAGTTATAGAG+AGG | - | chr2_3:48503008-48503027 | Msa0295790:CDS | 45.0% | |
| AAACTTCCTCGTGGTAAACG+TGG | - | chr2_3:48503162-48503181 | Msa0295790:CDS | 45.0% | |
| CGTGTAAAATCGGACAGATG+TGG | + | chr2_3:48503224-48503243 | None:intergenic | 45.0% | |
| AGGAAATGTGTCATATGCCG+AGG | - | chr2_3:48503357-48503376 | Msa0295790:CDS | 45.0% | |
| GGAAATGTGTCATATGCCGA+GGG | - | chr2_3:48503358-48503377 | Msa0295790:CDS | 45.0% | |
| GAAATGTGTCATATGCCGAG+GGG | - | chr2_3:48503359-48503378 | Msa0295790:CDS | 45.0% | |
| GAATGAAGACAAGCTGTGGA+TGG | - | chr2_3:48503817-48503836 | Msa0295790:CDS | 45.0% | |
| ACTTGCAGGTGAAGATGACT+CGG | - | chr2_3:48503907-48503926 | Msa0295790:CDS | 45.0% | |
| ATGTCGAAACTTGCATGGCT+TGG | + | chr2_3:48503980-48503999 | None:intergenic | 45.0% | |
| AGCCATGCAAGTTTCGACAT+TGG | - | chr2_3:48503980-48503999 | Msa0295790:CDS | 45.0% | |
| TGGCCAAGGTAAATACCAAG+TGG | - | chr2_3:48504000-48504019 | Msa0295790:CDS | 45.0% | |
| !! | AGTGCAAAAGCATCATGGGA+AGG | + | chr2_3:48504138-48504157 | None:intergenic | 45.0% |
| !! | GTCGAGTGCAAAAGCATCAT+GGG | + | chr2_3:48504142-48504161 | None:intergenic | 45.0% |
| GTCGAAGACGTATGCACAAT+TGG | + | chr2_3:48504164-48504183 | None:intergenic | 45.0% | |
| GATGGTGTTTGAACTGATGC+TGG | + | chr2_3:48504435-48504454 | None:intergenic | 45.0% | |
| ACACCATCATCTGATGGAAG+GGG | - | chr2_3:48504447-48504466 | Msa0295790:CDS | 45.0% | |
| GTTCCGTCTTCCTATTATCC+TGG | - | chr2_3:48504582-48504601 | Msa0295790:intron | 45.0% | |
| ATATGCAATGGCCTCCAAAC+GGG | - | chr2_3:48504607-48504626 | Msa0295790:intron | 45.0% | |
| AGCATGGAAAGAAGTCGTCA+AGG | - | chr2_3:48504811-48504830 | Msa0295790:intron | 45.0% | |
| TCCAATGGAGACGGAGAAAA+AGG | - | chr2_3:48504867-48504886 | Msa0295790:intron | 45.0% | |
| ! | ACCTTTTTCTCCGTCTCCAT+TGG | + | chr2_3:48504871-48504890 | None:intergenic | 45.0% |
| TGAAGGGAGTTTGTCGAATG+AGG | - | chr2_3:48504899-48504918 | Msa0295790:CDS | 45.0% | |
| !! | CAAGGAATGCTGATTCCAAC+GGG | - | chr2_3:48505057-48505076 | Msa0295790:CDS | 45.0% |
| ! | TTTTAGTGACGTCTGCTTCG+TGG | + | chr2_3:48505238-48505257 | None:intergenic | 45.0% |
| TTCCCTCTCTGCCACAATAA+AGG | + | chr2_3:48505282-48505301 | None:intergenic | 45.0% | |
| TATTGTGGCAGAGAGGGAAT+TGG | - | chr2_3:48505283-48505302 | Msa0295790:CDS | 45.0% | |
| AGAGAGGGAATTGGACAGTA+AGG | - | chr2_3:48505292-48505311 | Msa0295790:CDS | 45.0% | |
| GAGAGGGAATTGGACAGTAA+GGG | - | chr2_3:48505293-48505312 | Msa0295790:CDS | 45.0% | |
| CATGATTCAAGCTCGACCAT+TGG | - | chr2_3:48505508-48505527 | Msa0295790:CDS | 45.0% | |
| ! | ATCTGGCTCGTGGGAAATTA+AGG | + | chr2_3:48505645-48505664 | None:intergenic | 45.0% |
| AGAACCATGAGGAGATCATC+TGG | + | chr2_3:48505662-48505681 | None:intergenic | 45.0% | |
| AATCACGATCGAGAACCATG+AGG | + | chr2_3:48505673-48505692 | None:intergenic | 45.0% | |
