AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0334220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334220 MtrunA17_Chr2g0318031 91.324 1118 67 4 1 1111 1 1095 0.0 2046
Msa0334220 MtrunA17_Chr2g0281781 36.130 894 452 26 1 817 1 852 8.48e-139 441
Msa0334220 MtrunA17_Chr1g0187491 31.839 892 438 40 1 812 1 802 2.49e-73 266
Msa0334220 MtrunA17_Chr1g0166471 32.241 580 263 21 1 527 1 503 8.40e-62 230
Msa0334220 MtrunA17_Chr8g0344661 33.636 220 131 3 1 213 1 212 1.50e-30 130
Msa0334220 MtrunA17_Chr3g0128441 31.863 204 123 5 7 207 11 201 8.62e-19 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334220 AT4G27430.1 39.061 1193 508 36 1 1110 1 1057 0.0 612
Msa0334220 AT4G27430.2 39.061 1193 508 36 1 1110 1 1057 0.0 612
Msa0334220 AT1G61100.1 37.201 879 392 34 1 813 1 785 3.24e-129 414
Msa0334220 AT1G61100.2 37.244 878 392 34 1 813 1 784 3.66e-129 414
Msa0334220 AT5G43310.5 31.178 866 396 30 1 811 1 721 4.21e-75 270
Msa0334220 AT5G43310.4 31.530 869 389 31 1 811 1 721 6.12e-75 271
Msa0334220 AT5G43310.3 31.530 869 389 31 1 811 1 721 6.12e-75 271
Msa0334220 AT5G43310.2 31.646 869 388 32 1 811 1 721 6.20e-75 271
Msa0334220 AT3G14172.1 42.180 211 109 4 1 206 1 203 6.56e-41 165
Msa0334220 AT5G43310.1 63.810 105 37 1 1 104 1 105 9.96e-37 151
Msa0334220 AT5G43310.1 28.023 703 336 27 134 811 221 778 1.04e-31 135
Msa0334220 AT3G14172.2 39.336 211 107 5 1 206 1 195 1.53e-34 144
Msa0334220 AT1G17360.1 35.266 207 113 3 1 204 1 189 1.53e-31 134
Msa0334220 AT1G72410.1 30.882 204 133 1 1 204 1 196 3.92e-26 117
Msa0334220 AT1G72410.2 30.882 204 133 1 1 204 1 196 4.29e-26 117
Msa0334220 AT3G14172.3 38.272 162 87 4 50 206 12 165 1.56e-21 102

Find 267 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTGGATTGATACTTTA+TGG 0.098726 2_4:+52496819 Msa0334220:three_prime_UTR
GTTGAAAGCTCAAACTTTAA+AGG 0.136507 2_4:-52491799 None:intergenic
CCCGTTTGTTTATCTTTAAT+TGG 0.187242 2_4:+52497281 Msa0334220:three_prime_UTR
AGACATATACACATGTATTT+TGG 0.197619 2_4:-52491611 None:intergenic
TTCACAGCAGTATGTATTAA+TGG 0.204043 2_4:-52496589 None:intergenic
TTCCGTAAGCTTATCTTCTT+TGG 0.222118 2_4:+52496778 Msa0334220:CDS
GTTTCTTTGAGTAGTAATTT+TGG 0.232782 2_4:+52497217 Msa0334220:three_prime_UTR
ATTTGTTTCGCTGACGCTTT+TGG 0.238140 2_4:+52493367 Msa0334220:CDS
CCATTAGATGGATGAATCTT+AGG 0.239929 2_4:-52495971 None:intergenic
AAAACAGCCAATGAAATTTC+AGG 0.242138 2_4:+52494875 Msa0334220:CDS
AAGATAAACAAACGGGAAAA+TGG 0.263285 2_4:-52497274 None:intergenic
ACCCAACACATTCTTAGATT+TGG 0.267760 2_4:+52491530 Msa0334220:five_prime_UTR
TGCCTTCAAGGAAGGCTTCT+TGG 0.271743 2_4:-52496107 None:intergenic
GCCTTCCTTGAAGGCAAATA+AGG 0.273580 2_4:+52496114 Msa0334220:CDS
ATCTGGCTCGTGGGAAATTA+AGG 0.277127 2_4:-52495360 None:intergenic
TACGCCCGTGCTTTAGTTGC+TGG 0.279322 2_4:+52493316 Msa0334220:CDS
TTCTTAGTCTCTCCATTAGA+TGG 0.291797 2_4:-52495983 None:intergenic
ATTTGAATCTCTGAGACTTT+AGG 0.296960 2_4:-52496655 None:intergenic
CTTCTTCAAGGCACTTCTTT+CGG 0.299554 2_4:-52495900 None:intergenic
CTCTTCATTTCCATCTTGAT+TGG 0.310670 2_4:-52493122 None:intergenic
TTCATTGAATTGAATTGAAT+TGG 0.310924 2_4:+52491561 Msa0334220:five_prime_UTR
TATAGATTGTAGATGAAGTT+TGG 0.313339 2_4:+52491769 Msa0334220:five_prime_UTR
CGTCTCTCAAAAGAAGATTC+TGG 0.317168 2_4:-52494827 None:intergenic
TCCAATGGAGACGGAGAAAA+AGG 0.318786 2_4:+52494585 Msa0334220:CDS
TTGCATATTCCCAGGATAAT+AGG 0.319408 2_4:-52494310 None:intergenic
TCGGCCATGACCTCGGCATT+TGG 0.324562 2_4:-52494188 None:intergenic
TCACCTAATCAAGCAAATTC+AGG 0.324869 2_4:+52496079 Msa0334220:CDS
ATAAGATCATCCATGGATTC+TGG 0.325372 2_4:-52493346 None:intergenic
TTCTGTTCCAGTCTTCTTCA+AGG 0.325703 2_4:-52495912 None:intergenic
GACAAGTTATCTTCACTTCA+TGG 0.327367 2_4:+52496499 Msa0334220:CDS
AGTTAACAAGAACGTGAAAA+TGG 0.327689 2_4:+52491494 Msa0334220:five_prime_UTR
TTCCCTCTCTGCCACAATAA+AGG 0.329132 2_4:-52494997 None:intergenic
CACATTATGTTCTGTTGGAT+TGG 0.330308 2_4:+52491672 Msa0334220:five_prime_UTR
AAAAGAACCTTGTTCTTGTT+GGG 0.335784 2_4:-52491884 None:intergenic
TTCCTCTACCTTGTGTTTCA+AGG 0.346357 2_4:-52494661 None:intergenic
AAACCTTTGCAAGGTGGCTT+TGG 0.347703 2_4:-52492138 None:intergenic
GCTGATTCCAACGGGCAAAA+AGG 0.348123 2_4:+52494783 Msa0334220:CDS
GTATGTATTAATGGTTTGTT+AGG 0.350436 2_4:-52496580 None:intergenic
TCTTGACATGACATCAGATT+TGG 0.351205 2_4:-52495624 None:intergenic
AAGCACCATGACATGCTAAA+TGG 0.353658 2_4:+52494750 Msa0334220:CDS
TATTCTTCCTGAAATTTCAT+TGG 0.354187 2_4:-52494882 None:intergenic
TCTTGCATTGCTTGGTTACT+CGG 0.358323 2_4:-52496691 None:intergenic
GACTCGGGAAGTAAAATAAA+TGG 0.359638 2_4:+52493638 Msa0334220:CDS
CCTAAGATTCATCCATCTAA+TGG 0.363387 2_4:+52495971 Msa0334220:CDS
ATGTTATATAGTTTATATTA+CGG 0.368238 2_4:-52494563 None:intergenic
GATGATTCTACTCATGATAT+AGG 0.370285 2_4:+52494852 Msa0334220:CDS
GTTCCGTCTTCCTATTATCC+TGG 0.375217 2_4:+52494300 Msa0334220:CDS
ATTAGATACAAGATTTCTTT+CGG 0.377858 2_4:-52495510 None:intergenic
TAAAAGAACCTTGTTCTTGT+TGG 0.382023 2_4:-52491885 None:intergenic
AACAGCTTCTGATATCAGTT+TGG 0.382114 2_4:+52495268 Msa0334220:CDS
ACATCTGGAATCATACTTGC+AGG 0.382829 2_4:+52493608 Msa0334220:CDS
TTAGCTCAGTAGAAAGTGTT+TGG 0.387308 2_4:+52496949 Msa0334220:three_prime_UTR
GGACCTGAATTTGCTTGATT+AGG 0.392454 2_4:-52496082 None:intergenic
TTGCCTTACTTAAGGACATC+TGG 0.394849 2_4:+52493593 Msa0334220:CDS
CAATCCACAACAGGAAGAAA+TGG 0.395001 2_4:+52496716 Msa0334220:CDS
AACCCGTATTGCCTTACTTA+AGG 0.395294 2_4:+52493585 Msa0334220:CDS
GTCAAGAAGTAGAACATTGC+CGG 0.397855 2_4:+52495640 Msa0334220:CDS
AAACAAGAAATCTCAGGTAT+TGG 0.398657 2_4:+52494389 Msa0334220:CDS
TGTGAATTCAAAGGTGAATC+AGG 0.398868 2_4:+52496606 Msa0334220:CDS
GAAGATGTGCATAAAACAAA+AGG 0.403544 2_4:+52496190 Msa0334220:CDS
AAACGGGGATCGCTCTGAAA+TGG 0.412282 2_4:+52494341 Msa0334220:CDS
CTTAGTCTTTGCGCTACTCT+TGG 0.413113 2_4:-52496224 None:intergenic
AGAGGAAGCTGTTGCGTCAC+TGG 0.413854 2_4:+52494677 Msa0334220:CDS
ATACTCTTTCACAATGTTCA+AGG 0.414471 2_4:+52497192 Msa0334220:three_prime_UTR
AGGTACCTTATTTGCCTTCA+AGG 0.415479 2_4:-52496119 None:intergenic
AACCAAGAAGCCTTCCTTGA+AGG 0.415998 2_4:+52496105 Msa0334220:CDS
CATGGAGCATATGTAGATTC+AGG 0.421322 2_4:-52492110 None:intergenic
AGTCAATCAAATGAAGTAGA+AGG 0.423120 2_4:+52492788 Msa0334220:CDS
TATTGTGGCAGAGAGGGAAT+TGG 0.425986 2_4:+52495001 Msa0334220:CDS
TTCAAGGAAGGCTTCTTGGT+TGG 0.426938 2_4:-52496103 None:intergenic
ACTAACACATTATGTTCTGT+TGG 0.430919 2_4:+52491667 Msa0334220:five_prime_UTR
ATCTCAGAGAAATGATGAAT+CGG 0.432098 2_4:+52495121 Msa0334220:CDS
CTTTGACTTCAGCAAGGAAA+GGG 0.432104 2_4:+52495945 Msa0334220:CDS
TTATCCATTTCTTCCTGTTG+TGG 0.432151 2_4:-52496720 None:intergenic
AACCTAAAGCAAAACTCTCT+TGG 0.434391 2_4:+52491465 Msa0334220:five_prime_UTR
GTTAATGAAAGACTAGCTTC+TGG 0.438563 2_4:+52492008 Msa0334220:CDS
TGTGACTTGATGATTGTTGC+TGG 0.439597 2_4:+52491981 Msa0334220:CDS
AGCTTATCTTCTTTGGAAGA+AGG 0.440902 2_4:+52496785 Msa0334220:CDS
