AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0256390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256390 MtrunA17_Chr2g0318081 93.056 360 19 2 1 360 1 354 0.0 687
Msa0256390 MtrunA17_Chr8g0359921 65.330 349 96 8 3 349 1 326 1.68e-149 424
Msa0256390 MtrunA17_Chr3g0124761 66.279 172 54 2 12 180 3 173 4.39e-78 241
Msa0256390 MtrunA17_Chr2g0318101 64.162 173 49 2 13 172 12 184 2.10e-76 239
Msa0256390 MtrunA17_Chr8g0384721 67.702 161 47 2 14 170 5 164 2.06e-75 234
Msa0256390 MtrunA17_Chr4g0047841 63.388 183 42 3 16 173 15 197 1.04e-74 234
Msa0256390 MtrunA17_Chr3g0130731 66.049 162 51 2 12 170 3 163 1.21e-73 230
Msa0256390 MtrunA17_Chr7g0252971 63.314 169 49 3 13 168 5 173 4.98e-73 230
Msa0256390 MtrunA17_Chr7g0263931 62.130 169 58 3 7 169 2 170 8.08e-71 224
Msa0256390 MtrunA17_Chr4g0042561 63.057 157 54 1 12 164 5 161 2.80e-70 221
Msa0256390 MtrunA17_Chr5g0417791 63.871 155 52 1 14 164 1 155 3.38e-70 220
Msa0256390 MtrunA17_Chr2g0326361 59.756 164 60 2 12 169 10 173 2.75e-68 217
Msa0256390 MtrunA17_Chr2g0309891 55.063 158 68 2 11 165 1 158 2.41e-60 197
Msa0256390 MtrunA17_Chr5g0433781 51.351 185 79 2 11 193 1 176 4.87e-60 204
Msa0256390 MtrunA17_Chr6g0484441 55.769 156 67 1 16 171 5 158 3.94e-59 194
Msa0256390 MtrunA17_Chr3g0091921 55.090 167 73 1 13 177 13 179 2.56e-58 191
Msa0256390 MtrunA17_Chr6g0453451 52.000 175 82 1 6 178 10 184 3.45e-58 191
Msa0256390 MtrunA17_Chr3g0109821 50.262 191 90 3 11 198 1 189 7.15e-58 199
Msa0256390 MtrunA17_Chr4g0060931 53.293 167 76 1 13 177 14 180 1.34e-57 191
Msa0256390 MtrunA17_Chr7g0253011 48.792 207 86 4 14 212 15 209 5.88e-57 190
Msa0256390 MtrunA17_Chr6g0481091 51.592 157 74 1 11 165 1 157 1.42e-56 184
Msa0256390 MtrunA17_Chr5g0417001 52.083 192 80 6 7 187 6 196 1.73e-56 189
Msa0256390 MtrunA17_Chr3g0139331 54.430 158 68 2 15 170 10 165 8.41e-56 186
Msa0256390 MtrunA17_Chr4g0076731 56.051 157 62 3 18 171 56 208 2.39e-55 187
Msa0256390 MtrunA17_Chr4g0017921 55.263 152 62 2 16 164 8 156 2.06e-54 182
Msa0256390 MtrunA17_Chr1g0147421 53.459 159 69 3 15 170 26 182 2.08e-54 182
Msa0256390 MtrunA17_Chr6g0453131 52.469 162 67 2 16 167 15 176 5.31e-54 182
Msa0256390 MtrunA17_Chr5g0405211 44.670 197 101 3 16 206 8 202 5.55e-54 181
Msa0256390 MtrunA17_Chr8g0361731 48.168 191 87 5 18 196 16 206 8.92e-54 182
Msa0256390 MtrunA17_Chr2g0309331 50.595 168 74 4 12 172 6 171 4.44e-53 179
Msa0256390 MtrunA17_Chr2g0316971 55.000 160 60 3 16 167 23 178 6.02e-53 179
Msa0256390 MtrunA17_Chr1g0200561 47.399 173 86 2 16 185 19 189 1.50e-52 177
Msa0256390 MtrunA17_Chr5g0400461 51.786 168 67 4 11 168 1 164 2.12e-52 176
Msa0256390 MtrunA17_Chr8g0372121 48.765 162 78 2 11 169 1 160 3.17e-52 175
Msa0256390 MtrunA17_Chr5g0442771 47.150 193 89 3 18 198 20 211 1.35e-51 174
Msa0256390 MtrunA17_Chr6g0461661 46.759 216 87 6 14 213 16 219 1.58e-51 176
Msa0256390 MtrunA17_Chr4g0018391 50.658 152 70 2 16 164 7 156 1.73e-51 174
Msa0256390 MtrunA17_Chr8g0346001 47.879 165 74 2 12 164 11 175 2.64e-51 176
Msa0256390 MtrunA17_Chr4g0054791 44.949 198 103 3 15 207 5 201 5.70e-51 172
Msa0256390 MtrunA17_Chr7g0214071 54.658 161 66 3 12 170 11 166 7.41e-51 170
Msa0256390 MtrunA17_Chr2g0312321 44.898 196 91 5 11 201 6 189 2.23e-50 170
Msa0256390 MtrunA17_Chr4g0056541 51.316 152 69 2 16 164 7 156 2.63e-50 172
Msa0256390 MtrunA17_Chr7g0217721 38.224 259 136 4 13 255 16 266 3.03e-50 171
Msa0256390 MtrunA17_Chr2g0311661 46.798 203 83 6 18 202 23 218 5.12e-50 169
Msa0256390 MtrunA17_Chr2g0311651 49.133 173 72 4 18 174 24 196 1.17e-48 166
Msa0256390 MtrunA17_Chr5g0398971 50.000 154 70 4 16 164 7 158 1.44e-48 167
Msa0256390 MtrunA17_Chr7g0217711 54.264 129 59 0 13 141 16 144 5.71e-47 157
Msa0256390 MtrunA17_Chr1g0183741 42.326 215 89 6 3 196 1 201 5.75e-47 160
Msa0256390 MtrunA17_Chr5g0428991 50.000 164 77 2 6 164 12 175 1.79e-46 167
Msa0256390 MtrunA17_Chr3g0130101 46.309 149 78 1 18 164 9 157 5.57e-46 160
Msa0256390 MtrunA17_Chr7g0261411 48.148 162 74 3 3 162 1 154 1.22e-45 157
Msa0256390 MtrunA17_Chr8g0364791 42.614 176 96 2 11 184 1 173 2.31e-45 161
Msa0256390 MtrunA17_Chr3g0128151 48.750 160 80 1 11 168 17 176 2.47e-45 163
Msa0256390 MtrunA17_Chr3g0128111 48.052 154 74 3 19 168 45 196 8.33e-45 154
Msa0256390 MtrunA17_Chr1g0201021 45.283 159 85 1 14 170 17 175 1.22e-44 161
Msa0256390 MtrunA17_Chr1g0197351 48.521 169 76 3 15 175 41 206 2.25e-44 159
Msa0256390 MtrunA17_Chr3g0092671 38.889 234 121 6 18 248 7 221 2.75e-44 160
Msa0256390 MtrunA17_Chr4g0038751 49.375 160 72 4 13 169 13 166 2.90e-44 154
Msa0256390 MtrunA17_Chr3g0144271 47.619 168 80 4 1 162 8 173 7.44e-44 156
Msa0256390 MtrunA17_Chr1g0197361 48.718 156 76 3 18 170 10 164 1.18e-43 159
Msa0256390 MtrunA17_Chr8g0384201 41.477 176 98 2 11 184 1 173 1.61e-43 157
Msa0256390 MtrunA17_Chr3g0131911 47.531 162 73 3 16 167 14 173 2.30e-41 145
Msa0256390 MtrunA17_Chr8g0385991 45.000 160 79 3 16 168 14 171 4.96e-41 144
Msa0256390 MtrunA17_Chr2g0321741 46.212 132 62 3 36 166 12 135 2.70e-36 134
Msa0256390 MtrunA17_Chr4g0050701 40.123 162 81 3 16 169 11 164 8.29e-36 129
Msa0256390 MtrunA17_Chr2g0321631 45.570 158 72 5 17 162 5 160 1.49e-35 130
Msa0256390 MtrunA17_Chr8g0345671 46.104 154 66 6 16 161 11 155 7.36e-35 132
Msa0256390 MtrunA17_Chr7g0266701 36.598 194 103 8 16 191 4 195 1.01e-34 128
Msa0256390 MtrunA17_Chr4g0026141 43.038 158 77 6 16 162 5 160 1.64e-33 125
Msa0256390 MtrunA17_Chr3g0113001 44.444 144 74 2 65 205 14 154 1.98e-33 125
Msa0256390 MtrunA17_Chr8g0345691 40.909 154 74 6 16 161 12 156 1.59e-29 117
Msa0256390 MtrunA17_Chr8g0345711 42.537 134 71 4 11 139 7 139 2.04e-28 108
Msa0256390 MtrunA17_Chr8g0345731 41.985 131 69 4 16 139 24 154 1.33e-26 103
Msa0256390 MtrunA17_Chr8g0384351 35.294 204 107 7 12 215 6 184 1.63e-25 101
Msa0256390 MtrunA17_Chr3g0113031 42.748 131 68 4 79 205 3 130 9.33e-25 101
Msa0256390 MtrunA17_Chr8g0345721 35.955 178 72 6 3 139 15 191 2.52e-24 99.0
Msa0256390 MtrunA17_Chr7g0243371 57.317 82 32 2 69 148 17 97 7.81e-23 92.4
Msa0256390 MtrunA17_Chr8g0345701 40.972 144 63 6 15 139 6 146 1.52e-22 93.2
Msa0256390 MtrunA17_Chr8g0345741 36.170 141 75 5 27 162 2 132 2.98e-22 91.7
Msa0256390 MtrunA17_Chr3g0130321 30.952 210 117 6 14 209 5 200 2.15e-21 90.9
Msa0256390 MtrunA17_Chr7g0251661 30.201 149 95 5 12 154 6 151 1.63e-18 81.6
Msa0256390 MtrunA17_Chr7g0251651 32.558 129 81 4 14 139 16 141 4.63e-14 70.1
Msa0256390 MtrunA17_Chr8g0389661 32.895 152 76 5 14 141 45 194 3.97e-12 67.4
Msa0256390 MtrunA17_Chr7g0274971 35.714 154 83 9 22 165 11 158 5.61e-12 64.7
Msa0256390 MtrunA17_Chr3g0113011 50.000 52 26 0 13 64 16 67 2.27e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256390 AT4G27410.2 78.636 220 46 1 3 222 1 219 7.65e-124 358
Msa0256390 AT1G52890.1 57.061 347 116 9 3 347 1 316 4.24e-121 352
Msa0256390 AT4G27410.3 72.996 237 46 2 3 222 1 236 2.49e-119 348
Msa0256390 AT3G15500.1 68.924 251 71 4 3 249 1 248 1.26e-117 343
