AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0295820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295820 MtrunA17_Chr2g0318081 93.889 360 16 2 1 360 1 354 0.0 693
Msa0295820 MtrunA17_Chr8g0359921 65.616 349 95 8 3 349 1 326 3.12e-150 426
Msa0295820 MtrunA17_Chr3g0124761 66.279 172 54 2 12 180 3 173 2.97e-78 242
Msa0295820 MtrunA17_Chr2g0318101 64.162 173 49 2 13 172 12 184 1.38e-76 239
Msa0295820 MtrunA17_Chr8g0384721 67.702 161 47 2 14 170 5 164 1.17e-75 235
Msa0295820 MtrunA17_Chr4g0047841 63.388 183 42 3 16 173 15 197 6.46e-75 235
Msa0295820 MtrunA17_Chr3g0130731 66.049 162 51 2 12 170 3 163 9.35e-74 230
Msa0295820 MtrunA17_Chr7g0252971 63.314 169 49 3 13 168 5 173 3.53e-73 230
Msa0295820 MtrunA17_Chr7g0263931 62.130 169 58 3 7 169 2 170 5.72e-71 224
Msa0295820 MtrunA17_Chr4g0042561 63.057 157 54 1 12 164 5 161 1.96e-70 221
Msa0295820 MtrunA17_Chr5g0417791 63.871 155 52 1 14 164 1 155 2.47e-70 220
Msa0295820 MtrunA17_Chr2g0326361 59.756 164 60 2 12 169 10 173 2.05e-68 218
Msa0295820 MtrunA17_Chr2g0309891 55.063 158 68 2 11 165 1 158 1.84e-60 198
Msa0295820 MtrunA17_Chr5g0433781 56.329 158 67 1 11 166 1 158 3.76e-60 204
Msa0295820 MtrunA17_Chr6g0484441 55.769 156 67 1 16 171 5 158 3.70e-59 194
Msa0295820 MtrunA17_Chr3g0091921 55.090 167 73 1 13 177 13 179 2.25e-58 191
Msa0295820 MtrunA17_Chr6g0453451 52.000 175 82 1 6 178 10 184 2.69e-58 191
Msa0295820 MtrunA17_Chr3g0109821 50.262 191 90 3 11 198 1 189 5.48e-58 199
Msa0295820 MtrunA17_Chr4g0060931 53.293 167 76 1 13 177 14 180 1.16e-57 191
Msa0295820 MtrunA17_Chr7g0253011 48.792 207 86 4 14 212 15 209 4.65e-57 190
Msa0295820 MtrunA17_Chr6g0481091 51.592 157 74 1 11 165 1 157 1.05e-56 184
Msa0295820 MtrunA17_Chr5g0417001 52.083 192 80 6 7 187 6 196 1.33e-56 189
Msa0295820 MtrunA17_Chr3g0139331 54.430 158 68 2 15 170 10 165 9.66e-56 186
Msa0295820 MtrunA17_Chr4g0076731 56.051 157 62 3 18 171 56 208 1.83e-55 187
Msa0295820 MtrunA17_Chr4g0017921 55.263 152 62 2 16 164 8 156 1.79e-54 182
Msa0295820 MtrunA17_Chr1g0147421 53.459 159 69 3 15 170 26 182 2.43e-54 182
Msa0295820 MtrunA17_Chr6g0453131 52.469 162 67 2 16 167 15 176 4.30e-54 182
Msa0295820 MtrunA17_Chr5g0405211 44.670 197 101 3 16 206 8 202 4.83e-54 181
Msa0295820 MtrunA17_Chr8g0361731 48.168 191 87 5 18 196 16 206 7.22e-54 182
Msa0295820 MtrunA17_Chr2g0309331 50.595 168 74 4 12 172 6 171 3.59e-53 179
Msa0295820 MtrunA17_Chr2g0316971 55.000 160 60 3 16 167 23 178 5.48e-53 179
Msa0295820 MtrunA17_Chr1g0200561 47.399 173 86 2 16 185 19 189 1.06e-52 178
Msa0295820 MtrunA17_Chr5g0400461 51.786 168 67 4 11 168 1 164 1.66e-52 177
Msa0295820 MtrunA17_Chr8g0372121 48.765 162 78 2 11 169 1 160 2.73e-52 176
Msa0295820 MtrunA17_Chr6g0461661 46.759 216 87 6 14 213 16 219 9.69e-52 176
Msa0295820 MtrunA17_Chr5g0442771 47.150 193 89 3 18 198 20 211 1.11e-51 174
Msa0295820 MtrunA17_Chr4g0018391 50.658 152 70 2 16 164 7 156 1.52e-51 174
Msa0295820 MtrunA17_Chr8g0346001 47.879 165 74 2 12 164 11 175 2.35e-51 176
Msa0295820 MtrunA17_Chr7g0214071 54.658 161 66 3 12 170 11 166 4.49e-51 171
Msa0295820 MtrunA17_Chr4g0054791 44.500 200 105 3 15 209 5 203 4.81e-51 172
Msa0295820 MtrunA17_Chr2g0312321 44.898 196 91 5 11 201 6 189 1.84e-50 171
Msa0295820 MtrunA17_Chr4g0056541 51.316 152 69 2 16 164 7 156 2.26e-50 172
Msa0295820 MtrunA17_Chr7g0217721 38.224 259 136 4 13 255 16 266 3.33e-50 171
Msa0295820 MtrunA17_Chr2g0311661 46.798 203 83 6 18 202 23 218 4.05e-50 169
Msa0295820 MtrunA17_Chr2g0311651 49.133 173 72 4 18 174 24 196 8.88e-49 166
Msa0295820 MtrunA17_Chr5g0398971 50.000 154 70 4 16 164 7 158 1.03e-48 167
Msa0295820 MtrunA17_Chr1g0183741 42.326 215 89 6 3 196 1 201 4.90e-47 160
Msa0295820 MtrunA17_Chr7g0217711 54.264 129 59 0 13 141 16 144 5.48e-47 157
Msa0295820 MtrunA17_Chr5g0428991 50.000 164 77 2 6 164 12 175 1.42e-46 167
Msa0295820 MtrunA17_Chr3g0130101 46.309 149 78 1 18 164 9 157 5.34e-46 160
Msa0295820 MtrunA17_Chr7g0261411 48.148 162 74 3 3 162 1 154 1.06e-45 158
Msa0295820 MtrunA17_Chr3g0128151 48.750 160 80 1 11 168 17 176 1.75e-45 164
Msa0295820 MtrunA17_Chr8g0364791 42.614 176 96 2 11 184 1 173 1.94e-45 161
Msa0295820 MtrunA17_Chr3g0128111 48.052 154 74 3 19 168 45 196 7.10e-45 154
Msa0295820 MtrunA17_Chr1g0201021 45.283 159 85 1 14 170 17 175 8.85e-45 162
Msa0295820 MtrunA17_Chr1g0197351 48.521 169 76 3 15 175 41 206 1.70e-44 159
Msa0295820 MtrunA17_Chr3g0092671 38.889 234 121 6 18 248 7 221 1.99e-44 160
Msa0295820 MtrunA17_Chr4g0038751 49.375 160 72 4 13 169 13 166 2.20e-44 154
Msa0295820 MtrunA17_Chr3g0144271 47.619 168 80 4 1 162 8 173 7.21e-44 156
Msa0295820 MtrunA17_Chr1g0197361 48.718 156 76 3 18 170 10 164 9.55e-44 159
Msa0295820 MtrunA17_Chr8g0384201 41.477 176 98 2 11 184 1 173 1.35e-43 157
Msa0295820 MtrunA17_Chr3g0131911 47.531 162 73 3 16 167 14 173 2.27e-41 145
Msa0295820 MtrunA17_Chr8g0385991 45.000 160 79 3 16 168 14 171 4.61e-41 144
Msa0295820 MtrunA17_Chr2g0321741 46.212 132 62 3 36 166 12 135 2.38e-36 135
Msa0295820 MtrunA17_Chr4g0050701 40.123 162 81 3 16 169 11 164 7.15e-36 129
Msa0295820 MtrunA17_Chr2g0321631 45.570 158 72 5 17 162 5 160 1.18e-35 130
Msa0295820 MtrunA17_Chr8g0345671 46.104 154 66 6 16 161 11 155 6.51e-35 132
Msa0295820 MtrunA17_Chr7g0266701 36.598 194 103 8 16 191 4 195 8.11e-35 128
Msa0295820 MtrunA17_Chr4g0026141 43.038 158 77 6 16 162 5 160 1.48e-33 125
Msa0295820 MtrunA17_Chr3g0113001 44.444 144 74 2 65 205 14 154 1.64e-33 125
Msa0295820 MtrunA17_Chr8g0345691 40.909 154 74 6 16 161 12 156 1.37e-29 117
Msa0295820 MtrunA17_Chr8g0345711 42.537 134 71 4 11 139 7 139 1.92e-28 108
Msa0295820 MtrunA17_Chr8g0345731 41.985 131 69 4 16 139 24 154 1.04e-26 104
Msa0295820 MtrunA17_Chr8g0384351 35.294 204 107 7 12 215 6 184 1.47e-25 101
Msa0295820 MtrunA17_Chr3g0113031 42.748 131 68 4 79 205 3 130 8.51e-25 101
Msa0295820 MtrunA17_Chr8g0345721 35.955 178 72 6 3 139 15 191 2.44e-24 99.0
Msa0295820 MtrunA17_Chr7g0243371 57.317 82 32 2 69 148 17 97 7.81e-23 92.4
Msa0295820 MtrunA17_Chr8g0345701 40.972 144 63 6 15 139 6 146 1.41e-22 93.2
Msa0295820 MtrunA17_Chr8g0345741 36.170 141 75 5 27 162 2 132 2.69e-22 92.0
Msa0295820 MtrunA17_Chr3g0130321 30.952 210 117 6 14 209 5 200 2.19e-21 90.9
Msa0295820 MtrunA17_Chr7g0251661 30.201 149 95 5 12 154 6 151 1.53e-18 81.6
Msa0295820 MtrunA17_Chr7g0251651 32.558 129 81 4 14 139 16 141 4.63e-14 70.1
Msa0295820 MtrunA17_Chr8g0389661 32.895 152 76 5 14 141 45 194 3.86e-12 67.4
Msa0295820 MtrunA17_Chr7g0274971 35.714 154 83 9 22 165 11 158 5.09e-12 64.7