ATATGCAATGGCCTCCAAAC+GGG 0.441469 2_4:+52494325 Msa0334220:CDS
ACCAATTAAAGATAAACAAA+CGG 0.442296 2_4:-52497282 None:intergenic
AAGGAGATTGTGCAGATTGA+AGG 0.443294 2_4:+52492761 Msa0334220:CDS
ATTTCAGAGCGATCCCCGTT+TGG 0.446504 2_4:-52494339 None:intergenic
TTCATTTCCATCTTGATTGG+AGG 0.446898 2_4:-52493119 None:intergenic
GTTCTCTTTATCCATGCTCT+TGG 0.448044 2_4:+52496887 Msa0334220:three_prime_UTR
GTAGCTGTAGACCTGCTTCC+CGG 0.454447 2_4:-52495659 None:intergenic
TGGAGCTGTTTCTTCAGTAA+AGG 0.456678 2_4:-52496139 None:intergenic
AAGGAGCTGAAGAACCTTTG+TGG 0.456794 2_4:+52496804 Msa0334220:exon
GATTGATACTTTATGGCAAA+GGG 0.458043 2_4:+52496826 Msa0334220:three_prime_UTR
CATGGAAAATGTATTATACT+TGG 0.458214 2_4:-52497117 None:intergenic
CATGATTCAAGCTCGACCAT+TGG 0.463014 2_4:+52495226 Msa0334220:CDS
GAACAAAACAACAACAATCA+TGG 0.467082 2_4:+52496304 Msa0334220:CDS
TCCAAATCTAAGAATGTGTT+GGG 0.471893 2_4:-52491531 None:intergenic
ATGCCGAGGGGCGTGTCAAA+AGG 0.472016 2_4:+52493086 Msa0334220:CDS
TGCAAGAATCAATCCACAAC+AGG 0.472379 2_4:+52496707 Msa0334220:CDS
AAGAATAAGACCATGTGGAT+TGG 0.472669 2_4:+52497068 Msa0334220:three_prime_UTR
TTTGTGGCATCAGGTTTGAC+AGG 0.473208 2_4:-52496274 None:intergenic
ATTCCAGATGTCCTTAAGTA+AGG 0.474368 2_4:-52493596 None:intergenic
GGATTGATTCTTGCATTGCT+TGG 0.475211 2_4:-52496699 None:intergenic
AGAGAGGGAATTGGACAGTA+AGG 0.477932 2_4:+52495010 Msa0334220:CDS
GGGGCCAAATGCCGAGGTCA+TGG 0.478199 2_4:+52494184 Msa0334220:CDS
TAAGAATGAAATCAAGGCTT+CGG 0.478582 2_4:+52496243 Msa0334220:CDS
ACAAACCTCTCTATAACTTC+TGG 0.480450 2_4:-52492728 None:intergenic
AAACCTTCTGCTGAGTTACT+CGG 0.483075 2_4:-52496057 None:intergenic
TACCAGGATACATGTATCCT+TGG 0.483817 2_4:-52494272 None:intergenic
GATTGTCTAGAACACGTTGA+AGG 0.488204 2_4:-52493258 None:intergenic
TGTCCTTAAGTAAGGCAATA+CGG 0.488371 2_4:-52493588 None:intergenic
GAGGTTTGTGACCATAGAAA+AGG 0.488541 2_4:+52492742 Msa0334220:CDS
GTAGAACATTGCCGGGAAGC+AGG 0.488759 2_4:+52495648 Msa0334220:CDS
AAAATACTGGAGCGAAATCT+GGG 0.489271 2_4:+52495552 Msa0334220:CDS
AAATATCTTGAATGTTTCTC+CGG 0.489326 2_4:-52496361 None:intergenic
CAAGGAATGCTGATTCCAAC+GGG 0.490459 2_4:+52494775 Msa0334220:CDS
TTCCGTCTTCCTATTATCCT+GGG 0.490463 2_4:+52494301 Msa0334220:CDS
AGAACCATGAGGAGATCATC+TGG 0.490562 2_4:-52495377 None:intergenic
AATCATGGTTTGAAAGACAT+TGG 0.490701 2_4:+52496319 Msa0334220:CDS
GTCCTTAAGTAAGGCAATAC+GGG 0.490751 2_4:-52493587 None:intergenic
TTCCAAAGAAGATAAGCTTA+CGG 0.490831 2_4:-52496780 None:intergenic
ATCCAAATCTAAGAATGTGT+TGG 0.495526 2_4:-52491532 None:intergenic
AGAAGTGCCTTGAAGAAGAC+TGG 0.497341 2_4:+52495905 Msa0334220:CDS
GCAAAAGATCAGATTTCAAA+AGG 0.497438 2_4:+52492065 Msa0334220:CDS
CCAATTAAAGATAAACAAAC+GGG 0.497703 2_4:-52497281 None:intergenic
TACGAAGAGCAAATCGGAAA+AGG 0.497817 2_4:+52495679 Msa0334220:CDS
TGGCCCCTTCCATCAGATGA+TGG 0.498715 2_4:-52494168 None:intergenic
GAATGCAGCACCTTGGAGAA+TGG 0.498807 2_4:+52495424 Msa0334220:CDS
AGAATGTGTTGGGTGTGGTT+AGG 0.499088 2_4:-52491521 None:intergenic
ACCTTATTTGCCTTCAAGGA+AGG 0.500268 2_4:-52496115 None:intergenic
TGGGAAAATTTCAAGTAAAG+AGG 0.504134 2_4:+52495571 Msa0334220:CDS
GGAGGCCATTGCATATTCCC+AGG 0.511743 2_4:-52494318 None:intergenic
TTCAAATGATTCCTTTATTG+TGG 0.513484 2_4:+52494986 Msa0334220:CDS
AGCACCTTGGAGAATGGAAA+TGG 0.515394 2_4:+52495430 Msa0334220:CDS
GGATTGATACTTTATGGCAA+AGG 0.515774 2_4:+52496825 Msa0334220:three_prime_UTR
TTGGCTATTCAATATTTCAA+AGG 0.516366 2_4:+52496906 Msa0334220:three_prime_UTR
GGCAGTTGCAAGGCGATCGA+TGG 0.516940 2_4:-52496035 None:intergenic
ATGACATGCTAAATGGTTCA+AGG 0.520262 2_4:+52494757 Msa0334220:CDS
AACTGAACAAACCAGTCCTT+AGG 0.520450 2_4:+52496005 Msa0334220:CDS
TTGGAATTGCTATCATACTA+AGG 0.521184 2_4:+52497087 Msa0334220:three_prime_UTR
ATGTCGAAACTTGCATGGCT+TGG 0.522390 2_4:-52493692 None:intergenic
AATATGCAATGGCCTCCAAA+CGG 0.523303 2_4:+52494324 Msa0334220:CDS
TTAATGAAAGACTAGCTTCT+GGG 0.524068 2_4:+52492009 Msa0334220:CDS
ATGTACTGTGGATGATGGTT+CGG 0.526195 2_4:-52494207 None:intergenic
TTCCTTTATTGTGGCAGAGA+GGG 0.526445 2_4:+52494995 Msa0334220:CDS
ATGAGCAAGAAGTTTGAGAA+TGG 0.527708 2_4:+52494909 Msa0334220:CDS
AAGACGAGTCCGTGCGAAGT+TGG 0.528627 2_4:-52496420 None:intergenic
TTCACAAACGGTACACAAGA+AGG 0.529595 2_4:+52495317 Msa0334220:CDS
TCTTTGACTTCAGCAAGGAA+AGG 0.531447 2_4:+52495944 Msa0334220:CDS
TTGAACCATTTAGCATGTCA+TGG 0.531723 2_4:-52494755 None:intergenic
GGATACATGTATCCTTGGTA+TGG 0.531774 2_4:-52494267 None:intergenic
AAAGACTAAGAATGAAATCA+AGG 0.531926 2_4:+52496237 Msa0334220:CDS
GATCGATGGTGGAACTCCTA+AGG 0.533024 2_4:-52496021 None:intergenic
CAATACTCTAACTCTAGCTA+TGG 0.534070 2_4:+52491821 Msa0334220:exon
AATGAGGAAGAATTTATCAA+TGG 0.535620 2_4:+52494633 Msa0334220:CDS
ACTTTCTACTGAGCTAAGAA+TGG 0.537768 2_4:-52496943 None:intergenic
GAAGACGGAACCTGCATACC+AGG 0.538054 2_4:-52494288 None:intergenic
TCTCAGAGAAATGATGAATC+GGG 0.538579 2_4:+52495122 Msa0334220:CDS
TGAAGGGAGTTTGTCGAATG+AGG 0.539941 2_4:+52494617 Msa0334220:CDS
TACCAAGGATACATGTATCC+TGG 0.541094 2_4:+52494270 Msa0334220:CDS
ACTATTTCCTCCAATCAAGA+TGG 0.542190 2_4:+52493112 Msa0334220:CDS
ATACATGTATCCTGGTATGC+AGG 0.542557 2_4:+52494278 Msa0334220:CDS
AACACCATCATCTGATGGAA+GGG 0.544199 2_4:+52494164 Msa0334220:CDS
GGCCAATGTCGAAACTTGCA+TGG 0.544950 2_4:-52493697 None:intergenic
TACAGCTACGAAGAGCAAAT+CGG 0.545547 2_4:+52495673 Msa0334220:CDS
TCAGAGCGATCCCCGTTTGG+AGG 0.546490 2_4:-52494336 None:intergenic
ATAAACTATATAACATCCAA+TGG 0.548118 2_4:+52494570 Msa0334220:CDS
ATGTTTCTCCGGTGATGCCT+TGG 0.550614 2_4:-52496350 None:intergenic
TTCCTTGAAACACAAGGTAG+AGG 0.550703 2_4:+52494659 Msa0334220:CDS
GGATGAGATTGCAGCCATGC+AGG 0.550747 2_4:+52493553 Msa0334220:CDS
AAAGAACCTTGTTCTTGTTG+GGG 0.551905 2_4:-52491883 None:intergenic
AAGATGTGCATAAAACAAAA+GGG 0.552116 2_4:+52496191 Msa0334220:CDS
GCATGATCAAGATAAGAACT+TGG 0.553572 2_4:-52491846 None:intergenic
AGTGCTGACCAAGGCATCAC+CGG 0.554150 2_4:+52496342 Msa0334220:CDS
TCAAGAAGTAGAACATTGCC+GGG 0.554753 2_4:+52495641 Msa0334220:CDS
AACCTTCTGCTGAGTTACTC+GGG 0.555699 2_4:-52496056 None:intergenic
TACAGCAGAATGCAGCACCT+TGG 0.558825 2_4:+52495417 Msa0334220:CDS
GTTCAAACACCATCATCTGA+TGG 0.561192 2_4:+52494159 Msa0334220:CDS
GCAAGTTTCGACATTGGCCA+AGG 0.562257 2_4:+52493701 Msa0334220:CDS
GAATGAAGACAAGCTGTGGA+TGG 0.564189 2_4:+52493532 Msa0334220:CDS
ATTTACAATACAACAAAACA+TGG 0.566581 2_4:-52497135 None:intergenic
AGTTTGGTTTCAGACGTTGT+CGG 0.566700 2_4:+52495284 Msa0334220:CDS
TGATGGTTCGGCCATGACCT+CGG 0.567836 2_4:-52494195 None:intergenic
GAGTTACTCGGGCAGTTGCA+AGG 0.567913 2_4:-52496045 None:intergenic
TCAAGGAATGCTGATTCCAA+CGG 0.568811 2_4:+52494774 Msa0334220:CDS
AGCCATGCAAGTTTCGACAT+TGG 0.568946 2_4:+52493695 Msa0334220:CDS
ATTGCTTGGTTACTCGGCGG+AGG 0.570118 2_4:-52496685 None:intergenic
AGATAACAACAATTCCTCGC+TGG 0.570326 2_4:-52495102 None:intergenic
