AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0216490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216490 MtrunA17_Chr2g0318081 93.889 360 16 2 1 360 1 354 0.0 693
Msa0216490 MtrunA17_Chr8g0359921 65.616 349 95 8 3 349 1 326 3.12e-150 426
Msa0216490 MtrunA17_Chr3g0124761 66.279 172 54 2 12 180 3 173 2.97e-78 242
Msa0216490 MtrunA17_Chr2g0318101 64.162 173 49 2 13 172 12 184 1.38e-76 239
Msa0216490 MtrunA17_Chr8g0384721 67.702 161 47 2 14 170 5 164 1.17e-75 235
Msa0216490 MtrunA17_Chr4g0047841 63.388 183 42 3 16 173 15 197 6.46e-75 235
Msa0216490 MtrunA17_Chr3g0130731 66.049 162 51 2 12 170 3 163 9.35e-74 230
Msa0216490 MtrunA17_Chr7g0252971 63.314 169 49 3 13 168 5 173 3.53e-73 230
Msa0216490 MtrunA17_Chr7g0263931 62.130 169 58 3 7 169 2 170 5.72e-71 224
Msa0216490 MtrunA17_Chr4g0042561 63.057 157 54 1 12 164 5 161 1.96e-70 221
Msa0216490 MtrunA17_Chr5g0417791 63.871 155 52 1 14 164 1 155 2.47e-70 220
Msa0216490 MtrunA17_Chr2g0326361 59.756 164 60 2 12 169 10 173 2.05e-68 218
Msa0216490 MtrunA17_Chr2g0309891 55.063 158 68 2 11 165 1 158 1.84e-60 198
Msa0216490 MtrunA17_Chr5g0433781 56.329 158 67 1 11 166 1 158 3.76e-60 204
Msa0216490 MtrunA17_Chr6g0484441 55.769 156 67 1 16 171 5 158 3.70e-59 194
Msa0216490 MtrunA17_Chr3g0091921 55.090 167 73 1 13 177 13 179 2.25e-58 191
Msa0216490 MtrunA17_Chr6g0453451 52.000 175 82 1 6 178 10 184 2.69e-58 191
Msa0216490 MtrunA17_Chr3g0109821 50.262 191 90 3 11 198 1 189 5.48e-58 199
Msa0216490 MtrunA17_Chr4g0060931 53.293 167 76 1 13 177 14 180 1.16e-57 191
Msa0216490 MtrunA17_Chr7g0253011 48.792 207 86 4 14 212 15 209 4.65e-57 190
Msa0216490 MtrunA17_Chr6g0481091 51.592 157 74 1 11 165 1 157 1.05e-56 184
Msa0216490 MtrunA17_Chr5g0417001 52.083 192 80 6 7 187 6 196 1.33e-56 189
Msa0216490 MtrunA17_Chr3g0139331 54.430 158 68 2 15 170 10 165 9.66e-56 186
Msa0216490 MtrunA17_Chr4g0076731 56.051 157 62 3 18 171 56 208 1.83e-55 187
Msa0216490 MtrunA17_Chr4g0017921 55.263 152 62 2 16 164 8 156 1.79e-54 182
Msa0216490 MtrunA17_Chr1g0147421 53.459 159 69 3 15 170 26 182 2.43e-54 182
Msa0216490 MtrunA17_Chr6g0453131 52.469 162 67 2 16 167 15 176 4.30e-54 182
Msa0216490 MtrunA17_Chr5g0405211 44.670 197 101 3 16 206 8 202 4.83e-54 181
Msa0216490 MtrunA17_Chr8g0361731 48.168 191 87 5 18 196 16 206 7.22e-54 182
Msa0216490 MtrunA17_Chr2g0309331 50.595 168 74 4 12 172 6 171 3.59e-53 179
Msa0216490 MtrunA17_Chr2g0316971 55.000 160 60 3 16 167 23 178 5.48e-53 179
Msa0216490 MtrunA17_Chr1g0200561 47.399 173 86 2 16 185 19 189 1.06e-52 178
Msa0216490 MtrunA17_Chr5g0400461 51.786 168 67 4 11 168 1 164 1.66e-52 177
Msa0216490 MtrunA17_Chr8g0372121 48.765 162 78 2 11 169 1 160 2.73e-52 176
Msa0216490 MtrunA17_Chr6g0461661 46.759 216 87 6 14 213 16 219 9.69e-52 176
Msa0216490 MtrunA17_Chr5g0442771 47.150 193 89 3 18 198 20 211 1.11e-51 174
Msa0216490 MtrunA17_Chr4g0018391 50.658 152 70 2 16 164 7 156 1.52e-51 174
Msa0216490 MtrunA17_Chr8g0346001 47.879 165 74 2 12 164 11 175 2.35e-51 176
Msa0216490 MtrunA17_Chr7g0214071 54.658 161 66 3 12 170 11 166 4.49e-51 171
Msa0216490 MtrunA17_Chr4g0054791 44.500 200 105 3 15 209 5 203 4.81e-51 172
Msa0216490 MtrunA17_Chr2g0312321 44.898 196 91 5 11 201 6 189 1.84e-50 171
Msa0216490 MtrunA17_Chr4g0056541 51.316 152 69 2 16 164 7 156 2.26e-50 172
Msa0216490 MtrunA17_Chr7g0217721 38.224 259 136 4 13 255 16 266 3.33e-50 171
Msa0216490 MtrunA17_Chr2g0311661 46.798 203 83 6 18 202 23 218 4.05e-50 169
Msa0216490 MtrunA17_Chr2g0311651 49.133 173 72 4 18 174 24 196 8.88e-49 166
Msa0216490 MtrunA17_Chr5g0398971 50.000 154 70 4 16 164 7 158 1.03e-48 167
Msa0216490 MtrunA17_Chr1g0183741 42.326 215 89 6 3 196 1 201 4.90e-47 160
Msa0216490 MtrunA17_Chr7g0217711 54.264 129 59 0 13 141 16 144 5.48e-47 157
Msa0216490 MtrunA17_Chr5g0428991 50.000 164 77 2 6 164 12 175 1.42e-46 167
Msa0216490 MtrunA17_Chr3g0130101 46.309 149 78 1 18 164 9 157 5.34e-46 160
Msa0216490 MtrunA17_Chr7g0261411 48.148 162 74 3 3 162 1 154 1.06e-45 158
Msa0216490 MtrunA17_Chr3g0128151 48.750 160 80 1 11 168 17 176 1.75e-45 164
Msa0216490 MtrunA17_Chr8g0364791 42.614 176 96 2 11 184 1 173 1.94e-45 161
Msa0216490 MtrunA17_Chr3g0128111 48.052 154 74 3 19 168 45 196 7.10e-45 154
Msa0216490 MtrunA17_Chr1g0201021 45.283 159 85 1 14 170 17 175 8.85e-45 162
Msa0216490 MtrunA17_Chr1g0197351 48.521 169 76 3 15 175 41 206 1.70e-44 159
Msa0216490 MtrunA17_Chr3g0092671 38.889 234 121 6 18 248 7 221 1.99e-44 160
Msa0216490 MtrunA17_Chr4g0038751 49.375 160 72 4 13 169 13 166 2.20e-44 154
Msa0216490 MtrunA17_Chr3g0144271 47.619 168 80 4 1 162 8 173 7.21e-44 156
Msa0216490 MtrunA17_Chr1g0197361 48.718 156 76 3 18 170 10 164 9.55e-44 159
Msa0216490 MtrunA17_Chr8g0384201 41.477 176 98 2 11 184 1 173 1.35e-43 157
Msa0216490 MtrunA17_Chr3g0131911 47.531 162 73 3 16 167 14 173 2.27e-41 145
Msa0216490 MtrunA17_Chr8g0385991 45.000 160 79 3 16 168 14 171 4.61e-41 144
Msa0216490 MtrunA17_Chr2g0321741 46.212 132 62 3 36 166 12 135 2.38e-36 135
Msa0216490 MtrunA17_Chr4g0050701 40.123 162 81 3 16 169 11 164 7.15e-36 129
Msa0216490 MtrunA17_Chr2g0321631 45.570 158 72 5 17 162 5 160 1.18e-35 130
Msa0216490 MtrunA17_Chr8g0345671 46.104 154 66 6 16 161 11 155 6.51e-35 132
Msa0216490 MtrunA17_Chr7g0266701 36.598 194 103 8 16 191 4 195 8.11e-35 128
Msa0216490 MtrunA17_Chr4g0026141 43.038 158 77 6 16 162 5 160 1.48e-33 125
Msa0216490 MtrunA17_Chr3g0113001 44.444 144 74 2 65 205 14 154 1.64e-33 125
Msa0216490 MtrunA17_Chr8g0345691 40.909 154 74 6 16 161 12 156 1.37e-29 117
Msa0216490 MtrunA17_Chr8g0345711 42.537 134 71 4 11 139 7 139 1.92e-28 108
Msa0216490 MtrunA17_Chr8g0345731 41.985 131 69 4 16 139 24 154 1.04e-26 104
Msa0216490 MtrunA17_Chr8g0384351 35.294 204 107 7 12 215 6 184 1.47e-25 101
Msa0216490 MtrunA17_Chr3g0113031 42.748 131 68 4 79 205 3 130 8.51e-25 101
Msa0216490 MtrunA17_Chr8g0345721 35.955 178 72 6 3 139 15 191 2.44e-24 99.0
Msa0216490 MtrunA17_Chr7g0243371 57.317 82 32 2 69 148 17 97 7.81e-23 92.4
Msa0216490 MtrunA17_Chr8g0345701 40.972 144 63 6 15 139 6 146 1.41e-22 93.2
Msa0216490 MtrunA17_Chr8g0345741 36.170 141 75 5 27 162 2 132 2.69e-22 92.0
Msa0216490 MtrunA17_Chr3g0130321 30.952 210 117 6 14 209 5 200 2.19e-21 90.9
Msa0216490 MtrunA17_Chr7g0251661 30.201 149 95 5 12 154 6 151 1.53e-18 81.6
Msa0216490 MtrunA17_Chr7g0251651 32.558 129 81 4 14 139 16 141 4.63e-14 70.1
Msa0216490 MtrunA17_Chr8g0389661 32.895 152 76 5 14 141 45 194 3.86e-12 67.4
Msa0216490 MtrunA17_Chr7g0274971 35.714 154 83 9 22 165 11 158 5.09e-12 64.7
Msa0216490 MtrunA17_Chr3g0113011 50.000 52 26 0 13 64 16 67 2.00e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216490 AT4G27410.2 78.636 220 46 1 3 222 1 219 5.22e-124 359