Msa0295820 MtrunA17_Chr3g0113011 50.000 52 26 0 13 64 16 67 2.00e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295820 AT4G27410.2 78.636 220 46 1 3 222 1 219 5.22e-124 359
Msa0295820 AT1G52890.1 57.349 347 115 9 3 347 1 316 7.32e-123 357
Msa0295820 AT4G27410.3 72.996 237 46 2 3 222 1 236 1.76e-119 348
Msa0295820 AT3G15500.1 68.924 251 71 4 3 249 1 248 8.29e-118 344
Msa0295820 AT3G04070.2 62.694 193 57 5 8 187 4 194 1.27e-76 239
Msa0295820 AT1G01720.1 65.341 176 55 3 14 184 5 179 3.18e-76 237
Msa0295820 AT5G63790.1 59.162 191 69 3 12 197 46 232 2.26e-74 233
Msa0295820 AT5G63790.2 59.162 191 69 3 12 197 56 242 3.44e-74 233
Msa0295820 AT5G08790.1 64.072 167 54 2 12 173 3 168 3.61e-74 231
Msa0295820 AT1G61110.1 66.477 176 43 4 16 177 16 189 3.42e-73 230
Msa0295820 AT1G77450.1 65.432 162 52 2 12 170 6 166 6.13e-73 227
Msa0295820 AT3G04070.1 57.895 209 57 6 8 187 4 210 1.03e-72 230
Msa0295820 AT1G69490.1 62.963 162 56 1 12 169 5 166 4.02e-71 223
Msa0295820 AT3G15510.1 64.417 163 45 3 20 169 21 183 6.33e-70 223
Msa0295820 AT3G18400.1 43.388 242 128 3 16 250 5 244 1.03e-62 203
Msa0295820 AT1G52880.1 63.125 160 47 2 20 167 21 180 2.41e-61 199
Msa0295820 AT1G65910.1 48.990 198 96 3 11 204 1 197 4.71e-59 201
Msa0295820 AT5G07680.1 54.706 170 75 1 3 170 4 173 6.83e-59 194
Msa0295820 AT3G17730.1 46.114 193 92 3 11 200 1 184 2.47e-58 189
Msa0295820 AT5G61430.1 45.726 234 108 5 13 227 13 246 3.05e-58 192
Msa0295820 AT2G02450.1 52.874 174 79 2 18 190 53 224 1.09e-57 192
Msa0295820 AT2G02450.2 52.874 174 79 2 18 190 53 224 1.26e-57 193
Msa0295820 AT5G07680.2 49.485 194 96 1 14 205 1 194 1.98e-57 189
Msa0295820 AT2G24430.2 52.299 174 80 2 1 172 1 173 2.32e-57 189
Msa0295820 AT2G24430.1 52.299 174 80 2 1 172 1 173 2.32e-57 189
Msa0295820 AT3G03200.1 48.691 191 91 3 11 198 1 187 5.49e-57 193
Msa0295820 AT5G18270.2 49.505 202 95 4 14 212 19 216 1.51e-56 187
Msa0295820 AT5G17260.1 53.049 164 74 2 11 171 1 164 2.09e-56 191
Msa0295820 AT5G39610.1 49.749 199 84 4 13 197 17 213 6.11e-56 184
Msa0295820 AT1G26870.1 50.811 185 79 4 7 179 7 191 1.03e-55 188
Msa0295820 AT5G18270.1 48.515 202 97 4 14 212 19 216 1.39e-55 185
Msa0295820 AT5G39820.1 49.730 185 68 4 18 177 22 206 9.87e-55 183
Msa0295820 AT2G43000.1 54.194 155 70 1 18 171 20 174 1.25e-54 181
Msa0295820 AT3G04060.1 49.505 202 90 5 14 212 18 210 2.59e-54 182
Msa0295820 AT2G33480.1 57.143 154 63 1 14 167 13 163 6.00e-54 179
Msa0295820 AT4G10350.1 51.974 152 70 1 16 164 9 160 9.31e-54 181
Msa0295820 AT5G53950.1 56.051 157 65 2 16 168 17 173 4.28e-53 180
Msa0295820 AT2G18060.3 48.171 164 80 2 9 169 2 163 5.00e-53 179
Msa0295820 AT2G18060.1 48.171 164 80 2 9 169 2 163 5.00e-53 179
Msa0295820 AT2G33480.2 57.143 154 61 2 14 167 13 161 5.66e-53 176
Msa0295820 AT1G71930.2 42.640 197 103 3 9 197 2 196 7.59e-53 177
Msa0295820 AT1G71930.1 42.640 197 103 3 9 197 2 196 7.59e-53 177
Msa0295820 AT1G33280.1 52.632 152 66 2 16 164 8 156 1.59e-52 176
Msa0295820 AT1G79580.3 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0295820 AT1G79580.5 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0295820 AT1G79580.4 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0295820 AT1G79580.2 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0295820 AT1G79580.1 54.140 157 65 3 12 164 13 166 1.80e-52 178
Msa0295820 AT1G54330.1 52.866 157 69 2 11 165 1 154 3.11e-52 176
Msa0295820 AT5G46590.1 55.195 154 65 3 16 165 6 159 3.17e-52 175
Msa0295820 AT3G29035.1 53.750 160 72 1 13 170 21 180 5.17e-52 175
Msa0295820 AT5G13180.1 56.604 159 63 4 14 170 12 166 7.01e-52 173
Msa0295820 AT3G15170.1 53.896 154 67 2 16 165 20 173 2.81e-51 173
Msa0295820 AT4G17980.1 53.750 160 60 4 16 165 6 161 3.19e-51 172
Msa0295820 AT4G17980.2 52.121 165 65 4 11 165 1 161 6.01e-51 172
Msa0295820 AT1G32510.1 43.182 220 100 5 16 210 6 225 9.91e-51 171
Msa0295820 AT4G36160.1 51.634 153 69 2 15 164 9 159 1.07e-50 174
Msa0295820 AT4G36160.3 51.634 153 69 2 15 164 9 159 1.07e-50 174
Msa0295820 AT4G36160.2 51.634 153 69 2 15 164 13 163 1.15e-50 174
Msa0295820 AT1G56010.2 46.875 160 81 2 11 166 14 173 1.65e-50 172
Msa0295820 AT1G12260.2 50.641 156 72 2 16 168 7 160 1.88e-50 172
Msa0295820 AT3G12977.1 46.541 159 84 1 11 168 13 171 2.02e-50 170
Msa0295820 AT5G66300.1 50.000 156 74 2 15 167 11 165 2.07e-50 171
Msa0295820 AT1G12260.1 50.641 156 72 2 16 168 7 160 2.61e-50 173
Msa0295820 AT3G10480.2 51.948 154 72 1 15 166 26 179 3.59e-50 174
Msa0295820 AT1G76420.1 48.837 172 77 3 3 164 1 171 4.77e-50 171
Msa0295820 AT5G62380.2 51.974 152 68 2 16 164 7 156 6.43e-50 171
Msa0295820 AT5G62380.1 51.974 152 68 2 16 164 7 156 6.43e-50 171
Msa0295820 AT1G33060.2 48.466 163 82 1 11 171 19 181 1.22e-49 176
Msa0295820 AT1G33060.1 48.466 163 82 1 11 171 19 181 1.32e-49 176
Msa0295820 AT1G32770.1 45.604 182 85 3 12 179 12 193 1.91e-49 170
Msa0295820 AT5G46590.2 56.028 141 59 2 16 153 6 146 2.06e-49 167
Msa0295820 AT1G62700.1 50.641 156 72 2 16 168 7 160 2.26e-49 171
Msa0295820 AT1G62700.2 50.641 156 72 2 16 168 7 160 2.26e-49 171
Msa0295820 AT2G46770.1 41.038 212 106 3 12 204 12 223 7.87e-49 168
Msa0295820 AT3G10480.1 51.613 155 72 2 15 166 26 180 9.88e-49 170
Msa0295820 AT3G10500.1 50.000 158 77 1 15 170 8 165 1.20e-48 172
Msa0295820 AT4G35580.3 45.408 196 99 3 15 208 8 197 1.40e-48 172
Msa0295820 AT4G35580.2 45.408 196 99 3 15 208 8 197 1.52e-48 171
Msa0295820 AT4G35580.1 45.408 196 99 3 15 208 8 197 1.61e-48 171
Msa0295820 AT5G04410.1 50.000 158 77 1 15 170 8 165 4.37e-48 171
Msa0295820 AT5G24590.2 42.929 198 105 3 6 200 3 195 4.47e-48 169
Msa0295820 AT3G10490.1 50.323 155 74 2 15 166 26 180 7.17e-48 162
Msa0295820 AT3G10490.2 50.000 158 70 3 15 166 26 180 4.08e-47 166
Msa0295820 AT3G61910.1 43.478 184 88 3 12 179 7 190 1.44e-46 162
Msa0295820 AT2G17040.1 40.909 220 116 5 18 231 8 219 4.70e-46 159
Msa0295820 AT3G12910.1 41.176 238 106 8 6 214 15 247 4.06e-45 157
Msa0295820 AT3G49530.2 47.134 157 80 2 11 164 8 164 5.65e-45 159
Msa0295820 AT1G34180.3 45.161 155 83 1 18 170 18 172 7.52e-45 160
Msa0295820 AT3G49530.1 47.134 157 80 2 11 164 8 164 1.36e-44 160
Msa0295820 AT2G27300.1 38.009 221 110 5 11 212 9 221 3.19e-44 155
Msa0295820 AT1G34180.1 45.161 155 83 1 18 170 18 172 3.89e-44 160
Msa0295820 AT5G64060.1 44.586 157 85 1 11 165 1 157 4.82e-44 155
Msa0295820 AT1G34190.1 43.871 155 85 1 18 170 18 172 5.02e-44 160
Msa0295820 AT3G10480.3 43.085 188 71 3 15 166 26 213 5.94e-44 159
Msa0295820 AT5G22290.1 41.304 184 92 5 18 194 23 197 9.16e-44 154
Msa0295820 AT1G34180.4 42.515 167 82 1 18 170 18 184 1.61e-42 154
Msa0295820 AT4G28530.1 45.556 180 72 6 3 164 1 172 3.49e-42 150
