AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1232700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1232700 MtrunA17_Chr8g0341861 98.286 175 3 0 1 175 1 175 5.07e-122 353
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 165 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCAACTGTTCCCCTTTC+AGG 0.122294 8_2:-9273440 None:intergenic
CAACTGTTTATTATATTTAA+TGG 0.131610 8_2:+9277269 Msa1232700:three_prime_UTR
AAGAAACAGAATTTGAAATT+TGG 0.144508 8_2:+9276427 Msa1232700:three_prime_UTR
ATATATAAATATACAATAAT+AGG 0.165485 8_2:-9277349 None:intergenic
ATTTGGCCTATTCACTATTA+TGG 0.187662 8_2:+9279124 Msa1232700:three_prime_UTR
GATTATTCAGTTACAGATTT+TGG 0.191219 8_2:+9279962 Msa1232700:three_prime_UTR
TCAGAGAGTTGTAGCTTTAA+AGG 0.193111 8_2:+9273062 Msa1232700:CDS
TAACAAAAGATTCAGATTAA+AGG 0.199333 8_2:+9276610 Msa1232700:three_prime_UTR
TGGTGATGGAAGGGTGATTT+TGG 0.207922 8_2:+9273181 Msa1232700:CDS
ACTTTGGATATGAAATTATT+TGG 0.222214 8_2:-9279422 None:intergenic
TTGACAACTTTGAAGGGTTT+TGG 0.234488 8_2:-9277018 None:intergenic
CTCCTCAAGAATAACATATT+TGG 0.237086 8_2:-9279359 None:intergenic
AGAAACAGAATTTGAAATTT+GGG 0.241265 8_2:+9276428 Msa1232700:three_prime_UTR
TCGTGTAAGATCTGCATTAT+TGG 0.248291 8_2:+9276812 Msa1232700:three_prime_UTR
ATGCTTGCTGCTGTTATGTC+TGG 0.276795 8_2:+9276465 Msa1232700:three_prime_UTR
ATTATTGTTGGGAGCGTATC+TGG 0.277369 8_2:+9276551 Msa1232700:three_prime_UTR
AGTACTATATATCTATATTT+AGG 0.287574 8_2:-9276870 None:intergenic
AGTTTCTTGCTGATGTTCTT+TGG 0.296937 8_2:+9278648 Msa1232700:three_prime_UTR
TTTACTTGGTTGAAAGGATT+TGG 0.305186 8_2:+9279107 Msa1232700:three_prime_UTR
GGTGGTGACTCGTATGATTC+GGG 0.312778 8_2:+9273458 Msa1232700:CDS
TTTCTCTTGCATTAGATCCT+TGG 0.319284 8_2:+9278574 Msa1232700:three_prime_UTR
ATGAGTACTTTGATAGTTCA+TGG 0.322932 8_2:+9278613 Msa1232700:three_prime_UTR
TTCTCTTGCATTAGATCCTT+GGG 0.329763 8_2:+9278575 Msa1232700:three_prime_UTR
ATATATCTATATTTAGGAAT+TGG 0.331421 8_2:-9276864 None:intergenic
TTTCAGAAGGGGAGGAAGAT+AGG 0.332254 8_2:-9276730 None:intergenic
TGGACGATGATTCTGTTTAT+AGG 0.334225 8_2:+9273369 Msa1232700:CDS
TATATGTTGTAGATCATAAT+AGG 0.345789 8_2:+9280006 Msa1232700:three_prime_UTR
GCGGTTGCCACAGCCATTAC+TGG 0.348920 8_2:-9278546 None:intergenic
GAGCATTGGCGTTGATGATA+TGG 0.349849 8_2:-9279916 None:intergenic
TTTCTTACCAATACAGTGAT+TGG 0.360244 8_2:+9280119 Msa1232700:three_prime_UTR
GAGGAAGAATTGAGCGGAGG+AGG 0.363180 8_2:-9276657 None:intergenic
GGTAAAAGTGGAGAACAATT+TGG 0.367119 8_2:+9277204 Msa1232700:three_prime_UTR
CAATCATGTTTCTCATTTGT+CGG 0.367185 8_2:-9276973 None:intergenic
CAGAGAGTTGTAGCTTTAAA+GGG 0.368349 8_2:+9273063 Msa1232700:CDS
TGAAATTATTTGGTCCATAT+AGG 0.374264 8_2:-9279412 None:intergenic
TGTCACCTGCATGAAGCTTC+TGG 0.376676 8_2:-9279303 None:intergenic
ACAGTTGTCCCGACTGCTCT+TGG 0.379237 8_2:+9274605 Msa1232700:three_prime_UTR
GGGGAGGAAGATAGGGTTGA+TGG 0.381322 8_2:-9276722 None:intergenic
TTCAGAAGGGGAGGAAGATA+GGG 0.386770 8_2:-9276729 None:intergenic
TGGTGGTGACTCGTATGATT+CGG 0.389772 8_2:+9273457 Msa1232700:CDS
ACTAGGCTACCTGTGAAGTA+TGG 0.393809 8_2:-9276840 None:intergenic
AAAGTTAATTGATACCAATA+TGG 0.397508 8_2:-9278912 None:intergenic
GAAGTTCAGGATCCGGTATT+CGG 0.399782 8_2:+9273111 Msa1232700:CDS
AGGAGGTAAAAGAGGGTAAG+AGG 0.400064 8_2:-9276676 None:intergenic
TTTGAGAATGTAAGGGGAGG+GGG 0.400516 8_2:-9280254 None:intergenic
GGATACAATACAAGTTTGTT+TGG 0.401116 8_2:-9280226 None:intergenic
TATATAAATATACAATAATA+GGG 0.403995 8_2:-9277348 None:intergenic
GTGGCATCTGAAAACCTATA+TGG 0.411109 8_2:+9279398 Msa1232700:three_prime_UTR
CACAATAGCAGGGGTTGTTA+AGG 0.412687 8_2:+9278880 Msa1232700:three_prime_UTR
ACAAGTTTGTTTGGTGTTGA+AGG 0.413238 8_2:-9280217 None:intergenic
GCAAACAAGAGGAGAAAGAT+TGG 0.417679 8_2:-9274861 None:intergenic
GGCCTATTCACTATTATGGT+TGG 0.420950 8_2:+9279128 Msa1232700:three_prime_UTR
TCACATTCACTTCTATGCTT+CGG 0.422056 8_2:-9277178 None:intergenic