AATCTTGTATCTAATCATGA+AGG 0.570547 2_4:+52495518 Msa0334220:CDS
CGTGTTGAATATTTCAACGA+AGG 0.570645 2_4:+52495041 Msa0334220:CDS
TATTTCAACGAAGGGAAGGA+TGG 0.570660 2_4:+52495050 Msa0334220:CDS
AAACACCATCATCTGATGGA+AGG 0.571552 2_4:+52494163 Msa0334220:CDS
CATTTAAGGTGAGAAACAAA+CGG 0.571866 2_4:-52492041 None:intergenic
AAATCCAGCAACTAAAGCAC+GGG 0.574101 2_4:-52493320 None:intergenic
GATGGTGTTTGAACTGATGC+TGG 0.577297 2_4:-52494150 None:intergenic
CGTCTTCGCAACAAGAAGCA+TGG 0.577721 2_4:+52494513 Msa0334220:CDS
TTATCCATTTCCATTCTCCA+AGG 0.577841 2_4:-52495434 None:intergenic
ACTTGCAGGTGAAGATGACT+CGG 0.578585 2_4:+52493622 Msa0334220:CDS
CTGAATCTACATATGCTCCA+TGG 0.579695 2_4:+52492111 Msa0334220:CDS
GGGAAGTAAAATAAATGGCA+CGG 0.579736 2_4:+52493643 Msa0334220:CDS
AATTGCTATCATACTAAGGA+AGG 0.579969 2_4:+52497091 Msa0334220:three_prime_UTR
GAAACAAATAAGATCATCCA+TGG 0.580905 2_4:-52493353 None:intergenic
GGAAGTAAAATAAATGGCAC+GGG 0.582458 2_4:+52493644 Msa0334220:CDS
TCACCAAAGCCACCTTGCAA+AGG 0.584782 2_4:+52492135 Msa0334220:CDS
GAATTAAATTGATATTCCAA+TGG 0.585629 2_4:-52495242 None:intergenic
TACATGTATCCTTGGTATGG+AGG 0.585915 2_4:-52494264 None:intergenic
TGAATATTTCAACGAAGGGA+AGG 0.586689 2_4:+52495046 Msa0334220:CDS
AAAAGAATGAAGACAAGCTG+TGG 0.587370 2_4:+52493528 Msa0334220:CDS
ATGTGTTGGGTGTGGTTAGG+AGG 0.588238 2_4:-52491518 None:intergenic
GCAAGAAGTTTGAGAATGGA+AGG 0.588781 2_4:+52494913 Msa0334220:CDS
GACTCTTCAAAAGTAGCGAA+AGG 0.590628 2_4:+52496754 Msa0334220:CDS
GTGTTGAATATTTCAACGAA+GGG 0.597338 2_4:+52495042 Msa0334220:CDS
ATGGTGGAACTCCTAAGGAC+TGG 0.598531 2_4:-52496016 None:intergenic
AAAATCCAGCAACTAAAGCA+CGG 0.599026 2_4:-52493321 None:intergenic
ACATACTGCTGTGAATTCAA+AGG 0.601032 2_4:+52496597 Msa0334220:CDS
GAGAAGAGTTAATGATGCAG+CGG 0.601976 2_4:+52495864 Msa0334220:CDS
ATCTAAGAATGTGTTGGGTG+TGG 0.602955 2_4:-52491526 None:intergenic
AACTCACCCCAACAAGAACA+AGG 0.602994 2_4:+52491877 Msa0334220:CDS
TGCCCGAGTAACTCAGCAGA+AGG 0.603687 2_4:+52496054 Msa0334220:CDS
GGTGCGGCTGAATTCACAAA+CGG 0.605269 2_4:+52495305 Msa0334220:CDS
ACACCATCATCTGATGGAAG+GGG 0.607256 2_4:+52494165 Msa0334220:CDS
TGAGGAGATCATCTGGCTCG+TGG 0.608106 2_4:-52495370 None:intergenic
AGTTGCAAGGCGATCGATGG+TGG 0.608540 2_4:-52496032 None:intergenic
GAGGAGATCATCTGGCTCGT+GGG 0.610794 2_4:-52495369 None:intergenic
AGACTTCTTTGACTTCAGCA+AGG 0.611959 2_4:+52495939 Msa0334220:CDS
AGGAAATGTGTCATATGCCG+AGG 0.612975 2_4:+52493072 Msa0334220:intron
TGTGAATGTACTGTGGATGA+TGG 0.613203 2_4:-52494212 None:intergenic
CGAGCCAGATGATCTCCTCA+TGG 0.614234 2_4:+52495373 Msa0334220:CDS
GGTTTCAGACGTTGTCGGTG+CGG 0.614474 2_4:+52495289 Msa0334220:CDS
AAATATCAGCCAACTTCGCA+CGG 0.615028 2_4:+52496411 Msa0334220:CDS
AAAGATCAGATTTCAAAAGG+TGG 0.615886 2_4:+52492068 Msa0334220:CDS
GGAAATGTGTCATATGCCGA+GGG 0.617221 2_4:+52493073 Msa0334220:intron
ATTATCCTGGGAATATGCAA+TGG 0.619307 2_4:+52494313 Msa0334220:CDS
GCTTTGCAAAGAACAAGCAA+TGG 0.626293 2_4:+52493291 Msa0334220:CDS
TATGCAATGGCCTCCAAACG+GGG 0.626868 2_4:+52494326 Msa0334220:CDS
AGTCATGATCATGCATTGAG+AGG 0.627575 2_4:+52496448 Msa0334220:CDS
GAGAGGGAATTGGACAGTAA+GGG 0.627614 2_4:+52495011 Msa0334220:CDS
TATATAACATCCAATGGAGA+CGG 0.628010 2_4:+52494576 Msa0334220:CDS
TAGTGACGTCTGCTTCGTGG+TGG 0.628728 2_4:-52494950 None:intergenic
TTCCCAGGATAATAGGAAGA+CGG 0.630202 2_4:-52494303 None:intergenic
AGCAACTAAAGCACGGGCGT+AGG 0.633124 2_4:-52493314 None:intergenic
ATGGAAGGGGCCAAATGCCG+AGG 0.633588 2_4:+52494178 Msa0334220:CDS
TTGTTTCTTATGCTGACGAG+AGG 0.636767 2_4:-52494718 None:intergenic
ATGGAAATGAAGAGAACTCG+AGG 0.639282 2_4:+52493131 Msa0334220:CDS
AGATTCAGGACATAGAGTGA+TGG 0.644079 2_4:-52492096 None:intergenic
ATATTGAATAGCCAAGAGCA+TGG 0.644195 2_4:-52496898 None:intergenic
GACTTGATGATTGTTGCTGG+TGG 0.645522 2_4:+52491984 Msa0334220:CDS
ATCATGTCATTATTATGTCG+AGG 0.648211 2_4:-52496535 None:intergenic
AGCATGGAAAGAAGTCGTCA+AGG 0.649026 2_4:+52494529 Msa0334220:CDS
GAAGAAATGGATAAATGATG+AGG 0.650351 2_4:+52496729 Msa0334220:CDS
TGCATTGCTTGGTTACTCGG+CGG 0.650770 2_4:-52496688 None:intergenic
ATTCCTTTATTGTGGCAGAG+AGG 0.650977 2_4:+52494994 Msa0334220:CDS
TGGAAATTCCTTGAAACACA+AGG 0.651370 2_4:+52494653 Msa0334220:CDS
ACACACTCATTCATGTGACA+TGG 0.654348 2_4:+52496998 Msa0334220:three_prime_UTR
CAACAAACGCCTCCATACCA+AGG 0.657689 2_4:+52494255 Msa0334220:CDS
TGGAGTTGAATCAGAAACTG+AGG 0.660489 2_4:-52493672 None:intergenic
GCACTCCAGAAGTTATAGAG+AGG 0.660533 2_4:+52492723 Msa0334220:CDS
TGAAAATTGTGAATGTACTG+TGG 0.661098 2_4:-52494219 None:intergenic
GAAATGGATAAATGATGAGG+CGG 0.662867 2_4:+52496732 Msa0334220:CDS
AGACATTGGAGTGCTGACCA+AGG 0.667263 2_4:+52496333 Msa0334220:CDS
ATTATAAGAATAAGACCATG+TGG 0.668010 2_4:+52497063 Msa0334220:three_prime_UTR
CTTGCAGGTGAAGATGACTC+GGG 0.668791 2_4:+52493623 Msa0334220:CDS
CATAAAGTATCAATCCACAA+AGG 0.676451 2_4:-52496818 None:intergenic
ATTGATACTTTATGGCAAAG+GGG 0.676473 2_4:+52496827 Msa0334220:three_prime_UTR
GGGTTGCGAAGACACCTGCA+TGG 0.691437 2_4:-52493567 None:intergenic
AAGGTGGCTTTGGTGAACCA+TGG 0.696142 2_4:-52492128 None:intergenic
CATGTGACATGGTAATCATG+TGG 0.696431 2_4:+52497009 Msa0334220:three_prime_UTR
GATAGCAATTCCAATCCACA+TGG 0.699533 2_4:-52497078 None:intergenic
GACAAAGAAAATTACCAGCG+AGG 0.702798 2_4:+52495088 Msa0334220:CDS
ACAATCTATAATGCTTCACA+TGG 0.709087 2_4:-52491756 None:intergenic
AATCACGATCGAGAACCATG+AGG 0.748541 2_4:-52495388 None:intergenic
GAAATGTGTCATATGCCGAG+GGG 0.758314 2_4:+52493074 Msa0334220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATATATCATATAGTT+GGG + chr2_4:52493818-52493837 Msa0334220:intron 10.0%
!! ATGTTATATAGTTTATATTA+CGG - chr2_4:52494566-52494585 None:intergenic 10.0%
!! CAACTTTACAAAAATAAAAA+AGG + chr2_4:52491910-52491929 Msa0334220:intron 15.0%
!! AAACATAGATGAAAAATTAT+CGG - chr2_4:52493224-52493243 None:intergenic 15.0%
!! GATAAAATATATCATATAGT+TGG + chr2_4:52493817-52493836 Msa0334220:intron 15.0%
!! TTCCTATTAATTGAAAATAA+AGG - chr2_4:52495825-52495844 None:intergenic 15.0%
!! TTCATTGAATTGAATTGAAT+TGG + chr2_4:52491561-52491580 Msa0334220:five_prime_UTR 20.0%
!! AAAAAAAAAAAACCTTTGCA+AGG - chr2_4:52492150-52492169 None:intergenic 20.0%
!!! TTGGTTTTTGTAACAATTAT+TGG + chr2_4:52492186-52492205 Msa0334220:intron 20.0%
!!! ATTATTGGTTTTTGATAGAT+TGG + chr2_4:52492201-52492220 Msa0334220:intron 20.0%
!!! AAATATTTTCAATGATCTGA+TGG + chr2_4:52492320-52492339 Msa0334220:intron 20.0%
!!! TGTGTTGGTTTATTTTATAT+AGG + chr2_4:52492684-52492703 Msa0334220:intron 20.0%
!! TTAATTAAGAACAATGATGA+CGG - chr2_4:52492859-52492878 None:intergenic 20.0%
!!! TTTCATCTATGTTTTATTGT+AGG + chr2_4:52493230-52493249 Msa0334220:intron 20.0%
!!! TTCATCTATGTTTTATTGTA+GGG + chr2_4:52493231-52493250 Msa0334220:intron 20.0%
!!! AGAAAAATGTACTGTTTTAA+TGG - chr2_4:52493444-52493463 None:intergenic 20.0%
!!! GAAATGATTGTTCTTTTTTT+AGG - chr2_4:52493778-52493797 None:intergenic 20.0%