Msa0295820 AT3G44290.2 43.396 159 78 3 18 171 16 167 3.90e-42 147
Msa0295820 AT1G34180.2 42.515 167 82 1 18 170 18 184 1.01e-41 154
Msa0295820 AT3G44290.1 43.396 159 78 3 18 171 16 167 2.49e-41 148
Msa0295820 AT1G32870.1 50.314 159 73 4 16 170 10 166 5.51e-41 151
Msa0295820 AT5G09330.5 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0295820 AT5G09330.2 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0295820 AT5G09330.4 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0295820 AT5G09330.3 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0295820 AT5G09330.1 42.675 157 88 1 11 165 1 157 5.62e-41 150
Msa0295820 AT1G32870.2 50.314 159 73 3 16 170 10 166 6.24e-41 150
Msa0295820 AT1G32870.3 50.314 159 73 3 16 170 46 202 1.08e-40 150
Msa0295820 AT5G61430.2 42.857 182 85 5 65 227 2 183 1.69e-35 130
Msa0295820 AT4G10350.2 55.208 96 43 0 69 164 18 113 1.15e-33 126
Msa0295820 AT1G56010.1 51.429 105 48 1 65 166 2 106 1.99e-33 125
Msa0295820 AT5G64530.1 39.306 173 77 4 14 170 1 161 2.84e-33 122
Msa0295820 AT2G33480.3 57.576 99 42 0 69 167 8 106 6.35e-33 122
Msa0295820 AT3G44350.2 40.625 160 84 5 19 169 8 165 8.01e-33 123
Msa0295820 AT3G12977.2 51.429 105 50 1 65 168 14 118 1.83e-32 121
Msa0295820 AT5G22380.1 37.245 196 111 8 19 203 8 202 5.64e-31 117
Msa0295820 AT5G04395.1 42.857 147 66 3 12 141 24 169 1.36e-30 115
Msa0295820 AT5G64530.2 44.697 132 59 3 14 143 1 120 3.45e-30 113
Msa0295820 AT3G44350.1 42.029 138 70 4 16 145 5 140 1.68e-29 111
Msa0295820 AT4G01550.1 37.714 175 90 7 19 184 7 171 1.09e-26 110
Msa0295820 AT3G04420.2 41.732 127 70 2 17 139 4 130 2.30e-26 107
Msa0295820 AT2G43000.2 50.526 95 46 1 78 171 2 96 3.87e-26 103
Msa0295820 AT4G28530.2 35.758 165 51 3 16 164 10 135 5.26e-26 106
Msa0295820 AT3G04420.1 41.732 127 70 2 17 139 4 130 6.03e-26 107
Msa0295820 AT4G01520.1 35.632 174 97 6 17 180 5 173 6.70e-25 103
Msa0295820 AT4G27410.1 62.069 87 32 1 136 222 1 86 1.92e-24 98.6
Msa0295820 AT4G01540.3 36.047 172 95 6 19 180 7 173 2.19e-24 103
Msa0295820 AT4G01540.4 36.047 172 95 6 19 180 7 173 2.62e-24 103
Msa0295820 AT4G01540.1 36.257 171 94 6 19 179 7 172 3.44e-24 103
Msa0295820 AT4G01540.2 36.257 171 94 6 19 179 7 172 3.63e-24 103
Msa0295820 AT1G02230.1 41.538 130 66 5 17 139 4 130 3.10e-23 99.8
Msa0295820 AT1G02250.1 35.503 169 95 5 14 175 1 162 3.34e-22 96.7
Msa0295820 AT1G02220.1 37.692 130 74 3 14 139 1 127 3.76e-21 94.0
Msa0295820 AT3G56530.1 36.601 153 92 4 13 162 49 199 1.54e-20 91.3
Msa0295820 AT3G10490.4 49.367 79 39 1 89 166 2 80 2.78e-20 91.3
Msa0295820 AT3G10490.3 49.367 79 39 1 89 166 2 80 2.78e-20 91.3
Msa0295820 AT2G18060.2 47.368 76 38 1 94 169 2 75 7.96e-19 85.9
Msa0295820 AT5G50820.1 37.226 137 70 5 14 144 15 141 4.08e-18 82.0
Msa0295820 AT3G55210.1 34.161 161 88 5 16 162 11 167 7.64e-18 83.2
Msa0295820 AT1G01010.1 34.146 164 85 8 19 168 6 160 2.41e-17 83.2
Msa0295820 AT5G22290.2 39.623 106 49 4 95 194 2 98 2.83e-17 80.9
Msa0295820 AT5G14000.1 31.646 158 97 4 14 167 13 163 2.40e-16 77.4
Msa0295820 AT5G14000.2 34.615 130 81 2 14 141 13 140 8.52e-16 74.3
Msa0295820 AT3G04430.1 35.606 132 71 5 22 140 6 136 4.27e-12 65.1
Msa0295820 AT4G28500.1 34.641 153 80 6 16 150 59 209 3.04e-11 63.9
Msa0295820 AT4G29230.1 31.210 157 81 5 10 141 42 196 4.98e-11 64.3

Find 114 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAATTGAGTTGAAGATTT+TGG 0.169436 2_3:-48582552 None:intergenic
AATTCTTTGATTGATGATAA+TGG 0.229689 2_3:+48582575 Msa0295820:exon
CTAAAGGCACCAAAACTAAT+TGG 0.246600 2_3:+48583082 Msa0295820:CDS
CCGGTTCAACCAGTTGGATT+TGG 0.262214 2_3:+48584319 Msa0295820:CDS
CCAGATCCAGCTACTCTATT+TGG 0.287866 2_3:-48582964 None:intergenic
TAAATAGGTGGGGATTCTTT+TGG 0.291446 2_3:+48584416 Msa0295820:three_prime_UTR
CTGCTTGAAACGACGCCATT+TGG 0.294519 2_3:-48583788 None:intergenic
ATGCATAATCCAATTAGTTT+TGG 0.307345 2_3:-48583091 None:intergenic
ATTCTTTGATTGATGATAAT+GGG 0.307918 2_3:+48582576 Msa0295820:exon
CTCAATTTCGGCTAGAGATA+TGG 0.309590 2_3:+48584481 Msa0295820:three_prime_UTR
GATTCATCTTCTCTTCTTGT+TGG 0.315390 2_3:-48583949 None:intergenic
TGCTGCAAATAACAATTTCA+TGG 0.318107 2_3:+48583985 Msa0295820:CDS
CTAATCCGGTTGACCCGTTT+GGG 0.322735 2_3:+48584287 Msa0295820:CDS
CATTGATGTGGTTAGCTAAA+AGG 0.330943 2_3:-48584738 None:intergenic
TTGCATTTGTTTGCAATGTT+AGG 0.337412 2_3:+48584689 Msa0295820:three_prime_UTR
CTATTTGGCCTAGTCCCATT+TGG 0.338304 2_3:-48582949 None:intergenic
TTTGGATACTTCCTATCTCT+TGG 0.340923 2_3:-48582931 None:intergenic
TGAAGGAACAATAGAATCAT+TGG 0.360300 2_3:+48584559 Msa0295820:three_prime_UTR
ATTGGACACTTCCGTTATTA+CGG 0.370558 2_3:+48584132 Msa0295820:CDS
ACTAATCCGGTTGACCCGTT+TGG 0.373818 2_3:+48584286 Msa0295820:CDS
GAAACGACGCCATTTGGAAT+AGG 0.376235 2_3:-48583782 None:intergenic
CCAAATCCAACTGGTTGAAC+CGG 0.379491 2_3:-48584319 None:intergenic
CCAAATAGAGTAGCTGGATC+TGG 0.382299 2_3:+48582964 Msa0295820:CDS
TTGTTTGCAATGTTAGGCTT+TGG 0.386740 2_3:+48584695 Msa0295820:three_prime_UTR
CTTTCTATCCGGTTCATTGT+TGG 0.389707 2_3:-48584345 None:intergenic
TGTCCCCACATTATGTCAAT+TGG 0.393100 2_3:+48584114 Msa0295820:CDS
TTGAATTGCAGCTAGATGAT+TGG 0.399386 2_3:+48583717 Msa0295820:intron
TGAATTGCAGCTAGATGATT+GGG 0.406156 2_3:+48583718 Msa0295820:intron
GAAGGAACAATAGAATCATT+GGG 0.409016 2_3:+48584560 Msa0295820:three_prime_UTR
ACAAATGAAGGTAGAAAAGT+TGG 0.415542 2_3:+48583021 Msa0295820:CDS
ATTTCTTTAGTCCAAGAGAT+AGG 0.426397 2_3:+48582920 Msa0295820:CDS
AATCAAGTTGAGAATTCGTC+TGG 0.427256 2_3:+48584217 Msa0295820:CDS
CTAAACCCAAACGGGTCAAC+CGG 0.428969 2_3:-48584292 None:intergenic
CAAATAACAATTTCATGGAT+TGG 0.437272 2_3:+48583990 Msa0295820:CDS
CCCGTTTGGGTTTAGATACC+CGG 0.440772 2_3:+48584300 Msa0295820:CDS
TTTCATTCTAACTTTCTATC+CGG 0.450808 2_3:-48584356 None:intergenic
GAGTAGCTGGATCTGGGTAT+TGG 0.458403 2_3:+48582971 Msa0295820:CDS
GCCTAACAAAATTAGAAAAG+TGG 0.463768 2_3:+48584438 Msa0295820:three_prime_UTR
AGAGATAGGAAGTATCCAAA+TGG 0.473419 2_3:+48582934 Msa0295820:CDS
TGTTGGAATCCAAATCCAAC+TGG 0.474499 2_3:-48584328 None:intergenic
TTTGGATTCCAACAATGAAC+CGG 0.476582 2_3:+48584337 Msa0295820:exon
TTCTCAATAAACGGTAGACA+TGG 0.477440 2_3:-48582426 None:intergenic
TATGTTGGTAAAGCTCCTAA+AGG 0.483857 2_3:+48583066 Msa0295820:CDS
ACTAGGCCAAATAGAGTAGC+TGG 0.487807 2_3:+48582958 Msa0295820:CDS
TGGGGACAGAAGGGACATAA+AGG 0.491862 2_3:-48584099 None:intergenic
AAGCAATGGTCGTCAATTTG+TGG 0.495194 2_3:-48583884 None:intergenic
AACAAGAAGCTCTTCATCAG+TGG 0.495470 2_3:-48582658 None:intergenic
TATAGCTAGGTTGTAGAAGA+AGG 0.495780 2_3:-48582525 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.496775 2_3:+48582742 Msa0295820:CDS