TGCTTGCTGCTGTTATGTCT+GGG 0.429245 8_2:+9276466 Msa1232700:three_prime_UTR
CTCTGTCACATTTGCTACAA+TGG 0.434598 8_2:+9274673 Msa1232700:three_prime_UTR
TCTGTTTATAGGAGAGGTAA+TGG 0.441718 8_2:+9273380 Msa1232700:CDS
TTCTTGCTGATGTTCTTTGG+TGG 0.442105 8_2:+9278651 Msa1232700:three_prime_UTR
CTGTTATGTCTGGGTTTCGC+TGG 0.446264 8_2:+9276475 Msa1232700:three_prime_UTR
TAAGGAGGCCGTCACCATAT+TGG 0.448702 8_2:+9278898 Msa1232700:three_prime_UTR
ACCAATACAGTGATTGGTAA+TGG 0.453845 8_2:+9280125 Msa1232700:three_prime_UTR
ACTTTCATGATGCGTTTACT+TGG 0.454790 8_2:+9279093 Msa1232700:three_prime_UTR
CGAAAGCTCTCTCCGAATAC+CGG 0.456403 8_2:-9273123 None:intergenic
GCCGTCACAGTCACAATAGC+AGG 0.457610 8_2:+9278869 Msa1232700:three_prime_UTR
TTTGTGTGTGTATGTGTAGA+TGG 0.461936 8_2:-9277378 None:intergenic
GCACAACACAGTGTGCAGTT+TGG 0.466555 8_2:-9276787 None:intergenic
AAAATTACACTGTAAATGTA+AGG 0.471890 8_2:-9277080 None:intergenic
GATGCGTTTACTTGGTTGAA+AGG 0.473291 8_2:+9279101 Msa1232700:three_prime_UTR
ATTCCTGATAGTTTAAAACT+TGG 0.475966 8_2:-9275514 None:intergenic
GATAGTGGAAGTTCAGGATC+CGG 0.479106 8_2:+9273104 Msa1232700:CDS
CACCAACCATAATAGTGAAT+AGG 0.480731 8_2:-9279130 None:intergenic
TGAATGTGAAAAGGTAAAAG+TGG 0.482408 8_2:+9277192 Msa1232700:three_prime_UTR
TATATTTAGGAATTGGAACT+AGG 0.484248 8_2:-9276857 None:intergenic
AATGCATCTAAAATATTAAG+TGG 0.484373 8_2:-9280091 None:intergenic
ATGTAGGAAGGAGGTAAAAG+AGG 0.486189 8_2:-9276684 None:intergenic
GGTCAATTTCGTTGTTACAT+TGG 0.486992 8_2:+9280187 Msa1232700:three_prime_UTR
TATTGAAGACAGTCCTGAAA+GGG 0.489450 8_2:+9273427 Msa1232700:CDS
ACCATTACCAATCACTGTAT+TGG 0.491682 8_2:-9280126 None:intergenic
AGTCAAGAGATGATGTAGGA+AGG 0.500937 8_2:-9276696 None:intergenic
ACCGTGTTTGACAACTTTGA+AGG 0.502314 8_2:-9277025 None:intergenic
GAAACAGAATTTGAAATTTG+GGG 0.502876 8_2:+9276429 Msa1232700:three_prime_UTR
AATGTTCAGTTAGCGATAGC+AGG 0.503802 8_2:-9277423 None:intergenic
GATGAGTCAAGAGATGATGT+AGG 0.503818 8_2:-9276700 None:intergenic
AGATCATCATACAAAAGATT+CGG 0.504216 8_2:+9279333 Msa1232700:three_prime_UTR
GAAAGGATCGTGCCGATGAA+TGG 0.505519 8_2:+9273335 Msa1232700:CDS
ACTTCTATGCTTCGGCCTCA+AGG 0.506147 8_2:-9277170 None:intergenic
CCTGAAAGGGGAACAGTTGG+TGG 0.506734 8_2:+9273440 Msa1232700:CDS
ATATGTTATTCTTGAGGAGA+TGG 0.508928 8_2:+9279363 Msa1232700:three_prime_UTR
TTGATAAGTTTCGGAAGGAA+AGG 0.517003 8_2:+9273318 Msa1232700:CDS
GTCTTCAAGATATTTGCTAC+AGG 0.517741 8_2:-9273524 None:intergenic
ACATAGCTCATCAAGGTAAG+TGG 0.518542 8_2:-9278519 None:intergenic
GGACTGTCTTCAATATCAAA+AGG 0.520338 8_2:-9273419 None:intergenic
TTCGGCCTCAAGGTTGTAGC+CGG 0.523367 8_2:-9277160 None:intergenic
CCGTGTTTGACAACTTTGAA+GGG 0.525410 8_2:-9277024 None:intergenic
GCATAGAAGTGAATGTGAAA+AGG 0.526950 8_2:+9277183 Msa1232700:three_prime_UTR
TAAATATAGATATATAGTAC+TGG 0.527570 8_2:+9276872 Msa1232700:three_prime_UTR
ACAATAATAGGGATCGTATC+CGG 0.528668 8_2:-9277337 None:intergenic
GACTGCTCTTGGAACAGCTA+TGG 0.528783 8_2:+9274616 Msa1232700:three_prime_UTR
GCATATATAATACCTGCAAA+AGG 0.531461 8_2:-9276512 None:intergenic
CAAGAGATGATGTAGGAAGG+AGG 0.533092 8_2:-9276693 None:intergenic
GGATCAGAAATTAGGTGATG+AGG 0.534429 8_2:+9273202 Msa1232700:CDS
CAACACAGTGTGCAGTTTGG+CGG 0.540395 8_2:-9276784 None:intergenic
AATAATATAAGAAAATGAAA+AGG 0.542918 8_2:-9276534 None:intergenic
ATATGGCTAAGGCAAGTCCC+TGG 0.544792 8_2:-9279899 None:intergenic
TCCATCGGCATATTACTGAC+AGG 0.547715 8_2:+9275550 Msa1232700:three_prime_UTR
GAACAAAGCGATTAAACTGT+AGG 0.548352 8_2:-9276915 None:intergenic
TGTAGGAAGGAGGTAAAAGA+GGG 0.550336 8_2:-9276683 None:intergenic
AGCCAAATATGTTATTCTTG+AGG 0.551577 8_2:+9279357 Msa1232700:three_prime_UTR
ATTGAAAAGAAAGAATCCTA+TGG 0.555348 8_2:+9277510 Msa1232700:three_prime_UTR
AGTGGAGAACAATTTGGTGG+AGG 0.555552 8_2:+9277210 Msa1232700:three_prime_UTR
AGGAAGAATTGAGCGGAGGA+GGG 0.555907 8_2:-9276656 None:intergenic
GATGATAATGATGGTGGTGA+TGG 0.556719 8_2:+9273167 Msa1232700:CDS