Msa0216490 AT1G52890.1 57.349 347 115 9 3 347 1 316 7.32e-123 357
Msa0216490 AT4G27410.3 72.996 237 46 2 3 222 1 236 1.76e-119 348
Msa0216490 AT3G15500.1 68.924 251 71 4 3 249 1 248 8.29e-118 344
Msa0216490 AT3G04070.2 62.694 193 57 5 8 187 4 194 1.27e-76 239
Msa0216490 AT1G01720.1 65.341 176 55 3 14 184 5 179 3.18e-76 237
Msa0216490 AT5G63790.1 59.162 191 69 3 12 197 46 232 2.26e-74 233
Msa0216490 AT5G63790.2 59.162 191 69 3 12 197 56 242 3.44e-74 233
Msa0216490 AT5G08790.1 64.072 167 54 2 12 173 3 168 3.61e-74 231
Msa0216490 AT1G61110.1 66.477 176 43 4 16 177 16 189 3.42e-73 230
Msa0216490 AT1G77450.1 65.432 162 52 2 12 170 6 166 6.13e-73 227
Msa0216490 AT3G04070.1 57.895 209 57 6 8 187 4 210 1.03e-72 230
Msa0216490 AT1G69490.1 62.963 162 56 1 12 169 5 166 4.02e-71 223
Msa0216490 AT3G15510.1 64.417 163 45 3 20 169 21 183 6.33e-70 223
Msa0216490 AT3G18400.1 43.388 242 128 3 16 250 5 244 1.03e-62 203
Msa0216490 AT1G52880.1 63.125 160 47 2 20 167 21 180 2.41e-61 199
Msa0216490 AT1G65910.1 48.990 198 96 3 11 204 1 197 4.71e-59 201
Msa0216490 AT5G07680.1 54.706 170 75 1 3 170 4 173 6.83e-59 194
Msa0216490 AT3G17730.1 46.114 193 92 3 11 200 1 184 2.47e-58 189
Msa0216490 AT5G61430.1 45.726 234 108 5 13 227 13 246 3.05e-58 192
Msa0216490 AT2G02450.1 52.874 174 79 2 18 190 53 224 1.09e-57 192
Msa0216490 AT2G02450.2 52.874 174 79 2 18 190 53 224 1.26e-57 193
Msa0216490 AT5G07680.2 49.485 194 96 1 14 205 1 194 1.98e-57 189
Msa0216490 AT2G24430.2 52.299 174 80 2 1 172 1 173 2.32e-57 189
Msa0216490 AT2G24430.1 52.299 174 80 2 1 172 1 173 2.32e-57 189
Msa0216490 AT3G03200.1 48.691 191 91 3 11 198 1 187 5.49e-57 193
Msa0216490 AT5G18270.2 49.505 202 95 4 14 212 19 216 1.51e-56 187
Msa0216490 AT5G17260.1 53.049 164 74 2 11 171 1 164 2.09e-56 191
Msa0216490 AT5G39610.1 49.749 199 84 4 13 197 17 213 6.11e-56 184
Msa0216490 AT1G26870.1 50.811 185 79 4 7 179 7 191 1.03e-55 188
Msa0216490 AT5G18270.1 48.515 202 97 4 14 212 19 216 1.39e-55 185
Msa0216490 AT5G39820.1 49.730 185 68 4 18 177 22 206 9.87e-55 183
Msa0216490 AT2G43000.1 54.194 155 70 1 18 171 20 174 1.25e-54 181
Msa0216490 AT3G04060.1 49.505 202 90 5 14 212 18 210 2.59e-54 182
Msa0216490 AT2G33480.1 57.143 154 63 1 14 167 13 163 6.00e-54 179
Msa0216490 AT4G10350.1 51.974 152 70 1 16 164 9 160 9.31e-54 181
Msa0216490 AT5G53950.1 56.051 157 65 2 16 168 17 173 4.28e-53 180
Msa0216490 AT2G18060.3 48.171 164 80 2 9 169 2 163 5.00e-53 179
Msa0216490 AT2G18060.1 48.171 164 80 2 9 169 2 163 5.00e-53 179
Msa0216490 AT2G33480.2 57.143 154 61 2 14 167 13 161 5.66e-53 176
Msa0216490 AT1G71930.2 42.640 197 103 3 9 197 2 196 7.59e-53 177
Msa0216490 AT1G71930.1 42.640 197 103 3 9 197 2 196 7.59e-53 177
Msa0216490 AT1G33280.1 52.632 152 66 2 16 164 8 156 1.59e-52 176
Msa0216490 AT1G79580.3 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0216490 AT1G79580.5 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0216490 AT1G79580.4 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0216490 AT1G79580.2 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0216490 AT1G79580.1 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0216490 AT1G54330.1 52.866 157 69 2 11 165 1 154 3.11e-52 176
Msa0216490 AT5G46590.1 55.195 154 65 3 16 165 6 159 3.17e-52 175
Msa0216490 AT3G29035.1 53.750 160 72 1 13 170 21 180 5.17e-52 175
Msa0216490 AT5G13180.1 56.604 159 63 4 14 170 12 166 7.01e-52 173
Msa0216490 AT3G15170.1 53.896 154 67 2 16 165 20 173 2.81e-51 173
Msa0216490 AT4G17980.1 53.750 160 60 4 16 165 6 161 3.19e-51 172
Msa0216490 AT4G17980.2 52.121 165 65 4 11 165 1 161 6.01e-51 172
Msa0216490 AT1G32510.1 43.182 220 100 5 16 210 6 225 9.91e-51 171
Msa0216490 AT4G36160.1 51.634 153 69 2 15 164 9 159 1.07e-50 174
Msa0216490 AT4G36160.3 51.634 153 69 2 15 164 9 159 1.07e-50 174
Msa0216490 AT4G36160.2 51.634 153 69 2 15 164 13 163 1.15e-50 174
Msa0216490 AT1G56010.2 46.875 160 81 2 11 166 14 173 1.65e-50 172
Msa0216490 AT1G12260.2 50.641 156 72 2 16 168 7 160 1.88e-50 172
Msa0216490 AT3G12977.1 46.541 159 84 1 11 168 13 171 2.02e-50 170
Msa0216490 AT5G66300.1 50.000 156 74 2 15 167 11 165 2.07e-50 171
Msa0216490 AT1G12260.1 50.641 156 72 2 16 168 7 160 2.61e-50 173
Msa0216490 AT3G10480.2 51.948 154 72 1 15 166 26 179 3.59e-50 174
Msa0216490 AT1G76420.1 48.837 172 77 3 3 164 1 171 4.77e-50 171
Msa0216490 AT5G62380.2 51.974 152 68 2 16 164 7 156 6.43e-50 171
Msa0216490 AT5G62380.1 51.974 152 68 2 16 164 7 156 6.43e-50 171
Msa0216490 AT1G33060.2 48.466 163 82 1 11 171 19 181 1.22e-49 176
Msa0216490 AT1G33060.1 48.466 163 82 1 11 171 19 181 1.32e-49 176
Msa0216490 AT1G32770.1 45.604 182 85 3 12 179 12 193 1.91e-49 170
Msa0216490 AT5G46590.2 56.028 141 59 2 16 153 6 146 2.06e-49 167
Msa0216490 AT1G62700.1 50.641 156 72 2 16 168 7 160 2.26e-49 171
Msa0216490 AT1G62700.2 50.641 156 72 2 16 168 7 160 2.26e-49 171
Msa0216490 AT2G46770.1 41.038 212 106 3 12 204 12 223 7.87e-49 168
Msa0216490 AT3G10480.1 51.613 155 72 2 15 166 26 180 9.88e-49 170
Msa0216490 AT3G10500.1 50.000 158 77 1 15 170 8 165 1.20e-48 172
Msa0216490 AT4G35580.3 45.408 196 99 3 15 208 8 197 1.40e-48 172
Msa0216490 AT4G35580.2 45.408 196 99 3 15 208 8 197 1.52e-48 171
Msa0216490 AT4G35580.1 45.408 196 99 3 15 208 8 197 1.61e-48 171
Msa0216490 AT5G04410.1 50.000 158 77 1 15 170 8 165 4.37e-48 171
Msa0216490 AT5G24590.2 42.929 198 105 3 6 200 3 195 4.47e-48 169
Msa0216490 AT3G10490.1 50.323 155 74 2 15 166 26 180 7.17e-48 162
Msa0216490 AT3G10490.2 50.000 158 70 3 15 166 26 180 4.08e-47 166
Msa0216490 AT3G61910.1 43.478 184 88 3 12 179 7 190 1.44e-46 162
Msa0216490 AT2G17040.1 40.909 220 116 5 18 231 8 219 4.70e-46 159
Msa0216490 AT3G12910.1 41.176 238 106 8 6 214 15 247 4.06e-45 157
Msa0216490 AT3G49530.2 47.134 157 80 2 11 164 8 164 5.65e-45 159
Msa0216490 AT1G34180.3 45.161 155 83 1 18 170 18 172 7.52e-45 160
Msa0216490 AT3G49530.1 47.134 157 80 2 11 164 8 164 1.36e-44 160
Msa0216490 AT2G27300.1 38.009 221 110 5 11 212 9 221 3.19e-44 155
Msa0216490 AT1G34180.1 45.161 155 83 1 18 170 18 172 3.89e-44 160
Msa0216490 AT5G64060.1 44.586 157 85 1 11 165 1 157 4.82e-44 155
Msa0216490 AT1G34190.1 43.871 155 85 1 18 170 18 172 5.02e-44 160
Msa0216490 AT3G10480.3 43.085 188 71 3 15 166 26 213 5.94e-44 159
Msa0216490 AT5G22290.1 41.304 184 92 5 18 194 23 197 9.16e-44 154
Msa0216490 AT1G34180.4 42.515 167 82 1 18 170 18 184 1.61e-42 154
Msa0216490 AT4G28530.1 45.556 180 72 6 3 164 1 172 3.49e-42 150
Msa0216490 AT3G44290.2 43.396 159 78 3 18 171 16 167 3.90e-42 147
Msa0216490 AT1G34180.2 42.515 167 82 1 18 170 18 184 1.01e-41 154
Msa0216490 AT3G44290.1 43.396 159 78 3 18 171 16 167 2.49e-41 148