CCGGGTATCTAAACCCAAAC+GGG 0.497333 2_3:-48584300 None:intergenic
AATGTGCATGTGGTGTAAAT+AGG 0.498122 2_3:+48584401 Msa0295820:three_prime_UTR
ACATTCTATGAATCTATCCA+TGG 0.501104 2_3:+48584519 Msa0295820:three_prime_UTR
ACCGGGTATCTAAACCCAAA+CGG 0.506194 2_3:-48584301 None:intergenic
TTCACTACTTTATCTCCCCA+TGG 0.509914 2_3:-48584536 None:intergenic
GACAAGATTATAACAAATGA+AGG 0.510810 2_3:+48583009 Msa0295820:CDS
TATAATCTTGTCTGTTCCAG+TGG 0.510918 2_3:-48582998 None:intergenic
TGACATAATGTGGGGACAGA+AGG 0.514449 2_3:-48584109 None:intergenic
CAAATAGAGTAGCTGGATCT+GGG 0.514453 2_3:+48582965 Msa0295820:CDS
TATCTATGTCGTAAAGTAGC+TGG 0.519439 2_3:+48582684 Msa0295820:CDS
AGTGTCCAATTGACATAATG+TGG 0.525796 2_3:-48584119 None:intergenic
AACTTACTTGGAAGAACCCA+TGG 0.526899 2_3:-48582759 None:intergenic
CTCTGAACCTCCTCTTCAGT+CGG 0.531419 2_3:-48584181 None:intergenic
GGAAGTATCCAAATGGGACT+AGG 0.531933 2_3:+48582941 Msa0295820:CDS
GAGATAGGAAGTATCCAAAT+GGG 0.536430 2_3:+48582935 Msa0295820:CDS
TGCATGTGGTGTAAATAGGT+GGG 0.539156 2_3:+48584405 Msa0295820:three_prime_UTR
CAAATCCAACTGGTTGAACC+GGG 0.543634 2_3:-48584318 None:intergenic
CGTTGTTTCGTGAAGAGTCA+AGG 0.544493 2_3:-48583125 None:intergenic
AGGAATGGGATACACTAATC+CGG 0.545779 2_3:+48584273 Msa0295820:CDS
TCTGGGTATTGGAAAGCCAC+TGG 0.550772 2_3:+48582982 Msa0295820:CDS
CACGTGGCAGCTTGAAGCAA+TGG 0.554810 2_3:-48583898 None:intergenic
CATTCTATGAATCTATCCAT+GGG 0.556174 2_3:+48584520 Msa0295820:three_prime_UTR
CATATCTCTAGCCGAAATTG+AGG 0.556183 2_3:-48584480 None:intergenic
GCACAATTGAGTTTACCTCC+TGG 0.560444 2_3:+48582621 Msa0295820:CDS
CTCCTCTTCAGTCGGATGCA+CGG 0.564978 2_3:-48584173 None:intergenic
GGAGATAAAGTAGTGAATGA+AGG 0.566636 2_3:+48584542 Msa0295820:three_prime_UTR
TCTCAATAAACGGTAGACAT+GGG 0.567264 2_3:-48582425 None:intergenic
AGATACCCGGTTCAACCAGT+TGG 0.569684 2_3:+48584313 Msa0295820:CDS
ACAAGAAGCTCTTCATCAGT+GGG 0.569952 2_3:-48582657 None:intergenic
CTCAATAAACGGTAGACATG+GGG 0.578042 2_3:-48582424 None:intergenic
GACATAATGTGGGGACAGAA+GGG 0.579791 2_3:-48584108 None:intergenic
TTTCAAGACGGTCAAACTCA+AGG 0.582786 2_3:+48584049 Msa0295820:CDS
GGTAAACTCAATTGTGCAAG+AGG 0.592070 2_3:-48582615 None:intergenic
TTCAAGAACATCGTCGAGGT+GGG 0.595939 2_3:-48583855 None:intergenic
ATTCAAGAACATCGTCGAGG+TGG 0.599629 2_3:-48583856 None:intergenic
GTGCATGTGGTGTAAATAGG+TGG 0.600948 2_3:+48584404 Msa0295820:three_prime_UTR
CTGAAGAGGAGGTTCAGAGT+GGG 0.604256 2_3:+48584185 Msa0295820:CDS
TCTCTACAAATTCGACCCAT+GGG 0.608644 2_3:+48582743 Msa0295820:CDS
GTGTCCAATTGACATAATGT+GGG 0.609196 2_3:-48584118 None:intergenic
ACGTGTCAACTCGCTAAGAA+CGG 0.615896 2_3:+48583916 Msa0295820:CDS
GTGGGGTAAAATCGAAAACC+AGG 0.620046 2_3:-48582639 None:intergenic
CGTGCATCCGACTGAAGAGG+AGG 0.623916 2_3:+48584174 Msa0295820:CDS
AGCTAGGTTGTAGAAGAAGG+TGG 0.626028 2_3:-48582522 None:intergenic
ATCCGTGCATCCGACTGAAG+AGG 0.627654 2_3:+48584171 Msa0295820:CDS
TTCGGCTAGAGATATGGAGG+TGG 0.631945 2_3:+48584487 Msa0295820:three_prime_UTR
TGAAGAGGAGGTTCAGAGTG+GGG 0.638487 2_3:+48584186 Msa0295820:CDS
GCATGTGGTGTAAATAGGTG+GGG 0.645640 2_3:+48584406 Msa0295820:three_prime_UTR
CTTGACTCTTCACGAAACAA+CGG 0.657327 2_3:+48583126 Msa0295820:CDS
AGAACAAAAGGTGATTCATG+TGG 0.658395 2_3:-48584645 None:intergenic
GACTCTTCACGAAACAACGG+TGG 0.660789 2_3:+48583129 Msa0295820:CDS
GTTCTTAGCGAGTTGACACG+TGG 0.662417 2_3:-48583914 None:intergenic
GAATACACTCAATACAGCAA+CGG 0.669213 2_3:+48583812 Msa0295820:CDS
ACTGAAGAGGAGGTTCAGAG+TGG 0.669986 2_3:+48584184 Msa0295820:CDS
AAGGAACAATAGAATCATTG+GGG 0.673740 2_3:+48584561 Msa0295820:three_prime_UTR
AATTTCGGCTAGAGATATGG+AGG 0.677355 2_3:+48584484 Msa0295820:three_prime_UTR
ACAGTAACAGGGTTTCAAGA+CGG 0.683973 2_3:+48584037 Msa0295820:CDS
ACGAAACAACGGTGGCACCA+AGG 0.687136 2_3:+48583137 Msa0295820:CDS
TGTAATAGTCAATGTGCATG+TGG 0.690930 2_3:+48584391 Msa0295820:three_prime_UTR
ACTTACTTGGAAGAACCCAT+GGG 0.692202 2_3:-48582758 None:intergenic
TGTCCAATTGACATAATGTG+GGG 0.696814 2_3:-48584117 None:intergenic
ATGTGGCTAAAAGCATACGT+TGG 0.727053 2_3:-48584628 None:intergenic
ATTCTATGAATCTATCCATG+GGG 0.736638 2_3:+48584521 Msa0295820:three_prime_UTR
GTGATTCAAGAACATCGTCG+AGG 0.740584 2_3:-48583859 None:intergenic
GGGTAAAATCGAAAACCAGG+AGG 0.741080 2_3:-48582636 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.743838 2_3:-48582656 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTTTTCTCAATAAA+CGG - chr2_3:48582438-48582457 None:intergenic 15.0%
!! CTTTAATATGAATAAAACAT+AGG - chr2_3:48582847-48582866 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG + chr2_3:48583278-48583297 Msa0295820:intron 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG - chr2_3:48583543-48583562 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG - chr2_3:48583575-48583594 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG - chr2_3:48583602-48583621 None:intergenic 15.0%
!!! TTTTCTTTTTTCTCAATAAA+CGG - chr2_3:48582438-48582457 None:intergenic 15.0%
!! CTTTAATATGAATAAAACAT+AGG - chr2_3:48582847-48582866 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG + chr2_3:48583278-48583297 Msa0295820:intron 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG - chr2_3:48583543-48583562 None:intergenic 15.0%
!! GAATTGTGAAATAAATAATA+TGG - chr2_3:48583575-48583594 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG - chr2_3:48583602-48583621 None:intergenic 15.0%
!!! AATAATTGAGTTGAAGATTT+TGG - chr2_3:48582555-48582574 None:intergenic 20.0%
!!! AATTCTTTGATTGATGATAA+TGG + chr2_3:48582575-48582594 Msa0295820:exon 20.0%
!!! ATTCTTTGATTGATGATAAT+GGG + chr2_3:48582576-48582595 Msa0295820:exon 20.0%
!! AATGAATGTATATAATACCT+TGG - chr2_3:48583157-48583176 None:intergenic 20.0%
!! GTCAATATTTGATATTTCAA+AGG + chr2_3:48583403-48583422 Msa0295820:intron 20.0%
!!! GATTGAACAACAAAATTTTT+AGG - chr2_3:48583487-48583506 None:intergenic 20.0%
!! AAATAAATAATATGGTGACA+AGG - chr2_3:48583567-48583586 None:intergenic 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG - chr2_3:48583611-48583630 None:intergenic 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG + chr2_3:48583649-48583668 Msa0295820:intron 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG + chr2_3:48583650-48583669 Msa0295820:intron 20.0%
!! AATTATCCCATAAAACAATT+TGG - chr2_3:48583659-48583678 None:intergenic 20.0%
!!! AGTGGAAAAAAATTGAATTT+TGG + chr2_3:48584456-48584475 Msa0295820:three_prime_UTR 20.0%
!!! CATTTTTTAAGTAGAACAAA+AGG - chr2_3:48584660-48584679 None:intergenic 20.0%
!!! AATAATTGAGTTGAAGATTT+TGG - chr2_3:48582555-48582574 None:intergenic 20.0%