GTGGAGAACAATTTGGTGGA+GGG 0.560757 8_2:+9277211 Msa1232700:three_prime_UTR
CCCTTCAAAGTTGTCAAACA+CGG 0.562020 8_2:+9277024 Msa1232700:three_prime_UTR
GCAGTCGGGACAACTGTGAA+AGG 0.567917 8_2:-9274599 None:intergenic
AAGCAATGATTTCGAAGAAG+AGG 0.568201 8_2:+9279860 Msa1232700:three_prime_UTR
AATAGCAGGGGTTGTTAAGG+AGG 0.572240 8_2:+9278883 Msa1232700:three_prime_UTR
ATCGTACTAGCACCATTCAT+CGG 0.574131 8_2:-9273347 None:intergenic
ATAATGATGGTGGTGATGGA+AGG 0.581801 8_2:+9273171 Msa1232700:CDS
ATATTGAAGACAGTCCTGAA+AGG 0.583185 8_2:+9273426 Msa1232700:CDS
TGGCGTTGATGATATGGCTA+AGG 0.583630 8_2:-9279910 None:intergenic
AGATACCAGAAGCTTCATGC+AGG 0.583657 8_2:+9279298 Msa1232700:intron
TAAGAGGAAGAATTGAGCGG+AGG 0.583756 8_2:-9276660 None:intergenic
GGTTTGAATTGGAAGGTTGG+AGG 0.584315 8_2:+9275489 Msa1232700:intron
TTGGACCGTCCATACTTCAC+AGG 0.586362 8_2:+9276831 Msa1232700:three_prime_UTR
TTGTTGATCCATAAGAAACA+AGG 0.586605 8_2:+9277047 Msa1232700:three_prime_UTR
GTTGAAAAGAATGAGGTGCA+AGG 0.586920 8_2:+9273266 Msa1232700:CDS
TAGCTGTTCCAAGAGCAGTC+GGG 0.589209 8_2:-9274613 None:intergenic
ACCTGTCAGTAATATGCCGA+TGG 0.590074 8_2:-9275551 None:intergenic
ATAGCTGTTCCAAGAGCAGT+CGG 0.592561 8_2:-9274614 None:intergenic
AGTCCTGAAAGGGGAACAGT+TGG 0.594658 8_2:+9273437 Msa1232700:CDS
TGGAGCTACATAGCTCATCA+AGG 0.595512 8_2:-9278526 None:intergenic
GATGATTCTGTTTATAGGAG+AGG 0.598444 8_2:+9273374 Msa1232700:CDS
GTGGTGACTCGTATGATTCG+GGG 0.601391 8_2:+9273459 Msa1232700:CDS
AGCAATGATTTCGAAGAAGA+GGG 0.603074 8_2:+9279861 Msa1232700:three_prime_UTR
AAAAGTGGAGAACAATTTGG+TGG 0.607879 8_2:+9277207 Msa1232700:three_prime_UTR
CCGTCACAGTCACAATAGCA+GGG 0.608410 8_2:+9278870 Msa1232700:three_prime_UTR
GGAAAGCAAAAGCAAACAAG+AGG 0.608751 8_2:-9274872 None:intergenic
GGGTAAGAGGAAGAATTGAG+CGG 0.613826 8_2:-9276663 None:intergenic
TGGTGACTCGTATGATTCGG+GGG 0.616100 8_2:+9273460 Msa1232700:CDS
GGCTACCTGTGAAGTATGGA+CGG 0.616357 8_2:-9276836 None:intergenic
AATTGATACCAATATGGTGA+CGG 0.618158 8_2:-9278906 None:intergenic
TAATGATGGTGGTGATGGAA+GGG 0.620916 8_2:+9273172 Msa1232700:CDS
GATGAATGGTGCTAGTACGA+TGG 0.623958 8_2:+9273349 Msa1232700:CDS
TGGAGAACAATTTGGTGGAG+GGG 0.626348 8_2:+9277212 Msa1232700:three_prime_UTR
TGTAGCTCCAGTAATGGCTG+TGG 0.626348 8_2:+9278539 Msa1232700:three_prime_UTR
GACAGAATAGAAGAGAGCAT+TGG 0.631652 8_2:-9279930 None:intergenic
TGTTGATCCATAAGAAACAA+GGG 0.638024 8_2:+9277048 Msa1232700:three_prime_UTR
GAGCTATGTAGCTCCAGTAA+TGG 0.650395 8_2:+9278533 Msa1232700:three_prime_UTR
ATTGAAGACAGTCCTGAAAG+GGG 0.665406 8_2:+9273428 Msa1232700:CDS
CCCTGCTATTGTGACTGTGA+CGG 0.667298 8_2:-9278870 None:intergenic
CAATAAATAAGAGTTCTCAC+CGG 0.670931 8_2:+9277318 Msa1232700:three_prime_UTR
GTTGATCCATAAGAAACAAG+GGG 0.676845 8_2:+9277049 Msa1232700:three_prime_UTR
CGTCACAGTCACAATAGCAG+GGG 0.682759 8_2:+9278871 Msa1232700:three_prime_UTR
GCTTCATGCAGGTGACAATG+TGG 0.684466 8_2:+9279309 Msa1232700:three_prime_UTR
GCTATGTTTAACGGTGACGC+CGG 0.687645 8_2:+9277141 Msa1232700:three_prime_UTR
GAGGAGATGGATGAACAAGA+TGG 0.689009 8_2:+9279376 Msa1232700:three_prime_UTR
TGACGCCGGCTACAACCTTG+AGG 0.693977 8_2:+9277155 Msa1232700:three_prime_UTR
TGTGACGACGATGATAATGA+TGG 0.708588 8_2:+9273158 Msa1232700:CDS
AATAATGCAGATCTTACACG+AGG 0.710389 8_2:-9276810 None:intergenic
GGTGACTCGTATGATTCGGG+GGG 0.712537 8_2:+9273461 Msa1232700:CDS
GAGATGGATGAACAAGATGG+TGG 0.719797 8_2:+9279379 Msa1232700:three_prime_UTR
TTGATCCATAAGAAACAAGG+GGG 0.726217 8_2:+9277050 Msa1232700:three_prime_UTR
GACGACGATGATAATGATGG+TGG 0.757338 8_2:+9273161 Msa1232700:CDS
TAATGCAAGAGAAAGAAGTG+CGG 0.763184 8_2:-9278565 None:intergenic
ATAATGCAGATCTTACACGA+GGG 0.785253 8_2:-9276809 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATATATATATATA+GGG - chr8_2:9277756-9277775 None:intergenic 0.0%
!!! ATTAAACATTCTAAAATTTA+AGG + chr8_2:9274957-9274976 Msa1232700:intron 10.0%