Msa0216490 AT1G32870.1 50.314 159 73 4 16 170 10 166 5.51e-41 151
Msa0216490 AT5G09330.5 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0216490 AT5G09330.2 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0216490 AT5G09330.4 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0216490 AT5G09330.3 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0216490 AT5G09330.1 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0216490 AT1G32870.2 50.314 159 73 3 16 170 10 166 6.24e-41 150
Msa0216490 AT1G32870.3 50.314 159 73 3 16 170 46 202 1.08e-40 150
Msa0216490 AT5G61430.2 42.857 182 85 5 65 227 2 183 1.69e-35 130
Msa0216490 AT4G10350.2 55.208 96 43 0 69 164 18 113 1.15e-33 126
Msa0216490 AT1G56010.1 51.429 105 48 1 65 166 2 106 1.99e-33 125
Msa0216490 AT5G64530.1 39.306 173 77 4 14 170 1 161 2.84e-33 122
Msa0216490 AT2G33480.3 57.576 99 42 0 69 167 8 106 6.35e-33 122
Msa0216490 AT3G44350.2 40.625 160 84 5 19 169 8 165 8.01e-33 123
Msa0216490 AT3G12977.2 51.429 105 50 1 65 168 14 118 1.83e-32 121
Msa0216490 AT5G22380.1 37.245 196 111 8 19 203 8 202 5.64e-31 117
Msa0216490 AT5G04395.1 42.857 147 66 3 12 141 24 169 1.36e-30 115
Msa0216490 AT5G64530.2 44.697 132 59 3 14 143 1 120 3.45e-30 113
Msa0216490 AT3G44350.1 42.029 138 70 4 16 145 5 140 1.68e-29 111
Msa0216490 AT4G01550.1 37.714 175 90 7 19 184 7 171 1.09e-26 110
Msa0216490 AT3G04420.2 41.732 127 70 2 17 139 4 130 2.30e-26 107
Msa0216490 AT2G43000.2 50.526 95 46 1 78 171 2 96 3.87e-26 103
Msa0216490 AT4G28530.2 35.758 165 51 3 16 164 10 135 5.26e-26 106
Msa0216490 AT3G04420.1 41.732 127 70 2 17 139 4 130 6.03e-26 107
Msa0216490 AT4G01520.1 35.632 174 97 6 17 180 5 173 6.70e-25 103
Msa0216490 AT4G27410.1 62.069 87 32 1 136 222 1 86 1.92e-24 98.6
Msa0216490 AT4G01540.3 36.047 172 95 6 19 180 7 173 2.19e-24 103
Msa0216490 AT4G01540.4 36.047 172 95 6 19 180 7 173 2.62e-24 103
Msa0216490 AT4G01540.1 36.257 171 94 6 19 179 7 172 3.44e-24 103
Msa0216490 AT4G01540.2 36.257 171 94 6 19 179 7 172 3.63e-24 103
Msa0216490 AT1G02230.1 41.538 130 66 5 17 139 4 130 3.10e-23 99.8
Msa0216490 AT1G02250.1 35.503 169 95 5 14 175 1 162 3.34e-22 96.7
Msa0216490 AT1G02220.1 37.692 130 74 3 14 139 1 127 3.76e-21 94.0
Msa0216490 AT3G56530.1 36.601 153 92 4 13 162 49 199 1.54e-20 91.3
Msa0216490 AT3G10490.4 49.367 79 39 1 89 166 2 80 2.78e-20 91.3
Msa0216490 AT3G10490.3 49.367 79 39 1 89 166 2 80 2.78e-20 91.3
Msa0216490 AT2G18060.2 47.368 76 38 1 94 169 2 75 7.96e-19 85.9
Msa0216490 AT5G50820.1 37.226 137 70 5 14 144 15 141 4.08e-18 82.0
Msa0216490 AT3G55210.1 34.161 161 88 5 16 162 11 167 7.64e-18 83.2
Msa0216490 AT1G01010.1 34.146 164 85 8 19 168 6 160 2.41e-17 83.2
Msa0216490 AT5G22290.2 39.623 106 49 4 95 194 2 98 2.83e-17 80.9
Msa0216490 AT5G14000.1 31.646 158 97 4 14 167 13 163 2.40e-16 77.4
Msa0216490 AT5G14000.2 34.615 130 81 2 14 141 13 140 8.52e-16 74.3
Msa0216490 AT3G04430.1 35.606 132 71 5 22 140 6 136 4.27e-12 65.1
Msa0216490 AT4G28500.1 34.641 153 80 6 16 150 59 209 3.04e-11 63.9
Msa0216490 AT4G29230.1 31.210 157 81 5 10 141 42 196 4.98e-11 64.3

Find 117 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAATTGAGTTGAAGATTT+TGG 0.169436 2_1:+62436930 None:intergenic
AATTCTTTGATTGATGATAA+TGG 0.229689 2_1:-62436907 Msa0216490:exon
CTAAAGGCACCAAAACTAAT+TGG 0.246600 2_1:-62436400 Msa0216490:CDS
CCGGTTCAACCGGTTGGATT+TGG 0.265550 2_1:-62435163 Msa0216490:CDS
CCAGATCCAGCTACTCTATT+TGG 0.287866 2_1:+62436518 None:intergenic
TAAATAGGTGGGGATTCTTT+TGG 0.291446 2_1:-62435066 Msa0216490:three_prime_UTR
CTGCTTGAAACGACGCCATT+TGG 0.294519 2_1:+62435694 None:intergenic
ATGCATAATCCAATTAGTTT+TGG 0.307345 2_1:+62436391 None:intergenic
ATTCTTTGATTGATGATAAT+GGG 0.307918 2_1:-62436906 Msa0216490:exon
CTCAATTTCGGCTAGAGATA+TGG 0.309590 2_1:-62435001 Msa0216490:three_prime_UTR
GATTCATCTTCTCTTCTTGT+TGG 0.315390 2_1:+62435533 None:intergenic
TGCTGCAAATAACAATTTCA+TGG 0.318107 2_1:-62435497 Msa0216490:CDS
CTAATCCGGTTGACCCGTTT+GGG 0.322735 2_1:-62435195 Msa0216490:CDS
CATTGATGTGGTTAGCTAAA+AGG 0.330943 2_1:+62434742 None:intergenic
TTGCATTTGTTTGCAATGTT+AGG 0.337412 2_1:-62434791 Msa0216490:three_prime_UTR
CTATTTGGCCTAGTCCCATT+TGG 0.338304 2_1:+62436533 None:intergenic
TTTGGATACTTCCTATCTCT+TGG 0.340923 2_1:+62436551 None:intergenic
CCAAATCCAACCGGTTGAAC+CGG 0.359372 2_1:+62435163 None:intergenic
TGAAGGAACAATAGAATCAT+TGG 0.360300 2_1:-62434923 Msa0216490:three_prime_UTR
ATTGGACACTTCCGTTATTA+CGG 0.370558 2_1:-62435350 Msa0216490:CDS
ACTAATCCGGTTGACCCGTT+TGG 0.373818 2_1:-62435196 Msa0216490:CDS
GAAACGACGCCATTTGGAAT+AGG 0.376235 2_1:+62435700 None:intergenic
CCAAATAGAGTAGCTGGATC+TGG 0.382299 2_1:-62436518 Msa0216490:CDS
TTGTTTGCAATGTTAGGCTT+TGG 0.386740 2_1:-62434785 Msa0216490:three_prime_UTR
CTTCCTATCCGGTTCATTGT+TGG 0.391276 2_1:+62435137 None:intergenic
TGTCCCCACATTATGTCAAT+TGG 0.393100 2_1:-62435368 Msa0216490:CDS
TTGAATTGCAGCTAGATGAT+TGG 0.399386 2_1:-62435765 Msa0216490:intron
TGAATTGCAGCTAGATGATT+GGG 0.406156 2_1:-62435764 Msa0216490:intron
GAAGGAACAATAGAATCATT+GGG 0.409016 2_1:-62434922 Msa0216490:three_prime_UTR
ACAAATGAAGGTAGAAAAGT+TGG 0.415542 2_1:-62436461 Msa0216490:CDS
ATTTCTTTAGTCCAAGAGAT+AGG 0.426397 2_1:-62436562 Msa0216490:CDS
AATCAAGTTGAGAATTCGTC+TGG 0.427256 2_1:-62435265 Msa0216490:CDS
CTAAACCCAAACGGGTCAAC+CGG 0.428969 2_1:+62435190 None:intergenic
CAAATAACAATTTCATGGAT+TGG 0.437272 2_1:-62435492 Msa0216490:CDS
CCCGTTTGGGTTTAGATACC+CGG 0.440772 2_1:-62435182 Msa0216490:CDS
TTTCCTTCTAACTTCCTATC+CGG 0.448826 2_1:+62435126 None:intergenic
GAGTAGCTGGATCTGGGTAT+TGG 0.458403 2_1:-62436511 Msa0216490:CDS
GAACCGGATAGGAAGTTAGA+AGG 0.460954 2_1:-62435129 Msa0216490:three_prime_UTR
GCCTAACAAAATTAGAAAAG+TGG 0.463768 2_1:-62435044 Msa0216490:three_prime_UTR
GTTTAGATACCCGGTTCAAC+CGG 0.466337 2_1:-62435173 Msa0216490:CDS
AGAGATAGGAAGTATCCAAA+TGG 0.473419 2_1:-62436548 Msa0216490:CDS
TTTGGATTCCAACAATGAAC+CGG 0.476582 2_1:-62435145 Msa0216490:exon
TTCTCAATAAACGGTAGACA+TGG 0.477440 2_1:+62437052 None:intergenic
TATGTTGGTAAAGCTCCTAA+AGG 0.483857 2_1:-62436416 Msa0216490:CDS
ACTAGGCCAAATAGAGTAGC+TGG 0.487807 2_1:-62436524 Msa0216490:CDS
TGGGGACAGAAGGGACATAA+AGG 0.491862 2_1:+62435383 None:intergenic
AAGCAATGGTCGTCAATTTG+TGG 0.495194 2_1:+62435598 None:intergenic
AACAAGAAGCTCTTCATCAG+TGG 0.495470 2_1:+62436824 None:intergenic
TATAGCTAGGTTGTAGAAGA+AGG 0.495780 2_1:+62436957 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.496775 2_1:-62436740 Msa0216490:CDS
CCGGGTATCTAAACCCAAAC+GGG 0.497333 2_1:+62435182 None:intergenic
AATGTGCATGTGGTGTAAAT+AGG 0.498122 2_1:-62435081 Msa0216490:three_prime_UTR
ACATTCTATGAATCTATCCA+TGG 0.501104 2_1:-62434963 Msa0216490:three_prime_UTR