Msa0256390 AT3G04070.2 62.694 193 57 5 8 187 4 194 1.78e-76 239
Msa0256390 AT1G01720.1 65.341 176 55 3 14 184 5 179 4.07e-76 236
Msa0256390 AT5G63790.1 59.162 191 69 3 12 197 46 232 2.66e-74 233
Msa0256390 AT5G63790.2 59.162 191 69 3 12 197 56 242 3.75e-74 233
Msa0256390 AT5G08790.1 64.072 167 54 2 12 173 3 168 6.14e-74 231
Msa0256390 AT1G61110.1 66.477 176 43 4 16 177 16 189 5.32e-73 230
Msa0256390 AT1G77450.1 65.432 162 52 2 12 170 6 166 7.62e-73 227
Msa0256390 AT3G04070.1 57.895 209 57 6 8 187 4 210 1.88e-72 229
Msa0256390 AT1G69490.1 62.963 162 56 1 12 169 5 166 5.74e-71 223
Msa0256390 AT3G15510.1 64.417 163 45 3 20 169 21 183 9.43e-70 223
Msa0256390 AT3G18400.1 43.388 242 128 3 16 250 5 244 1.12e-62 203
Msa0256390 AT1G52880.1 63.125 160 47 2 20 167 21 180 3.18e-61 199
Msa0256390 AT1G65910.1 48.990 198 96 3 11 204 1 197 6.62e-59 201
Msa0256390 AT5G07680.1 52.105 190 86 3 3 190 4 190 8.28e-59 193
Msa0256390 AT3G17730.1 46.114 193 92 3 11 200 1 184 2.75e-58 189
Msa0256390 AT5G61430.1 45.726 234 108 5 13 227 13 246 3.94e-58 192
Msa0256390 AT2G02450.1 52.874 174 79 2 18 190 53 224 1.14e-57 192
Msa0256390 AT2G02450.2 52.874 174 79 2 18 190 53 224 1.75e-57 192
Msa0256390 AT5G07680.2 53.631 179 78 3 14 190 1 176 2.26e-57 189
Msa0256390 AT2G24430.2 52.299 174 80 2 1 172 1 173 2.58e-57 189
Msa0256390 AT2G24430.1 52.299 174 80 2 1 172 1 173 2.58e-57 189
Msa0256390 AT3G03200.1 48.691 191 91 3 11 198 1 187 7.44e-57 192
Msa0256390 AT5G18270.2 49.505 202 95 4 14 212 19 216 1.81e-56 187
Msa0256390 AT5G17260.1 53.049 164 74 2 11 171 1 164 3.18e-56 191
Msa0256390 AT5G39610.1 49.749 199 84 4 13 197 17 213 1.09e-55 184
Msa0256390 AT1G26870.1 50.811 185 79 4 7 179 7 191 1.37e-55 187
Msa0256390 AT5G18270.1 48.515 202 97 4 14 212 19 216 1.58e-55 185
Msa0256390 AT5G39820.1 49.730 185 68 4 18 177 22 206 1.33e-54 182
Msa0256390 AT2G43000.1 54.194 155 70 1 18 171 20 174 1.38e-54 181
Msa0256390 AT3G04060.1 49.505 202 90 5 14 212 18 210 3.13e-54 182
Msa0256390 AT2G33480.1 57.143 154 63 1 14 167 13 163 7.85e-54 179
Msa0256390 AT4G10350.1 51.974 152 70 1 16 164 9 160 1.13e-53 180
Msa0256390 AT5G53950.1 56.051 157 65 2 16 168 17 173 5.07e-53 179
Msa0256390 AT2G18060.3 48.171 164 80 2 9 169 2 163 5.28e-53 179
Msa0256390 AT2G18060.1 48.171 164 80 2 9 169 2 163 5.28e-53 179
Msa0256390 AT2G33480.2 57.143 154 61 2 14 167 13 161 7.47e-53 176
Msa0256390 AT1G71930.2 42.640 197 103 3 9 197 2 196 9.10e-53 177
Msa0256390 AT1G71930.1 42.640 197 103 3 9 197 2 196 9.10e-53 177
Msa0256390 AT1G33280.1 52.632 152 66 2 16 164 8 156 1.77e-52 176
Msa0256390 AT1G79580.3 54.140 157 65 3 12 164 13 166 2.18e-52 178
Msa0256390 AT1G79580.5 54.140 157 65 3 12 164 13 166 2.18e-52 178
Msa0256390 AT1G79580.4 54.140 157 65 3 12 164 13 166 2.18e-52 178
Msa0256390 AT1G79580.2 54.140 157 65 3 12 164 13 166 2.18e-52 178
Msa0256390 AT1G79580.1 54.140 157 65 3 12 164 13 166 2.18e-52 178
Msa0256390 AT5G46590.1 55.195 154 65 3 16 165 6 159 3.76e-52 175
Msa0256390 AT1G54330.1 52.866 157 69 2 11 165 1 154 3.97e-52 175
Msa0256390 AT3G29035.1 53.750 160 72 1 13 170 21 180 6.74e-52 175
Msa0256390 AT5G13180.1 56.604 159 63 4 14 170 12 166 7.97e-52 173
Msa0256390 AT3G15170.1 53.896 154 67 2 16 165 20 173 3.26e-51 173
Msa0256390 AT4G17980.1 53.750 160 60 4 16 165 6 161 4.59e-51 171
Msa0256390 AT4G17980.2 52.121 165 65 4 11 165 1 161 7.93e-51 171
Msa0256390 AT1G32510.1 43.182 220 100 5 16 210 6 225 9.80e-51 171
Msa0256390 AT4G36160.1 51.634 153 69 2 15 164 9 159 1.28e-50 173
Msa0256390 AT4G36160.3 51.634 153 69 2 15 164 9 159 1.28e-50 173
Msa0256390 AT4G36160.2 51.634 153 69 2 15 164 13 163 1.36e-50 173
Msa0256390 AT1G56010.2 46.875 160 81 2 11 166 14 173 1.93e-50 171
Msa0256390 AT5G66300.1 50.000 156 74 2 15 167 11 165 2.05e-50 171
Msa0256390 AT3G12977.1 46.541 159 84 1 11 168 13 171 2.15e-50 170
Msa0256390 AT1G12260.2 50.641 156 72 2 16 168 7 160 2.47e-50 172
Msa0256390 AT1G12260.1 50.641 156 72 2 16 168 7 160 3.09e-50 173
Msa0256390 AT3G10480.2 50.633 158 76 1 11 166 22 179 3.62e-50 174
Msa0256390 AT1G76420.1 48.837 172 77 3 3 164 1 171 5.42e-50 171
Msa0256390 AT5G62380.2 51.974 152 68 2 16 164 7 156 7.30e-50 171
Msa0256390 AT5G62380.1 51.974 152 68 2 16 164 7 156 7.30e-50 171
Msa0256390 AT1G33060.2 48.466 163 82 1 11 171 19 181 1.73e-49 176
Msa0256390 AT1G33060.1 48.466 163 82 1 11 171 19 181 1.79e-49 176
Msa0256390 AT1G32770.1 45.604 182 85 3 12 179 12 193 2.00e-49 170
Msa0256390 AT5G46590.2 56.028 141 59 2 16 153 6 146 2.55e-49 167
Msa0256390 AT1G62700.1 50.641 156 72 2 16 168 7 160 2.88e-49 170
Msa0256390 AT1G62700.2 50.641 156 72 2 16 168 7 160 2.88e-49 170
Msa0256390 AT2G46770.1 41.038 212 106 3 12 204 12 223 8.21e-49 168
Msa0256390 AT3G10480.1 50.314 159 76 2 11 166 22 180 9.38e-49 170
Msa0256390 AT3G10500.1 50.000 158 77 1 15 170 8 165 1.46e-48 172
Msa0256390 AT4G35580.3 45.408 196 99 3 15 208 8 197 1.98e-48 171
Msa0256390 AT4G35580.2 45.408 196 99 3 15 208 8 197 2.06e-48 171
Msa0256390 AT4G35580.1 45.408 196 99 3 15 208 8 197 2.27e-48 171
Msa0256390 AT5G04410.1 50.000 158 77 1 15 170 8 165 5.47e-48 171
Msa0256390 AT5G24590.2 42.929 198 105 3 6 200 3 195 5.69e-48 168
Msa0256390 AT3G10490.1 50.323 155 74 2 15 166 26 180 7.40e-48 162
Msa0256390 AT3G10490.2 50.000 158 70 3 15 166 26 180 4.12e-47 166
Msa0256390 AT3G61910.1 43.478 184 88 3 12 179 7 190 1.65e-46 161
Msa0256390 AT2G17040.1 40.909 220 116 5 18 231 8 219 5.01e-46 159
Msa0256390 AT3G12910.1 38.783 263 123 9 6 239 15 268 4.15e-45 157
Msa0256390 AT3G49530.2 47.134 157 80 2 11 164 8 164 5.83e-45 159
Msa0256390 AT1G34180.3 45.161 155 83 1 18 170 18 172 8.97e-45 160
Msa0256390 AT3G49530.1 47.134 157 80 2 11 164 8 164 1.56e-44 159
Msa0256390 AT2G27300.1 38.009 221 110 5 11 212 9 221 3.44e-44 155
Msa0256390 AT1G34180.1 45.161 155 83 1 18 170 18 172 5.23e-44 160
Msa0256390 AT5G64060.1 44.586 157 85 1 11 165 1 157 5.71e-44 155
Msa0256390 AT3G10480.3 43.085 188 71 3 15 166 26 213 6.65e-44 159
Msa0256390 AT1G34190.1 43.871 155 85 1 18 170 18 172 6.74e-44 159
Msa0256390 AT5G22290.1 41.304 184 92 5 18 194 23 197 9.06e-44 154
Msa0256390 AT1G34180.4 42.515 167 82 1 18 170 18 184 2.41e-42 153
Msa0256390 AT3G44290.2 43.396 159 78 3 18 171 16 167 4.03e-42 147
Msa0256390 AT4G28530.1 45.556 180 72 6 3 164 1 172 4.73e-42 150
Msa0256390 AT1G34180.2 42.515 167 82 1 18 170 18 184 1.02e-41 154
Msa0256390 AT3G44290.1 43.396 159 78 3 18 171 16 167 2.43e-41 148
Msa0256390 AT5G09330.5 42.675 157 88 1 11 165 1 157 6.69e-41 150
Msa0256390 AT5G09330.2 42.675 157 88 1 11 165 1 157 6.69e-41 150
Msa0256390 AT5G09330.4 42.675 157 88 1 11 165 1 157 6.69e-41 150
Msa0256390 AT5G09330.3 42.675 157 88 1 11 165 1 157 6.69e-41 150
Msa0256390 AT5G09330.1 42.675 157 88 1 11 165 1 157 6.69e-41 150
Msa0256390 AT1G32870.1 50.314 159 73 3 16 170 10 166 6.75e-41 150
Msa0256390 AT1G32870.2 50.314 159 73 3 16 170 10 166 8.12e-41 150
Msa0256390 AT1G32870.3 50.314 159 73 3 16 170 46 202 1.54e-40 150