!! CTATACTTGAATTAATAGAA+AGG - chr2_4:52493920-52493939 None:intergenic 20.0%
!! CTTTCTATTAATTCAAGTAT+AGG + chr2_4:52493918-52493937 Msa0334220:intron 20.0%
!! ATAAACTATATAACATCCAA+TGG + chr2_4:52494570-52494589 Msa0334220:CDS 20.0%
!! GAATTAAATTGATATTCCAA+TGG - chr2_4:52495245-52495264 None:intergenic 20.0%
!! ATTAGATACAAGATTTCTTT+CGG - chr2_4:52495513-52495532 None:intergenic 20.0%
!! GAAAGCTATAGATAATATTA+AGG - chr2_4:52495761-52495780 None:intergenic 20.0%
!!! GACCTTTATTTTCAATTAAT+AGG + chr2_4:52495820-52495839 Msa0334220:intron 20.0%
!! ATTTACAATACAACAAAACA+TGG - chr2_4:52497138-52497157 None:intergenic 20.0%
!! ACCAATTAAAGATAAACAAA+CGG - chr2_4:52497285-52497304 None:intergenic 20.0%
!! AGACATATACACATGTATTT+TGG - chr2_4:52491614-52491633 None:intergenic 25.0%
!!! ATTTGCTGAGTTTTAAAAGT+GGG - chr2_4:52491699-52491718 None:intergenic 25.0%
!!! AATTTGCTGAGTTTTAAAAG+TGG - chr2_4:52491700-52491719 None:intergenic 25.0%
! TATAGATTGTAGATGAAGTT+TGG + chr2_4:52491769-52491788 Msa0334220:five_prime_UTR 25.0%
!!! AGGTTGTTTTTGTTTTTTGT+TGG + chr2_4:52491930-52491949 Msa0334220:intron 25.0%
! ATTGTAGTGGCAATATATAA+AGG - chr2_4:52492598-52492617 None:intergenic 25.0%
!!! ACCATAGTTTTAAATTGTAG+TGG - chr2_4:52492611-52492630 None:intergenic 25.0%
! TAATTAAGAACAATGATGAC+GGG - chr2_4:52492858-52492877 None:intergenic 25.0%
! TTAGCAAATAGTATCTTTGT+AGG + chr2_4:52493005-52493024 Msa0334220:intron 25.0%
! AACAATACTATGTGATTAAC+AGG + chr2_4:52493052-52493071 Msa0334220:intron 25.0%
! ATATCTAATTTACTGCTAAG+TGG - chr2_4:52494010-52494029 None:intergenic 25.0%
! ACAACTTAGATATCTTGTAA+AGG + chr2_4:52494075-52494094 Msa0334220:intron 25.0%
! CAACTTAGATATCTTGTAAA+GGG + chr2_4:52494076-52494095 Msa0334220:intron 25.0%
! AATGAGGAAGAATTTATCAA+TGG + chr2_4:52494633-52494652 Msa0334220:CDS 25.0%
! TATTCTTCCTGAAATTTCAT+TGG - chr2_4:52494885-52494904 None:intergenic 25.0%
! TTCAAATGATTCCTTTATTG+TGG + chr2_4:52494986-52495005 Msa0334220:CDS 25.0%
! AATCTTGTATCTAATCATGA+AGG + chr2_4:52495518-52495537 Msa0334220:CDS 25.0%
! AAGACAAAGTCACATATATA+TGG - chr2_4:52495737-52495756 None:intergenic 25.0%
!! TTGAAGATTTCACTTCTTTT+TGG - chr2_4:52496162-52496181 None:intergenic 25.0%
! AAGATGTGCATAAAACAAAA+GGG + chr2_4:52496191-52496210 Msa0334220:CDS 25.0%
! AAAGACTAAGAATGAAATCA+AGG + chr2_4:52496237-52496256 Msa0334220:CDS 25.0%
! AAATATCTTGAATGTTTCTC+CGG - chr2_4:52496364-52496383 None:intergenic 25.0%
!!! GTATGTATTAATGGTTTGTT+AGG - chr2_4:52496583-52496602 None:intergenic 25.0%
! TTGGCTATTCAATATTTCAA+AGG + chr2_4:52496906-52496925 Msa0334220:three_prime_UTR 25.0%
! ATTATAAGAATAAGACCATG+TGG + chr2_4:52497063-52497082 Msa0334220:three_prime_UTR 25.0%
! CATGGAAAATGTATTATACT+TGG - chr2_4:52497120-52497139 None:intergenic 25.0%
!! GTTTCTTTGAGTAGTAATTT+TGG + chr2_4:52497217-52497236 Msa0334220:three_prime_UTR 25.0%
! CCAATTAAAGATAAACAAAC+GGG - chr2_4:52497284-52497303 None:intergenic 25.0%
AGTTAACAAGAACGTGAAAA+TGG + chr2_4:52491494-52491513 Msa0334220:five_prime_UTR 30.0%
TCCAAATCTAAGAATGTGTT+GGG - chr2_4:52491534-52491553 None:intergenic 30.0%
ATCCAAATCTAAGAATGTGT+TGG - chr2_4:52491535-52491554 None:intergenic 30.0%
ACTAACACATTATGTTCTGT+TGG + chr2_4:52491667-52491686 Msa0334220:five_prime_UTR 30.0%
ACAATCTATAATGCTTCACA+TGG - chr2_4:52491759-52491778 None:intergenic 30.0%
GTTGAAAGCTCAAACTTTAA+AGG - chr2_4:52491802-52491821 None:intergenic 30.0%
AAAAGAACCTTGTTCTTGTT+GGG - chr2_4:52491887-52491906 None:intergenic 30.0%
TAAAAGAACCTTGTTCTTGT+TGG - chr2_4:52491888-52491907 None:intergenic 30.0%
!! TTAATGAAAGACTAGCTTCT+GGG + chr2_4:52492009-52492028 Msa0334220:CDS 30.0%
! CATTTAAGGTGAGAAACAAA+CGG - chr2_4:52492044-52492063 None:intergenic 30.0%
! TCTGATCTTTTGCACATTTA+AGG - chr2_4:52492058-52492077 None:intergenic 30.0%
GCAAAAGATCAGATTTCAAA+AGG + chr2_4:52492065-52492084 Msa0334220:CDS 30.0%
AAAGATCAGATTTCAAAAGG+TGG + chr2_4:52492068-52492087 Msa0334220:CDS 30.0%
AAAAAAAAACCTTTGCAAGG+TGG - chr2_4:52492147-52492166 None:intergenic 30.0%
! TGTGACTTTGGAAATAGTTA+TGG + chr2_4:52492289-52492308 Msa0334220:intron 30.0%
! CTACATTGAGAACATTTTCA+AGG - chr2_4:52492402-52492421 None:intergenic 30.0%
ACTAAAAGAGGATTAATCCT+TGG - chr2_4:52492448-52492467 None:intergenic 30.0%
!! TTAATCCTCTTTTAGTTACC+AGG + chr2_4:52492452-52492471 Msa0334220:intron 30.0%
!! TAATCCTCTTTTAGTTACCA+GGG + chr2_4:52492453-52492472 Msa0334220:intron 30.0%
! GCCACTACAATTTAAAACTA+TGG + chr2_4:52492607-52492626 Msa0334220:intron 30.0%
ACAATGATGTTTGTTTGTGT+TGG + chr2_4:52492669-52492688 Msa0334220:intron 30.0%
AGTCAATCAAATGAAGTAGA+AGG + chr2_4:52492788-52492807 Msa0334220:CDS 30.0%
ATCAAATGAAGTAGAAGGTA+TGG + chr2_4:52492793-52492812 Msa0334220:intron 30.0%
TTCTTAATTAAACTTCCTCG+TGG + chr2_4:52492868-52492887 Msa0334220:intron 30.0%
CAAAGATGTGTGCATATATA+AGG - chr2_4:52493172-52493191 None:intergenic 30.0%
GAAACAAATAAGATCATCCA+TGG - chr2_4:52493356-52493375 None:intergenic 30.0%
TATAATTTCCTGTCATGTGT+AGG + chr2_4:52493471-52493490 Msa0334220:intron 30.0%
ATAATTTCCTGTCATGTGTA+GGG + chr2_4:52493472-52493491 Msa0334220:intron 30.0%
!! TTTTAGGAACACTTTTACTC+AGG - chr2_4:52493762-52493781 None:intergenic 30.0%
TACAACTTGTGTCTAAATAC+TGG + chr2_4:52493951-52493970 Msa0334220:intron 30.0%
!!! CCAGTATTTTTTTTGAAGGA+TGG - chr2_4:52493982-52494001 None:intergenic 30.0%
CCATCCTTCAAAAAAAATAC+TGG + chr2_4:52493979-52493998 Msa0334220:intron 30.0%
!!! CAGTCCAGTATTTTTTTTGA+AGG - chr2_4:52493986-52494005 None:intergenic 30.0%
CAATAAGAGTAACAAACTTC+TGG - chr2_4:52494103-52494122 None:intergenic 30.0%
TGAAAATTGTGAATGTACTG+TGG - chr2_4:52494222-52494241 None:intergenic 30.0%
! ACAGTACATTCACAATTTTC+AGG + chr2_4:52494221-52494240 Msa0334220:CDS 30.0%
! CAGTACATTCACAATTTTCA+GGG + chr2_4:52494222-52494241 Msa0334220:CDS 30.0%
GAAGAAAAACAAGAAATCTC+AGG + chr2_4:52494383-52494402 Msa0334220:CDS 30.0%
AAACAAGAAATCTCAGGTAT+TGG + chr2_4:52494389-52494408 Msa0334220:CDS 30.0%
AAGCAAAAAGAACTCTTCAA+CGG + chr2_4:52494488-52494507 Msa0334220:CDS 30.0%
TATATAACATCCAATGGAGA+CGG + chr2_4:52494576-52494595 Msa0334220:CDS 30.0%
AAAAAGGTAGTATCACTGAA+GGG + chr2_4:52494601-52494620 Msa0334220:CDS 30.0%
GCAAAAAGGTAATAACAACT+GGG + chr2_4:52494797-52494816 Msa0334220:CDS 30.0%
GATGATTCTACTCATGATAT+AGG + chr2_4:52494852-52494871 Msa0334220:CDS 30.0%
AAAACAGCCAATGAAATTTC+AGG + chr2_4:52494875-52494894 Msa0334220:CDS 30.0%
GTGTTGAATATTTCAACGAA+GGG + chr2_4:52495042-52495061 Msa0334220:CDS 30.0%
ATCTCAGAGAAATGATGAAT+CGG + chr2_4:52495121-52495140 Msa0334220:CDS 30.0%
CGAAGCTAACAAAAAGATTT+CGG + chr2_4:52495478-52495497 Msa0334220:CDS 30.0%
! TGGGAAAATTTCAAGTAAAG+AGG + chr2_4:52495571-52495590 Msa0334220:CDS 30.0%
!!! GATTTGGTTTTAGATGCATT+TGG - chr2_4:52495611-52495630 None:intergenic 30.0%
GCTTTCATTTGCAAATTCAT+AGG + chr2_4:52495775-52495794 Msa0334220:intron 30.0%
GAAGATGTGCATAAAACAAA+AGG + chr2_4:52496190-52496209 Msa0334220:CDS 30.0%