!! AATAATATAAGAAAATGAAA+AGG - chr8_2:9276537-9276556 None:intergenic 10.0%
!!! ATATTTTATATATTCATTTG+TGG + chr8_2:9279489-9279508 Msa1232700:intron 10.0%
!!! AAATATTTTAATACAATACT+AGG - chr8_2:9280065-9280084 None:intergenic 10.0%
!! AGAAAAATAAATAAAATTTG+GGG - chr8_2:9280284-9280303 None:intergenic 10.0%
!! CAGAAAAATAAATAAAATTT+GGG - chr8_2:9280285-9280304 None:intergenic 10.0%
!! CTTTAATATGATAATTAAGT+AGG + chr8_2:9274119-9274138 Msa1232700:intron 15.0%
!!! ATATGAAATGTTTTAACAAT+AGG + chr8_2:9274417-9274436 Msa1232700:intron 15.0%
!!! TGTCATTTAATTATAAATGT+TGG + chr8_2:9275468-9275487 Msa1232700:intron 15.0%
!! TGAAATGATAAATAATACTA+TGG - chr8_2:9275598-9275617 None:intergenic 15.0%
!!! TATTTTTCTTTCCTAAATTA+AGG + chr8_2:9275750-9275769 Msa1232700:intron 15.0%
!! TTAAAATATCAACTTTACAT+CGG + chr8_2:9275855-9275874 Msa1232700:intron 15.0%
!! TTTATACTAACAAATTAGTA+TGG + chr8_2:9276122-9276141 Msa1232700:intron 15.0%
!!! TCATTTTCTTATATTATTGT+TGG + chr8_2:9276539-9276558 Msa1232700:three_prime_UTR 15.0%
!!! CATTTTCTTATATTATTGTT+GGG + chr8_2:9276540-9276559 Msa1232700:three_prime_UTR 15.0%
!! ATATATCTATATTTAGGAAT+TGG - chr8_2:9276867-9276886 None:intergenic 15.0%
!! AGTACTATATATCTATATTT+AGG - chr8_2:9276873-9276892 None:intergenic 15.0%
!! TAAATATAGATATATAGTAC+TGG + chr8_2:9276872-9276891 Msa1232700:three_prime_UTR 15.0%
!! CAACTGTTTATTATATTTAA+TGG + chr8_2:9277269-9277288 Msa1232700:three_prime_UTR 15.0%
!! AGTTTATTTATTGAAAACAT+TGG + chr8_2:9277554-9277573 Msa1232700:intron 15.0%
!! TATAATTAATGTTCGATTTA+AGG - chr8_2:9277858-9277877 None:intergenic 15.0%
!!! TCTACATTTTTTTATATGAT+TGG + chr8_2:9278942-9278961 Msa1232700:intron 15.0%
!! TAAAATCATATTAATGATGA+AGG + chr8_2:9279535-9279554 Msa1232700:intron 15.0%
!!! GATTTTCTTTTGATAAGTTT+CGG + chr8_2:9273309-9273328 Msa1232700:CDS 20.0%
!! TTGATGTTTACATTTATTGA+TGG + chr8_2:9273759-9273778 Msa1232700:intron 20.0%
!! TGGATAGTATTCATTAAAAA+GGG - chr8_2:9273957-9273976 None:intergenic 20.0%
!! AAATTTATGAGACCAAAAAT+AGG - chr8_2:9274015-9274034 None:intergenic 20.0%
!!! TGTAACTTCATAATACATTT+TGG + chr8_2:9274151-9274170 Msa1232700:intron 20.0%
!! ACAGAATTACAAATTATATG+CGG - chr8_2:9274233-9274252 None:intergenic 20.0%
!! GATTACAAAAACAAAATGAA+AGG - chr8_2:9274907-9274926 None:intergenic 20.0%
!!! AATTTCTGATATAGTCTTTT+AGG - chr8_2:9275192-9275211 None:intergenic 20.0%
!! TTCTTGAATAATCATATGTT+TGG + chr8_2:9275397-9275416 Msa1232700:intron 20.0%
!!! TTATAAATGTTGGTTTGAAT+TGG + chr8_2:9275478-9275497 Msa1232700:intron 20.0%
!!! TTTTGTAGTTTCCTTAATTT+AGG - chr8_2:9275764-9275783 None:intergenic 20.0%
!! TATTCGTCTATCAATTATAA+TGG + chr8_2:9276210-9276229 Msa1232700:intron 20.0%
!!! TTGGTTTTTCTATAAATGAT+TGG + chr8_2:9276233-9276252 Msa1232700:intron 20.0%
!!! TTAGTTTTGAATTATTGTTG+AGG - chr8_2:9276371-9276390 None:intergenic 20.0%
!!! TAATGTCTTCAAGTTTATTT+TGG + chr8_2:9276388-9276407 Msa1232700:intron 20.0%
!!! AAGAAACAGAATTTGAAATT+TGG + chr8_2:9276427-9276446 Msa1232700:three_prime_UTR 20.0%
!!! AGAAACAGAATTTGAAATTT+GGG + chr8_2:9276428-9276447 Msa1232700:three_prime_UTR 20.0%
!! TAACAAAAGATTCAGATTAA+AGG + chr8_2:9276610-9276629 Msa1232700:three_prime_UTR 20.0%
!! AAAATTACACTGTAAATGTA+AGG - chr8_2:9277083-9277102 None:intergenic 20.0%
!!! TATTTAATTTTTACCAGTCA+TGG + chr8_2:9277884-9277903 Msa1232700:intron 20.0%
!!! TATTGACAATGATTTCTTTT+CGG - chr8_2:9277974-9277993 None:intergenic 20.0%
!!! TCTACAATATTTTTCACATT+AGG - chr8_2:9278097-9278116 None:intergenic 20.0%
!!! ATTGAACTTATAATTTTCCT+TGG - chr8_2:9278229-9278248 None:intergenic 20.0%
!! TATAAGTTCAATCATTATGA+AGG + chr8_2:9278237-9278256 Msa1232700:intron 20.0%
!! AGTCAAATATATATATCAGA+GGG - chr8_2:9278711-9278730 None:intergenic 20.0%
!! AAGTCAAATATATATATCAG+AGG - chr8_2:9278712-9278731 None:intergenic 20.0%
!! AAAGTTAATTGATACCAATA+TGG - chr8_2:9278915-9278934 None:intergenic 20.0%
!! ACTTTGGATATGAAATTATT+TGG - chr8_2:9279425-9279444 None:intergenic 20.0%