!!! AATTCTTTGATTGATGATAA+TGG + chr2_3:48582575-48582594 Msa0295820:exon 20.0%
!!! ATTCTTTGATTGATGATAAT+GGG + chr2_3:48582576-48582595 Msa0295820:exon 20.0%
!! AATGAATGTATATAATACCT+TGG - chr2_3:48583157-48583176 None:intergenic 20.0%
!! GTCAATATTTGATATTTCAA+AGG + chr2_3:48583403-48583422 Msa0295820:intron 20.0%
!!! GATTGAACAACAAAATTTTT+AGG - chr2_3:48583487-48583506 None:intergenic 20.0%
!! AAATAAATAATATGGTGACA+AGG - chr2_3:48583567-48583586 None:intergenic 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG - chr2_3:48583611-48583630 None:intergenic 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG + chr2_3:48583649-48583668 Msa0295820:intron 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG + chr2_3:48583650-48583669 Msa0295820:intron 20.0%
!! AATTATCCCATAAAACAATT+TGG - chr2_3:48583659-48583678 None:intergenic 20.0%
!!! AGTGGAAAAAAATTGAATTT+TGG + chr2_3:48584456-48584475 Msa0295820:three_prime_UTR 20.0%
!!! CATTTTTTAAGTAGAACAAA+AGG - chr2_3:48584660-48584679 None:intergenic 20.0%
! GACAAGATTATAACAAATGA+AGG + chr2_3:48583009-48583028 Msa0295820:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG + chr2_3:48583051-48583070 Msa0295820:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG - chr2_3:48583094-48583113 None:intergenic 25.0%
! TTAAAAAATTGGGTGATACA+TGG + chr2_3:48583352-48583371 Msa0295820:intron 25.0%
! CAATTTGGTAAAACAGTAAA+AGG - chr2_3:48583644-48583663 None:intergenic 25.0%
! CAAATAACAATTTCATGGAT+TGG + chr2_3:48583990-48584009 Msa0295820:CDS 25.0%
!! AAATGATTTTACTCAAGGAA+TGG + chr2_3:48584258-48584277 Msa0295820:CDS 25.0%
!! AATGATTTTACTCAAGGAAT+GGG + chr2_3:48584259-48584278 Msa0295820:CDS 25.0%
! TTTCATTCTAACTTTCTATC+CGG - chr2_3:48584359-48584378 None:intergenic 25.0%
!!! TCCACTTTTCTAATTTTGTT+AGG - chr2_3:48584442-48584461 None:intergenic 25.0%
!! GATTAGAATCATGTAGTTTT+TGG + chr2_3:48584600-48584619 Msa0295820:three_prime_UTR 25.0%
! GACAAGATTATAACAAATGA+AGG + chr2_3:48583009-48583028 Msa0295820:CDS 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG + chr2_3:48583051-48583070 Msa0295820:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG - chr2_3:48583094-48583113 None:intergenic 25.0%
! TTAAAAAATTGGGTGATACA+TGG + chr2_3:48583352-48583371 Msa0295820:intron 25.0%
! CAATTTGGTAAAACAGTAAA+AGG - chr2_3:48583644-48583663 None:intergenic 25.0%
! CAAATAACAATTTCATGGAT+TGG + chr2_3:48583990-48584009 Msa0295820:CDS 25.0%
!! AAATGATTTTACTCAAGGAA+TGG + chr2_3:48584258-48584277 Msa0295820:CDS 25.0%
!! AATGATTTTACTCAAGGAAT+GGG + chr2_3:48584259-48584278 Msa0295820:CDS 25.0%
! TTTCATTCTAACTTTCTATC+CGG - chr2_3:48584359-48584378 None:intergenic 25.0%
!!! TCCACTTTTCTAATTTTGTT+AGG - chr2_3:48584442-48584461 None:intergenic 25.0%
!! GATTAGAATCATGTAGTTTT+TGG + chr2_3:48584600-48584619 Msa0295820:three_prime_UTR 25.0%
!! AGATTTTGGTGATTATAGCT+AGG - chr2_3:48582541-48582560 None:intergenic 30.0%
CGTTGTGAAATTAACTTACT+TGG - chr2_3:48582774-48582793 None:intergenic 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG + chr2_3:48582868-48582887 Msa0295820:intron 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG + chr2_3:48582873-48582892 Msa0295820:intron 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG + chr2_3:48582896-48582915 Msa0295820:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG + chr2_3:48582920-48582939 Msa0295820:CDS 30.0%
ACAAATGAAGGTAGAAAAGT+TGG + chr2_3:48583021-48583040 Msa0295820:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG + chr2_3:48583297-48583316 Msa0295820:intron 30.0%
! AGAGTTTGATAATTGGCAAA+GGG - chr2_3:48583536-48583555 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG - chr2_3:48583537-48583556 None:intergenic 30.0%
TGCTGCAAATAACAATTTCA+TGG + chr2_3:48583985-48584004 Msa0295820:CDS 30.0%
! CAAGGAATGATGAATTTTAG+TGG + chr2_3:48584067-48584086 Msa0295820:CDS 30.0%
! GGTTCAAATGATTTTACTCA+AGG + chr2_3:48584253-48584272 Msa0295820:CDS 30.0%
GCCTAACAAAATTAGAAAAG+TGG + chr2_3:48584438-48584457 Msa0295820:three_prime_UTR 30.0%
!! TGAATTTTGGTCCTCAATTT+CGG + chr2_3:48584469-48584488 Msa0295820:three_prime_UTR 30.0%
ACATTCTATGAATCTATCCA+TGG + chr2_3:48584519-48584538 Msa0295820:three_prime_UTR 30.0%
CATTCTATGAATCTATCCAT+GGG + chr2_3:48584520-48584539 Msa0295820:three_prime_UTR 30.0%
ATTCTATGAATCTATCCATG+GGG + chr2_3:48584521-48584540 Msa0295820:three_prime_UTR 30.0%
TGAAGGAACAATAGAATCAT+TGG + chr2_3:48584559-48584578 Msa0295820:three_prime_UTR 30.0%
GAAGGAACAATAGAATCATT+GGG + chr2_3:48584560-48584579 Msa0295820:three_prime_UTR 30.0%
AAGGAACAATAGAATCATTG+GGG + chr2_3:48584561-48584580 Msa0295820:three_prime_UTR 30.0%
TTGCATTTGTTTGCAATGTT+AGG + chr2_3:48584689-48584708 Msa0295820:three_prime_UTR 30.0%
!!! ACTTTTATGTAGCATTGATG+TGG - chr2_3:48584753-48584772 None:intergenic 30.0%
!! AGATTTTGGTGATTATAGCT+AGG - chr2_3:48582541-48582560 None:intergenic 30.0%
CGTTGTGAAATTAACTTACT+TGG - chr2_3:48582774-48582793 None:intergenic 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG + chr2_3:48582868-48582887 Msa0295820:intron 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG + chr2_3:48582873-48582892 Msa0295820:intron 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG + chr2_3:48582896-48582915 Msa0295820:CDS 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG + chr2_3:48582920-48582939 Msa0295820:CDS 30.0%
ACAAATGAAGGTAGAAAAGT+TGG + chr2_3:48583021-48583040 Msa0295820:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG + chr2_3:48583297-48583316 Msa0295820:intron 30.0%
! AGAGTTTGATAATTGGCAAA+GGG - chr2_3:48583536-48583555 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG - chr2_3:48583537-48583556 None:intergenic 30.0%
TGCTGCAAATAACAATTTCA+TGG + chr2_3:48583985-48584004 Msa0295820:CDS 30.0%
! CAAGGAATGATGAATTTTAG+TGG + chr2_3:48584067-48584086 Msa0295820:CDS 30.0%
! GGTTCAAATGATTTTACTCA+AGG + chr2_3:48584253-48584272 Msa0295820:CDS 30.0%
GCCTAACAAAATTAGAAAAG+TGG + chr2_3:48584438-48584457 Msa0295820:three_prime_UTR 30.0%
!! TGAATTTTGGTCCTCAATTT+CGG + chr2_3:48584469-48584488 Msa0295820:three_prime_UTR 30.0%
ACATTCTATGAATCTATCCA+TGG + chr2_3:48584519-48584538 Msa0295820:three_prime_UTR 30.0%
CATTCTATGAATCTATCCAT+GGG + chr2_3:48584520-48584539 Msa0295820:three_prime_UTR 30.0%
ATTCTATGAATCTATCCATG+GGG + chr2_3:48584521-48584540 Msa0295820:three_prime_UTR 30.0%
TGAAGGAACAATAGAATCAT+TGG + chr2_3:48584559-48584578 Msa0295820:three_prime_UTR 30.0%
GAAGGAACAATAGAATCATT+GGG + chr2_3:48584560-48584579 Msa0295820:three_prime_UTR 30.0%
AAGGAACAATAGAATCATTG+GGG + chr2_3:48584561-48584580 Msa0295820:three_prime_UTR 30.0%