TAAGAATGAAATCAAGGCTT+CGG + chr2_4:52496243-52496262 Msa0334220:CDS 30.0%
GAACAAAACAACAACAATCA+TGG + chr2_4:52496304-52496323 Msa0334220:CDS 30.0%
AATCATGGTTTGAAAGACAT+TGG + chr2_4:52496319-52496338 Msa0334220:CDS 30.0%
ATCATGTCATTATTATGTCG+AGG - chr2_4:52496538-52496557 None:intergenic 30.0%
TTCACAGCAGTATGTATTAA+TGG - chr2_4:52496592-52496611 None:intergenic 30.0%
!! ATTTGAATCTCTGAGACTTT+AGG - chr2_4:52496658-52496677 None:intergenic 30.0%
GAAGAAATGGATAAATGATG+AGG + chr2_4:52496729-52496748 Msa0334220:CDS 30.0%
TTCCAAAGAAGATAAGCTTA+CGG - chr2_4:52496783-52496802 None:intergenic 30.0%
! CATAAAGTATCAATCCACAA+AGG - chr2_4:52496821-52496840 None:intergenic 30.0%
! CTTTGTGGATTGATACTTTA+TGG + chr2_4:52496819-52496838 Msa0334220:three_prime_UTR 30.0%
GATTGATACTTTATGGCAAA+GGG + chr2_4:52496826-52496845 Msa0334220:three_prime_UTR 30.0%
ATTGATACTTTATGGCAAAG+GGG + chr2_4:52496827-52496846 Msa0334220:three_prime_UTR 30.0%
TTGGAATTGCTATCATACTA+AGG + chr2_4:52497087-52497106 Msa0334220:three_prime_UTR 30.0%
AATTGCTATCATACTAAGGA+AGG + chr2_4:52497091-52497110 Msa0334220:three_prime_UTR 30.0%
ATACTCTTTCACAATGTTCA+AGG + chr2_4:52497192-52497211 Msa0334220:three_prime_UTR 30.0%
AAGATAAACAAACGGGAAAA+TGG - chr2_4:52497277-52497296 None:intergenic 30.0%
CCCGTTTGTTTATCTTTAAT+TGG + chr2_4:52497281-52497300 Msa0334220:three_prime_UTR 30.0%
AACCTAAAGCAAAACTCTCT+TGG + chr2_4:52491465-52491484 Msa0334220:five_prime_UTR 35.0%
! ATCCAAGAGAGTTTTGCTTT+AGG - chr2_4:52491470-52491489 None:intergenic 35.0%
ACCCAACACATTCTTAGATT+TGG + chr2_4:52491530-52491549 Msa0334220:five_prime_UTR 35.0%
CACATTATGTTCTGTTGGAT+TGG + chr2_4:52491672-52491691 Msa0334220:five_prime_UTR 35.0%
CAATACTCTAACTCTAGCTA+TGG + chr2_4:52491821-52491840 Msa0334220:exon 35.0%
GCATGATCAAGATAAGAACT+TGG - chr2_4:52491849-52491868 None:intergenic 35.0%
AAAGAACCTTGTTCTTGTTG+GGG - chr2_4:52491886-52491905 None:intergenic 35.0%
!! GTTAATGAAAGACTAGCTTC+TGG + chr2_4:52492008-52492027 Msa0334220:CDS 35.0%
! ATGAGTTTTTGATCTCACCA+AGG + chr2_4:52492428-52492447 Msa0334220:intron 35.0%
!!! CGGATCAAGGTTTTAAATTG+CGG + chr2_4:52492476-52492495 Msa0334220:intron 35.0%
! AGCAACTTTTCACAATGTCA+AGG - chr2_4:52492520-52492539 None:intergenic 35.0%
ACAAACCTCTCTATAACTTC+TGG - chr2_4:52492731-52492750 None:intergenic 35.0%
! AATGAAGTAGAAGGTATGGA+TGG + chr2_4:52492797-52492816 Msa0334220:intron 35.0%
! ATGAAGTAGAAGGTATGGAT+GGG + chr2_4:52492798-52492817 Msa0334220:intron 35.0%
ATGGGATCTCATAATCATAC+TGG + chr2_4:52492816-52492835 Msa0334220:intron 35.0%
TCATAATCATACTGGTGTCT+CGG + chr2_4:52492824-52492843 Msa0334220:intron 35.0%
!! AACAATGATGACGGGAATAA+AGG - chr2_4:52492850-52492869 None:intergenic 35.0%
CAGATGTGGGAAAAAAATAG+TGG - chr2_4:52492925-52492944 None:intergenic 35.0%
GTAAAGCTTCCGTGTAAAAT+CGG - chr2_4:52492949-52492968 None:intergenic 35.0%
ACTATTTCCTCCAATCAAGA+TGG + chr2_4:52493112-52493131 Msa0334220:CDS 35.0%
TTCATTTCCATCTTGATTGG+AGG - chr2_4:52493122-52493141 None:intergenic 35.0%
CTCTTCATTTCCATCTTGAT+TGG - chr2_4:52493125-52493144 None:intergenic 35.0%
AAGAGAACTCGAGGTATATT+TGG + chr2_4:52493140-52493159 Msa0334220:intron 35.0%
AAAATCCAGCAACTAAAGCA+CGG - chr2_4:52493324-52493343 None:intergenic 35.0%
! TGGATTTTATCCAGAATCCA+TGG + chr2_4:52493336-52493355 Msa0334220:CDS 35.0%
ATAAGATCATCCATGGATTC+TGG - chr2_4:52493349-52493368 None:intergenic 35.0%
AAAAGAATGAAGACAAGCTG+TGG + chr2_4:52493528-52493547 Msa0334220:CDS 35.0%
TGTCCTTAAGTAAGGCAATA+CGG - chr2_4:52493591-52493610 None:intergenic 35.0%
ATTCCAGATGTCCTTAAGTA+AGG - chr2_4:52493599-52493618 None:intergenic 35.0%
GACTCGGGAAGTAAAATAAA+TGG + chr2_4:52493638-52493657 Msa0334220:CDS 35.0%
GGGAAGTAAAATAAATGGCA+CGG + chr2_4:52493643-52493662 Msa0334220:CDS 35.0%
GGAAGTAAAATAAATGGCAC+GGG + chr2_4:52493644-52493663 Msa0334220:CDS 35.0%
TTGCATATTCCCAGGATAAT+AGG - chr2_4:52494313-52494332 None:intergenic 35.0%
ATTATCCTGGGAATATGCAA+TGG + chr2_4:52494313-52494332 Msa0334220:CDS 35.0%
GAAAAAGGTAGTATCACTGA+AGG + chr2_4:52494600-52494619 Msa0334220:CDS 35.0%
TGGAAATTCCTTGAAACACA+AGG + chr2_4:52494653-52494672 Msa0334220:CDS 35.0%
TTGAACCATTTAGCATGTCA+TGG - chr2_4:52494758-52494777 None:intergenic 35.0%
ATGACATGCTAAATGGTTCA+AGG + chr2_4:52494757-52494776 Msa0334220:CDS 35.0%
GGCAAAAAGGTAATAACAAC+TGG + chr2_4:52494796-52494815 Msa0334220:CDS 35.0%
ATGAGCAAGAAGTTTGAGAA+TGG + chr2_4:52494909-52494928 Msa0334220:CDS 35.0%
CGTGTTGAATATTTCAACGA+AGG + chr2_4:52495041-52495060 Msa0334220:CDS 35.0%
TGAATATTTCAACGAAGGGA+AGG + chr2_4:52495046-52495065 Msa0334220:CDS 35.0%
TCTCAGAGAAATGATGAATC+GGG + chr2_4:52495122-52495141 Msa0334220:CDS 35.0%
!!! CCTTTCTTGTTTTTCTCTAC+AGG - chr2_4:52495185-52495204 None:intergenic 35.0%
CCTGTAGAGAAAAACAAGAA+AGG + chr2_4:52495182-52495201 Msa0334220:CDS 35.0%
AACAGCTTCTGATATCAGTT+TGG + chr2_4:52495268-52495287 Msa0334220:CDS 35.0%
TTATCCATTTCCATTCTCCA+AGG - chr2_4:52495437-52495456 None:intergenic 35.0%
! CGCTCCAGTATTTTTCTTAT+CGG - chr2_4:52495546-52495565 None:intergenic 35.0%
AAAAATACTGGAGCGAAATC+TGG + chr2_4:52495551-52495570 Msa0334220:CDS 35.0%
AAAATACTGGAGCGAAATCT+GGG + chr2_4:52495552-52495571 Msa0334220:CDS 35.0%
TCTTGACATGACATCAGATT+TGG - chr2_4:52495627-52495646 None:intergenic 35.0%
CACATATATATGGTCGAGAA+TGG - chr2_4:52495727-52495746 None:intergenic 35.0%
CCATTAGATGGATGAATCTT+AGG - chr2_4:52495974-52495993 None:intergenic 35.0%
CCTAAGATTCATCCATCTAA+TGG + chr2_4:52495971-52495990 Msa0334220:CDS 35.0%
TTCTTAGTCTCTCCATTAGA+TGG - chr2_4:52495986-52496005 None:intergenic 35.0%
TCACCTAATCAAGCAAATTC+AGG + chr2_4:52496079-52496098 Msa0334220:CDS 35.0%
!! GTTTTGTTCAACTGCTTTTG+TGG - chr2_4:52496293-52496312 None:intergenic 35.0%
GACAAGTTATCTTCACTTCA+TGG + chr2_4:52496499-52496518 Msa0334220:CDS 35.0%
ACATACTGCTGTGAATTCAA+AGG + chr2_4:52496597-52496616 Msa0334220:CDS 35.0%
TGTGAATTCAAAGGTGAATC+AGG + chr2_4:52496606-52496625 Msa0334220:CDS 35.0%
TTATCCATTTCTTCCTGTTG+TGG - chr2_4:52496723-52496742 None:intergenic 35.0%
GAAATGGATAAATGATGAGG+CGG + chr2_4:52496732-52496751 Msa0334220:CDS 35.0%
TTCCGTAAGCTTATCTTCTT+TGG + chr2_4:52496778-52496797 Msa0334220:CDS 35.0%
! AGCTTATCTTCTTTGGAAGA+AGG + chr2_4:52496785-52496804 Msa0334220:CDS 35.0%
GGATTGATACTTTATGGCAA+AGG + chr2_4:52496825-52496844 Msa0334220:three_prime_UTR 35.0%
ATATTGAATAGCCAAGAGCA+TGG - chr2_4:52496901-52496920 None:intergenic 35.0%
ACTTTCTACTGAGCTAAGAA+TGG - chr2_4:52496946-52496965 None:intergenic 35.0%
!! TTAGCTCAGTAGAAAGTGTT+TGG + chr2_4:52496949-52496968 Msa0334220:three_prime_UTR 35.0%
AAGAATAAGACCATGTGGAT+TGG + chr2_4:52497068-52497087 Msa0334220:three_prime_UTR 35.0%
ATCTAAGAATGTGTTGGGTG+TGG - chr2_4:52491529-52491548 None:intergenic 40.0%
! TGTGACTTGATGATTGTTGC+TGG + chr2_4:52491981-52492000 Msa0334220:CDS 40.0%
AGATTCAGGACATAGAGTGA+TGG - chr2_4:52492099-52492118 None:intergenic 40.0%