!! ATTTAACTGTATCAAAGAAA+AGG - chr8_2:9279451-9279470 None:intergenic 20.0%
!!! TTTTCTTTGATACAGTTAAA+TGG + chr8_2:9279450-9279469 Msa1232700:intron 20.0%
!!! ATTATTTGAGACATGAATAT+TGG + chr8_2:9279703-9279722 Msa1232700:intron 20.0%
!! TATATGTTGTAGATCATAAT+AGG + chr8_2:9280006-9280025 Msa1232700:three_prime_UTR 20.0%
!!! AATGCATCTAAAATATTAAG+TGG - chr8_2:9280094-9280113 None:intergenic 20.0%
!!! TTACTCAACAACTATATTTT+TGG + chr8_2:9280148-9280167 Msa1232700:three_prime_UTR 20.0%
!!! TACTCAACAACTATATTTTT+GGG + chr8_2:9280149-9280168 Msa1232700:three_prime_UTR 20.0%
!! CTATGTTTTTCATATTTGTG+TGG + chr8_2:9273546-9273565 Msa1232700:CDS 25.0%
!!! GTTTTAGTTGGCATTTATAT+TGG + chr8_2:9273619-9273638 Msa1232700:intron 25.0%
!!! GAGTTTAATTTTGATACACT+CGG + chr8_2:9273641-9273660 Msa1232700:intron 25.0%
! ATCACAAACAACACTAAAAA+GGG - chr8_2:9273840-9273859 None:intergenic 25.0%
!!! ATCGTTATATGTTTTGAAAC+AGG + chr8_2:9273886-9273905 Msa1232700:intron 25.0%
! AGGTATAATAAAAGTCTGTT+GGG + chr8_2:9273906-9273925 Msa1232700:intron 25.0%
! GTGGATAGTATTCATTAAAA+AGG - chr8_2:9273958-9273977 None:intergenic 25.0%
!! CGAAATTTATCACCTATTTT+TGG + chr8_2:9274000-9274019 Msa1232700:intron 25.0%
!!! TGGTATTCTATGTTTTAACT+TGG + chr8_2:9274092-9274111 Msa1232700:intron 25.0%
!! GCATATAATTTGTAATTCTG+TGG + chr8_2:9274232-9274251 Msa1232700:intron 25.0%
! ATTAAGATTCTAATGTTACG+TGG + chr8_2:9274305-9274324 Msa1232700:intron 25.0%
!!! TGTTTTAACAATAGGTTGAT+TGG + chr8_2:9274425-9274444 Msa1232700:intron 25.0%
!! GTTAGTTGTTTCCTTAAAAA+TGG - chr8_2:9274785-9274804 None:intergenic 25.0%
! AAAGGAAAGGTAAATAAAGA+GGG - chr8_2:9274816-9274835 None:intergenic 25.0%
! AAAAGGAAAGGTAAATAAAG+AGG - chr8_2:9274817-9274836 None:intergenic 25.0%
! GATTTACACTGCAAAATAAA+AGG - chr8_2:9274834-9274853 None:intergenic 25.0%
!! ATTCCTGATAGTTTAAAACT+TGG - chr8_2:9275517-9275536 None:intergenic 25.0%
! TAACTTTCTTACTACTGTAA+GGG - chr8_2:9275937-9275956 None:intergenic 25.0%
! ATAACTTTCTTACTACTGTA+AGG - chr8_2:9275938-9275957 None:intergenic 25.0%
! TTTCTATAAATGATTGGAAC+AGG + chr8_2:9276239-9276258 Msa1232700:intron 25.0%
! TTCTATAAATGATTGGAACA+GGG + chr8_2:9276240-9276259 Msa1232700:intron 25.0%
!! GAAACAGAATTTGAAATTTG+GGG + chr8_2:9276429-9276448 Msa1232700:three_prime_UTR 25.0%
!!! ATTCAGATTAAAGGTTTTGT+TGG + chr8_2:9276619-9276638 Msa1232700:three_prime_UTR 25.0%
!!! ACAATTTGCATTTTTCAGAA+GGG - chr8_2:9276745-9276764 None:intergenic 25.0%
! TATATTTAGGAATTGGAACT+AGG - chr8_2:9276860-9276879 None:intergenic 25.0%
!!! GTTTTGGGATTTTAATTTGT+TGG - chr8_2:9277005-9277024 None:intergenic 25.0%
!! AGGATTCTTTCTTTTCAATT+TGG - chr8_2:9277509-9277528 None:intergenic 25.0%
! ATTGAAAAGAAAGAATCCTA+TGG + chr8_2:9277510-9277529 Msa1232700:three_prime_UTR 25.0%
! AATAAACTATTACATGTGCA+AGG - chr8_2:9277542-9277561 None:intergenic 25.0%
! GGTATTGTTAGATTTAGATT+AGG + chr8_2:9277575-9277594 Msa1232700:intron 25.0%
! AGCAAGTTATAACTAAAAAG+TGG + chr8_2:9277668-9277687 Msa1232700:intron 25.0%
! AATACTCAATATCTGTTAAG+AGG + chr8_2:9278193-9278212 Msa1232700:intron 25.0%
! TCAATCATTATGAAGGATTT+AGG + chr8_2:9278244-9278263 Msa1232700:intron 25.0%
!!! TATCAAAGTACTCATTTTCT+CGG - chr8_2:9278608-9278627 None:intergenic 25.0%
! ATAAACTCCTACCATAAAAA+AGG - chr8_2:9278685-9278704 None:intergenic 25.0%
!!! ACCTTATTTTGTTGTGTTTA+CGG + chr8_2:9278750-9278769 Msa1232700:intron 25.0%
! TTATATCTTTATCTTCTTGC+AGG + chr8_2:9278811-9278830 Msa1232700:intron 25.0%
! AGATCATCATACAAAAGATT+CGG + chr8_2:9279333-9279352 Msa1232700:three_prime_UTR 25.0%
! TGAAATTATTTGGTCCATAT+AGG - chr8_2:9279415-9279434 None:intergenic 25.0%
! AATCATATTAATGATGAAGG+CGG + chr8_2:9279538-9279557 Msa1232700:intron 25.0%
!!! TACCTTTTTTACAATTAGCA+AGG + chr8_2:9279588-9279607 Msa1232700:intron 25.0%
!!! ACCTTTTTTACAATTAGCAA+GGG + chr8_2:9279589-9279608 Msa1232700:intron 25.0%
! AATAATGAACTGATGTTACA+TGG - chr8_2:9279633-9279652 None:intergenic 25.0%