TTGCATTTGTTTGCAATGTT+AGG + chr2_3:48584689-48584708 Msa0295820:three_prime_UTR 30.0%
!!! ACTTTTATGTAGCATTGATG+TGG - chr2_3:48584753-48584772 None:intergenic 30.0%
TCTCAATAAACGGTAGACAT+GGG - chr2_3:48582428-48582447 None:intergenic 35.0%
TTCTCAATAAACGGTAGACA+TGG - chr2_3:48582429-48582448 None:intergenic 35.0%
TATAGCTAGGTTGTAGAAGA+AGG - chr2_3:48582528-48582547 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG + chr2_3:48582684-48582703 Msa0295820:CDS 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG + chr2_3:48582883-48582902 Msa0295820:intron 35.0%
TTTGGATACTTCCTATCTCT+TGG - chr2_3:48582934-48582953 None:intergenic 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG + chr2_3:48582934-48582953 Msa0295820:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG + chr2_3:48582935-48582954 Msa0295820:CDS 35.0%
TATAATCTTGTCTGTTCCAG+TGG - chr2_3:48583001-48583020 None:intergenic 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG + chr2_3:48583066-48583085 Msa0295820:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG - chr2_3:48583084-48583103 None:intergenic 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG + chr2_3:48583082-48583101 Msa0295820:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG + chr2_3:48583296-48583315 Msa0295820:intron 35.0%
CAGTAAAAGGTCAAAAACAG+AGG - chr2_3:48583631-48583650 None:intergenic 35.0%
TTGAATTGCAGCTAGATGAT+TGG + chr2_3:48583717-48583736 Msa0295820:intron 35.0%
TGAATTGCAGCTAGATGATT+GGG + chr2_3:48583718-48583737 Msa0295820:intron 35.0%
GCACAAAAACCTATTCCAAA+TGG + chr2_3:48583773-48583792 Msa0295820:CDS 35.0%
GAATACACTCAATACAGCAA+CGG + chr2_3:48583812-48583831 Msa0295820:CDS 35.0%
GATTCATCTTCTCTTCTTGT+TGG - chr2_3:48583952-48583971 None:intergenic 35.0%
! TCGATTTTGAACACAGTAAC+AGG + chr2_3:48584025-48584044 Msa0295820:CDS 35.0%
! CGATTTTGAACACAGTAACA+GGG + chr2_3:48584026-48584045 Msa0295820:CDS 35.0%
TGTCCAATTGACATAATGTG+GGG - chr2_3:48584120-48584139 None:intergenic 35.0%
GTGTCCAATTGACATAATGT+GGG - chr2_3:48584121-48584140 None:intergenic 35.0%
AGTGTCCAATTGACATAATG+TGG - chr2_3:48584122-48584141 None:intergenic 35.0%
ATTGGACACTTCCGTTATTA+CGG + chr2_3:48584132-48584151 Msa0295820:CDS 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG - chr2_3:48584146-48584165 None:intergenic 35.0%
!! AATCAAGTTGAGAATTCGTC+TGG + chr2_3:48584217-48584236 Msa0295820:CDS 35.0%
TTTGGATTCCAACAATGAAC+CGG + chr2_3:48584337-48584356 Msa0295820:exon 35.0%
TGTAATAGTCAATGTGCATG+TGG + chr2_3:48584391-48584410 Msa0295820:three_prime_UTR 35.0%
AATGTGCATGTGGTGTAAAT+AGG + chr2_3:48584401-48584420 Msa0295820:three_prime_UTR 35.0%
! TAAATAGGTGGGGATTCTTT+TGG + chr2_3:48584416-48584435 Msa0295820:three_prime_UTR 35.0%
GGAGATAAAGTAGTGAATGA+AGG + chr2_3:48584542-48584561 Msa0295820:three_prime_UTR 35.0%
AGAACAAAAGGTGATTCATG+TGG - chr2_3:48584648-48584667 None:intergenic 35.0%
TTGTTTGCAATGTTAGGCTT+TGG + chr2_3:48584695-48584714 Msa0295820:three_prime_UTR 35.0%
! CATTGATGTGGTTAGCTAAA+AGG - chr2_3:48584741-48584760 None:intergenic 35.0%
TCTCAATAAACGGTAGACAT+GGG - chr2_3:48582428-48582447 None:intergenic 35.0%
TTCTCAATAAACGGTAGACA+TGG - chr2_3:48582429-48582448 None:intergenic 35.0%
TATAGCTAGGTTGTAGAAGA+AGG - chr2_3:48582528-48582547 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG + chr2_3:48582684-48582703 Msa0295820:CDS 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG + chr2_3:48582883-48582902 Msa0295820:intron 35.0%
TTTGGATACTTCCTATCTCT+TGG - chr2_3:48582934-48582953 None:intergenic 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG + chr2_3:48582934-48582953 Msa0295820:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG + chr2_3:48582935-48582954 Msa0295820:CDS 35.0%
TATAATCTTGTCTGTTCCAG+TGG - chr2_3:48583001-48583020 None:intergenic 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG + chr2_3:48583066-48583085 Msa0295820:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG - chr2_3:48583084-48583103 None:intergenic 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG + chr2_3:48583082-48583101 Msa0295820:CDS 35.0%
CTAGGCTGATGATTTGAAAA+TGG + chr2_3:48583296-48583315 Msa0295820:intron 35.0%
CAGTAAAAGGTCAAAAACAG+AGG - chr2_3:48583631-48583650 None:intergenic 35.0%
TTGAATTGCAGCTAGATGAT+TGG + chr2_3:48583717-48583736 Msa0295820:intron 35.0%
TGAATTGCAGCTAGATGATT+GGG + chr2_3:48583718-48583737 Msa0295820:intron 35.0%
GCACAAAAACCTATTCCAAA+TGG + chr2_3:48583773-48583792 Msa0295820:CDS 35.0%
GAATACACTCAATACAGCAA+CGG + chr2_3:48583812-48583831 Msa0295820:CDS 35.0%
GATTCATCTTCTCTTCTTGT+TGG - chr2_3:48583952-48583971 None:intergenic 35.0%
! TCGATTTTGAACACAGTAAC+AGG + chr2_3:48584025-48584044 Msa0295820:CDS 35.0%
! CGATTTTGAACACAGTAACA+GGG + chr2_3:48584026-48584045 Msa0295820:CDS 35.0%
TGTCCAATTGACATAATGTG+GGG - chr2_3:48584120-48584139 None:intergenic 35.0%
GTGTCCAATTGACATAATGT+GGG - chr2_3:48584121-48584140 None:intergenic 35.0%
AGTGTCCAATTGACATAATG+TGG - chr2_3:48584122-48584141 None:intergenic 35.0%
ATTGGACACTTCCGTTATTA+CGG + chr2_3:48584132-48584151 Msa0295820:CDS 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG - chr2_3:48584146-48584165 None:intergenic 35.0%
!! AATCAAGTTGAGAATTCGTC+TGG + chr2_3:48584217-48584236 Msa0295820:CDS 35.0%
TTTGGATTCCAACAATGAAC+CGG + chr2_3:48584337-48584356 Msa0295820:exon 35.0%
TGTAATAGTCAATGTGCATG+TGG + chr2_3:48584391-48584410 Msa0295820:three_prime_UTR 35.0%
AATGTGCATGTGGTGTAAAT+AGG + chr2_3:48584401-48584420 Msa0295820:three_prime_UTR 35.0%
! TAAATAGGTGGGGATTCTTT+TGG + chr2_3:48584416-48584435 Msa0295820:three_prime_UTR 35.0%
GGAGATAAAGTAGTGAATGA+AGG + chr2_3:48584542-48584561 Msa0295820:three_prime_UTR 35.0%
AGAACAAAAGGTGATTCATG+TGG - chr2_3:48584648-48584667 None:intergenic 35.0%
TTGTTTGCAATGTTAGGCTT+TGG + chr2_3:48584695-48584714 Msa0295820:three_prime_UTR 35.0%
! CATTGATGTGGTTAGCTAAA+AGG - chr2_3:48584741-48584760 None:intergenic 35.0%
CTCAATAAACGGTAGACATG+GGG - chr2_3:48582427-48582446 None:intergenic 40.0%
GGTAAACTCAATTGTGCAAG+AGG - chr2_3:48582618-48582637 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG - chr2_3:48582660-48582679 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG - chr2_3:48582661-48582680 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG + chr2_3:48582742-48582761 Msa0295820:CDS 40.0%
TCTCTACAAATTCGACCCAT+GGG + chr2_3:48582743-48582762 Msa0295820:CDS 40.0%
ACTTACTTGGAAGAACCCAT+GGG - chr2_3:48582761-48582780 None:intergenic 40.0%
AACTTACTTGGAAGAACCCA+TGG - chr2_3:48582762-48582781 None:intergenic 40.0%
CAAATAGAGTAGCTGGATCT+GGG + chr2_3:48582965-48582984 Msa0295820:CDS 40.0%