Msa0256390 AT5G61430.2 42.857 182 85 5 65 227 2 183 1.67e-35 130
Msa0256390 AT4G10350.2 55.208 96 43 0 69 164 18 113 1.16e-33 126
Msa0256390 AT1G56010.1 51.429 105 48 1 65 166 2 106 2.19e-33 125
Msa0256390 AT5G64530.1 39.306 173 77 4 14 170 1 161 3.54e-33 122
Msa0256390 AT2G33480.3 57.576 99 42 0 69 167 8 106 6.83e-33 122
Msa0256390 AT3G44350.2 40.491 163 86 5 16 169 5 165 1.08e-32 122
Msa0256390 AT3G12977.2 52.427 103 48 1 65 166 14 116 1.83e-32 121
Msa0256390 AT5G22380.1 37.245 196 111 8 19 203 8 202 5.94e-31 117
Msa0256390 AT5G04395.1 42.857 147 66 3 12 141 24 169 1.50e-30 115
Msa0256390 AT5G64530.2 44.697 132 59 3 14 143 1 120 3.95e-30 113
Msa0256390 AT3G44350.1 42.029 138 70 4 16 145 5 140 1.73e-29 111
Msa0256390 AT4G01550.1 37.714 175 90 7 19 184 7 171 1.25e-26 110
Msa0256390 AT3G04420.2 41.732 127 70 2 17 139 4 130 2.84e-26 106
Msa0256390 AT2G43000.2 50.526 95 46 1 78 171 2 96 3.91e-26 103
Msa0256390 AT4G28530.2 35.758 165 51 3 16 164 10 135 5.42e-26 106
Msa0256390 AT3G04420.1 41.732 127 70 2 17 139 4 130 6.21e-26 106
Msa0256390 AT4G01520.1 35.632 174 97 6 17 180 5 173 8.27e-25 102
Msa0256390 AT4G27410.1 62.069 87 32 1 136 222 1 86 2.24e-24 98.2
Msa0256390 AT4G01540.3 36.047 172 95 6 19 180 7 173 2.39e-24 103
Msa0256390 AT4G01540.4 36.047 172 95 6 19 180 7 173 2.59e-24 103
Msa0256390 AT4G01540.2 36.257 171 94 6 19 179 7 172 4.00e-24 102
Msa0256390 AT4G01540.1 36.257 171 94 6 19 179 7 172 4.01e-24 103
Msa0256390 AT1G02230.1 41.538 130 66 5 17 139 4 130 3.29e-23 99.4
Msa0256390 AT1G02250.1 35.503 169 95 5 14 175 1 162 3.38e-22 96.7
Msa0256390 AT1G02220.1 37.692 130 74 3 14 139 1 127 4.65e-21 94.0
Msa0256390 AT3G56530.1 36.601 153 92 4 13 162 49 199 1.37e-20 91.7
Msa0256390 AT3G10490.4 49.367 79 39 1 89 166 2 80 2.60e-20 91.3
Msa0256390 AT3G10490.3 49.367 79 39 1 89 166 2 80 2.60e-20 91.3
Msa0256390 AT2G18060.2 47.368 76 38 1 94 169 2 75 9.40e-19 85.5
Msa0256390 AT5G50820.1 37.226 137 70 5 14 144 15 141 4.55e-18 81.6
Msa0256390 AT3G55210.1 34.161 161 88 5 16 162 11 167 6.86e-18 83.2
Msa0256390 AT1G01010.1 34.146 164 85 8 19 168 6 160 2.65e-17 83.2
Msa0256390 AT5G22290.2 39.623 106 49 4 95 194 2 98 3.15e-17 80.5
Msa0256390 AT5G14000.1 31.646 158 97 4 14 167 13 163 2.42e-16 77.4
Msa0256390 AT5G14000.2 34.615 130 81 2 14 141 13 140 8.95e-16 74.3
Msa0256390 AT3G04430.1 35.606 132 71 5 22 140 6 136 4.31e-12 65.1
Msa0256390 AT4G28500.1 34.641 153 80 6 16 150 59 209 3.19e-11 63.9
Msa0256390 AT4G29230.1 31.210 157 81 5 10 141 42 196 4.72e-11 64.3

Find 122 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAGGCACCAAAACTAAT+TGG 0.246600 2_2:-51123326 Msa0256390:CDS
TGATCTTTGATTGATGATAA+TGG 0.260851 2_2:-51123868 Msa0256390:exon
CCAGATCCAGCCACTCTATT+TGG 0.265091 2_2:+51123444 None:intergenic
CCGGTTCAACCGGTTGGATT+TGG 0.265550 2_2:-51122093 Msa0256390:CDS
CTGCTTGAAACGACGCCATT+TGG 0.294519 2_2:+51122624 None:intergenic
ATGCATAATCCAATTAGTTT+TGG 0.307345 2_2:+51123317 None:intergenic
CTCAATTTCGGCTAGAGATA+TGG 0.309590 2_2:-51121931 Msa0256390:three_prime_UTR
GATTCATCTTCTCTTCTTGT+TGG 0.315390 2_2:+51122463 None:intergenic
TAAATAGGCGGGGATTCTTT+TGG 0.317812 2_2:-51121995 Msa0256390:three_prime_UTR
CTAATCCGGTTGACCCGTTT+GGG 0.322735 2_2:-51122125 Msa0256390:CDS
TGCTGCAAATAATAATTTCA+TGG 0.328047 2_2:-51122427 Msa0256390:CDS
CATTGATGTGGTTAGCTAAA+AGG 0.330943 2_2:+51121674 None:intergenic
TTGCATTTGTTTGCAATGTT+AGG 0.337412 2_2:-51121723 Msa0256390:three_prime_UTR
CTATTTGGCCTAGTCCCATT+TGG 0.338304 2_2:+51123459 None:intergenic
TTTGGATACTTCCTATCTCT+TGG 0.340923 2_2:+51123477 None:intergenic
CCAAATAGAGTGGCTGGATC+TGG 0.342713 2_2:-51123444 Msa0256390:CDS
CCAAATCCAACCGGTTGAAC+CGG 0.359372 2_2:+51122093 None:intergenic
TGAAGGAACAATAGAATCAT+TGG 0.360300 2_2:-51121853 Msa0256390:three_prime_UTR
GATCTTTGATTGATGATAAT+GGG 0.370251 2_2:-51123867 Msa0256390:exon
ATTGGACACTTCCGTTATTA+CGG 0.370558 2_2:-51122280 Msa0256390:CDS
ACTAATCCGGTTGACCCGTT+TGG 0.373818 2_2:-51122126 Msa0256390:CDS
GAAACGACGCCATTTGGAAT+AGG 0.376235 2_2:+51122630 None:intergenic
AAAGTGCATGTGGTGTAAAT+AGG 0.381598 2_2:-51122010 Msa0256390:three_prime_UTR
AACCAAGTTGAGAATTCGTC+TGG 0.381998 2_2:-51122195 Msa0256390:CDS
TTGTTTGCAATGTTAGGCTT+TGG 0.386740 2_2:-51121717 Msa0256390:three_prime_UTR
CTTCCTATCCGGTTCATTGT+TGG 0.391276 2_2:+51122067 None:intergenic
TGTCCCCACATTATGTCAAT+TGG 0.393100 2_2:-51122298 Msa0256390:CDS
TTGAATTGCAGCTAGATGAT+TGG 0.399386 2_2:-51122695 Msa0256390:intron
TGAATTGCAGCTAGATGATT+GGG 0.406156 2_2:-51122694 Msa0256390:intron
GAAGGAACAATAGAATCATT+GGG 0.409016 2_2:-51121852 Msa0256390:three_prime_UTR
ACAAATGAAGGTAGAAAAGT+TGG 0.415542 2_2:-51123387 Msa0256390:CDS
ATTTCTTTAGTCCAAGAGAT+AGG 0.426397 2_2:-51123488 Msa0256390:CDS
CTAAACCCAAACGGGTCAAC+CGG 0.428969 2_2:+51122120 None:intergenic
CCCGTTTGGGTTTAGATACC+CGG 0.440772 2_2:-51122112 Msa0256390:CDS
CAAATAATAATTTCATGGAT+TGG 0.446522 2_2:-51122422 Msa0256390:CDS
TTTCCTTCTAACTTCCTATC+CGG 0.448826 2_2:+51122056 None:intergenic
GAGTGGCTGGATCTGGGTAT+TGG 0.452511 2_2:-51123437 Msa0256390:CDS
GAACCGGATAGGAAGTTAGA+AGG 0.460954 2_2:-51122059 Msa0256390:three_prime_UTR
TATAGCTAGGTTGTAGAAAG+AGG 0.462891 2_2:+51123937 None:intergenic
GCCTAACAAAATTAGAAAAG+TGG 0.463768 2_2:-51121973 Msa0256390:three_prime_UTR
GTTTAGATACCCGGTTCAAC+CGG 0.466337 2_2:-51122103 Msa0256390:CDS
TCCTCTTCAGTCGGATGCAC+GGG 0.469154 2_2:+51122240 None:intergenic
TTCTCAATAACCGGTAGACA+TGG 0.472854 2_2:+51124019 None:intergenic
AGAGATAGGAAGTATCCAAA+TGG 0.473419 2_2:-51123474 Msa0256390:CDS
TTTGGATTCCAACAATGAAC+CGG 0.476582 2_2:-51122075 Msa0256390:exon
TATGTTGGTAAAGCTCCTAA+AGG 0.483857 2_2:-51123342 Msa0256390:CDS
CAAATAGAGTGGCTGGATCT+GGG 0.487944 2_2:-51123443 Msa0256390:CDS
TGGGGACAGAAGGGACATAA+AGG 0.491862 2_2:+51122313 None:intergenic
AAGCAATGGTCGTCAATTTG+TGG 0.495194 2_2:+51122528 None:intergenic
AACAAGAAGCTCTTCATCAG+TGG 0.495470 2_2:+51123785 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.496775 2_2:-51123701 Msa0256390:CDS
ACTAGGCCAAATAGAGTGGC+TGG 0.497039 2_2:-51123450 Msa0256390:CDS
CCGGGTATCTAAACCCAAAC+GGG 0.497333 2_2:+51122112 None:intergenic
ACATTCTATGAATCTATCCA+TGG 0.501104 2_2:-51121893 Msa0256390:three_prime_UTR
ACCGGGTATCTAAACCCAAA+CGG 0.506194 2_2:+51122111 None:intergenic
TTCACTACTTTATCTCCCCA+TGG 0.509914 2_2:+51121876 None:intergenic
GACAAGATTATAACAAATGA+AGG 0.510810 2_2:-51123399 Msa0256390:CDS
TATAATCTTGTCTGTTCCAG+TGG 0.510918 2_2:+51123410 None:intergenic
TGACATAATGTGGGGACAGA+AGG 0.514449 2_2:+51122303 None:intergenic
TGTTGGAATCCAAATCCAAC+CGG 0.518411 2_2:+51122084 None:intergenic
TATCTATGTCGTAAAGTAGC+TGG 0.519439 2_2:-51123759 Msa0256390:CDS
TGCATGTGGTGTAAATAGGC+GGG 0.520635 2_2:-51122006 Msa0256390:three_prime_UTR
TTCAAGAACGTCGTCGAGGT+GGG 0.522480 2_2:+51122557 None:intergenic
CAAATCCAACCGGTTGAACC+GGG 0.522706 2_2:+51122094 None:intergenic
AGTGTCCAATTGACATAATG+TGG 0.525796 2_2:+51122293 None:intergenic