| AGCACCTTGGAGAATGGAAA+TGG | - | chr2_3:48505712-48505731 | Msa0295790:intron | 45.0% | |
| !! | GGCGCCGATAAGAAAAATAC+TGG | - | chr2_3:48505821-48505840 | Msa0295790:CDS | 45.0% |
| !! | AGAAGTGCCTTGAAGAAGAC+TGG | - | chr2_3:48506187-48506206 | Msa0295790:intron | 45.0% |
| AACCTTCTGCTGAGTTACTC+GGG | + | chr2_3:48506341-48506360 | None:intergenic | 45.0% | |
| TTCAAGGAAGGCTTCTTGGT+TGG | + | chr2_3:48506388-48506407 | None:intergenic | 45.0% | |
| AACCAAGAAGCCTTCCTTGA+AGG | - | chr2_3:48506387-48506406 | Msa0295790:intron | 45.0% | |
| GCCTTCCTTGAAGGCAAATA+AGG | - | chr2_3:48506396-48506415 | Msa0295790:intron | 45.0% | |
| !! | TGGAGCTGTTTCTTCTGCAA+AGG | + | chr2_3:48506424-48506443 | None:intergenic | 45.0% |
| TCTGTTGCATCAGGTTTGAC+AGG | + | chr2_3:48506559-48506578 | None:intergenic | 45.0% | |
| TCAACAGCTTCTGTTGCATC+AGG | + | chr2_3:48506568-48506587 | None:intergenic | 45.0% | |
| ATGTTTATCTGGCGATGCCT+TGG | + | chr2_3:48506635-48506654 | None:intergenic | 45.0% | |
| AAATATCGGCCAACTTCGCA+CGG | - | chr2_3:48506693-48506712 | Msa0295790:intron | 45.0% | |
| AAGGAGCTGAAGAACCTTTG+TGG | - | chr2_3:48507086-48507105 | Msa0295790:five_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTTATCTTT+TGG | - | chr2_3:48502471-48502490 | Msa0295790:CDS | 5.0% |
| ATGTGTTGGGTGTGGTTAGG+AGG | + | chr2_3:48501823-48501842 | None:intergenic | 50.0% | |
| !! | AAGGTGGCTTTGGTGAACCA+TGG | + | chr2_3:48502439-48502458 | None:intergenic | 50.0% |
| TCACCAAAGCCACCTTGCAA+AGG | - | chr2_3:48502443-48502462 | Msa0295790:CDS | 50.0% | |
| TCCGCCCTGGTAACTAAAAG+AGG | + | chr2_3:48502745-48502764 | None:intergenic | 50.0% | |
| TTAGTTACCAGGGCGGATCA+AGG | - | chr2_3:48502748-48502767 | Msa0295790:CDS | 50.0% | |
| ATTCCTCCACGTTTACCACG+AGG | + | chr2_3:48503171-48503190 | None:intergenic | 50.0% | |
| CATGCTTCCCTACACATGAC+AGG | + | chr2_3:48503767-48503786 | None:intergenic | 50.0% | |
| CTTGCAGGTGAAGATGACTC+GGG | - | chr2_3:48503908-48503927 | Msa0295790:CDS | 50.0% | |
| GGCCAATGTCGAAACTTGCA+TGG | + | chr2_3:48503985-48504004 | None:intergenic | 50.0% | |
| GCAAGTTTCGACATTGGCCA+AGG | - | chr2_3:48503986-48504005 | Msa0295790:CDS | 50.0% | |
| !! | GGTCGAGTGCAAAAGCATCA+TGG | + | chr2_3:48504143-48504162 | None:intergenic | 50.0% |
| ATACGTCTTCGACTGCACAG+CGG | - | chr2_3:48504171-48504190 | Msa0295790:CDS | 50.0% | |
| CAACAAACGCCTCCATACCA+AGG | - | chr2_3:48504537-48504556 | Msa0295790:intron | 50.0% | |
| TATGCAATGGCCTCCAAACG+GGG | - | chr2_3:48504608-48504627 | Msa0295790:intron | 50.0% | |
| ATTTCAGAGCGATCCCCGTT+TGG | + | chr2_3:48504624-48504643 | None:intergenic | 50.0% | |
| !! | AAACGGGGATCGCTCTGAAA+TGG | - | chr2_3:48504623-48504642 | Msa0295790:intron | 50.0% |
| CGTCTTCGCAACAAGAAGCA+TGG | - | chr2_3:48504795-48504814 | Msa0295790:intron | 50.0% | |
| ! | GCTGATTCCAACGGGCAAAA+AGG | - | chr2_3:48505065-48505084 | Msa0295790:CDS | 50.0% |