CTTGACTCTTCACGAAACAA+CGG + chr2_3:48583126-48583145 Msa0295820:CDS 40.0%
AAGCAATGGTCGTCAATTTG+TGG - chr2_3:48583887-48583906 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG + chr2_3:48584037-48584056 Msa0295820:CDS 40.0%
TTTCAAGACGGTCAAACTCA+AGG + chr2_3:48584049-48584068 Msa0295820:CDS 40.0%
TGTCCCCACATTATGTCAAT+TGG + chr2_3:48584114-48584133 Msa0295820:CDS 40.0%
!!! TCGTCTGGATTTTTTCAACG+CGG + chr2_3:48584232-48584251 Msa0295820:CDS 40.0%
AGGAATGGGATACACTAATC+CGG + chr2_3:48584273-48584292 Msa0295820:CDS 40.0%
TGTTGGAATCCAAATCCAAC+TGG - chr2_3:48584331-48584350 None:intergenic 40.0%
CTTTCTATCCGGTTCATTGT+TGG - chr2_3:48584348-48584367 None:intergenic 40.0%
TGCATGTGGTGTAAATAGGT+GGG + chr2_3:48584405-48584424 Msa0295820:three_prime_UTR 40.0%
CATATCTCTAGCCGAAATTG+AGG - chr2_3:48584483-48584502 None:intergenic 40.0%
CTCAATTTCGGCTAGAGATA+TGG + chr2_3:48584481-48584500 Msa0295820:three_prime_UTR 40.0%
AATTTCGGCTAGAGATATGG+AGG + chr2_3:48584484-48584503 Msa0295820:three_prime_UTR 40.0%
TTCACTACTTTATCTCCCCA+TGG - chr2_3:48584539-48584558 None:intergenic 40.0%
! ATGTGGCTAAAAGCATACGT+TGG - chr2_3:48584631-48584650 None:intergenic 40.0%
CTCAATAAACGGTAGACATG+GGG - chr2_3:48582427-48582446 None:intergenic 40.0%
GGTAAACTCAATTGTGCAAG+AGG - chr2_3:48582618-48582637 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG - chr2_3:48582660-48582679 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG - chr2_3:48582661-48582680 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG + chr2_3:48582742-48582761 Msa0295820:CDS 40.0%
TCTCTACAAATTCGACCCAT+GGG + chr2_3:48582743-48582762 Msa0295820:CDS 40.0%
ACTTACTTGGAAGAACCCAT+GGG - chr2_3:48582761-48582780 None:intergenic 40.0%
AACTTACTTGGAAGAACCCA+TGG - chr2_3:48582762-48582781 None:intergenic 40.0%
CAAATAGAGTAGCTGGATCT+GGG + chr2_3:48582965-48582984 Msa0295820:CDS 40.0%
CTTGACTCTTCACGAAACAA+CGG + chr2_3:48583126-48583145 Msa0295820:CDS 40.0%
AAGCAATGGTCGTCAATTTG+TGG - chr2_3:48583887-48583906 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG + chr2_3:48584037-48584056 Msa0295820:CDS 40.0%
TTTCAAGACGGTCAAACTCA+AGG + chr2_3:48584049-48584068 Msa0295820:CDS 40.0%
TGTCCCCACATTATGTCAAT+TGG + chr2_3:48584114-48584133 Msa0295820:CDS 40.0%
!!! TCGTCTGGATTTTTTCAACG+CGG + chr2_3:48584232-48584251 Msa0295820:CDS 40.0%
AGGAATGGGATACACTAATC+CGG + chr2_3:48584273-48584292 Msa0295820:CDS 40.0%
TGTTGGAATCCAAATCCAAC+TGG - chr2_3:48584331-48584350 None:intergenic 40.0%
CTTTCTATCCGGTTCATTGT+TGG - chr2_3:48584348-48584367 None:intergenic 40.0%
TGCATGTGGTGTAAATAGGT+GGG + chr2_3:48584405-48584424 Msa0295820:three_prime_UTR 40.0%
CATATCTCTAGCCGAAATTG+AGG - chr2_3:48584483-48584502 None:intergenic 40.0%
CTCAATTTCGGCTAGAGATA+TGG + chr2_3:48584481-48584500 Msa0295820:three_prime_UTR 40.0%
AATTTCGGCTAGAGATATGG+AGG + chr2_3:48584484-48584503 Msa0295820:three_prime_UTR 40.0%
TTCACTACTTTATCTCCCCA+TGG - chr2_3:48584539-48584558 None:intergenic 40.0%
! ATGTGGCTAAAAGCATACGT+TGG - chr2_3:48584631-48584650 None:intergenic 40.0%
AGCTAGGTTGTAGAAGAAGG+TGG - chr2_3:48582525-48582544 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG + chr2_3:48582621-48582640 Msa0295820:CDS 45.0%
GGGTAAAATCGAAAACCAGG+AGG - chr2_3:48582639-48582658 None:intergenic 45.0%
GTGGGGTAAAATCGAAAACC+AGG - chr2_3:48582642-48582661 None:intergenic 45.0%
CAAGAAGCTCTTCATCAGTG+GGG - chr2_3:48582659-48582678 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG + chr2_3:48582941-48582960 Msa0295820:CDS 45.0%
CTATTTGGCCTAGTCCCATT+TGG - chr2_3:48582952-48582971 None:intergenic 45.0%
ACTAGGCCAAATAGAGTAGC+TGG + chr2_3:48582958-48582977 Msa0295820:CDS 45.0%
CCAGATCCAGCTACTCTATT+TGG - chr2_3:48582967-48582986 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG + chr2_3:48582964-48582983 Msa0295820:CDS 45.0%
! CGTTGTTTCGTGAAGAGTCA+AGG - chr2_3:48583128-48583147 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG - chr2_3:48583785-48583804 None:intergenic 45.0%
TTCAAGAACATCGTCGAGGT+GGG - chr2_3:48583858-48583877 None:intergenic 45.0%
ATTCAAGAACATCGTCGAGG+TGG - chr2_3:48583859-48583878 None:intergenic 45.0%
GTGATTCAAGAACATCGTCG+AGG - chr2_3:48583862-48583881 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG + chr2_3:48583916-48583935 Msa0295820:CDS 45.0%
GACATAATGTGGGGACAGAA+GGG - chr2_3:48584111-48584130 None:intergenic 45.0%
TGACATAATGTGGGGACAGA+AGG - chr2_3:48584112-48584131 None:intergenic 45.0%
ACCGGGTATCTAAACCCAAA+CGG - chr2_3:48584304-48584323 None:intergenic 45.0%
CAAATCCAACTGGTTGAACC+GGG - chr2_3:48584321-48584340 None:intergenic 45.0%
CCAAATCCAACTGGTTGAAC+CGG - chr2_3:48584322-48584341 None:intergenic 45.0%
GTGCATGTGGTGTAAATAGG+TGG + chr2_3:48584404-48584423 Msa0295820:three_prime_UTR 45.0%
GCATGTGGTGTAAATAGGTG+GGG + chr2_3:48584406-48584425 Msa0295820:three_prime_UTR 45.0%
AGCTAGGTTGTAGAAGAAGG+TGG - chr2_3:48582525-48582544 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG + chr2_3:48582621-48582640 Msa0295820:CDS 45.0%
GGGTAAAATCGAAAACCAGG+AGG - chr2_3:48582639-48582658 None:intergenic 45.0%
GTGGGGTAAAATCGAAAACC+AGG - chr2_3:48582642-48582661 None:intergenic 45.0%
CAAGAAGCTCTTCATCAGTG+GGG - chr2_3:48582659-48582678 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG + chr2_3:48582941-48582960 Msa0295820:CDS 45.0%
CTATTTGGCCTAGTCCCATT+TGG - chr2_3:48582952-48582971 None:intergenic 45.0%
ACTAGGCCAAATAGAGTAGC+TGG + chr2_3:48582958-48582977 Msa0295820:CDS 45.0%
CCAGATCCAGCTACTCTATT+TGG - chr2_3:48582967-48582986 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG + chr2_3:48582964-48582983 Msa0295820:CDS 45.0%
! CGTTGTTTCGTGAAGAGTCA+AGG - chr2_3:48583128-48583147 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG - chr2_3:48583785-48583804 None:intergenic 45.0%
TTCAAGAACATCGTCGAGGT+GGG - chr2_3:48583858-48583877 None:intergenic 45.0%
ATTCAAGAACATCGTCGAGG+TGG - chr2_3:48583859-48583878 None:intergenic 45.0%
GTGATTCAAGAACATCGTCG+AGG - chr2_3:48583862-48583881 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG + chr2_3:48583916-48583935 Msa0295820:CDS 45.0%
GACATAATGTGGGGACAGAA+GGG - chr2_3:48584111-48584130 None:intergenic 45.0%
TGACATAATGTGGGGACAGA+AGG - chr2_3:48584112-48584131 None:intergenic 45.0%
ACCGGGTATCTAAACCCAAA+CGG - chr2_3:48584304-48584323 None:intergenic 45.0%
CAAATCCAACTGGTTGAACC+GGG - chr2_3:48584321-48584340 None:intergenic 45.0%
CCAAATCCAACTGGTTGAAC+CGG - chr2_3:48584322-48584341 None:intergenic 45.0%
GTGCATGTGGTGTAAATAGG+TGG + chr2_3:48584404-48584423 Msa0295820:three_prime_UTR 45.0%