ACCGGGTATCTAAACCCAAA+CGG 0.506194 2_1:+62435181 None:intergenic
TTCACTACTTTATCTCCCCA+TGG 0.509914 2_1:+62434946 None:intergenic
GACAAGATTATAACAAATGA+AGG 0.510810 2_1:-62436473 Msa0216490:CDS
TATAATCTTGTCTGTTCCAG+TGG 0.510918 2_1:+62436484 None:intergenic
TGACATAATGTGGGGACAGA+AGG 0.514449 2_1:+62435373 None:intergenic
CAAATAGAGTAGCTGGATCT+GGG 0.514453 2_1:-62436517 Msa0216490:CDS
TGTTGGAATCCAAATCCAAC+CGG 0.518411 2_1:+62435154 None:intergenic
TATCTATGTCGTAAAGTAGC+TGG 0.519439 2_1:-62436798 Msa0216490:CDS
CAAATCCAACCGGTTGAACC+GGG 0.522706 2_1:+62435164 None:intergenic
AGTGTCCAATTGACATAATG+TGG 0.525796 2_1:+62435363 None:intergenic
AACTTACTTGGAAGAACCCA+TGG 0.526899 2_1:+62436723 None:intergenic
GGAAGTATCCAAATGGGACT+AGG 0.531933 2_1:-62436541 Msa0216490:CDS
GAGATAGGAAGTATCCAAAT+GGG 0.536430 2_1:-62436547 Msa0216490:CDS
TGCATGTGGTGTAAATAGGT+GGG 0.539156 2_1:-62435077 Msa0216490:three_prime_UTR
CGTTGTTTCGTGAAGAGTCA+AGG 0.544493 2_1:+62436357 None:intergenic
AGGAATGGGATACACTAATC+CGG 0.545779 2_1:-62435209 Msa0216490:CDS
CTTTGAACCTCCTCTTCAGT+CGG 0.546459 2_1:+62435301 None:intergenic
TCTGGGTATTGGAAAGCCAC+TGG 0.550772 2_1:-62436500 Msa0216490:CDS
CACGTGGCAGCTTGAAGCAA+TGG 0.554810 2_1:+62435584 None:intergenic
CATTCTATGAATCTATCCAT+GGG 0.556174 2_1:-62434962 Msa0216490:three_prime_UTR
CATATCTCTAGCCGAAATTG+AGG 0.556183 2_1:+62435002 None:intergenic
GCACAATTGAGTTTACCTCC+TGG 0.560444 2_1:-62436861 Msa0216490:CDS
CTCCTCTTCAGTCGGATGCA+CGG 0.564978 2_1:+62435309 None:intergenic
GGAGATAAAGTAGTGAATGA+AGG 0.566636 2_1:-62434940 Msa0216490:three_prime_UTR
TCTCAATAAACGGTAGACAT+GGG 0.567264 2_1:+62437053 None:intergenic
ACAAGAAGCTCTTCATCAGT+GGG 0.569952 2_1:+62436825 None:intergenic
AGATACCCGGTTCAACCGGT+TGG 0.574244 2_1:-62435169 Msa0216490:CDS
CTCAATAAACGGTAGACATG+GGG 0.578042 2_1:+62437054 None:intergenic
GACATAATGTGGGGACAGAA+GGG 0.579791 2_1:+62435374 None:intergenic
TTTCAAGACGGTCAAACTCA+AGG 0.582786 2_1:-62435433 Msa0216490:CDS
GGTAAACTCAATTGTGCAAG+AGG 0.592070 2_1:+62436867 None:intergenic
TTCAAGAACATCGTCGAGGT+GGG 0.595939 2_1:+62435627 None:intergenic
ATTCAAGAACATCGTCGAGG+TGG 0.599629 2_1:+62435626 None:intergenic
GTGCATGTGGTGTAAATAGG+TGG 0.600948 2_1:-62435078 Msa0216490:three_prime_UTR
CTGAAGAGGAGGTTCAAAGT+GGG 0.606883 2_1:-62435297 Msa0216490:CDS
TCTCTACAAATTCGACCCAT+GGG 0.608644 2_1:-62436739 Msa0216490:CDS
GTGTCCAATTGACATAATGT+GGG 0.609196 2_1:+62435364 None:intergenic
ACGTGTCAACTCGCTAAGAA+CGG 0.615896 2_1:-62435566 Msa0216490:CDS
ATTCCAACAATGAACCGGAT+AGG 0.618682 2_1:-62435140 Msa0216490:exon
GTGGGGTAAAATCGAAAACC+AGG 0.620046 2_1:+62436843 None:intergenic
CGTGCATCCGACTGAAGAGG+AGG 0.623916 2_1:-62435308 Msa0216490:CDS
AGCTAGGTTGTAGAAGAAGG+TGG 0.626028 2_1:+62436960 None:intergenic
ATCCGTGCATCCGACTGAAG+AGG 0.627654 2_1:-62435311 Msa0216490:CDS
ACTGAAGAGGAGGTTCAAAG+TGG 0.641217 2_1:-62435298 Msa0216490:CDS
GCATGTGGTGTAAATAGGTG+GGG 0.645640 2_1:-62435076 Msa0216490:three_prime_UTR
CTTGACTCTTCACGAAACAA+CGG 0.657327 2_1:-62436356 Msa0216490:CDS
AATTTCGGCTAGAGATATGG+AGG 0.657514 2_1:-62434998 Msa0216490:three_prime_UTR
GACTCTTCACGAAACAACGG+TGG 0.660789 2_1:-62436353 Msa0216490:CDS
AGAACAAAACGTGATTCATG+TGG 0.661850 2_1:+62434837 None:intergenic
GTTCTTAGCGAGTTGACACG+TGG 0.662417 2_1:+62435568 None:intergenic
TGAAGAGGAGGTTCAAAGTG+GGG 0.669043 2_1:-62435296 Msa0216490:CDS
GAATACACTCAATACAGCAA+CGG 0.669213 2_1:-62435670 Msa0216490:CDS
AAGGAACAATAGAATCATTG+GGG 0.673740 2_1:-62434921 Msa0216490:three_prime_UTR
GTGATATTTATAGTAACACA+TGG 0.678782 2_1:+62437076 None:intergenic
ACAGTAACAGGGTTTCAAGA+CGG 0.683973 2_1:-62435445 Msa0216490:CDS
ACGAAACAACGGTGGCACCA+AGG 0.687136 2_1:-62436345 Msa0216490:intron
TGTAATAGTCAATGTGCATG+TGG 0.690930 2_1:-62435091 Msa0216490:three_prime_UTR
ACTTACTTGGAAGAACCCAT+GGG 0.692202 2_1:+62436724 None:intergenic
TGTCCAATTGACATAATGTG+GGG 0.696814 2_1:+62435365 None:intergenic
ATGTGGCTAAAAGCATACGT+TGG 0.727053 2_1:+62434854 None:intergenic
ATTCTATGAATCTATCCATG+GGG 0.736638 2_1:-62434961 Msa0216490:three_prime_UTR
GTGATTCAAGAACATCGTCG+AGG 0.740584 2_1:+62435623 None:intergenic
GGGTAAAATCGAAAACCAGG+AGG 0.741080 2_1:+62436846 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.743838 2_1:+62436826 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTTTTCTCAATAAA+CGG + chr2_1:62434735-62434754 None:intergenic 15.0%
!! CTTTAATATGAATAAAACAT+AGG + chr2_1:62435140-62435159 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2_1:62435571-62435590 Msa0216490:CDS 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2_1:62435836-62435855 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG + chr2_1:62435868-62435887 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG + chr2_1:62435895-62435914 None:intergenic 15.0%
!!! TTTTCTTTTTTCTCAATAAA+CGG + chr2_1:62434735-62434754 None:intergenic 15.0%
!! CTTTAATATGAATAAAACAT+AGG + chr2_1:62435140-62435159 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2_1:62435571-62435590 Msa0216490:CDS 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2_1:62435836-62435855 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG + chr2_1:62435868-62435887 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG + chr2_1:62435895-62435914 None:intergenic 15.0%
!!! AATAATTGAGTTGAAGATTT+TGG + chr2_1:62434848-62434867 None:intergenic 20.0%
!!! AATTCTTTGATTGATGATAA+TGG - chr2_1:62434868-62434887 Msa0216490:three_prime_UTR 20.0%
!!! ATTCTTTGATTGATGATAAT+GGG - chr2_1:62434869-62434888 Msa0216490:three_prime_UTR 20.0%
!! AATGAATGTATATAATACCT+TGG + chr2_1:62435450-62435469 None:intergenic 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2_1:62435696-62435715 Msa0216490:CDS 20.0%
!!! GATTGAACAACAAAATTTTT+AGG + chr2_1:62435780-62435799 None:intergenic 20.0%
!! AAATAAATAATATGGTGACA+AGG + chr2_1:62435860-62435879 None:intergenic 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2_1:62435904-62435923 None:intergenic 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2_1:62435942-62435961 Msa0216490:intron 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2_1:62435943-62435962 Msa0216490:intron 20.0%
!! AATTATCCCATAAAACAATT+TGG + chr2_1:62435952-62435971 None:intergenic 20.0%
!!! AGTGGAAAAAAATTGAATTT+TGG - chr2_1:62436749-62436768 Msa0216490:CDS 20.0%
!!! AATAATTGAGTTGAAGATTT+TGG + chr2_1:62434848-62434867 None:intergenic 20.0%
!!! AATTCTTTGATTGATGATAA+TGG - chr2_1:62434868-62434887 Msa0216490:three_prime_UTR 20.0%
!!! ATTCTTTGATTGATGATAAT+GGG - chr2_1:62434869-62434888 Msa0216490:three_prime_UTR 20.0%
!! AATGAATGTATATAATACCT+TGG + chr2_1:62435450-62435469 None:intergenic 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2_1:62435696-62435715 Msa0216490:CDS 20.0%