CATGGAGCATATGTAGATTC+AGG - chr2_4:52492113-52492132 None:intergenic 40.0%
CTGAATCTACATATGCTCCA+TGG + chr2_4:52492111-52492130 Msa0334220:CDS 40.0%
ATCACTCATGTGTGTGACTT+TGG + chr2_4:52492277-52492296 Msa0334220:intron 40.0%
ATGCGACTACAATTGCATTG+CGG + chr2_4:52492554-52492573 Msa0334220:intron 40.0%
! CTACAATTGCATTGCGGTTT+TGG + chr2_4:52492560-52492579 Msa0334220:intron 40.0%
GAGGTTTGTGACCATAGAAA+AGG + chr2_4:52492742-52492761 Msa0334220:CDS 40.0%
! CTGCACAATCTCCTTTTCTA+TGG - chr2_4:52492756-52492775 None:intergenic 40.0%
AAGGAGATTGTGCAGATTGA+AGG + chr2_4:52492761-52492780 Msa0334220:CDS 40.0%
GTGTAAAATCGGACAGATGT+GGG - chr2_4:52492938-52492957 None:intergenic 40.0%
! CACATCTGTCCGATTTTACA+CGG + chr2_4:52492937-52492956 Msa0334220:intron 40.0%
ATGGAAATGAAGAGAACTCG+AGG + chr2_4:52493131-52493150 Msa0334220:CDS 40.0%
CACACATCTTTGTACTCTTC+AGG + chr2_4:52493180-52493199 Msa0334220:intron 40.0%
! GATTGTCTAGAACACGTTGA+AGG - chr2_4:52493261-52493280 None:intergenic 40.0%
GCTTTGCAAAGAACAAGCAA+TGG + chr2_4:52493291-52493310 Msa0334220:CDS 40.0%
AAATCCAGCAACTAAAGCAC+GGG - chr2_4:52493323-52493342 None:intergenic 40.0%
! ATTTGTTTCGCTGACGCTTT+TGG + chr2_4:52493367-52493386 Msa0334220:CDS 40.0%
!!! CTTTTGGAGCTTCACGTTTA+AGG + chr2_4:52493383-52493402 Msa0334220:CDS 40.0%
TAAGGTCTGCGAGCATATAT+TGG + chr2_4:52493401-52493420 Msa0334220:intron 40.0%
AACCCGTATTGCCTTACTTA+AGG + chr2_4:52493585-52493604 Msa0334220:CDS 40.0%
GTCCTTAAGTAAGGCAATAC+GGG - chr2_4:52493590-52493609 None:intergenic 40.0%
TTGCCTTACTTAAGGACATC+TGG + chr2_4:52493593-52493612 Msa0334220:CDS 40.0%
! ACATCTGGAATCATACTTGC+AGG + chr2_4:52493608-52493627 Msa0334220:CDS 40.0%
TGGAGTTGAATCAGAAACTG+AGG - chr2_4:52493675-52493694 None:intergenic 40.0%
! ATCCACTTGGTAGTTTACCT+TGG - chr2_4:52493721-52493740 None:intergenic 40.0%
! ACCAAGTGGATTCAGTATGT+TGG + chr2_4:52493730-52493749 Msa0334220:intron 40.0%
ACCAACATACTGAATCCACT+TGG - chr2_4:52493734-52493753 None:intergenic 40.0%
GTTCAAACACCATCATCTGA+TGG + chr2_4:52494159-52494178 Msa0334220:CDS 40.0%
AAACACCATCATCTGATGGA+AGG + chr2_4:52494163-52494182 Msa0334220:CDS 40.0%
AACACCATCATCTGATGGAA+GGG + chr2_4:52494164-52494183 Msa0334220:CDS 40.0%
! ATGTACTGTGGATGATGGTT+CGG - chr2_4:52494210-52494229 None:intergenic 40.0%
TGTGAATGTACTGTGGATGA+TGG - chr2_4:52494215-52494234 None:intergenic 40.0%
TACATGTATCCTTGGTATGG+AGG - chr2_4:52494267-52494286 None:intergenic 40.0%
GGATACATGTATCCTTGGTA+TGG - chr2_4:52494270-52494289 None:intergenic 40.0%
TACCAAGGATACATGTATCC+TGG + chr2_4:52494270-52494289 Msa0334220:CDS 40.0%
TACCAGGATACATGTATCCT+TGG - chr2_4:52494275-52494294 None:intergenic 40.0%
ATACATGTATCCTGGTATGC+AGG + chr2_4:52494278-52494297 Msa0334220:CDS 40.0%
TTCCGTCTTCCTATTATCCT+GGG + chr2_4:52494301-52494320 Msa0334220:CDS 40.0%
TTCCCAGGATAATAGGAAGA+CGG - chr2_4:52494306-52494325 None:intergenic 40.0%
AATATGCAATGGCCTCCAAA+CGG + chr2_4:52494324-52494343 Msa0334220:CDS 40.0%
TTCCTTGAAACACAAGGTAG+AGG + chr2_4:52494659-52494678 Msa0334220:CDS 40.0%
TTCCTCTACCTTGTGTTTCA+AGG - chr2_4:52494664-52494683 None:intergenic 40.0%
! TTGTTTCTTATGCTGACGAG+AGG - chr2_4:52494721-52494740 None:intergenic 40.0%
AAGCACCATGACATGCTAAA+TGG + chr2_4:52494750-52494769 Msa0334220:CDS 40.0%
!! TCAAGGAATGCTGATTCCAA+CGG + chr2_4:52494774-52494793 Msa0334220:CDS 40.0%
! GTTATTACCTTTTTGCCCGT+TGG - chr2_4:52494793-52494812 None:intergenic 40.0%
CGTCTCTCAAAAGAAGATTC+TGG - chr2_4:52494830-52494849 None:intergenic 40.0%
GCAAGAAGTTTGAGAATGGA+AGG + chr2_4:52494913-52494932 Msa0334220:CDS 40.0%
ATTCCTTTATTGTGGCAGAG+AGG + chr2_4:52494994-52495013 Msa0334220:CDS 40.0%
TTCCTTTATTGTGGCAGAGA+GGG + chr2_4:52494995-52495014 Msa0334220:CDS 40.0%
TATTTCAACGAAGGGAAGGA+TGG + chr2_4:52495050-52495069 Msa0334220:CDS 40.0%
GACAAAGAAAATTACCAGCG+AGG + chr2_4:52495088-52495107 Msa0334220:CDS 40.0%
AGATAACAACAATTCCTCGC+TGG - chr2_4:52495105-52495124 None:intergenic 40.0%
! AGTTTGGTTTCAGACGTTGT+CGG + chr2_4:52495284-52495303 Msa0334220:CDS 40.0%
TTCACAAACGGTACACAAGA+AGG + chr2_4:52495317-52495336 Msa0334220:CDS 40.0%
GTCAAGAAGTAGAACATTGC+CGG + chr2_4:52495640-52495659 Msa0334220:CDS 40.0%
TCAAGAAGTAGAACATTGCC+GGG + chr2_4:52495641-52495660 Msa0334220:CDS 40.0%
TACAGCTACGAAGAGCAAAT+CGG + chr2_4:52495673-52495692 Msa0334220:CDS 40.0%
TACGAAGAGCAAATCGGAAA+AGG + chr2_4:52495679-52495698 Msa0334220:CDS 40.0%
GAGAAGAGTTAATGATGCAG+CGG + chr2_4:52495864-52495883 Msa0334220:CDS 40.0%
! CTTCTTCAAGGCACTTCTTT+CGG - chr2_4:52495903-52495922 None:intergenic 40.0%
TTCTGTTCCAGTCTTCTTCA+AGG - chr2_4:52495915-52495934 None:intergenic 40.0%
! AGACTTCTTTGACTTCAGCA+AGG + chr2_4:52495939-52495958 Msa0334220:CDS 40.0%
! TCTTTGACTTCAGCAAGGAA+AGG + chr2_4:52495944-52495963 Msa0334220:CDS 40.0%
! CTTTGACTTCAGCAAGGAAA+GGG + chr2_4:52495945-52495964 Msa0334220:CDS 40.0%
AACTGAACAAACCAGTCCTT+AGG + chr2_4:52496005-52496024 Msa0334220:CDS 40.0%
AAACCTTCTGCTGAGTTACT+CGG - chr2_4:52496060-52496079 None:intergenic 40.0%
! GGACCTGAATTTGCTTGATT+AGG - chr2_4:52496085-52496104 None:intergenic 40.0%
! ACCTTATTTGCCTTCAAGGA+AGG - chr2_4:52496118-52496137 None:intergenic 40.0%
! AGGTACCTTATTTGCCTTCA+AGG - chr2_4:52496122-52496141 None:intergenic 40.0%
!! TGGAGCTGTTTCTTCAGTAA+AGG - chr2_4:52496142-52496161 None:intergenic 40.0%
AAATATCAGCCAACTTCGCA+CGG + chr2_4:52496411-52496430 Msa0334220:CDS 40.0%
TCTTGCATTGCTTGGTTACT+CGG - chr2_4:52496694-52496713 None:intergenic 40.0%
! GGATTGATTCTTGCATTGCT+TGG - chr2_4:52496702-52496721 None:intergenic 40.0%
TGCAAGAATCAATCCACAAC+AGG + chr2_4:52496707-52496726 Msa0334220:CDS 40.0%
CAATCCACAACAGGAAGAAA+TGG + chr2_4:52496716-52496735 Msa0334220:CDS 40.0%
GACTCTTCAAAAGTAGCGAA+AGG + chr2_4:52496754-52496773 Msa0334220:CDS 40.0%
GTTCTCTTTATCCATGCTCT+TGG + chr2_4:52496887-52496906 Msa0334220:three_prime_UTR 40.0%
ACACACTCATTCATGTGACA+TGG + chr2_4:52496998-52497017 Msa0334220:three_prime_UTR 40.0%
CATGTGACATGGTAATCATG+TGG + chr2_4:52497009-52497028 Msa0334220:three_prime_UTR 40.0%
GATAGCAATTCCAATCCACA+TGG - chr2_4:52497081-52497100 None:intergenic 40.0%
AGAATGTGTTGGGTGTGGTT+AGG - chr2_4:52491524-52491543 None:intergenic 45.0%
AACTCACCCCAACAAGAACA+AGG + chr2_4:52491877-52491896 Msa0334220:CDS 45.0%
! GACTTGATGATTGTTGCTGG+TGG + chr2_4:52491984-52492003 Msa0334220:CDS 45.0%
AAACCTTTGCAAGGTGGCTT+TGG - chr2_4:52492141-52492160 None:intergenic 45.0%
!! TCCTCTTTTAGTTACCAGGG+CGG + chr2_4:52492456-52492475 Msa0334220:intron 45.0%
! TTTAAAACCTTGATCCGCCC+TGG - chr2_4:52492473-52492492 None:intergenic 45.0%
GCACTCCAGAAGTTATAGAG+AGG + chr2_4:52492723-52492742 Msa0334220:CDS 45.0%
AAACTTCCTCGTGGTAAACG+TGG + chr2_4:52492877-52492896 Msa0334220:intron 45.0%
CGTGTAAAATCGGACAGATG+TGG - chr2_4:52492939-52492958 None:intergenic 45.0%
AGGAAATGTGTCATATGCCG+AGG + chr2_4:52493072-52493091 Msa0334220:intron 45.0%
GGAAATGTGTCATATGCCGA+GGG + chr2_4:52493073-52493092 Msa0334220:intron 45.0%