CTCCTCTTCAGTCGGATGCA+CGG 0.528695 2_2:+51122239 None:intergenic
GGAAGTATCCAAATGGGACT+AGG 0.531933 2_2:-51123467 Msa0256390:CDS
GAGATAGGAAGTATCCAAAT+GGG 0.536430 2_2:-51123473 Msa0256390:CDS
AATAATTGAGTTGAAGATGT+TGG 0.536754 2_2:+51123905 None:intergenic
ACCCAGACGAATTCTCAACT+TGG 0.539808 2_2:+51122193 None:intergenic
AACTCACTTGGAAGAACCCA+TGG 0.541829 2_2:+51123684 None:intergenic
ATTCAAGAACGTCGTCGAGG+TGG 0.545842 2_2:+51122556 None:intergenic
CTTTGAACCTCCTCTTCAGT+CGG 0.546459 2_2:+51122231 None:intergenic
TCTGGGTATTGGAAAGCCAC+TGG 0.550772 2_2:-51123426 Msa0256390:CDS
AGGTATGGGATACACTAATC+CGG 0.551375 2_2:-51122139 Msa0256390:CDS
CACGTGGCAGCTTGAAGCAA+TGG 0.554810 2_2:+51122514 None:intergenic
AAATATCACCCCATGTCTAC+CGG 0.554893 2_2:-51124029 Msa0256390:five_prime_UTR
CATTCTATGAATCTATCCAT+GGG 0.556174 2_2:-51121892 Msa0256390:three_prime_UTR
CATATCTCTAGCCGAAATTG+AGG 0.556183 2_2:+51121932 None:intergenic
GCACAATTGAGTTTACCTCC+TGG 0.560444 2_2:-51123822 Msa0256390:CDS
TCTCAATAACCGGTAGACAT+GGG 0.561118 2_2:+51124020 None:intergenic
CTCAATAACCGGTAGACATG+GGG 0.562083 2_2:+51124021 None:intergenic
GGAGATAAAGTAGTGAATGA+AGG 0.566636 2_2:-51121870 Msa0256390:three_prime_UTR
ACAAGAAGCTCTTCATCAGT+GGG 0.569952 2_2:+51123786 None:intergenic
AGATACCCGGTTCAACCGGT+TGG 0.574244 2_2:-51122099 Msa0256390:CDS
GACATAATGTGGGGACAGAA+GGG 0.579791 2_2:+51122304 None:intergenic
TTTCAAGACGGTCAAACTCA+AGG 0.582786 2_2:-51122363 Msa0256390:CDS
GGTAAACTCAATTGTGCAAG+AGG 0.592070 2_2:+51123828 None:intergenic
GTGCATGTGGTGTAAATAGG+CGG 0.604816 2_2:-51122007 Msa0256390:three_prime_UTR
CTGAAGAGGAGGTTCAAAGT+GGG 0.606883 2_2:-51122227 Msa0256390:CDS
TCTCTACAAATTCGACCCAT+GGG 0.608644 2_2:-51123700 Msa0256390:CDS
GTGTCCAATTGACATAATGT+GGG 0.609196 2_2:+51122294 None:intergenic
TTGGTGATATTGATATAGCT+AGG 0.609315 2_2:+51123924 None:intergenic
ACCAAGTTGAGAATTCGTCT+GGG 0.609603 2_2:-51122194 Msa0256390:CDS
ACGTGTCAACTCGCTAAGAA+CGG 0.615896 2_2:-51122496 Msa0256390:CDS
ATTCCAACAATGAACCGGAT+AGG 0.618682 2_2:-51122070 Msa0256390:exon
GCATGTGGTGTAAATAGGCG+GGG 0.620364 2_2:-51122005 Msa0256390:three_prime_UTR
TGGGACTAGGCCAAATAGAG+TGG 0.624566 2_2:-51123454 Msa0256390:CDS
ACCCGTGCATCCGACTGAAG+AGG 0.627654 2_2:-51122241 Msa0256390:CDS
TTCGGCTAGAGATATGGAGG+TGG 0.631945 2_2:-51121925 Msa0256390:three_prime_UTR
CGTGCATCCGACTGAAGAGG+AGG 0.634276 2_2:-51122238 Msa0256390:CDS
AGAACAAAACGCGATTCATG+TGG 0.635402 2_2:+51121767 None:intergenic
GTGGGGTAAAATCTAAAACC+AGG 0.636836 2_2:+51123804 None:intergenic
ACTGAAGAGGAGGTTCAAAG+TGG 0.641217 2_2:-51122228 Msa0256390:CDS
GTGATTCAAGAACGTCGTCG+AGG 0.650602 2_2:+51122553 None:intergenic
GACTCTTCACGAAACAACGG+TGG 0.660789 2_2:-51123279 Msa0256390:CDS
GTTCTTAGCGAGTTGACACG+TGG 0.662417 2_2:+51122498 None:intergenic
CTTGACTCTTCACGAAACAA+CGG 0.662587 2_2:-51123282 Msa0256390:CDS
TGAAGAGGAGGTTCAAAGTG+GGG 0.669043 2_2:-51122226 Msa0256390:CDS
GAATACACTCAATACAGCAA+CGG 0.669213 2_2:-51122600 Msa0256390:CDS
AAGGAACAATAGAATCATTG+GGG 0.673740 2_2:-51121851 Msa0256390:three_prime_UTR
AATTTCGGCTAGAGATATGG+AGG 0.677355 2_2:-51121928 Msa0256390:three_prime_UTR
GTGATATTTATAGTAACACA+TGG 0.678782 2_2:+51124043 None:intergenic
ACAGTAACAGGGTTTCAAGA+CGG 0.683973 2_2:-51122375 Msa0256390:CDS
ACGAAACAACGGTGGCACCA+AGG 0.687136 2_2:-51123271 Msa0256390:intron
ATGTGGCTAAAAGCATATGT+TGG 0.691957 2_2:+51121784 None:intergenic
ACTCACTTGGAAGAACCCAT+GGG 0.692817 2_2:+51123685 None:intergenic
TGTAATAGTCAAAGTGCATG+TGG 0.694581 2_2:-51122020 Msa0256390:three_prime_UTR
TGTCCAATTGACATAATGTG+GGG 0.696814 2_2:+51122295 None:intergenic
GGGTAAAATCTAAAACCAGG+AGG 0.717933 2_2:+51123807 None:intergenic
ATTCTATGAATCTATCCATG+GGG 0.736638 2_2:-51121891 Msa0256390:three_prime_UTR
CAAGAAGCTCTTCATCAGTG+GGG 0.743838 2_2:+51123787 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAACAAATTTTTTAAAAAAT+TGG - chr2_2:51122603-51122622 Msa0256390:CDS 10.0%
!!! CAACAAATTTTTTAAAAAAT+TGG - chr2_2:51122603-51122622 Msa0256390:CDS 10.0%
!! CTTTAATATAAATAAACCAT+AGG + chr2_2:51122113-51122132 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2_2:51122541-51122560 Msa0256390:CDS 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2_2:51122805-51122824 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG + chr2_2:51122837-51122856 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG + chr2_2:51122864-51122883 None:intergenic 15.0%
!! TGTTGAAAAATTAATTGATT+AGG - chr2_2:51123846-51123865 Msa0256390:CDS 15.0%
!! CTTTAATATAAATAAACCAT+AGG + chr2_2:51122113-51122132 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2_2:51122541-51122560 Msa0256390:CDS 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2_2:51122805-51122824 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG + chr2_2:51122837-51122856 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG + chr2_2:51122864-51122883 None:intergenic 15.0%
!! TGTTGAAAAATTAATTGATT+AGG - chr2_2:51123846-51123865 Msa0256390:CDS 15.0%
!!! TTTCTTTTTTTCTCAATAAC+CGG + chr2_2:51121667-51121686 None:intergenic 20.0%
!!! ATTTGTTTTTGTTAGAATCA+CGG - chr2_2:51122060-51122079 Msa0256390:three_prime_UTR 20.0%
!! GATTTAAATAATTGTACCTA+TGG - chr2_2:51122094-51122113 Msa0256390:CDS 20.0%
!! AATGAATGTATATAATACCT+TGG + chr2_2:51122423-51122442 None:intergenic 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2_2:51122665-51122684 Msa0256390:CDS 20.0%
!!! GATTGAACAACAAAATTTTT+AGG + chr2_2:51122749-51122768 None:intergenic 20.0%
!! AAATAAATAATATGGTGACA+AGG + chr2_2:51122829-51122848 None:intergenic 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2_2:51122873-51122892 None:intergenic 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2_2:51122911-51122930 Msa0256390:intron 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2_2:51122912-51122931 Msa0256390:intron 20.0%
!! AATTATCCCATAAAACAATT+TGG + chr2_2:51122921-51122940 None:intergenic 20.0%
!! CAAATAATAATTTCATGGAT+TGG - chr2_2:51123252-51123271 Msa0256390:intron 20.0%
!!! AAATGATTTTAATCAAGGTA+TGG - chr2_2:51123520-51123539 Msa0256390:CDS 20.0%
!!! AATGATTTTAATCAAGGTAT+GGG - chr2_2:51123521-51123540 Msa0256390:CDS 20.0%
!!! AAGTGGAAAAAATTGAATTT+TGG - chr2_2:51123718-51123737 Msa0256390:CDS 20.0%
!!! TTTCTTTTTTTCTCAATAAC+CGG + chr2_2:51121667-51121686 None:intergenic 20.0%
!!! ATTTGTTTTTGTTAGAATCA+CGG - chr2_2:51122060-51122079 Msa0256390:three_prime_UTR 20.0%
!! GATTTAAATAATTGTACCTA+TGG - chr2_2:51122094-51122113 Msa0256390:CDS 20.0%
!! AATGAATGTATATAATACCT+TGG + chr2_2:51122423-51122442 None:intergenic 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2_2:51122665-51122684 Msa0256390:CDS 20.0%
!!! GATTGAACAACAAAATTTTT+AGG + chr2_2:51122749-51122768 None:intergenic 20.0%
!! AAATAAATAATATGGTGACA+AGG + chr2_2:51122829-51122848 None:intergenic 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2_2:51122873-51122892 None:intergenic 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2_2:51122911-51122930 Msa0256390:intron 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2_2:51122912-51122931 Msa0256390:intron 20.0%