! TGAATTGATGTTACATTACA+TGG - chr8_2:9279684-9279703 None:intergenic 25.0%
!! AGTTTATTGACTGAGAATTA+TGG - chr8_2:9279784-9279803 None:intergenic 25.0%
!! GATTATTCAGTTACAGATTT+TGG + chr8_2:9279962-9279981 Msa1232700:three_prime_UTR 25.0%
!!! ACTCAACAACTATATTTTTG+GGG + chr8_2:9280150-9280169 Msa1232700:three_prime_UTR 25.0%
!!! TATTTTTGGGGAAAAAATGT+TGG + chr8_2:9280162-9280181 Msa1232700:three_prime_UTR 25.0%
!! GCTATTGATGATTTTGATAG+TGG + chr8_2:9273089-9273108 Msa1232700:CDS 30.0%
! GTGATTTTGGATCAGAAATT+AGG + chr8_2:9273194-9273213 Msa1232700:CDS 30.0%
AACAAAAGGCAACTCAAAAA+CGG - chr8_2:9273249-9273268 None:intergenic 30.0%
! ACCTCATTCTTTTCAACAAA+AGG - chr8_2:9273263-9273282 None:intergenic 30.0%
! TTCTTTTGATAAGTTTCGGA+AGG + chr8_2:9273313-9273332 Msa1232700:CDS 30.0%
CAAGGTCAAAAATAAACTGA+AGG - chr8_2:9273576-9273595 None:intergenic 30.0%
!!! TTTACACTGTTGGTTTTAGT+TGG + chr8_2:9273607-9273626 Msa1232700:intron 30.0%
CATCACAAACAACACTAAAA+AGG - chr8_2:9273841-9273860 None:intergenic 30.0%
CAGGTATAATAAAAGTCTGT+TGG + chr8_2:9273905-9273924 Msa1232700:intron 30.0%
TATTCATTAAAAAGGGAGCT+GGG - chr8_2:9273950-9273969 None:intergenic 30.0%
! TTGTTACTTGTTGAGTGTTA+TGG + chr8_2:9274195-9274214 Msa1232700:intron 30.0%
!! CGCTAAATTTTGAGTGAAAA+TGG - chr8_2:9274397-9274416 None:intergenic 30.0%
GAGATAAAAACCACAGAAAA+CGG - chr8_2:9274456-9274475 None:intergenic 30.0%
!! CTACATTTGCTCCATTTTTA+AGG + chr8_2:9274771-9274790 Msa1232700:intron 30.0%
AAGGAAAGGTAAATAAAGAG+GGG - chr8_2:9274815-9274834 None:intergenic 30.0%
ACACTGCAAAATAAAAGGAA+AGG - chr8_2:9274829-9274848 None:intergenic 30.0%
TGCATTGCTAGGATAATTTA+TGG + chr8_2:9274983-9275002 Msa1232700:intron 30.0%
GCATTGCTAGGATAATTTAT+GGG + chr8_2:9274984-9275003 Msa1232700:intron 30.0%
! AAGACAATAGGTGTTCTTTT+TGG + chr8_2:9275064-9275083 Msa1232700:intron 30.0%
CTTTACAATGCAAGAAATTG+TGG + chr8_2:9275217-9275236 Msa1232700:intron 30.0%
AACACAAACTAATATTCGAG+AGG - chr8_2:9275431-9275450 None:intergenic 30.0%
!! AAATGTTGGTTTGAATTGGA+AGG + chr8_2:9275482-9275501 Msa1232700:intron 30.0%
!!! GTACCAAGTTTTAAACTATC+AGG + chr8_2:9275511-9275530 Msa1232700:three_prime_UTR 30.0%
!! ATCATTTTAGTCATCTCCAT+CGG + chr8_2:9275535-9275554 Msa1232700:three_prime_UTR 30.0%
AAATTGAAAGAACAGCATGA+TGG - chr8_2:9275833-9275852 None:intergenic 30.0%
! ATCTTAAAAAGGAGGGTTTT+TGG - chr8_2:9275898-9275917 None:intergenic 30.0%
ATAGAGGATCTTAAAAAGGA+GGG - chr8_2:9275905-9275924 None:intergenic 30.0%
TTGGATAGAGGATCTTAAAA+AGG - chr8_2:9275909-9275928 None:intergenic 30.0%
TGATTCCTGATAGGATATAA+TGG - chr8_2:9276033-9276052 None:intergenic 30.0%
TATCAAACATGATTCCTGAT+AGG - chr8_2:9276042-9276061 None:intergenic 30.0%
GAATCATGTTTGATATCCAA+AGG + chr8_2:9276047-9276066 Msa1232700:intron 30.0%
TAAGCTCTTCATATTCTTGT+TGG + chr8_2:9276187-9276206 Msa1232700:intron 30.0%
CGTCTATCAATTATAATGGT+TGG + chr8_2:9276214-9276233 Msa1232700:intron 30.0%
! TTAATATTCTAGAGAGCCAT+GGG - chr8_2:9276317-9276336 None:intergenic 30.0%
! TTTAATATTCTAGAGAGCCA+TGG - chr8_2:9276318-9276337 None:intergenic 30.0%
GCATATATAATACCTGCAAA+AGG - chr8_2:9276515-9276534 None:intergenic 30.0%
!! CAATTTGCATTTTTCAGAAG+GGG - chr8_2:9276744-9276763 None:intergenic 30.0%
!! CACAATTTGCATTTTTCAGA+AGG - chr8_2:9276746-9276765 None:intergenic 30.0%
CAATCATGTTTCTCATTTGT+CGG - chr8_2:9276976-9276995 None:intergenic 30.0%
TTGTTGATCCATAAGAAACA+AGG + chr8_2:9277047-9277066 Msa1232700:three_prime_UTR 30.0%
TGTTGATCCATAAGAAACAA+GGG + chr8_2:9277048-9277067 Msa1232700:three_prime_UTR 30.0%
! GTTTTCGTTGCTATGTTTAA+CGG + chr8_2:9277132-9277151 Msa1232700:three_prime_UTR 30.0%
TGAATGTGAAAAGGTAAAAG+TGG + chr8_2:9277192-9277211 Msa1232700:three_prime_UTR 30.0%
CAATAAATAAGAGTTCTCAC+CGG + chr8_2:9277318-9277337 Msa1232700:three_prime_UTR 30.0%
! ACATTCTTGCTTCATTTTCT+TGG + chr8_2:9277441-9277460 Msa1232700:three_prime_UTR 30.0%