GAAATGTGTCATATGCCGAG+GGG + chr2_4:52493074-52493093 Msa0334220:CDS 45.0%
GAATGAAGACAAGCTGTGGA+TGG + chr2_4:52493532-52493551 Msa0334220:CDS 45.0%
ACTTGCAGGTGAAGATGACT+CGG + chr2_4:52493622-52493641 Msa0334220:CDS 45.0%
ATGTCGAAACTTGCATGGCT+TGG - chr2_4:52493695-52493714 None:intergenic 45.0%
AGCCATGCAAGTTTCGACAT+TGG + chr2_4:52493695-52493714 Msa0334220:CDS 45.0%
!! AGTGCAAAAGCATCATGGGA+AGG - chr2_4:52493853-52493872 None:intergenic 45.0%
!! GTCGAGTGCAAAAGCATCAT+GGG - chr2_4:52493857-52493876 None:intergenic 45.0%
GTCGAAGACGTATGCACAAT+TGG - chr2_4:52493879-52493898 None:intergenic 45.0%
GATGGTGTTTGAACTGATGC+TGG - chr2_4:52494153-52494172 None:intergenic 45.0%
ACACCATCATCTGATGGAAG+GGG + chr2_4:52494165-52494184 Msa0334220:CDS 45.0%
GTTCCGTCTTCCTATTATCC+TGG + chr2_4:52494300-52494319 Msa0334220:CDS 45.0%
ATATGCAATGGCCTCCAAAC+GGG + chr2_4:52494325-52494344 Msa0334220:CDS 45.0%
AGCATGGAAAGAAGTCGTCA+AGG + chr2_4:52494529-52494548 Msa0334220:CDS 45.0%
TCCAATGGAGACGGAGAAAA+AGG + chr2_4:52494585-52494604 Msa0334220:CDS 45.0%
! ACCTTTTTCTCCGTCTCCAT+TGG - chr2_4:52494589-52494608 None:intergenic 45.0%
TGAAGGGAGTTTGTCGAATG+AGG + chr2_4:52494617-52494636 Msa0334220:CDS 45.0%
!! CAAGGAATGCTGATTCCAAC+GGG + chr2_4:52494775-52494794 Msa0334220:CDS 45.0%
! TTTTAGTGACGTCTGCTTCG+TGG - chr2_4:52494956-52494975 None:intergenic 45.0%
TTCCCTCTCTGCCACAATAA+AGG - chr2_4:52495000-52495019 None:intergenic 45.0%
TATTGTGGCAGAGAGGGAAT+TGG + chr2_4:52495001-52495020 Msa0334220:CDS 45.0%
AGAGAGGGAATTGGACAGTA+AGG + chr2_4:52495010-52495029 Msa0334220:CDS 45.0%
GAGAGGGAATTGGACAGTAA+GGG + chr2_4:52495011-52495030 Msa0334220:CDS 45.0%
CATGATTCAAGCTCGACCAT+TGG + chr2_4:52495226-52495245 Msa0334220:CDS 45.0%
! ATCTGGCTCGTGGGAAATTA+AGG - chr2_4:52495363-52495382 None:intergenic 45.0%
AGAACCATGAGGAGATCATC+TGG - chr2_4:52495380-52495399 None:intergenic 45.0%
AATCACGATCGAGAACCATG+AGG - chr2_4:52495391-52495410 None:intergenic 45.0%
AGCACCTTGGAGAATGGAAA+TGG + chr2_4:52495430-52495449 Msa0334220:CDS 45.0%
!! GGCGCCGATAAGAAAAATAC+TGG + chr2_4:52495539-52495558 Msa0334220:CDS 45.0%
!! AGAAGTGCCTTGAAGAAGAC+TGG + chr2_4:52495905-52495924 Msa0334220:CDS 45.0%
AACCTTCTGCTGAGTTACTC+GGG - chr2_4:52496059-52496078 None:intergenic 45.0%
TTCAAGGAAGGCTTCTTGGT+TGG - chr2_4:52496106-52496125 None:intergenic 45.0%
AACCAAGAAGCCTTCCTTGA+AGG + chr2_4:52496105-52496124 Msa0334220:CDS 45.0%
GCCTTCCTTGAAGGCAAATA+AGG + chr2_4:52496114-52496133 Msa0334220:CDS 45.0%
! CTTAGTCTTTGCGCTACTCT+TGG - chr2_4:52496227-52496246 None:intergenic 45.0%
TTTGTGGCATCAGGTTTGAC+AGG - chr2_4:52496277-52496296 None:intergenic 45.0%
!! TCAACTGCTTTTGTGGCATC+AGG - chr2_4:52496286-52496305 None:intergenic 45.0%
AAGGAGCTGAAGAACCTTTG+TGG + chr2_4:52496804-52496823 Msa0334220:exon 45.0%
!!! TTTTTTTTTTTTTTATCTTT+TGG + chr2_4:52492167-52492186 Msa0334220:intron 5.0%
ATGTGTTGGGTGTGGTTAGG+AGG - chr2_4:52491521-52491540 None:intergenic 50.0%
!! AAGGTGGCTTTGGTGAACCA+TGG - chr2_4:52492131-52492150 None:intergenic 50.0%
TCACCAAAGCCACCTTGCAA+AGG + chr2_4:52492135-52492154 Msa0334220:CDS 50.0%
TCCGCCCTGGTAACTAAAAG+AGG - chr2_4:52492460-52492479 None:intergenic 50.0%
TTAGTTACCAGGGCGGATCA+AGG + chr2_4:52492463-52492482 Msa0334220:intron 50.0%
ATTCCTCCACGTTTACCACG+AGG - chr2_4:52492886-52492905 None:intergenic 50.0%
CATGCTTCCCTACACATGAC+AGG - chr2_4:52493482-52493501 None:intergenic 50.0%
CTTGCAGGTGAAGATGACTC+GGG + chr2_4:52493623-52493642 Msa0334220:CDS 50.0%
GGCCAATGTCGAAACTTGCA+TGG - chr2_4:52493700-52493719 None:intergenic 50.0%
GCAAGTTTCGACATTGGCCA+AGG + chr2_4:52493701-52493720 Msa0334220:CDS 50.0%
GGCCAAGGTAAACTACCAAG+TGG + chr2_4:52493716-52493735 Msa0334220:intron 50.0%
!! GGTCGAGTGCAAAAGCATCA+TGG - chr2_4:52493858-52493877 None:intergenic 50.0%
ATACGTCTTCGACTGCACAG+CGG + chr2_4:52493886-52493905 Msa0334220:intron 50.0%
CAACAAACGCCTCCATACCA+AGG + chr2_4:52494255-52494274 Msa0334220:CDS 50.0%
TATGCAATGGCCTCCAAACG+GGG + chr2_4:52494326-52494345 Msa0334220:CDS 50.0%
ATTTCAGAGCGATCCCCGTT+TGG - chr2_4:52494342-52494361 None:intergenic 50.0%
!! AAACGGGGATCGCTCTGAAA+TGG + chr2_4:52494341-52494360 Msa0334220:CDS 50.0%
CGTCTTCGCAACAAGAAGCA+TGG + chr2_4:52494513-52494532 Msa0334220:CDS 50.0%
! GCTGATTCCAACGGGCAAAA+AGG + chr2_4:52494783-52494802 Msa0334220:CDS 50.0%
GGTGCGGCTGAATTCACAAA+CGG + chr2_4:52495305-52495324 Msa0334220:CDS 50.0%
TACAGCAGAATGCAGCACCT+TGG + chr2_4:52495417-52495436 Msa0334220:CDS 50.0%
GAATGCAGCACCTTGGAGAA+TGG + chr2_4:52495424-52495443 Msa0334220:CDS 50.0%
! ATGGTGGAACTCCTAAGGAC+TGG - chr2_4:52496019-52496038 None:intergenic 50.0%
!! GATCGATGGTGGAACTCCTA+AGG - chr2_4:52496024-52496043 None:intergenic 50.0%
TGCCTTCAAGGAAGGCTTCT+TGG - chr2_4:52496110-52496129 None:intergenic 50.0%
!! AGACATTGGAGTGCTGACCA+AGG + chr2_4:52496333-52496352 Msa0334220:CDS 50.0%
ATGTTTCTCCGGTGATGCCT+TGG - chr2_4:52496353-52496372 None:intergenic 50.0%
TGCATTGCTTGGTTACTCGG+CGG - chr2_4:52496691-52496710 None:intergenic 50.0%
CTTCCTCGTGGTAAACGTGG+AGG + chr2_4:52492880-52492899 Msa0334220:intron 55.0%
! TGACCTTTTGACACGCCCCT+CGG - chr2_4:52493092-52493111 None:intergenic 55.0%
AGCAACTAAAGCACGGGCGT+AGG - chr2_4:52493317-52493336 None:intergenic 55.0%
TACGCCCGTGCTTTAGTTGC+TGG + chr2_4:52493316-52493335 Msa0334220:CDS 55.0%
GGATGAGATTGCAGCCATGC+AGG + chr2_4:52493553-52493572 Msa0334220:CDS 55.0%
TGGCCCCTTCCATCAGATGA+TGG - chr2_4:52494171-52494190 None:intergenic 55.0%
! TGATGGTTCGGCCATGACCT+CGG - chr2_4:52494198-52494217 None:intergenic 55.0%
GAAGACGGAACCTGCATACC+AGG - chr2_4:52494291-52494310 None:intergenic 55.0%
GGAGGCCATTGCATATTCCC+AGG - chr2_4:52494321-52494340 None:intergenic 55.0%
AGAGGAAGCTGTTGCGTCAC+TGG + chr2_4:52494677-52494696 Msa0334220:CDS 55.0%
TAGTGACGTCTGCTTCGTGG+TGG - chr2_4:52494953-52494972 None:intergenic 55.0%
GGTTTCAGACGTTGTCGGTG+CGG + chr2_4:52495289-52495308 Msa0334220:CDS 55.0%
! GAGGAGATCATCTGGCTCGT+GGG - chr2_4:52495372-52495391 None:intergenic 55.0%
! TGAGGAGATCATCTGGCTCG+TGG - chr2_4:52495373-52495392 None:intergenic 55.0%
CGAGCCAGATGATCTCCTCA+TGG + chr2_4:52495373-52495392 Msa0334220:CDS 55.0%
GTAGAACATTGCCGGGAAGC+AGG + chr2_4:52495648-52495667 Msa0334220:CDS 55.0%
GTAGCTGTAGACCTGCTTCC+CGG - chr2_4:52495662-52495681 None:intergenic 55.0%
AGTTGCAAGGCGATCGATGG+TGG - chr2_4:52496035-52496054 None:intergenic 55.0%
GAGTTACTCGGGCAGTTGCA+AGG - chr2_4:52496048-52496067 None:intergenic 55.0%
TGCCCGAGTAACTCAGCAGA+AGG + chr2_4:52496054-52496073 Msa0334220:CDS 55.0%
!! AGTGCTGACCAAGGCATCAC+CGG + chr2_4:52496342-52496361 Msa0334220:CDS 55.0%
AAGACGAGTCCGTGCGAAGT+TGG - chr2_4:52496423-52496442 None:intergenic 55.0%
ATTGCTTGGTTACTCGGCGG+AGG - chr2_4:52496688-52496707 None:intergenic 55.0%
! ATGCCGAGGGGCGTGTCAAA+AGG + chr2_4:52493086-52493105 Msa0334220:CDS 60.0%
GGGTTGCGAAGACACCTGCA+TGG - chr2_4:52493570-52493589 None:intergenic 60.0%