!!! GATTGAACAACAAAATTTTT+AGG + chr2_1:62435780-62435799 None:intergenic 20.0%
!! AAATAAATAATATGGTGACA+AGG + chr2_1:62435860-62435879 None:intergenic 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2_1:62435904-62435923 None:intergenic 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2_1:62435942-62435961 Msa0216490:intron 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2_1:62435943-62435962 Msa0216490:intron 20.0%
!! AATTATCCCATAAAACAATT+TGG + chr2_1:62435952-62435971 None:intergenic 20.0%
!!! AGTGGAAAAAAATTGAATTT+TGG - chr2_1:62436749-62436768 Msa0216490:CDS 20.0%
! GTGATATTTATAGTAACACA+TGG + chr2_1:62434702-62434721 None:intergenic 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2_1:62435302-62435321 Msa0216490:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2_1:62435344-62435363 Msa0216490:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2_1:62435387-62435406 None:intergenic 25.0%
! TTAAAAAATTGGGTGATACA+TGG - chr2_1:62435645-62435664 Msa0216490:CDS 25.0%
! CAATTTGGTAAAACAGTAAA+AGG + chr2_1:62435937-62435956 None:intergenic 25.0%
! CAAATAACAATTTCATGGAT+TGG - chr2_1:62436283-62436302 Msa0216490:intron 25.0%
!!! AAGGAATGATGAATTTTAGT+GGG - chr2_1:62436361-62436380 Msa0216490:CDS 25.0%
!! AAATGATTTTACTCAAGGAA+TGG - chr2_1:62436551-62436570 Msa0216490:CDS 25.0%
!! AATGATTTTACTCAAGGAAT+GGG - chr2_1:62436552-62436571 Msa0216490:CDS 25.0%
!!! TCCACTTTTCTAATTTTGTT+AGG + chr2_1:62436735-62436754 None:intergenic 25.0%
!! GATTAGAATCATGTAGTTTT+TGG - chr2_1:62436893-62436912 Msa0216490:CDS 25.0%
! GTGATATTTATAGTAACACA+TGG + chr2_1:62434702-62434721 None:intergenic 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2_1:62435302-62435321 Msa0216490:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2_1:62435344-62435363 Msa0216490:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2_1:62435387-62435406 None:intergenic 25.0%
! TTAAAAAATTGGGTGATACA+TGG - chr2_1:62435645-62435664 Msa0216490:CDS 25.0%
! CAATTTGGTAAAACAGTAAA+AGG + chr2_1:62435937-62435956 None:intergenic 25.0%
! CAAATAACAATTTCATGGAT+TGG - chr2_1:62436283-62436302 Msa0216490:intron 25.0%
!!! AAGGAATGATGAATTTTAGT+GGG - chr2_1:62436361-62436380 Msa0216490:CDS 25.0%
!! AAATGATTTTACTCAAGGAA+TGG - chr2_1:62436551-62436570 Msa0216490:CDS 25.0%
!! AATGATTTTACTCAAGGAAT+GGG - chr2_1:62436552-62436571 Msa0216490:CDS 25.0%
!!! TCCACTTTTCTAATTTTGTT+AGG + chr2_1:62436735-62436754 None:intergenic 25.0%
!! GATTAGAATCATGTAGTTTT+TGG - chr2_1:62436893-62436912 Msa0216490:CDS 25.0%
!! AGATTTTGGTGATTATAGCT+AGG + chr2_1:62434834-62434853 None:intergenic 30.0%
CGTTGTGAAATTAACTTACT+TGG + chr2_1:62435067-62435086 None:intergenic 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2_1:62435161-62435180 Msa0216490:CDS 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2_1:62435166-62435185 Msa0216490:CDS 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG - chr2_1:62435189-62435208 Msa0216490:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2_1:62435213-62435232 Msa0216490:CDS 30.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2_1:62435314-62435333 Msa0216490:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2_1:62435590-62435609 Msa0216490:CDS 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2_1:62435829-62435848 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2_1:62435830-62435849 None:intergenic 30.0%
TGCTGCAAATAACAATTTCA+TGG - chr2_1:62436278-62436297 Msa0216490:intron 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2_1:62436360-62436379 Msa0216490:CDS 30.0%
! GGTTCAAATGATTTTACTCA+AGG - chr2_1:62436546-62436565 Msa0216490:CDS 30.0%
GCCTAACAAAATTAGAAAAG+TGG - chr2_1:62436731-62436750 Msa0216490:CDS 30.0%
!! TGAATTTTGGTCCTCAATTT+CGG - chr2_1:62436762-62436781 Msa0216490:CDS 30.0%
ACATTCTATGAATCTATCCA+TGG - chr2_1:62436812-62436831 Msa0216490:CDS 30.0%
CATTCTATGAATCTATCCAT+GGG - chr2_1:62436813-62436832 Msa0216490:CDS 30.0%
ATTCTATGAATCTATCCATG+GGG - chr2_1:62436814-62436833 Msa0216490:CDS 30.0%
TGAAGGAACAATAGAATCAT+TGG - chr2_1:62436852-62436871 Msa0216490:CDS 30.0%
GAAGGAACAATAGAATCATT+GGG - chr2_1:62436853-62436872 Msa0216490:CDS 30.0%
AAGGAACAATAGAATCATTG+GGG - chr2_1:62436854-62436873 Msa0216490:CDS 30.0%
TTGCATTTGTTTGCAATGTT+AGG - chr2_1:62436984-62437003 Msa0216490:five_prime_UTR 30.0%
!!! ACTTTTATGTAGCATTGATG+TGG + chr2_1:62437048-62437067 None:intergenic 30.0%
!! AGATTTTGGTGATTATAGCT+AGG + chr2_1:62434834-62434853 None:intergenic 30.0%
CGTTGTGAAATTAACTTACT+TGG + chr2_1:62435067-62435086 None:intergenic 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2_1:62435161-62435180 Msa0216490:CDS 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2_1:62435166-62435185 Msa0216490:CDS 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG - chr2_1:62435189-62435208 Msa0216490:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2_1:62435213-62435232 Msa0216490:CDS 30.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2_1:62435314-62435333 Msa0216490:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2_1:62435590-62435609 Msa0216490:CDS 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2_1:62435829-62435848 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2_1:62435830-62435849 None:intergenic 30.0%
TGCTGCAAATAACAATTTCA+TGG - chr2_1:62436278-62436297 Msa0216490:intron 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2_1:62436360-62436379 Msa0216490:CDS 30.0%
! GGTTCAAATGATTTTACTCA+AGG - chr2_1:62436546-62436565 Msa0216490:CDS 30.0%
GCCTAACAAAATTAGAAAAG+TGG - chr2_1:62436731-62436750 Msa0216490:CDS 30.0%
!! TGAATTTTGGTCCTCAATTT+CGG - chr2_1:62436762-62436781 Msa0216490:CDS 30.0%
ACATTCTATGAATCTATCCA+TGG - chr2_1:62436812-62436831 Msa0216490:CDS 30.0%
CATTCTATGAATCTATCCAT+GGG - chr2_1:62436813-62436832 Msa0216490:CDS 30.0%
ATTCTATGAATCTATCCATG+GGG - chr2_1:62436814-62436833 Msa0216490:CDS 30.0%
TGAAGGAACAATAGAATCAT+TGG - chr2_1:62436852-62436871 Msa0216490:CDS 30.0%
GAAGGAACAATAGAATCATT+GGG - chr2_1:62436853-62436872 Msa0216490:CDS 30.0%
AAGGAACAATAGAATCATTG+GGG - chr2_1:62436854-62436873 Msa0216490:CDS 30.0%
TTGCATTTGTTTGCAATGTT+AGG - chr2_1:62436984-62437003 Msa0216490:five_prime_UTR 30.0%
!!! ACTTTTATGTAGCATTGATG+TGG + chr2_1:62437048-62437067 None:intergenic 30.0%
TCTCAATAAACGGTAGACAT+GGG + chr2_1:62434725-62434744 None:intergenic 35.0%
TTCTCAATAAACGGTAGACA+TGG + chr2_1:62434726-62434745 None:intergenic 35.0%