! CATTCTTGCTTCATTTTCTT+GGG + chr8_2:9277442-9277461 Msa1232700:three_prime_UTR 30.0%
! ACACCAACTAATTTTTGTGA+AGG + chr8_2:9277637-9277656 Msa1232700:intron 30.0%
ACACCTTCACAAAAATTAGT+TGG - chr8_2:9277643-9277662 None:intergenic 30.0%
TTTAAGGATTGATTGACCAA+AGG - chr8_2:9277842-9277861 None:intergenic 30.0%
TGTTCTATGGAACTAAATGT+TGG + chr8_2:9277937-9277956 Msa1232700:intron 30.0%
GTTCTATGGAACTAAATGTT+GGG + chr8_2:9277938-9277957 Msa1232700:intron 30.0%
! AGTTTTGCCTTAGATGATTT+AGG + chr8_2:9278116-9278135 Msa1232700:intron 30.0%
! GGATTTAGGTTTAAAATGTC+TGG + chr8_2:9278258-9278277 Msa1232700:intron 30.0%
TGTTAAACATGATTTACGAC+AGG + chr8_2:9278281-9278300 Msa1232700:intron 30.0%
AAAGATAGTGCTATCTACAA+AGG - chr8_2:9278399-9278418 None:intergenic 30.0%
TACAAGTAGAAGATAAACAC+AGG - chr8_2:9278439-9278458 None:intergenic 30.0%
!!! ATACTTTTTCCAATGACTTC+AGG + chr8_2:9278486-9278505 Msa1232700:intron 30.0%
! ATGAGTACTTTGATAGTTCA+TGG + chr8_2:9278613-9278632 Msa1232700:three_prime_UTR 30.0%
ACCGTAAACACAACAAAATA+AGG - chr8_2:9278754-9278773 None:intergenic 30.0%
AATTGATACCAATATGGTGA+CGG - chr8_2:9278909-9278928 None:intergenic 30.0%
!! TTTTTATATGATTGGTCCAG+TGG + chr8_2:9278950-9278969 Msa1232700:intron 30.0%
! TAAAGCACTATACGAGTAAT+AGG - chr8_2:9278980-9278999 None:intergenic 30.0%
AATAATCTAGATTCATGCTC+AGG + chr8_2:9279005-9279024 Msa1232700:intron 30.0%
CCAGAACATTAAGTTCAATA+TGG - chr8_2:9279039-9279058 None:intergenic 30.0%
CCATATTGAACTTAATGTTC+TGG + chr8_2:9279036-9279055 Msa1232700:intron 30.0%
TTTACTTGGTTGAAAGGATT+TGG + chr8_2:9279107-9279126 Msa1232700:three_prime_UTR 30.0%
ATTTGGCCTATTCACTATTA+TGG + chr8_2:9279124-9279143 Msa1232700:three_prime_UTR 30.0%
AACCTGTTCACTTAAATGTT+TGG + chr8_2:9279268-9279287 Msa1232700:intron 30.0%
AACCAAACATTTAAGTGAAC+AGG - chr8_2:9279273-9279292 None:intergenic 30.0%
AGCCAAATATGTTATTCTTG+AGG + chr8_2:9279357-9279376 Msa1232700:three_prime_UTR 30.0%
CTCCTCAAGAATAACATATT+TGG - chr8_2:9279362-9279381 None:intergenic 30.0%
ATATGTTATTCTTGAGGAGA+TGG + chr8_2:9279363-9279382 Msa1232700:three_prime_UTR 30.0%
ATCAAAGAAAAGGCTTACTT+TGG - chr8_2:9279441-9279460 None:intergenic 30.0%
ATCATATTAATGATGAAGGC+GGG + chr8_2:9279539-9279558 Msa1232700:intron 30.0%
TCCCTTGCTAATTGTAAAAA+AGG - chr8_2:9279593-9279612 None:intergenic 30.0%
ATCAGTTCATTATTTGAGCA+AGG + chr8_2:9279639-9279658 Msa1232700:intron 30.0%
TCAGTTCATTATTTGAGCAA+GGG + chr8_2:9279640-9279659 Msa1232700:intron 30.0%
TTTCTTACCAATACAGTGAT+TGG + chr8_2:9280119-9280138 Msa1232700:three_prime_UTR 30.0%
! GGATACAATACAAGTTTGTT+TGG - chr8_2:9280229-9280248 None:intergenic 30.0%
!! TCAGAGAGTTGTAGCTTTAA+AGG + chr8_2:9273062-9273081 Msa1232700:CDS 35.0%
!! CAGAGAGTTGTAGCTTTAAA+GGG + chr8_2:9273063-9273082 Msa1232700:CDS 35.0%
!!! GATTTTGATAGTGGAAGTTC+AGG + chr8_2:9273098-9273117 Msa1232700:CDS 35.0%
! GCCTTTTGTTGAAAAGAATG+AGG + chr8_2:9273259-9273278 Msa1232700:CDS 35.0%
!!! TGCAAGGAAGAGTTTTAGAT+AGG + chr8_2:9273282-9273301 Msa1232700:CDS 35.0%
!!! GCAAGGAAGAGTTTTAGATA+GGG + chr8_2:9273283-9273302 Msa1232700:CDS 35.0%
TTGATAAGTTTCGGAAGGAA+AGG + chr8_2:9273318-9273337 Msa1232700:CDS 35.0%
TGGACGATGATTCTGTTTAT+AGG + chr8_2:9273369-9273388 Msa1232700:CDS 35.0%
GATGATTCTGTTTATAGGAG+AGG + chr8_2:9273374-9273393 Msa1232700:CDS 35.0%
TCTGTTTATAGGAGAGGTAA+TGG + chr8_2:9273380-9273399 Msa1232700:CDS 35.0%
GGACTGTCTTCAATATCAAA+AGG - chr8_2:9273422-9273441 None:intergenic 35.0%
ATATTGAAGACAGTCCTGAA+AGG + chr8_2:9273426-9273445 Msa1232700:CDS 35.0%
TATTGAAGACAGTCCTGAAA+GGG + chr8_2:9273427-9273446 Msa1232700:CDS 35.0%
! GTCTTCAAGATATTTGCTAC+AGG - chr8_2:9273527-9273546 None:intergenic 35.0%
TAAAACCAACAGTGTAAACG+AGG - chr8_2:9273605-9273624 None:intergenic 35.0%
GATAAGAGACGAAGCATAAA+AGG - chr8_2:9273869-9273888 None:intergenic 35.0%
GTATTCATTAAAAAGGGAGC+TGG - chr8_2:9273951-9273970 None:intergenic 35.0%
TATCCACTTTGTAATGCAAG+CGG + chr8_2:9273971-9273990 Msa1232700:intron 35.0%