| GGTGCGGCTGAATTCACAAA+CGG | - | chr2_3:48505587-48505606 | Msa0295790:intron | 50.0% | |
| TACAGCAGAATGCAGCACCT+TGG | - | chr2_3:48505699-48505718 | Msa0295790:intron | 50.0% | |
| GAATGCAGCACCTTGGAGAA+TGG | - | chr2_3:48505706-48505725 | Msa0295790:intron | 50.0% | |
| ! | ATGGTGGAACTCCTAAGGAC+TGG | + | chr2_3:48506301-48506320 | None:intergenic | 50.0% |
| !! | GATCGATGGTGGAACTCCTA+AGG | + | chr2_3:48506306-48506325 | None:intergenic | 50.0% |
| TGCCTTCAAGGAAGGCTTCT+TGG | + | chr2_3:48506392-48506411 | None:intergenic | 50.0% | |
| ! | CTTCGTCTTTGTGCCACTCT+TGG | + | chr2_3:48506509-48506528 | None:intergenic | 50.0% |
| TTTGACAGGCAACACTACCG+AGG | + | chr2_3:48506545-48506564 | None:intergenic | 50.0% | |
| TGCATTGCTTGGTTACTCGG+CGG | + | chr2_3:48506973-48506992 | None:intergenic | 50.0% | |
| CTTCCTCGTGGTAAACGTGG+AGG | - | chr2_3:48503165-48503184 | Msa0295790:CDS | 55.0% | |
| ! | TGACCTTTTGACACGCCCCT+CGG | + | chr2_3:48503377-48503396 | None:intergenic | 55.0% |
| AGCAACTAAAGCACGGGCGT+AGG | + | chr2_3:48503602-48503621 | None:intergenic | 55.0% | |
| TACGCCCGTGCTTTAGTTGC+TGG | - | chr2_3:48503601-48503620 | Msa0295790:CDS | 55.0% | |
| GGATGAGATTGCAGCCATGC+AGG | - | chr2_3:48503838-48503857 | Msa0295790:CDS | 55.0% | |
| TGGCCCCTTCCATCAGATGA+TGG | + | chr2_3:48504453-48504472 | None:intergenic | 55.0% | |
| ! | TGATGGTTCGGCCATGACCT+CGG | + | chr2_3:48504480-48504499 | None:intergenic | 55.0% |
| GAAGACGGAACCTGCATACC+AGG | + | chr2_3:48504573-48504592 | None:intergenic | 55.0% | |
| GGAGGCCATTGCATATTCCC+AGG | + | chr2_3:48504603-48504622 | None:intergenic | 55.0% | |
| AGAGGAAGCTGTTGCGTCAC+TGG | - | chr2_3:48504959-48504978 | Msa0295790:CDS | 55.0% | |
| TAGTGACGTCTGCTTCGTGG+TGG | + | chr2_3:48505235-48505254 | None:intergenic | 55.0% | |
| GGTTTCAGACGTTGTCGGTG+CGG | - | chr2_3:48505571-48505590 | Msa0295790:intron | 55.0% | |
| ! | GAGGAGATCATCTGGCTCGT+GGG | + | chr2_3:48505654-48505673 | None:intergenic | 55.0% |
| ! | TGAGGAGATCATCTGGCTCG+TGG | + | chr2_3:48505655-48505674 | None:intergenic | 55.0% |
| CGAGCCAGATGATCTCCTCA+TGG | - | chr2_3:48505655-48505674 | Msa0295790:intron | 55.0% | |
| GTAGAACATTGCCGGGAAGC+AGG | - | chr2_3:48505930-48505949 | Msa0295790:intron | 55.0% | |
| GTAGCTGTAGACCTGCTTCC+CGG | + | chr2_3:48505944-48505963 | None:intergenic | 55.0% | |
| AGTTGCAAGGCGATCGATGG+TGG | + | chr2_3:48506317-48506336 | None:intergenic | 55.0% | |
| GAGTTACTCGGGCAGTTGCA+AGG | + | chr2_3:48506330-48506349 | None:intergenic | 55.0% | |
| TGCCCGAGTAACTCAGCAGA+AGG | - | chr2_3:48506336-48506355 | Msa0295790:intron | 55.0% | |
| !! | AGACACTGGAGTGCTGACCA+AGG | - | chr2_3:48506615-48506634 | Msa0295790:intron | 55.0% |
| AAGACGAGTCCGTGCGAAGT+TGG | + | chr2_3:48506705-48506724 | None:intergenic | 55.0% | |