!! AATTATCCCATAAAACAATT+TGG + chr2_2:51122921-51122940 None:intergenic 20.0%
!! CAAATAATAATTTCATGGAT+TGG - chr2_2:51123252-51123271 Msa0256390:intron 20.0%
!!! AAATGATTTTAATCAAGGTA+TGG - chr2_2:51123520-51123539 Msa0256390:CDS 20.0%
!!! AATGATTTTAATCAAGGTAT+GGG - chr2_2:51123521-51123540 Msa0256390:CDS 20.0%
!!! AAGTGGAAAAAATTGAATTT+TGG - chr2_2:51123718-51123737 Msa0256390:CDS 20.0%
! GTGATATTTATAGTAACACA+TGG + chr2_2:51121634-51121653 None:intergenic 25.0%
!!! AATAATTGAGTTGAAGATGT+TGG + chr2_2:51121772-51121791 None:intergenic 25.0%
!! TGATCTTTGATTGATGATAA+TGG - chr2_2:51121806-51121825 Msa0256390:three_prime_UTR 25.0%
!! GATCTTTGATTGATGATAAT+GGG - chr2_2:51121807-51121826 Msa0256390:three_prime_UTR 25.0%
! ATAAACGTGTACAAAATAGT+TGG + chr2_2:51122023-51122042 None:intergenic 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2_2:51122275-51122294 Msa0256390:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2_2:51122317-51122336 Msa0256390:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2_2:51122360-51122379 None:intergenic 25.0%
! CTTTGTAATATTGAGAATTG+TGG + chr2_2:51122531-51122550 None:intergenic 25.0%
! TTAAAAAATTGGGTGATACA+TGG - chr2_2:51122614-51122633 Msa0256390:CDS 25.0%
! CAATTTGGTAAAACAGTAAA+AGG + chr2_2:51122906-51122925 None:intergenic 25.0%
! TGCTGCAAATAATAATTTCA+TGG - chr2_2:51123247-51123266 Msa0256390:intron 25.0%
!!! GGTTCAAATGATTTTAATCA+AGG - chr2_2:51123515-51123534 Msa0256390:CDS 25.0%
! GAAGTTAGAAGGAAAAAAAA+TGG - chr2_2:51123626-51123645 Msa0256390:intron 25.0%
!!! TCCACTTTTCTAATTTTGTT+AGG + chr2_2:51123705-51123724 None:intergenic 25.0%
!!! GATTAGGATCATTTAGTTTT+TGG - chr2_2:51123862-51123881 Msa0256390:exon 25.0%
! GTGATATTTATAGTAACACA+TGG + chr2_2:51121634-51121653 None:intergenic 25.0%
!!! AATAATTGAGTTGAAGATGT+TGG + chr2_2:51121772-51121791 None:intergenic 25.0%
!! TGATCTTTGATTGATGATAA+TGG - chr2_2:51121806-51121825 Msa0256390:three_prime_UTR 25.0%
!! GATCTTTGATTGATGATAAT+GGG - chr2_2:51121807-51121826 Msa0256390:three_prime_UTR 25.0%
! ATAAACGTGTACAAAATAGT+TGG + chr2_2:51122023-51122042 None:intergenic 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2_2:51122275-51122294 Msa0256390:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2_2:51122317-51122336 Msa0256390:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2_2:51122360-51122379 None:intergenic 25.0%
! CTTTGTAATATTGAGAATTG+TGG + chr2_2:51122531-51122550 None:intergenic 25.0%
! TTAAAAAATTGGGTGATACA+TGG - chr2_2:51122614-51122633 Msa0256390:CDS 25.0%
! CAATTTGGTAAAACAGTAAA+AGG + chr2_2:51122906-51122925 None:intergenic 25.0%
! TGCTGCAAATAATAATTTCA+TGG - chr2_2:51123247-51123266 Msa0256390:intron 25.0%
!!! GGTTCAAATGATTTTAATCA+AGG - chr2_2:51123515-51123534 Msa0256390:CDS 25.0%
! GAAGTTAGAAGGAAAAAAAA+TGG - chr2_2:51123626-51123645 Msa0256390:intron 25.0%
!!! TCCACTTTTCTAATTTTGTT+AGG + chr2_2:51123705-51123724 None:intergenic 25.0%
!!! GATTAGGATCATTTAGTTTT+TGG - chr2_2:51123862-51123881 Msa0256390:exon 25.0%
!!! GAAAGAGGTTTTTTTTCTCT+AGG + chr2_2:51121725-51121744 None:intergenic 30.0%
! TTGGTGATATTGATATAGCT+AGG + chr2_2:51121753-51121772 None:intergenic 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2_2:51122134-51122153 Msa0256390:CDS 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2_2:51122139-51122158 Msa0256390:CDS 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG - chr2_2:51122162-51122181 Msa0256390:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2_2:51122186-51122205 Msa0256390:CDS 30.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2_2:51122287-51122306 Msa0256390:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2_2:51122560-51122579 Msa0256390:CDS 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2_2:51122798-51122817 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2_2:51122799-51122818 None:intergenic 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2_2:51123329-51123348 Msa0256390:CDS 30.0%
GCCTAACAAAATTAGAAAAG+TGG - chr2_2:51123701-51123720 Msa0256390:CDS 30.0%
!! TGAATTTTGGTCCTCAATTT+CGG - chr2_2:51123731-51123750 Msa0256390:CDS 30.0%
ACATTCTATGAATCTATCCA+TGG - chr2_2:51123781-51123800 Msa0256390:CDS 30.0%
CATTCTATGAATCTATCCAT+GGG - chr2_2:51123782-51123801 Msa0256390:CDS 30.0%
ATTCTATGAATCTATCCATG+GGG - chr2_2:51123783-51123802 Msa0256390:CDS 30.0%
TGAAGGAACAATAGAATCAT+TGG - chr2_2:51123821-51123840 Msa0256390:CDS 30.0%
GAAGGAACAATAGAATCATT+GGG - chr2_2:51123822-51123841 Msa0256390:CDS 30.0%
AAGGAACAATAGAATCATTG+GGG - chr2_2:51123823-51123842 Msa0256390:CDS 30.0%
TTGCATTTGTTTGCAATGTT+AGG - chr2_2:51123951-51123970 Msa0256390:five_prime_UTR 30.0%
!!! ACTTTTATGTAGCATTGATG+TGG + chr2_2:51124015-51124034 None:intergenic 30.0%
!!! GAAAGAGGTTTTTTTTCTCT+AGG + chr2_2:51121725-51121744 None:intergenic 30.0%
! TTGGTGATATTGATATAGCT+AGG + chr2_2:51121753-51121772 None:intergenic 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2_2:51122134-51122153 Msa0256390:CDS 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2_2:51122139-51122158 Msa0256390:CDS 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG - chr2_2:51122162-51122181 Msa0256390:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2_2:51122186-51122205 Msa0256390:CDS 30.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2_2:51122287-51122306 Msa0256390:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2_2:51122560-51122579 Msa0256390:CDS 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2_2:51122798-51122817 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2_2:51122799-51122818 None:intergenic 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2_2:51123329-51123348 Msa0256390:CDS 30.0%
GCCTAACAAAATTAGAAAAG+TGG - chr2_2:51123701-51123720 Msa0256390:CDS 30.0%
!! TGAATTTTGGTCCTCAATTT+CGG - chr2_2:51123731-51123750 Msa0256390:CDS 30.0%
ACATTCTATGAATCTATCCA+TGG - chr2_2:51123781-51123800 Msa0256390:CDS 30.0%
CATTCTATGAATCTATCCAT+GGG - chr2_2:51123782-51123801 Msa0256390:CDS 30.0%
ATTCTATGAATCTATCCATG+GGG - chr2_2:51123783-51123802 Msa0256390:CDS 30.0%
TGAAGGAACAATAGAATCAT+TGG - chr2_2:51123821-51123840 Msa0256390:CDS 30.0%
GAAGGAACAATAGAATCATT+GGG - chr2_2:51123822-51123841 Msa0256390:CDS 30.0%
AAGGAACAATAGAATCATTG+GGG - chr2_2:51123823-51123842 Msa0256390:CDS 30.0%
TTGCATTTGTTTGCAATGTT+AGG - chr2_2:51123951-51123970 Msa0256390:five_prime_UTR 30.0%
!!! ACTTTTATGTAGCATTGATG+TGG + chr2_2:51124015-51124034 None:intergenic 30.0%
TATAGCTAGGTTGTAGAAAG+AGG + chr2_2:51121740-51121759 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2_2:51121915-51121934 Msa0256390:three_prime_UTR 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2_2:51122149-51122168 Msa0256390:CDS 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2_2:51122200-51122219 None:intergenic 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2_2:51122200-51122219 Msa0256390:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2_2:51122201-51122220 Msa0256390:CDS 35.0%