TATAGCTAGGTTGTAGAAGA+AGG + chr2_1:62434821-62434840 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2_1:62434977-62434996 Msa0216490:three_prime_UTR 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2_1:62435176-62435195 Msa0216490:CDS 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2_1:62435227-62435246 None:intergenic 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2_1:62435227-62435246 Msa0216490:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2_1:62435228-62435247 Msa0216490:CDS 35.0%
TATAATCTTGTCTGTTCCAG+TGG + chr2_1:62435294-62435313 None:intergenic 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2_1:62435359-62435378 Msa0216490:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2_1:62435377-62435396 None:intergenic 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2_1:62435375-62435394 Msa0216490:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2_1:62435589-62435608 Msa0216490:CDS 35.0%
CAGTAAAAGGTCAAAAACAG+AGG + chr2_1:62435924-62435943 None:intergenic 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2_1:62436010-62436029 Msa0216490:intron 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2_1:62436011-62436030 Msa0216490:intron 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2_1:62436066-62436085 Msa0216490:intron 35.0%
GAATACACTCAATACAGCAA+CGG - chr2_1:62436105-62436124 Msa0216490:intron 35.0%
GATTCATCTTCTCTTCTTGT+TGG + chr2_1:62436245-62436264 None:intergenic 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2_1:62436318-62436337 Msa0216490:intron 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2_1:62436319-62436338 Msa0216490:intron 35.0%
TGTCCAATTGACATAATGTG+GGG + chr2_1:62436413-62436432 None:intergenic 35.0%
GTGTCCAATTGACATAATGT+GGG + chr2_1:62436414-62436433 None:intergenic 35.0%
AGTGTCCAATTGACATAATG+TGG + chr2_1:62436415-62436434 None:intergenic 35.0%
ATTGGACACTTCCGTTATTA+CGG - chr2_1:62436425-62436444 Msa0216490:CDS 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG + chr2_1:62436439-62436458 None:intergenic 35.0%
!! AATCAAGTTGAGAATTCGTC+TGG - chr2_1:62436510-62436529 Msa0216490:CDS 35.0%
TTTGGATTCCAACAATGAAC+CGG - chr2_1:62436630-62436649 Msa0216490:intron 35.0%
TTTCCTTCTAACTTCCTATC+CGG + chr2_1:62436652-62436671 None:intergenic 35.0%
TGTAATAGTCAATGTGCATG+TGG - chr2_1:62436684-62436703 Msa0216490:intron 35.0%
AATGTGCATGTGGTGTAAAT+AGG - chr2_1:62436694-62436713 Msa0216490:intron 35.0%
! TAAATAGGTGGGGATTCTTT+TGG - chr2_1:62436709-62436728 Msa0216490:intron 35.0%
GGAGATAAAGTAGTGAATGA+AGG - chr2_1:62436835-62436854 Msa0216490:CDS 35.0%
AGAACAAAACGTGATTCATG+TGG + chr2_1:62436941-62436960 None:intergenic 35.0%
TTGTTTGCAATGTTAGGCTT+TGG - chr2_1:62436990-62437009 Msa0216490:five_prime_UTR 35.0%
! CATTGATGTGGTTAGCTAAA+AGG + chr2_1:62437036-62437055 None:intergenic 35.0%
TCTCAATAAACGGTAGACAT+GGG + chr2_1:62434725-62434744 None:intergenic 35.0%
TTCTCAATAAACGGTAGACA+TGG + chr2_1:62434726-62434745 None:intergenic 35.0%
TATAGCTAGGTTGTAGAAGA+AGG + chr2_1:62434821-62434840 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2_1:62434977-62434996 Msa0216490:three_prime_UTR 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2_1:62435176-62435195 Msa0216490:CDS 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2_1:62435227-62435246 None:intergenic 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2_1:62435227-62435246 Msa0216490:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2_1:62435228-62435247 Msa0216490:CDS 35.0%
TATAATCTTGTCTGTTCCAG+TGG + chr2_1:62435294-62435313 None:intergenic 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2_1:62435359-62435378 Msa0216490:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2_1:62435377-62435396 None:intergenic 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2_1:62435375-62435394 Msa0216490:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2_1:62435589-62435608 Msa0216490:CDS 35.0%
CAGTAAAAGGTCAAAAACAG+AGG + chr2_1:62435924-62435943 None:intergenic 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2_1:62436010-62436029 Msa0216490:intron 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2_1:62436011-62436030 Msa0216490:intron 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2_1:62436066-62436085 Msa0216490:intron 35.0%
GAATACACTCAATACAGCAA+CGG - chr2_1:62436105-62436124 Msa0216490:intron 35.0%
GATTCATCTTCTCTTCTTGT+TGG + chr2_1:62436245-62436264 None:intergenic 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2_1:62436318-62436337 Msa0216490:intron 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2_1:62436319-62436338 Msa0216490:intron 35.0%
TGTCCAATTGACATAATGTG+GGG + chr2_1:62436413-62436432 None:intergenic 35.0%
GTGTCCAATTGACATAATGT+GGG + chr2_1:62436414-62436433 None:intergenic 35.0%
AGTGTCCAATTGACATAATG+TGG + chr2_1:62436415-62436434 None:intergenic 35.0%
ATTGGACACTTCCGTTATTA+CGG - chr2_1:62436425-62436444 Msa0216490:CDS 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG + chr2_1:62436439-62436458 None:intergenic 35.0%
!! AATCAAGTTGAGAATTCGTC+TGG - chr2_1:62436510-62436529 Msa0216490:CDS 35.0%
TTTGGATTCCAACAATGAAC+CGG - chr2_1:62436630-62436649 Msa0216490:intron 35.0%
TTTCCTTCTAACTTCCTATC+CGG + chr2_1:62436652-62436671 None:intergenic 35.0%
TGTAATAGTCAATGTGCATG+TGG - chr2_1:62436684-62436703 Msa0216490:intron 35.0%
AATGTGCATGTGGTGTAAAT+AGG - chr2_1:62436694-62436713 Msa0216490:intron 35.0%
! TAAATAGGTGGGGATTCTTT+TGG - chr2_1:62436709-62436728 Msa0216490:intron 35.0%
GGAGATAAAGTAGTGAATGA+AGG - chr2_1:62436835-62436854 Msa0216490:CDS 35.0%
AGAACAAAACGTGATTCATG+TGG + chr2_1:62436941-62436960 None:intergenic 35.0%
TTGTTTGCAATGTTAGGCTT+TGG - chr2_1:62436990-62437009 Msa0216490:five_prime_UTR 35.0%
! CATTGATGTGGTTAGCTAAA+AGG + chr2_1:62437036-62437055 None:intergenic 35.0%
CTCAATAAACGGTAGACATG+GGG + chr2_1:62434724-62434743 None:intergenic 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2_1:62434911-62434930 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2_1:62434953-62434972 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2_1:62434954-62434973 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr2_1:62435035-62435054 Msa0216490:three_prime_UTR 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr2_1:62435036-62435055 Msa0216490:three_prime_UTR 40.0%
ACTTACTTGGAAGAACCCAT+GGG + chr2_1:62435054-62435073 None:intergenic 40.0%
AACTTACTTGGAAGAACCCA+TGG + chr2_1:62435055-62435074 None:intergenic 40.0%
CAAATAGAGTAGCTGGATCT+GGG - chr2_1:62435258-62435277 Msa0216490:CDS 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2_1:62435419-62435438 Msa0216490:CDS 40.0%
AAGCAATGGTCGTCAATTTG+TGG + chr2_1:62436180-62436199 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2_1:62436330-62436349 Msa0216490:intron 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2_1:62436342-62436361 Msa0216490:intron 40.0%
TGTCCCCACATTATGTCAAT+TGG - chr2_1:62436407-62436426 Msa0216490:CDS 40.0%