| ATTGCTTGGTTACTCGGCGG+AGG | + | chr2_3:48506970-48506989 | None:intergenic | 55.0% | |
| ! | ATGCCGAGGGGCGTGTCAAA+AGG | - | chr2_3:48503371-48503390 | Msa0295790:CDS | 60.0% |
| GGGTTGCGAAGACACCTGCA+TGG | + | chr2_3:48503855-48503874 | None:intergenic | 60.0% | |
| ATGGAAGGGGCCAAATGCCG+AGG | - | chr2_3:48504460-48504479 | Msa0295790:CDS | 60.0% | |
| TCGGCCATGACCTCGGCATT+TGG | + | chr2_3:48504473-48504492 | None:intergenic | 60.0% | |
| TCAGAGCGATCCCCGTTTGG+AGG | + | chr2_3:48504621-48504640 | None:intergenic | 60.0% | |
| GGCAGTTGCAAGGCGATCGA+TGG | + | chr2_3:48506320-48506339 | None:intergenic | 60.0% | |
| GGGGCCAAATGCCGAGGTCA+TGG | - | chr2_3:48504466-48504485 | Msa0295790:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48501763 | 48507140 | 48501763 | ID=Msa0295790;Name=Msa0295790 |
| chr2_3 | mRNA | 48501763 | 48507140 | 48501763 | ID=Msa0295790-mRNA-1;Parent=Msa0295790;Name=Msa0295790-mRNA-1;_AED=0.12;_eAED=0.12;_QI=385|1|1|1|1|1|8|45|1111 |
| chr2_3 | exon | 48501763 | 48502779 | 48501763 | ID=Msa0295790-mRNA-1:exon:15252;Parent=Msa0295790-mRNA-1 |
| chr2_3 | exon | 48502921 | 48504482 | 48502921 | ID=Msa0295790-mRNA-1:exon:15251;Parent=Msa0295790-mRNA-1 |
| chr2_3 | exon | 48504896 | 48505125 | 48504896 | ID=Msa0295790-mRNA-1:exon:15250;Parent=Msa0295790-mRNA-1 |
| chr2_3 | exon | 48505214 | 48505366 | 48505214 | ID=Msa0295790-mRNA-1:exon:15249;Parent=Msa0295790-mRNA-1 |
| chr2_3 | exon | 48505466 | 48505544 | 48505466 | ID=Msa0295790-mRNA-1:exon:15248;Parent=Msa0295790-mRNA-1 |
| chr2_3 | exon | 48505809 | 48505912 | 48505809 | ID=Msa0295790-mRNA-1:exon:15247;Parent=Msa0295790-mRNA-1 |
| chr2_3 | exon | 48506439 | 48506615 | 48506439 | ID=Msa0295790-mRNA-1:exon:15246;Parent=Msa0295790-mRNA-1 |
| chr2_3 | exon | 48506697 | 48507140 | 48506697 | ID=Msa0295790-mRNA-1:exon:15245;Parent=Msa0295790-mRNA-1 |
| chr2_3 | five_prime_UTR | 48506756 | 48507140 | 48506756 | ID=Msa0295790-mRNA-1:five_prime_utr;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48506697 | 48506755 | 48506697 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48506439 | 48506615 | 48506439 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48505809 | 48505912 | 48505809 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48505466 | 48505544 | 48505466 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48505214 | 48505366 | 48505214 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48504896 | 48505125 | 48504896 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48502921 | 48504482 | 48502921 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | CDS | 48501808 | 48502779 | 48501808 | ID=Msa0295790-mRNA-1:cds;Parent=Msa0295790-mRNA-1 |
| chr2_3 | three_prime_UTR | 48501763 | 48501807 | 48501763 | ID=Msa0295790-mRNA-1:three_prime_utr;Parent=Msa0295790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