TATAATCTTGTCTGTTCCAG+TGG + chr2_2:51122267-51122286 None:intergenic 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2_2:51122332-51122351 Msa0256390:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2_2:51122350-51122369 None:intergenic 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2_2:51122348-51122367 Msa0256390:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2_2:51122559-51122578 Msa0256390:CDS 35.0%
CAGTAAAAGGTCAAAAACAG+AGG + chr2_2:51122893-51122912 None:intergenic 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2_2:51122979-51122998 Msa0256390:intron 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2_2:51122980-51122999 Msa0256390:intron 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2_2:51123035-51123054 Msa0256390:intron 35.0%
GAATACACTCAATACAGCAA+CGG - chr2_2:51123074-51123093 Msa0256390:intron 35.0%
GATTCATCTTCTCTTCTTGT+TGG + chr2_2:51123214-51123233 None:intergenic 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2_2:51123287-51123306 Msa0256390:CDS 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2_2:51123288-51123307 Msa0256390:CDS 35.0%
TGTCCAATTGACATAATGTG+GGG + chr2_2:51123382-51123401 None:intergenic 35.0%
GTGTCCAATTGACATAATGT+GGG + chr2_2:51123383-51123402 None:intergenic 35.0%
AGTGTCCAATTGACATAATG+TGG + chr2_2:51123384-51123403 None:intergenic 35.0%
ATTGGACACTTCCGTTATTA+CGG - chr2_2:51123394-51123413 Msa0256390:CDS 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG + chr2_2:51123408-51123427 None:intergenic 35.0%
TTTGGATTCCAACAATGAAC+CGG - chr2_2:51123599-51123618 Msa0256390:intron 35.0%
TTTCCTTCTAACTTCCTATC+CGG + chr2_2:51123621-51123640 None:intergenic 35.0%
TGTAATAGTCAAAGTGCATG+TGG - chr2_2:51123654-51123673 Msa0256390:intron 35.0%
AAAGTGCATGTGGTGTAAAT+AGG - chr2_2:51123664-51123683 Msa0256390:intron 35.0%
GGAGATAAAGTAGTGAATGA+AGG - chr2_2:51123804-51123823 Msa0256390:CDS 35.0%
! ATGTGGCTAAAAGCATATGT+TGG + chr2_2:51123893-51123912 None:intergenic 35.0%
TTGTTTGCAATGTTAGGCTT+TGG - chr2_2:51123957-51123976 Msa0256390:five_prime_UTR 35.0%
! CATTGATGTGGTTAGCTAAA+AGG + chr2_2:51124003-51124022 None:intergenic 35.0%
TATAGCTAGGTTGTAGAAAG+AGG + chr2_2:51121740-51121759 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2_2:51121915-51121934 Msa0256390:three_prime_UTR 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2_2:51122149-51122168 Msa0256390:CDS 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2_2:51122200-51122219 None:intergenic 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2_2:51122200-51122219 Msa0256390:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2_2:51122201-51122220 Msa0256390:CDS 35.0%
TATAATCTTGTCTGTTCCAG+TGG + chr2_2:51122267-51122286 None:intergenic 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2_2:51122332-51122351 Msa0256390:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2_2:51122350-51122369 None:intergenic 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2_2:51122348-51122367 Msa0256390:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2_2:51122559-51122578 Msa0256390:CDS 35.0%
CAGTAAAAGGTCAAAAACAG+AGG + chr2_2:51122893-51122912 None:intergenic 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2_2:51122979-51122998 Msa0256390:intron 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2_2:51122980-51122999 Msa0256390:intron 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2_2:51123035-51123054 Msa0256390:intron 35.0%
GAATACACTCAATACAGCAA+CGG - chr2_2:51123074-51123093 Msa0256390:intron 35.0%
GATTCATCTTCTCTTCTTGT+TGG + chr2_2:51123214-51123233 None:intergenic 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2_2:51123287-51123306 Msa0256390:CDS 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2_2:51123288-51123307 Msa0256390:CDS 35.0%
TGTCCAATTGACATAATGTG+GGG + chr2_2:51123382-51123401 None:intergenic 35.0%
GTGTCCAATTGACATAATGT+GGG + chr2_2:51123383-51123402 None:intergenic 35.0%
AGTGTCCAATTGACATAATG+TGG + chr2_2:51123384-51123403 None:intergenic 35.0%
ATTGGACACTTCCGTTATTA+CGG - chr2_2:51123394-51123413 Msa0256390:CDS 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG + chr2_2:51123408-51123427 None:intergenic 35.0%
TTTGGATTCCAACAATGAAC+CGG - chr2_2:51123599-51123618 Msa0256390:intron 35.0%
TTTCCTTCTAACTTCCTATC+CGG + chr2_2:51123621-51123640 None:intergenic 35.0%
TGTAATAGTCAAAGTGCATG+TGG - chr2_2:51123654-51123673 Msa0256390:intron 35.0%
AAAGTGCATGTGGTGTAAAT+AGG - chr2_2:51123664-51123683 Msa0256390:intron 35.0%
GGAGATAAAGTAGTGAATGA+AGG - chr2_2:51123804-51123823 Msa0256390:CDS 35.0%
! ATGTGGCTAAAAGCATATGT+TGG + chr2_2:51123893-51123912 None:intergenic 35.0%
TTGTTTGCAATGTTAGGCTT+TGG - chr2_2:51123957-51123976 Msa0256390:five_prime_UTR 35.0%
! CATTGATGTGGTTAGCTAAA+AGG + chr2_2:51124003-51124022 None:intergenic 35.0%
AAATATCACCCCATGTCTAC+CGG - chr2_2:51121645-51121664 Msa0256390:three_prime_UTR 40.0%
TCTCAATAACCGGTAGACAT+GGG + chr2_2:51121657-51121676 None:intergenic 40.0%
TTCTCAATAACCGGTAGACA+TGG + chr2_2:51121658-51121677 None:intergenic 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2_2:51121849-51121868 None:intergenic 40.0%
! GGGTAAAATCTAAAACCAGG+AGG + chr2_2:51121870-51121889 None:intergenic 40.0%
! GTGGGGTAAAATCTAAAACC+AGG + chr2_2:51121873-51121892 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2_2:51121891-51121910 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2_2:51121892-51121911 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr2_2:51121973-51121992 Msa0256390:three_prime_UTR 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr2_2:51121974-51121993 Msa0256390:three_prime_UTR 40.0%
! GTTGGTGAAGTTAACTCACT+TGG + chr2_2:51122005-51122024 None:intergenic 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2_2:51122392-51122411 Msa0256390:CDS 40.0%
AAGCAATGGTCGTCAATTTG+TGG + chr2_2:51123149-51123168 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2_2:51123299-51123318 Msa0256390:CDS 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2_2:51123311-51123330 Msa0256390:CDS 40.0%
TGTCCCCACATTATGTCAAT+TGG - chr2_2:51123376-51123395 Msa0256390:CDS 40.0%
! AACCAAGTTGAGAATTCGTC+TGG - chr2_2:51123479-51123498 Msa0256390:CDS 40.0%
! ACCAAGTTGAGAATTCGTCT+GGG - chr2_2:51123480-51123499 Msa0256390:CDS 40.0%
AGGTATGGGATACACTAATC+CGG - chr2_2:51123535-51123554 Msa0256390:intron 40.0%
TGTTGGAATCCAAATCCAAC+CGG + chr2_2:51123593-51123612 None:intergenic 40.0%
ATTCCAACAATGAACCGGAT+AGG - chr2_2:51123604-51123623 Msa0256390:intron 40.0%
! TAAATAGGCGGGGATTCTTT+TGG - chr2_2:51123679-51123698 Msa0256390:intron 40.0%
CATATCTCTAGCCGAAATTG+AGG + chr2_2:51123745-51123764 None:intergenic 40.0%
CTCAATTTCGGCTAGAGATA+TGG - chr2_2:51123743-51123762 Msa0256390:CDS 40.0%