!!! TCGTCTGGATTTTTTCAACG+CGG - chr2_1:62436525-62436544 Msa0216490:CDS 40.0%
AGGAATGGGATACACTAATC+CGG - chr2_1:62436566-62436585 Msa0216490:CDS 40.0%
TGTTGGAATCCAAATCCAAC+CGG + chr2_1:62436624-62436643 None:intergenic 40.0%
ATTCCAACAATGAACCGGAT+AGG - chr2_1:62436635-62436654 Msa0216490:intron 40.0%
TGCATGTGGTGTAAATAGGT+GGG - chr2_1:62436698-62436717 Msa0216490:intron 40.0%
CATATCTCTAGCCGAAATTG+AGG + chr2_1:62436776-62436795 None:intergenic 40.0%
CTCAATTTCGGCTAGAGATA+TGG - chr2_1:62436774-62436793 Msa0216490:CDS 40.0%
AATTTCGGCTAGAGATATGG+AGG - chr2_1:62436777-62436796 Msa0216490:CDS 40.0%
TTCACTACTTTATCTCCCCA+TGG + chr2_1:62436832-62436851 None:intergenic 40.0%
! ATGTGGCTAAAAGCATACGT+TGG + chr2_1:62436924-62436943 None:intergenic 40.0%
CTCAATAAACGGTAGACATG+GGG + chr2_1:62434724-62434743 None:intergenic 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2_1:62434911-62434930 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2_1:62434953-62434972 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2_1:62434954-62434973 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr2_1:62435035-62435054 Msa0216490:three_prime_UTR 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr2_1:62435036-62435055 Msa0216490:three_prime_UTR 40.0%
ACTTACTTGGAAGAACCCAT+GGG + chr2_1:62435054-62435073 None:intergenic 40.0%
AACTTACTTGGAAGAACCCA+TGG + chr2_1:62435055-62435074 None:intergenic 40.0%
CAAATAGAGTAGCTGGATCT+GGG - chr2_1:62435258-62435277 Msa0216490:CDS 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2_1:62435419-62435438 Msa0216490:CDS 40.0%
AAGCAATGGTCGTCAATTTG+TGG + chr2_1:62436180-62436199 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2_1:62436330-62436349 Msa0216490:intron 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2_1:62436342-62436361 Msa0216490:intron 40.0%
TGTCCCCACATTATGTCAAT+TGG - chr2_1:62436407-62436426 Msa0216490:CDS 40.0%
!!! TCGTCTGGATTTTTTCAACG+CGG - chr2_1:62436525-62436544 Msa0216490:CDS 40.0%
AGGAATGGGATACACTAATC+CGG - chr2_1:62436566-62436585 Msa0216490:CDS 40.0%
TGTTGGAATCCAAATCCAAC+CGG + chr2_1:62436624-62436643 None:intergenic 40.0%
ATTCCAACAATGAACCGGAT+AGG - chr2_1:62436635-62436654 Msa0216490:intron 40.0%
TGCATGTGGTGTAAATAGGT+GGG - chr2_1:62436698-62436717 Msa0216490:intron 40.0%
CATATCTCTAGCCGAAATTG+AGG + chr2_1:62436776-62436795 None:intergenic 40.0%
CTCAATTTCGGCTAGAGATA+TGG - chr2_1:62436774-62436793 Msa0216490:CDS 40.0%
AATTTCGGCTAGAGATATGG+AGG - chr2_1:62436777-62436796 Msa0216490:CDS 40.0%
TTCACTACTTTATCTCCCCA+TGG + chr2_1:62436832-62436851 None:intergenic 40.0%
! ATGTGGCTAAAAGCATACGT+TGG + chr2_1:62436924-62436943 None:intergenic 40.0%
AGCTAGGTTGTAGAAGAAGG+TGG + chr2_1:62434818-62434837 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2_1:62434914-62434933 Msa0216490:three_prime_UTR 45.0%
GGGTAAAATCGAAAACCAGG+AGG + chr2_1:62434932-62434951 None:intergenic 45.0%
GTGGGGTAAAATCGAAAACC+AGG + chr2_1:62434935-62434954 None:intergenic 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2_1:62434952-62434971 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG - chr2_1:62435234-62435253 Msa0216490:CDS 45.0%
CTATTTGGCCTAGTCCCATT+TGG + chr2_1:62435245-62435264 None:intergenic 45.0%
ACTAGGCCAAATAGAGTAGC+TGG - chr2_1:62435251-62435270 Msa0216490:CDS 45.0%
CCAGATCCAGCTACTCTATT+TGG + chr2_1:62435260-62435279 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG - chr2_1:62435257-62435276 Msa0216490:CDS 45.0%
! CGTTGTTTCGTGAAGAGTCA+AGG + chr2_1:62435421-62435440 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2_1:62436078-62436097 None:intergenic 45.0%
TTCAAGAACATCGTCGAGGT+GGG + chr2_1:62436151-62436170 None:intergenic 45.0%
ATTCAAGAACATCGTCGAGG+TGG + chr2_1:62436152-62436171 None:intergenic 45.0%
GTGATTCAAGAACATCGTCG+AGG + chr2_1:62436155-62436174 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2_1:62436209-62436228 Msa0216490:intron 45.0%
GACATAATGTGGGGACAGAA+GGG + chr2_1:62436404-62436423 None:intergenic 45.0%
TGACATAATGTGGGGACAGA+AGG + chr2_1:62436405-62436424 None:intergenic 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2_1:62436477-62436496 None:intergenic 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2_1:62436477-62436496 Msa0216490:CDS 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2_1:62436478-62436497 Msa0216490:CDS 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2_1:62436479-62436498 Msa0216490:CDS 45.0%
ACCGGGTATCTAAACCCAAA+CGG + chr2_1:62436597-62436616 None:intergenic 45.0%
GTTTAGATACCCGGTTCAAC+CGG - chr2_1:62436602-62436621 Msa0216490:intron 45.0%
CTTCCTATCCGGTTCATTGT+TGG + chr2_1:62436641-62436660 None:intergenic 45.0%
GAACCGGATAGGAAGTTAGA+AGG - chr2_1:62436646-62436665 Msa0216490:intron 45.0%
GTGCATGTGGTGTAAATAGG+TGG - chr2_1:62436697-62436716 Msa0216490:intron 45.0%
GCATGTGGTGTAAATAGGTG+GGG - chr2_1:62436699-62436718 Msa0216490:intron 45.0%
AGCTAGGTTGTAGAAGAAGG+TGG + chr2_1:62434818-62434837 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2_1:62434914-62434933 Msa0216490:three_prime_UTR 45.0%
GGGTAAAATCGAAAACCAGG+AGG + chr2_1:62434932-62434951 None:intergenic 45.0%
GTGGGGTAAAATCGAAAACC+AGG + chr2_1:62434935-62434954 None:intergenic 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2_1:62434952-62434971 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG - chr2_1:62435234-62435253 Msa0216490:CDS 45.0%
CTATTTGGCCTAGTCCCATT+TGG + chr2_1:62435245-62435264 None:intergenic 45.0%
ACTAGGCCAAATAGAGTAGC+TGG - chr2_1:62435251-62435270 Msa0216490:CDS 45.0%
CCAGATCCAGCTACTCTATT+TGG + chr2_1:62435260-62435279 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG - chr2_1:62435257-62435276 Msa0216490:CDS 45.0%
! CGTTGTTTCGTGAAGAGTCA+AGG + chr2_1:62435421-62435440 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2_1:62436078-62436097 None:intergenic 45.0%
TTCAAGAACATCGTCGAGGT+GGG + chr2_1:62436151-62436170 None:intergenic 45.0%
ATTCAAGAACATCGTCGAGG+TGG + chr2_1:62436152-62436171 None:intergenic 45.0%
GTGATTCAAGAACATCGTCG+AGG + chr2_1:62436155-62436174 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2_1:62436209-62436228 Msa0216490:intron 45.0%
GACATAATGTGGGGACAGAA+GGG + chr2_1:62436404-62436423 None:intergenic 45.0%
TGACATAATGTGGGGACAGA+AGG + chr2_1:62436405-62436424 None:intergenic 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2_1:62436477-62436496 None:intergenic 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2_1:62436477-62436496 Msa0216490:CDS 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2_1:62436478-62436497 Msa0216490:CDS 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2_1:62436479-62436498 Msa0216490:CDS 45.0%