GCATGTGGTGTAAATAGGTG+GGG + chr2_3:48584406-48584425 Msa0295820:three_prime_UTR 45.0%
!!! AACAAATTTTTTTAAAAAAT+TGG + chr2_3:48583341-48583360 Msa0295820:intron 5.0%
!!! ACAAATTTTTTTAAAAAATT+GGG + chr2_3:48583342-48583361 Msa0295820:intron 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG - chr2_3:48583450-48583469 None:intergenic 5.0%
!!! AACAAATTTTTTTAAAAAAT+TGG + chr2_3:48583341-48583360 Msa0295820:intron 5.0%
!!! ACAAATTTTTTTAAAAAATT+GGG + chr2_3:48583342-48583361 Msa0295820:intron 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG - chr2_3:48583450-48583469 None:intergenic 5.0%
GAGTAGCTGGATCTGGGTAT+TGG + chr2_3:48582971-48582990 Msa0295820:CDS 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG + chr2_3:48582982-48583001 Msa0295820:CDS 50.0%
GACTCTTCACGAAACAACGG+TGG + chr2_3:48583129-48583148 Msa0295820:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG - chr2_3:48583791-48583810 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG - chr2_3:48583917-48583936 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG - chr2_3:48584102-48584121 None:intergenic 50.0%
CTCTGAACCTCCTCTTCAGT+CGG - chr2_3:48584184-48584203 None:intergenic 50.0%
ACTGAAGAGGAGGTTCAGAG+TGG + chr2_3:48584184-48584203 Msa0295820:CDS 50.0%
CTGAAGAGGAGGTTCAGAGT+GGG + chr2_3:48584185-48584204 Msa0295820:CDS 50.0%
TGAAGAGGAGGTTCAGAGTG+GGG + chr2_3:48584186-48584205 Msa0295820:CDS 50.0%
ACTAATCCGGTTGACCCGTT+TGG + chr2_3:48584286-48584305 Msa0295820:CDS 50.0%
CTAATCCGGTTGACCCGTTT+GGG + chr2_3:48584287-48584306 Msa0295820:CDS 50.0%
CTAAACCCAAACGGGTCAAC+CGG - chr2_3:48584295-48584314 None:intergenic 50.0%
CCGGGTATCTAAACCCAAAC+GGG - chr2_3:48584303-48584322 None:intergenic 50.0%
! CCCGTTTGGGTTTAGATACC+CGG + chr2_3:48584300-48584319 Msa0295820:CDS 50.0%
AGATACCCGGTTCAACCAGT+TGG + chr2_3:48584313-48584332 Msa0295820:CDS 50.0%
CCGGTTCAACCAGTTGGATT+TGG + chr2_3:48584319-48584338 Msa0295820:CDS 50.0%
TTCGGCTAGAGATATGGAGG+TGG + chr2_3:48584487-48584506 Msa0295820:three_prime_UTR 50.0%
GAGTAGCTGGATCTGGGTAT+TGG + chr2_3:48582971-48582990 Msa0295820:CDS 50.0%
!! TCTGGGTATTGGAAAGCCAC+TGG + chr2_3:48582982-48583001 Msa0295820:CDS 50.0%
GACTCTTCACGAAACAACGG+TGG + chr2_3:48583129-48583148 Msa0295820:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG - chr2_3:48583791-48583810 None:intergenic 50.0%
! GTTCTTAGCGAGTTGACACG+TGG - chr2_3:48583917-48583936 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG - chr2_3:48584102-48584121 None:intergenic 50.0%
CTCTGAACCTCCTCTTCAGT+CGG - chr2_3:48584184-48584203 None:intergenic 50.0%
ACTGAAGAGGAGGTTCAGAG+TGG + chr2_3:48584184-48584203 Msa0295820:CDS 50.0%
CTGAAGAGGAGGTTCAGAGT+GGG + chr2_3:48584185-48584204 Msa0295820:CDS 50.0%
TGAAGAGGAGGTTCAGAGTG+GGG + chr2_3:48584186-48584205 Msa0295820:CDS 50.0%
ACTAATCCGGTTGACCCGTT+TGG + chr2_3:48584286-48584305 Msa0295820:CDS 50.0%
CTAATCCGGTTGACCCGTTT+GGG + chr2_3:48584287-48584306 Msa0295820:CDS 50.0%
CTAAACCCAAACGGGTCAAC+CGG - chr2_3:48584295-48584314 None:intergenic 50.0%
CCGGGTATCTAAACCCAAAC+GGG - chr2_3:48584303-48584322 None:intergenic 50.0%
! CCCGTTTGGGTTTAGATACC+CGG + chr2_3:48584300-48584319 Msa0295820:CDS 50.0%
AGATACCCGGTTCAACCAGT+TGG + chr2_3:48584313-48584332 Msa0295820:CDS 50.0%
CCGGTTCAACCAGTTGGATT+TGG + chr2_3:48584319-48584338 Msa0295820:CDS 50.0%
TTCGGCTAGAGATATGGAGG+TGG + chr2_3:48584487-48584506 Msa0295820:three_prime_UTR 50.0%
ACGAAACAACGGTGGCACCA+AGG + chr2_3:48583137-48583156 Msa0295820:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG - chr2_3:48583901-48583920 None:intergenic 55.0%
ATCCGTGCATCCGACTGAAG+AGG + chr2_3:48584171-48584190 Msa0295820:CDS 55.0%
CTCCTCTTCAGTCGGATGCA+CGG - chr2_3:48584176-48584195 None:intergenic 55.0%
ACGAAACAACGGTGGCACCA+AGG + chr2_3:48583137-48583156 Msa0295820:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG - chr2_3:48583901-48583920 None:intergenic 55.0%
ATCCGTGCATCCGACTGAAG+AGG + chr2_3:48584171-48584190 Msa0295820:CDS 55.0%
CTCCTCTTCAGTCGGATGCA+CGG - chr2_3:48584176-48584195 None:intergenic 55.0%
CGTGCATCCGACTGAAGAGG+AGG + chr2_3:48584174-48584193 Msa0295820:CDS 60.0%
CGTGCATCCGACTGAAGAGG+AGG + chr2_3:48584174-48584193 Msa0295820:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 48582411 48584809 48582411 ID=Msa0295820;Name=Msa0295820
chr2_3 mRNA 48582411 48584809 48582411 ID=Msa0295820-mRNA-1;Parent=Msa0295820;Name=Msa0295820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=177|1|1|1|1|1|3|455|360
chr2_3 exon 48582411 48582774 48582411 ID=Msa0295820-mRNA-1:exon:15239;Parent=Msa0295820-mRNA-1
chr2_3 exon 48582890 48583158 48582890 ID=Msa0295820-mRNA-1:exon:15240;Parent=Msa0295820-mRNA-1
chr2_3 exon 48583728 48584809 48583728 ID=Msa0295820-mRNA-1:exon:15241;Parent=Msa0295820-mRNA-1
chr2_3 five_prime_UTR 48582411 48582587 48582411 ID=Msa0295820-mRNA-1:five_prime_utr;Parent=Msa0295820-mRNA-1
chr2_3 CDS 48582588 48582774 48582588 ID=Msa0295820-mRNA-1:cds;Parent=Msa0295820-mRNA-1
chr2_3 CDS 48582890 48583158 48582890 ID=Msa0295820-mRNA-1:cds;Parent=Msa0295820-mRNA-1
chr2_3 CDS 48583728 48584354 48583728 ID=Msa0295820-mRNA-1:cds;Parent=Msa0295820-mRNA-1
chr2_3 three_prime_UTR 48584355 48584809 48584355 ID=Msa0295820-mRNA-1:three_prime_utr;Parent=Msa0295820-mRNA-1
Gene Sequence

>Msa0295820

ATGATAATGGGAATTCAAGACAAAGATCCTCTTGCACAATTGAGTTTACCTCCTGGTTTTCGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTCGACCCATGGGTTCTTCCAAGTAAGGCAATTTTTGGTGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACTAGGCCAAATAGAGTAGCTGGATCTGGGTATTGGAAAGCCACTGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATCAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGACTCCTTGACTCTTCACGAAACAACGGTGGCACCAAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAACTCAAGCGCACAAAAACCTATTCCAAATGGCGTCGTTTCAAGCAGAGAATACACTCAATACAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGATGTTCTTGAATCACTTCCACAAATTGACGACCATTGCTTCAAGCTGCCACGTGTCAACTCGCTAAGAACGGCGCAACATCACCAACAAGAAGAGAAGATGAATCTTCAAAATTTAAATGCTGCAAATAACAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGACGGTCAAACTCAAGGAATGATGAATTTTAGTGGTTGCAATGACCTTTATGTCCCTTCTGTCCCCACATTATGTCAATTGGACACTTCCGTTATTACGGAGAAAACTAGCAACATATCCGTGCATCCGACTGAAGAGGAGGTTCAGAGTGGGGCGAGAGCAAATCAAGTTGAGAATTCGTCTGGATTTTTTCAACGCGGTTCAAATGATTTTACTCAAGGAATGGGATACACTAATCCGGTTGACCCGTTTGGGTTTAGATACCCGGTTCAACCAGTTGGATTTGGATTCCAACAATGA
Protein sequence

>Msa0295820

MIMGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVVSSREYTQYSNGSSSSSSSHLDDVLESLPQIDDHCFKLPRVNSLRTAQHHQQEEKMNLQNLNAANNNFMDWSNSSSILNTVTGFQDGQTQGMMNFSGCNDLYVPSVPTLCQLDTSVITEKTSNISVHPTEEEVQSGARANQVENSSGFFQRGSNDFTQGMGYTNPVDPFGFRYPVQPVGFGFQQ*