AATTTCGGCTAGAGATATGG+AGG - chr2_2:51123746-51123765 Msa0256390:CDS 40.0%
TTCACTACTTTATCTCCCCA+TGG + chr2_2:51123801-51123820 None:intergenic 40.0%
AGAACAAAACGCGATTCATG+TGG + chr2_2:51123910-51123929 None:intergenic 40.0%
AAATATCACCCCATGTCTAC+CGG - chr2_2:51121645-51121664 Msa0256390:three_prime_UTR 40.0%
TCTCAATAACCGGTAGACAT+GGG + chr2_2:51121657-51121676 None:intergenic 40.0%
TTCTCAATAACCGGTAGACA+TGG + chr2_2:51121658-51121677 None:intergenic 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2_2:51121849-51121868 None:intergenic 40.0%
! GGGTAAAATCTAAAACCAGG+AGG + chr2_2:51121870-51121889 None:intergenic 40.0%
! GTGGGGTAAAATCTAAAACC+AGG + chr2_2:51121873-51121892 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2_2:51121891-51121910 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2_2:51121892-51121911 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr2_2:51121973-51121992 Msa0256390:three_prime_UTR 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr2_2:51121974-51121993 Msa0256390:three_prime_UTR 40.0%
! GTTGGTGAAGTTAACTCACT+TGG + chr2_2:51122005-51122024 None:intergenic 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2_2:51122392-51122411 Msa0256390:CDS 40.0%
AAGCAATGGTCGTCAATTTG+TGG + chr2_2:51123149-51123168 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2_2:51123299-51123318 Msa0256390:CDS 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2_2:51123311-51123330 Msa0256390:CDS 40.0%
TGTCCCCACATTATGTCAAT+TGG - chr2_2:51123376-51123395 Msa0256390:CDS 40.0%
! AACCAAGTTGAGAATTCGTC+TGG - chr2_2:51123479-51123498 Msa0256390:CDS 40.0%
! ACCAAGTTGAGAATTCGTCT+GGG - chr2_2:51123480-51123499 Msa0256390:CDS 40.0%
AGGTATGGGATACACTAATC+CGG - chr2_2:51123535-51123554 Msa0256390:intron 40.0%
TGTTGGAATCCAAATCCAAC+CGG + chr2_2:51123593-51123612 None:intergenic 40.0%
ATTCCAACAATGAACCGGAT+AGG - chr2_2:51123604-51123623 Msa0256390:intron 40.0%
! TAAATAGGCGGGGATTCTTT+TGG - chr2_2:51123679-51123698 Msa0256390:intron 40.0%
CATATCTCTAGCCGAAATTG+AGG + chr2_2:51123745-51123764 None:intergenic 40.0%
CTCAATTTCGGCTAGAGATA+TGG - chr2_2:51123743-51123762 Msa0256390:CDS 40.0%
AATTTCGGCTAGAGATATGG+AGG - chr2_2:51123746-51123765 Msa0256390:CDS 40.0%
TTCACTACTTTATCTCCCCA+TGG + chr2_2:51123801-51123820 None:intergenic 40.0%
AGAACAAAACGCGATTCATG+TGG + chr2_2:51123910-51123929 None:intergenic 40.0%
CTCAATAACCGGTAGACATG+GGG + chr2_2:51121656-51121675 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2_2:51121852-51121871 Msa0256390:three_prime_UTR 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2_2:51121890-51121909 None:intergenic 45.0%
ACTCACTTGGAAGAACCCAT+GGG + chr2_2:51121992-51122011 None:intergenic 45.0%
AACTCACTTGGAAGAACCCA+TGG + chr2_2:51121993-51122012 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG - chr2_2:51122207-51122226 Msa0256390:CDS 45.0%
CTATTTGGCCTAGTCCCATT+TGG + chr2_2:51122218-51122237 None:intergenic 45.0%
CAAATAGAGTGGCTGGATCT+GGG - chr2_2:51122231-51122250 Msa0256390:CDS 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2_2:51123047-51123066 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2_2:51123178-51123197 Msa0256390:intron 45.0%
GACATAATGTGGGGACAGAA+GGG + chr2_2:51123373-51123392 None:intergenic 45.0%
TGACATAATGTGGGGACAGA+AGG + chr2_2:51123374-51123393 None:intergenic 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2_2:51123446-51123465 None:intergenic 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2_2:51123446-51123465 Msa0256390:CDS 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2_2:51123447-51123466 Msa0256390:CDS 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2_2:51123448-51123467 Msa0256390:CDS 45.0%
ACCCAGACGAATTCTCAACT+TGG + chr2_2:51123484-51123503 None:intergenic 45.0%
!!! TCGTCTGGGTTTTTTCAACG+CGG - chr2_2:51123494-51123513 Msa0256390:CDS 45.0%
ACCGGGTATCTAAACCCAAA+CGG + chr2_2:51123566-51123585 None:intergenic 45.0%
GTTTAGATACCCGGTTCAAC+CGG - chr2_2:51123571-51123590 Msa0256390:intron 45.0%
CTTCCTATCCGGTTCATTGT+TGG + chr2_2:51123610-51123629 None:intergenic 45.0%
GAACCGGATAGGAAGTTAGA+AGG - chr2_2:51123615-51123634 Msa0256390:intron 45.0%
GTGCATGTGGTGTAAATAGG+CGG - chr2_2:51123667-51123686 Msa0256390:intron 45.0%
TGCATGTGGTGTAAATAGGC+GGG - chr2_2:51123668-51123687 Msa0256390:intron 45.0%
CTCAATAACCGGTAGACATG+GGG + chr2_2:51121656-51121675 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2_2:51121852-51121871 Msa0256390:three_prime_UTR 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2_2:51121890-51121909 None:intergenic 45.0%
ACTCACTTGGAAGAACCCAT+GGG + chr2_2:51121992-51122011 None:intergenic 45.0%
AACTCACTTGGAAGAACCCA+TGG + chr2_2:51121993-51122012 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG - chr2_2:51122207-51122226 Msa0256390:CDS 45.0%
CTATTTGGCCTAGTCCCATT+TGG + chr2_2:51122218-51122237 None:intergenic 45.0%
CAAATAGAGTGGCTGGATCT+GGG - chr2_2:51122231-51122250 Msa0256390:CDS 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2_2:51123047-51123066 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2_2:51123178-51123197 Msa0256390:intron 45.0%
GACATAATGTGGGGACAGAA+GGG + chr2_2:51123373-51123392 None:intergenic 45.0%
TGACATAATGTGGGGACAGA+AGG + chr2_2:51123374-51123393 None:intergenic 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2_2:51123446-51123465 None:intergenic 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2_2:51123446-51123465 Msa0256390:CDS 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2_2:51123447-51123466 Msa0256390:CDS 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2_2:51123448-51123467 Msa0256390:CDS 45.0%
ACCCAGACGAATTCTCAACT+TGG + chr2_2:51123484-51123503 None:intergenic 45.0%
!!! TCGTCTGGGTTTTTTCAACG+CGG - chr2_2:51123494-51123513 Msa0256390:CDS 45.0%
ACCGGGTATCTAAACCCAAA+CGG + chr2_2:51123566-51123585 None:intergenic 45.0%
GTTTAGATACCCGGTTCAAC+CGG - chr2_2:51123571-51123590 Msa0256390:intron 45.0%
CTTCCTATCCGGTTCATTGT+TGG + chr2_2:51123610-51123629 None:intergenic 45.0%
GAACCGGATAGGAAGTTAGA+AGG - chr2_2:51123615-51123634 Msa0256390:intron 45.0%
GTGCATGTGGTGTAAATAGG+CGG - chr2_2:51123667-51123686 Msa0256390:intron 45.0%
TGCATGTGGTGTAAATAGGC+GGG - chr2_2:51123668-51123687 Msa0256390:intron 45.0%
!!! AACAAATTTTTTAAAAAATT+GGG - chr2_2:51122604-51122623 Msa0256390:CDS 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2_2:51122712-51122731 None:intergenic 5.0%
!!! AACAAATTTTTTAAAAAATT+GGG - chr2_2:51122604-51122623 Msa0256390:CDS 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2_2:51122712-51122731 None:intergenic 5.0%
TGGGACTAGGCCAAATAGAG+TGG - chr2_2:51122220-51122239 Msa0256390:CDS 50.0%
ACTAGGCCAAATAGAGTGGC+TGG - chr2_2:51122224-51122243 Msa0256390:CDS 50.0%
CCAGATCCAGCCACTCTATT+TGG + chr2_2:51122233-51122252 None:intergenic 50.0%