ACCGGGTATCTAAACCCAAA+CGG + chr2_1:62436597-62436616 None:intergenic 45.0%
GTTTAGATACCCGGTTCAAC+CGG - chr2_1:62436602-62436621 Msa0216490:intron 45.0%
CTTCCTATCCGGTTCATTGT+TGG + chr2_1:62436641-62436660 None:intergenic 45.0%
GAACCGGATAGGAAGTTAGA+AGG - chr2_1:62436646-62436665 Msa0216490:intron 45.0%
GTGCATGTGGTGTAAATAGG+TGG - chr2_1:62436697-62436716 Msa0216490:intron 45.0%
GCATGTGGTGTAAATAGGTG+GGG - chr2_1:62436699-62436718 Msa0216490:intron 45.0%
!!! AACAAATTTTTTTAAAAAAT+TGG - chr2_1:62435634-62435653 Msa0216490:CDS 5.0%
!!! ACAAATTTTTTTAAAAAATT+GGG - chr2_1:62435635-62435654 Msa0216490:CDS 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2_1:62435743-62435762 None:intergenic 5.0%
!!! AACAAATTTTTTTAAAAAAT+TGG - chr2_1:62435634-62435653 Msa0216490:CDS 5.0%
!!! ACAAATTTTTTTAAAAAATT+GGG - chr2_1:62435635-62435654 Msa0216490:CDS 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2_1:62435743-62435762 None:intergenic 5.0%
GAGTAGCTGGATCTGGGTAT+TGG - chr2_1:62435264-62435283 Msa0216490:CDS 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG - chr2_1:62435275-62435294 Msa0216490:CDS 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2_1:62435422-62435441 Msa0216490:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG + chr2_1:62436084-62436103 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2_1:62436210-62436229 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG + chr2_1:62436395-62436414 None:intergenic 50.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2_1:62436579-62436598 Msa0216490:CDS 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2_1:62436580-62436599 Msa0216490:CDS 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2_1:62436588-62436607 None:intergenic 50.0%
CCGGGTATCTAAACCCAAAC+GGG + chr2_1:62436596-62436615 None:intergenic 50.0%
! CCCGTTTGGGTTTAGATACC+CGG - chr2_1:62436593-62436612 Msa0216490:CDS 50.0%
CAAATCCAACCGGTTGAACC+GGG + chr2_1:62436614-62436633 None:intergenic 50.0%
CCAAATCCAACCGGTTGAAC+CGG + chr2_1:62436615-62436634 None:intergenic 50.0%
GAGTAGCTGGATCTGGGTAT+TGG - chr2_1:62435264-62435283 Msa0216490:CDS 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG - chr2_1:62435275-62435294 Msa0216490:CDS 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2_1:62435422-62435441 Msa0216490:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG + chr2_1:62436084-62436103 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2_1:62436210-62436229 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG + chr2_1:62436395-62436414 None:intergenic 50.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2_1:62436579-62436598 Msa0216490:CDS 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2_1:62436580-62436599 Msa0216490:CDS 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2_1:62436588-62436607 None:intergenic 50.0%
CCGGGTATCTAAACCCAAAC+GGG + chr2_1:62436596-62436615 None:intergenic 50.0%
! CCCGTTTGGGTTTAGATACC+CGG - chr2_1:62436593-62436612 Msa0216490:CDS 50.0%
CAAATCCAACCGGTTGAACC+GGG + chr2_1:62436614-62436633 None:intergenic 50.0%
CCAAATCCAACCGGTTGAAC+CGG + chr2_1:62436615-62436634 None:intergenic 50.0%
ACGAAACAACGGTGGCACCA+AGG - chr2_1:62435430-62435449 Msa0216490:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG + chr2_1:62436194-62436213 None:intergenic 55.0%
ATCCGTGCATCCGACTGAAG+AGG - chr2_1:62436464-62436483 Msa0216490:CDS 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2_1:62436469-62436488 None:intergenic 55.0%
AGATACCCGGTTCAACCGGT+TGG - chr2_1:62436606-62436625 Msa0216490:intron 55.0%
CCGGTTCAACCGGTTGGATT+TGG - chr2_1:62436612-62436631 Msa0216490:intron 55.0%
ACGAAACAACGGTGGCACCA+AGG - chr2_1:62435430-62435449 Msa0216490:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG + chr2_1:62436194-62436213 None:intergenic 55.0%
ATCCGTGCATCCGACTGAAG+AGG - chr2_1:62436464-62436483 Msa0216490:CDS 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2_1:62436469-62436488 None:intergenic 55.0%
AGATACCCGGTTCAACCGGT+TGG - chr2_1:62436606-62436625 Msa0216490:intron 55.0%
CCGGTTCAACCGGTTGGATT+TGG - chr2_1:62436612-62436631 Msa0216490:intron 55.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2_1:62436467-62436486 Msa0216490:CDS 60.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2_1:62436467-62436486 Msa0216490:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 62434693 62437104 62434693 ID=Msa0216490;Name=Msa0216490
chr2_1 mRNA 62434693 62437104 62434693 ID=Msa0216490-mRNA-1;Parent=Msa0216490;Name=Msa0216490-mRNA-1;_AED=0.05;_eAED=0.05;_QI=188|1|1|1|1|1|3|457|360
chr2_1 exon 62434693 62435776 62434693 ID=Msa0216490-mRNA-1:exon:17285;Parent=Msa0216490-mRNA-1
chr2_1 exon 62436346 62436614 62436346 ID=Msa0216490-mRNA-1:exon:17284;Parent=Msa0216490-mRNA-1
chr2_1 exon 62436730 62437104 62436730 ID=Msa0216490-mRNA-1:exon:17283;Parent=Msa0216490-mRNA-1
chr2_1 five_prime_UTR 62436917 62437104 62436917 ID=Msa0216490-mRNA-1:five_prime_utr;Parent=Msa0216490-mRNA-1
chr2_1 CDS 62436730 62436916 62436730 ID=Msa0216490-mRNA-1:cds;Parent=Msa0216490-mRNA-1
chr2_1 CDS 62436346 62436614 62436346 ID=Msa0216490-mRNA-1:cds;Parent=Msa0216490-mRNA-1
chr2_1 CDS 62435150 62435776 62435150 ID=Msa0216490-mRNA-1:cds;Parent=Msa0216490-mRNA-1
chr2_1 three_prime_UTR 62434693 62435149 62434693 ID=Msa0216490-mRNA-1:three_prime_utr;Parent=Msa0216490-mRNA-1
Gene Sequence

>Msa0216490

ATGATAATGGGAATTCAAGACAAAGATCCTCTTGCACAATTGAGTTTACCTCCTGGTTTTCGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTCGACCCATGGGTTCTTCCAAGTAAGGCAATTTTTGGTGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACTAGGCCAAATAGAGTAGCTGGATCTGGGTATTGGAAAGCCACTGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATCAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGACTCCTTGACTCTTCACGAAACAACGGTGGCACCAAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAACTCAAGCGCACAAAAACCTATTCCAAATGGCGTCGTTTCAAGCAGAGAATACACTCAATACAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGATGTTCTTGAATCACTTCCACAAATTGACGACCATTGCTTCAAGCTGCCACGTGTCAACTCGCTAAGAACGGCGCAACATCACCAACAAGAAGAGAAGATGAATCTTCAAAATTTAAATGCTGCAAATAACAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGACGGTCAAACTCAAGGAATGATGAATTTTAGTGGGTGCAATGACCTTTATGTCCCTTCTGTCCCCACATTATGTCAATTGGACACTTCCGTTATTACGGAGAAAACTAGCAACATATCCGTGCATCCGACTGAAGAGGAGGTTCAAAGTGGGGCGAGAGCAAATCAAGTTGAGAATTCGTCTGGATTTTTTCAACGCGGTTCAAATGATTTTACTCAAGGAATGGGATACACTAATCCGGTTGACCCGTTTGGGTTTAGATACCCGGTTCAACCGGTTGGATTTGGATTCCAACAATGA
Protein sequence

>Msa0216490

MIMGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVVSSREYTQYSNGSSSSSSSHLDDVLESLPQIDDHCFKLPRVNSLRTAQHHQQEEKMNLQNLNAANNNFMDWSNSSSILNTVTGFQDGQTQGMMNFSGCNDLYVPSVPTLCQLDTSVITEKTSNISVHPTEEEVQSGARANQVENSSGFFQRGSNDFTQGMGYTNPVDPFGFRYPVQPVGFGFQQ*