ATGGAAGGGGCCAAATGCCG+AGG + chr2_4:52494178-52494197 Msa0334220:CDS 60.0%
TCGGCCATGACCTCGGCATT+TGG - chr2_4:52494191-52494210 None:intergenic 60.0%
TCAGAGCGATCCCCGTTTGG+AGG - chr2_4:52494339-52494358 None:intergenic 60.0%
GGCAGTTGCAAGGCGATCGA+TGG - chr2_4:52496038-52496057 None:intergenic 60.0%
GGGGCCAAATGCCGAGGTCA+TGG + chr2_4:52494184-52494203 Msa0334220:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 52491461 52497308 52491461 ID=Msa0334220;Name=Msa0334220
chr2_4 mRNA 52491461 52497308 52491461 ID=Msa0334220-mRNA-1;Parent=Msa0334220;Name=Msa0334220-mRNA-1;_AED=0.12;_eAED=0.12;_QI=379|1|1|1|1|1|8|495|1111
chr2_4 exon 52491461 52491898 52491461 ID=Msa0334220-mRNA-1:exon:15809;Parent=Msa0334220-mRNA-1
chr2_4 exon 52491980 52492156 52491980 ID=Msa0334220-mRNA-1:exon:15810;Parent=Msa0334220-mRNA-1
chr2_4 exon 52492706 52492809 52492706 ID=Msa0334220-mRNA-1:exon:15811;Parent=Msa0334220-mRNA-1
chr2_4 exon 52493074 52493152 52493074 ID=Msa0334220-mRNA-1:exon:15812;Parent=Msa0334220-mRNA-1
chr2_4 exon 52493252 52493404 52493252 ID=Msa0334220-mRNA-1:exon:15813;Parent=Msa0334220-mRNA-1
chr2_4 exon 52493493 52493722 52493493 ID=Msa0334220-mRNA-1:exon:15814;Parent=Msa0334220-mRNA-1
chr2_4 exon 52494139 52495700 52494139 ID=Msa0334220-mRNA-1:exon:15815;Parent=Msa0334220-mRNA-1
chr2_4 exon 52495842 52497308 52495842 ID=Msa0334220-mRNA-1:exon:15816;Parent=Msa0334220-mRNA-1
chr2_4 five_prime_UTR 52491461 52491839 52491461 ID=Msa0334220-mRNA-1:five_prime_utr;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52491840 52491898 52491840 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52491980 52492156 52491980 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52492706 52492809 52492706 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52493074 52493152 52493074 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52493252 52493404 52493252 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52493493 52493722 52493493 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52494139 52495700 52494139 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 CDS 52495842 52496813 52495842 ID=Msa0334220-mRNA-1:cds;Parent=Msa0334220-mRNA-1
chr2_4 three_prime_UTR 52496814 52497308 52496814 ID=Msa0334220-mRNA-1:three_prime_utr;Parent=Msa0334220-mRNA-1
Gene Sequence

>Msa0334220

ATGGATCCAAGTTCTTATCTTGATCATGCTCTTTTTCAACTCACCCCAACAAGAACAAGATGTGACTTGATGATTGTTGCTGGTGGTGTTAATGAAAGACTAGCTTCTGGGCTGTTAGAACCGTTTGTTTCTCACCTTAAATGTGCAAAAGATCAGATTTCAAAAGGTGGCTATTCCATCACTCTATGTCCTGAATCTACATATGCTCCATGGTTCACCAAAGCCACCTTGCAAAGGTTTGTTAGATTTGTGAGCACTCCAGAAGTTATAGAGAGGTTTGTGACCATAGAAAAGGAGATTGTGCAGATTGAAGGTTCAAGTCAATCAAATGAAGTAGAAGGAAATGTGTCATATGCCGAGGGGCGTGTCAAAAGGTCAACTATTTCCTCCAATCAAGATGGAAATGAAGAGAACTCGAGGGTTCGCCTTCAACGTGTTCTAGACAATCGTAAAGCTATGCTTTGCAAAGAACAAGCAATGGCCTACGCCCGTGCTTTAGTTGCTGGATTTTATCCAGAATCCATGGATGATCTTATTTGTTTCGCTGACGCTTTTGGAGCTTCACGTTTAAGGGAAGCATGCTTAAATTTCTTAGAGCTATGCAAACAAAAGAATGAAGACAAGCTGTGGATGGATGAGATTGCAGCCATGCAGGTGTCTTCGCAACCCGTATTGCCTTACTTAAGGACATCTGGAATCATACTTGCAGGTGAAGATGACTCGGGAAGTAAAATAAATGGCACGGGTGATGCCTCAGTTTCTGATTCAACTCCAAGCCATGCAAGTTTCGACATTGGCCAAGATTATAGCTTGCCAGCATCAGTTCAAACACCATCATCTGATGGAAGGGGCCAAATGCCGAGGTCATGGCCGAACCATCATCCACAGTACATTCACAATTTTCAGGGTCATGCATTTCAACAAACGCCTCCATACCAAGGATACATGTATCCTGGTATGCAGGTTCCGTCTTCCTATTATCCTGGGAATATGCAATGGCCTCCAAACGGGGATCGCTCTGAAATGGATTCTCATAAGAAAAAGAAGAAGAAAAACAAGAAATCTCAGGTATTGGATCACTCTGAAGAAGATGAGTCAACTGCATCGTCTGATTCTACTTATGAGAGTGATTCAGATGACAATTCAAAGCAAAGCAAAAAGAACTCTTCAACGGAGCGTCTTCGCAACAAGAAGCATGGAAAGAAGTCGTCAAGGAAAGTAGTTATCCGTAATATAAACTATATAACATCCAATGGAGACGGAGAAAAAGGTAGTATCACTGAAGGGAGTTTGTCGAATGAGGAAGAATTTATCAATGGAAATTCCTTGAAACACAAGGTAGAGGAAGCTGTTGCGTCACTGGAGAAAAGAAACAAGTCAACCTCTCGTCAGCATAAGAAACAACATAGCGAAAAGCACCATGACATGCTAAATGGTTCAAGGAATGCTGATTCCAACGGGCAAAAAGGTAATAACAACTGGGATGCTTTCCAGAATCTTCTTTTGAGAGACGATGATGATTCTACTCATGATATAGGAAAACAGCCAATGAAATTTCAGGAAGAATATGCTATGAGCAAGAAGTTTGAGAATGGAAGGTCAAATGAGTTTAACCACCACGAAGCAGACGTCACTAAAACTCGAGTAGTTTCAAATGATTCCTTTATTGTGGCAGAGAGGGAATTGGACAGTAAGGGTCGAGATCGTGTTGAATATTTCAACGAAGGGAAGGATGGATCTACATTCATGCAGACAAAGAAAATTACCAGCGAGGAATTGTTGTTATCTCAGAGAAATGATGAATCGGGTAGCTATTATGTGTCATCTTCAGCTAGAGATTATTTACCTGTAGAGAAAAACAAGAAAGGCATTTTAGCTGACGACTCTTTCATGATTCAAGCTCGACCATTGGAATATCAATTTAATTCTCAAACAGCTTCTGATATCAGTTTGGTTTCAGACGTTGTCGGTGCGGCTGAATTCACAAACGGTACACAAGAAGGTTCACACAAGAAGACTGATGCCTTAATTTCCCACGAGCCAGATGATCTCCTCATGGTTCTCGATCGTGATTCAGCTGTACAGCAGAATGCAGCACCTTGGAGAATGGAAATGGATAATGAAAACAACATCTCTCTATACGAAGCTAACAAAAAGATTTCGGACGCTAAAACCGAAAGAAATCTTGTATCTAATCATGAAGGCGCCGATAAGAAAAATACTGGAGCGAAATCTGGGAAAATTTCAAGTAAAGAGGCAAAATCGAAGACTCCAAATGCATCTAAAACCAAATCTGATGTCATGTCAAGAAGTAGAACATTGCCGGGAAGCAGGTCTACAGCTACGAAGAGCAAATCGGAAAAGGAAGAAGAAAATAGAAAGAGAAGAGAAGAGTTAATGATGCAGCGGCAGAAAAGAATTGCCGAAAGAAGTGCCTTGAAGAAGACTGGAACAGAAACTAAGACTTCTTTGACTTCAGCAAGGAAAGGGAATCCTAAGATTCATCCATCTAATGGAGAGACTAAGAAACTGAACAAACCAGTCCTTAGGAGTTCCACCATCGATCGCCTTGCAACTGCCCGAGTAACTCAGCAGAAGGTTTCACCTAATCAAGCAAATTCAGGTCCAACCAAGAAGCCTTCCTTGAAGGCAAATAAGGTACCTTTACTGAAGAAACAGCTCCAAAAAGAAGTGAAATCTTCAAATCATAAAGAAGATGTGCATAAAACAAAAGGGAAAGTTCTTTCCAAGAGTAGCGCAAAGACTAAGAATGAAATCAAGGCTTCGGTAGTATTGCCTGTCAAACCTGATGCCACAAAAGCAGTTGAACAAAACAACAACAATCATGGTTTGAAAGACATTGGAGTGCTGACCAAGGCATCACCGGAGAAACATTCAAGATATTTGACTTCAGACAGAGAAATCTTACATGAAAATATCAGCCAACTTCGCACGGACTCGTCTTTGTCAAGTCATGATCATGCATTGAGAGGAAATCAGTCTAGAAATGAAGTAGTATCAGACAAGTTATCTTCACTTCATGGCGATAATAATCAACCTCGACATAATAATGACATGATCACAACTTCTACAGCTGCATTACCTAACAAACCATTAATACATACTGCTGTGAATTCAAAGGTGAATCAGGAAATAGAAGAAAGTAATGCTACTTCACCTAAAGTCTCAGAGATTCAAATCTCTACTCCTCCGCCGAGTAACCAAGCAATGCAAGAATCAATCCACAACAGGAAGAAATGGATAAATGATGAGGCGGACTCTTCAAAAGTAGCGAAAGGATTCCGTAAGCTTATCTTCTTTGGAAGAAGGAGCTGA
Protein sequence

>Msa0334220

MDPSSYLDHALFQLTPTRTRCDLMIVAGGVNERLASGLLEPFVSHLKCAKDQISKGGYSITLCPESTYAPWFTKATLQRFVRFVSTPEVIERFVTIEKEIVQIEGSSQSNEVEGNVSYAEGRVKRSTISSNQDGNEENSRVRLQRVLDNRKAMLCKEQAMAYARALVAGFYPESMDDLICFADAFGASRLREACLNFLELCKQKNEDKLWMDEIAAMQVSSQPVLPYLRTSGIILAGEDDSGSKINGTGDASVSDSTPSHASFDIGQDYSLPASVQTPSSDGRGQMPRSWPNHHPQYIHNFQGHAFQQTPPYQGYMYPGMQVPSSYYPGNMQWPPNGDRSEMDSHKKKKKKNKKSQVLDHSEEDESTASSDSTYESDSDDNSKQSKKNSSTERLRNKKHGKKSSRKVVIRNINYITSNGDGEKGSITEGSLSNEEEFINGNSLKHKVEEAVASLEKRNKSTSRQHKKQHSEKHHDMLNGSRNADSNGQKGNNNWDAFQNLLLRDDDDSTHDIGKQPMKFQEEYAMSKKFENGRSNEFNHHEADVTKTRVVSNDSFIVAERELDSKGRDRVEYFNEGKDGSTFMQTKKITSEELLLSQRNDESGSYYVSSSARDYLPVEKNKKGILADDSFMIQARPLEYQFNSQTASDISLVSDVVGAAEFTNGTQEGSHKKTDALISHEPDDLLMVLDRDSAVQQNAAPWRMEMDNENNISLYEANKKISDAKTERNLVSNHEGADKKNTGAKSGKISSKEAKSKTPNASKTKSDVMSRSRTLPGSRSTATKSKSEKEEENRKRREELMMQRQKRIAERSALKKTGTETKTSLTSARKGNPKIHPSNGETKKLNKPVLRSSTIDRLATARVTQQKVSPNQANSGPTKKPSLKANKVPLLKKQLQKEVKSSNHKEDVHKTKGKVLSKSSAKTKNEIKASVVLPVKPDATKAVEQNNNNHGLKDIGVLTKASPEKHSRYLTSDREILHENISQLRTDSSLSSHDHALRGNQSRNEVVSDKLSSLHGDNNQPRHNNDMITTSTAALPNKPLIHTAVNSKVNQEIEESNATSPKVSEIQISTPPPSNQAMQESIHNRKKWINDEADSSKVAKGFRKLIFFGRRS*