CCAAATAGAGTGGCTGGATC+TGG - chr2_2:51122230-51122249 Msa0256390:CDS 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG - chr2_2:51122248-51122267 Msa0256390:CDS 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2_2:51122395-51122414 Msa0256390:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG + chr2_2:51123053-51123072 None:intergenic 50.0%
TTCAAGAACGTCGTCGAGGT+GGG + chr2_2:51123120-51123139 None:intergenic 50.0%
ATTCAAGAACGTCGTCGAGG+TGG + chr2_2:51123121-51123140 None:intergenic 50.0%
GTGATTCAAGAACGTCGTCG+AGG + chr2_2:51123124-51123143 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2_2:51123179-51123198 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG + chr2_2:51123364-51123383 None:intergenic 50.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2_2:51123548-51123567 Msa0256390:intron 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2_2:51123549-51123568 Msa0256390:intron 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2_2:51123557-51123576 None:intergenic 50.0%
CCGGGTATCTAAACCCAAAC+GGG + chr2_2:51123565-51123584 None:intergenic 50.0%
! CCCGTTTGGGTTTAGATACC+CGG - chr2_2:51123562-51123581 Msa0256390:intron 50.0%
CAAATCCAACCGGTTGAACC+GGG + chr2_2:51123583-51123602 None:intergenic 50.0%
CCAAATCCAACCGGTTGAAC+CGG + chr2_2:51123584-51123603 None:intergenic 50.0%
GCATGTGGTGTAAATAGGCG+GGG - chr2_2:51123669-51123688 Msa0256390:intron 50.0%
TTCGGCTAGAGATATGGAGG+TGG - chr2_2:51123749-51123768 Msa0256390:CDS 50.0%
TGGGACTAGGCCAAATAGAG+TGG - chr2_2:51122220-51122239 Msa0256390:CDS 50.0%
ACTAGGCCAAATAGAGTGGC+TGG - chr2_2:51122224-51122243 Msa0256390:CDS 50.0%
CCAGATCCAGCCACTCTATT+TGG + chr2_2:51122233-51122252 None:intergenic 50.0%
CCAAATAGAGTGGCTGGATC+TGG - chr2_2:51122230-51122249 Msa0256390:CDS 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG - chr2_2:51122248-51122267 Msa0256390:CDS 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2_2:51122395-51122414 Msa0256390:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG + chr2_2:51123053-51123072 None:intergenic 50.0%
TTCAAGAACGTCGTCGAGGT+GGG + chr2_2:51123120-51123139 None:intergenic 50.0%
ATTCAAGAACGTCGTCGAGG+TGG + chr2_2:51123121-51123140 None:intergenic 50.0%
GTGATTCAAGAACGTCGTCG+AGG + chr2_2:51123124-51123143 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2_2:51123179-51123198 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG + chr2_2:51123364-51123383 None:intergenic 50.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2_2:51123548-51123567 Msa0256390:intron 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2_2:51123549-51123568 Msa0256390:intron 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2_2:51123557-51123576 None:intergenic 50.0%
CCGGGTATCTAAACCCAAAC+GGG + chr2_2:51123565-51123584 None:intergenic 50.0%
! CCCGTTTGGGTTTAGATACC+CGG - chr2_2:51123562-51123581 Msa0256390:intron 50.0%
CAAATCCAACCGGTTGAACC+GGG + chr2_2:51123583-51123602 None:intergenic 50.0%
CCAAATCCAACCGGTTGAAC+CGG + chr2_2:51123584-51123603 None:intergenic 50.0%
GCATGTGGTGTAAATAGGCG+GGG - chr2_2:51123669-51123688 Msa0256390:intron 50.0%
TTCGGCTAGAGATATGGAGG+TGG - chr2_2:51123749-51123768 Msa0256390:CDS 50.0%
GAGTGGCTGGATCTGGGTAT+TGG - chr2_2:51122237-51122256 Msa0256390:CDS 55.0%
ACGAAACAACGGTGGCACCA+AGG - chr2_2:51122403-51122422 Msa0256390:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG + chr2_2:51123163-51123182 None:intergenic 55.0%
TCCTCTTCAGTCGGATGCAC+GGG + chr2_2:51123437-51123456 None:intergenic 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2_2:51123438-51123457 None:intergenic 55.0%
AGATACCCGGTTCAACCGGT+TGG - chr2_2:51123575-51123594 Msa0256390:intron 55.0%
CCGGTTCAACCGGTTGGATT+TGG - chr2_2:51123581-51123600 Msa0256390:intron 55.0%
GAGTGGCTGGATCTGGGTAT+TGG - chr2_2:51122237-51122256 Msa0256390:CDS 55.0%
ACGAAACAACGGTGGCACCA+AGG - chr2_2:51122403-51122422 Msa0256390:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG + chr2_2:51123163-51123182 None:intergenic 55.0%
TCCTCTTCAGTCGGATGCAC+GGG + chr2_2:51123437-51123456 None:intergenic 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2_2:51123438-51123457 None:intergenic 55.0%
AGATACCCGGTTCAACCGGT+TGG - chr2_2:51123575-51123594 Msa0256390:intron 55.0%
CCGGTTCAACCGGTTGGATT+TGG - chr2_2:51123581-51123600 Msa0256390:intron 55.0%
ACCCGTGCATCCGACTGAAG+AGG - chr2_2:51123433-51123452 Msa0256390:CDS 60.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2_2:51123436-51123455 Msa0256390:CDS 60.0%
ACCCGTGCATCCGACTGAAG+AGG - chr2_2:51123433-51123452 Msa0256390:CDS 60.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2_2:51123436-51123455 Msa0256390:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 51121625 51124071 51121625 ID=Msa0256390;Name=Msa0256390
chr2_2 mRNA 51121625 51124071 51121625 ID=Msa0256390-mRNA-1;Parent=Msa0256390;Name=Msa0256390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=194|1|1|1|1|1|3|455|360
chr2_2 exon 51121625 51122706 51121625 ID=Msa0256390-mRNA-1:exon:15419;Parent=Msa0256390-mRNA-1
chr2_2 exon 51123272 51123540 51123272 ID=Msa0256390-mRNA-1:exon:15418;Parent=Msa0256390-mRNA-1
chr2_2 exon 51123691 51124071 51123691 ID=Msa0256390-mRNA-1:exon:15417;Parent=Msa0256390-mRNA-1
chr2_2 five_prime_UTR 51123878 51124071 51123878 ID=Msa0256390-mRNA-1:five_prime_utr;Parent=Msa0256390-mRNA-1
chr2_2 CDS 51123691 51123877 51123691 ID=Msa0256390-mRNA-1:cds;Parent=Msa0256390-mRNA-1
chr2_2 CDS 51123272 51123540 51123272 ID=Msa0256390-mRNA-1:cds;Parent=Msa0256390-mRNA-1
chr2_2 CDS 51122080 51122706 51122080 ID=Msa0256390-mRNA-1:cds;Parent=Msa0256390-mRNA-1
chr2_2 three_prime_UTR 51121625 51122079 51121625 ID=Msa0256390-mRNA-1:three_prime_utr;Parent=Msa0256390-mRNA-1
Gene Sequence

>Msa0256390

ATGATAATGGGAATTCAAGACAAAGATCCTCTTGCACAATTGAGTTTACCTCCTGGTTTTAGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTCGACCCATGGGTTCTTCCAAGTAAGGCAATTTTTGGTGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACTAGGCCAAATAGAGTGGCTGGATCTGGGTATTGGAAAGCCACTGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATCAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGACTACTTGACTCTTCACGAAACAACGGTGGCACCAAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAACTCAAGCGCACAAAAACCTATTCCAAATGGCGTCGTTTCAAGCAGAGAATACACTCAATACAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGACGTTCTTGAATCACTTCCACAAATTGACGACCATTGCTTCAAGCTGCCACGTGTCAACTCGCTAAGAACGGCGCAACATCACCAACAAGAAGAGAAGATGAATCTTCAAAATTTAAATGCTGCAAATAATAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGACGGTCAAACTCAAGGAATGATGAATTTTAGTGGTTGCAATGACCTTTATGTCCCTTCTGTCCCCACATTATGTCAATTGGACACTTCCGTTATTACGGAGAAAACTAGCAAGATACCCGTGCATCCGACTGAAGAGGAGGTTCAAAGTGGGGCGAGAGCAAACCAAGTTGAGAATTCGTCTGGGTTTTTTCAACGCGGTTCAAATGATTTTAATCAAGGTATGGGATACACTAATCCGGTTGACCCGTTTGGGTTTAGATACCCGGTTCAACCGGTTGGATTTGGATTCCAACAATGA
Protein sequence

>Msa0256390

MIMGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVVSSREYTQYSNGSSSSSSSHLDDVLESLPQIDDHCFKLPRVNSLRTAQHHQQEEKMNLQNLNAANNNFMDWSNSSSILNTVTGFQDGQTQGMMNFSGCNDLYVPSVPTLCQLDTSVITEKTSKIPVHPTEEEVQSGARANQVENSSGFFQRGSNDFNQGMGYTNPVDPFGFRYPVQPVGFGFQQ*