AGACTAATGTTGTCATGTCT+TGG + chr8_2:9274036-9274055 Msa1232700:intron 35.0%
TAATGTTGTCATGTCTTGGA+GGG + chr8_2:9274040-9274059 Msa1232700:intron 35.0%
TGCGAGGTAAATTTCATTCT+TGG + chr8_2:9274072-9274091 Msa1232700:intron 35.0%
! TTTGCCTCATTTTCCATGTT+TGG - chr8_2:9274332-9274351 None:intergenic 35.0%
GAAAATGAGGCAAATAGACT+AGG + chr8_2:9274338-9274357 Msa1232700:intron 35.0%
CTCTCACTCTTATGATTATG+TGG + chr8_2:9274361-9274380 Msa1232700:intron 35.0%
! TTGCATAAAAGTGTGCTTCA+GGG - chr8_2:9274511-9274530 None:intergenic 35.0%
! TTTGCATAAAAGTGTGCTTC+AGG - chr8_2:9274512-9274531 None:intergenic 35.0%
ATATCAACTAATGCCACAGA+TGG + chr8_2:9274570-9274589 Msa1232700:intron 35.0%
! ACATTTGCTACAATGGTTTG+TGG + chr8_2:9274680-9274699 Msa1232700:intron 35.0%
! TGGTAATGTTACATCAGAAC+CGG + chr8_2:9274745-9274764 Msa1232700:intron 35.0%
AAAGGTAAATAAAGAGGGGA+AGG - chr8_2:9274811-9274830 None:intergenic 35.0%
!! TCTTGTTTGCTTTTGCTTTC+CGG + chr8_2:9274874-9274893 Msa1232700:three_prime_UTR 35.0%
CAAAATGAAAGGAAACTCAC+CGG - chr8_2:9274896-9274915 None:intergenic 35.0%
TGCATATCTCAGAAGACAAT+AGG + chr8_2:9275052-9275071 Msa1232700:intron 35.0%
AGGCATCATAGATGAGAATT+GGG - chr8_2:9275172-9275191 None:intergenic 35.0%
TAGGCATCATAGATGAGAAT+TGG - chr8_2:9275173-9275192 None:intergenic 35.0%
!! ACCTAAAAGTGCTGTTAGAA+TGG + chr8_2:9275277-9275296 Msa1232700:intron 35.0%
!!! TTCATGCTGCTTTGTGATTT+TGG + chr8_2:9275374-9275393 Msa1232700:intron 35.0%
!! ATGTACATTGATTCGCACTT+AGG + chr8_2:9275618-9275637 Msa1232700:intron 35.0%
! TACTTCTGTAGGGTATCTTT+GGG + chr8_2:9275698-9275717 Msa1232700:intron 35.0%
!! TAAAAAGGAGGGTTTTTGGA+GGG - chr8_2:9275894-9275913 None:intergenic 35.0%
!! TTAAAAAGGAGGGTTTTTGG+AGG - chr8_2:9275895-9275914 None:intergenic 35.0%
GATAGAGGATCTTAAAAAGG+AGG - chr8_2:9275906-9275925 None:intergenic 35.0%
CAACTCCATTATATCCTATC+AGG + chr8_2:9276025-9276044 Msa1232700:intron 35.0%
!!! CTGTCTGTATGCTACTTTTT+TGG - chr8_2:9276086-9276105 None:intergenic 35.0%
TTATTGCCTGTTCGAAATTC+TGG - chr8_2:9276170-9276189 None:intergenic 35.0%
! CGTTAGTTATTCTTTTCCCA+TGG + chr8_2:9276298-9276317 Msa1232700:intron 35.0%
AAGTGCATTGTTCAAGCTTT+AGG + chr8_2:9276337-9276356 Msa1232700:intron 35.0%
ATAATGCAGATCTTACACGA+GGG - chr8_2:9276812-9276831 None:intergenic 35.0%
AATAATGCAGATCTTACACG+AGG - chr8_2:9276813-9276832 None:intergenic 35.0%
TCGTGTAAGATCTGCATTAT+TGG + chr8_2:9276812-9276831 Msa1232700:three_prime_UTR 35.0%
GAACAAAGCGATTAAACTGT+AGG - chr8_2:9276918-9276937 None:intergenic 35.0%
!! TGACAACTTTGAAGGGTTTT+GGG - chr8_2:9277020-9277039 None:intergenic 35.0%
!! TTGACAACTTTGAAGGGTTT+TGG - chr8_2:9277021-9277040 None:intergenic 35.0%
GTTGATCCATAAGAAACAAG+GGG + chr8_2:9277049-9277068 Msa1232700:three_prime_UTR 35.0%
TTGATCCATAAGAAACAAGG+GGG + chr8_2:9277050-9277069 Msa1232700:three_prime_UTR 35.0%
! AATTTCCCCCTTGTTTCTTA+TGG - chr8_2:9277058-9277077 None:intergenic 35.0%
TCACATTCACTTCTATGCTT+CGG - chr8_2:9277181-9277200 None:intergenic 35.0%
GCATAGAAGTGAATGTGAAA+AGG + chr8_2:9277183-9277202 Msa1232700:three_prime_UTR 35.0%
GGTAAAAGTGGAGAACAATT+TGG + chr8_2:9277204-9277223 Msa1232700:three_prime_UTR 35.0%
AAAAGTGGAGAACAATTTGG+TGG + chr8_2:9277207-9277226 Msa1232700:three_prime_UTR 35.0%
ACAATAATAGGGATCGTATC+CGG - chr8_2:9277340-9277359 None:intergenic 35.0%
TTTGTGTGTGTATGTGTAGA+TGG - chr8_2:9277381-9277400 None:intergenic 35.0%
CAAATGGCAATAGGATAACT+TGG - chr8_2:9277610-9277629 None:intergenic 35.0%
! GTCTTTTAGCAAATGGCAAT+AGG - chr8_2:9277619-9277638 None:intergenic 35.0%
!! AGTTGGTGTCTTTTAGCAAA+TGG - chr8_2:9277626-9277645 None:intergenic 35.0%
TTGCTAAAAGACACCTCTAA+AGG + chr8_2:9277714-9277733 Msa1232700:intron 35.0%
TGCTAAAAGACACCTCTAAA+GGG + chr8_2:9277715-9277734 Msa1232700:intron 35.0%
!!! ATATTTTTTTCCGCTGCCTT+TGG + chr8_2:9277823-9277842 Msa1232700:intron 35.0%
ATAAGACTGGCAATGTTCTA+TGG + chr8_2:9277924-9277943 Msa1232700:intron 35.0%
! TAAGAGGTATAGAAAGACCA+AGG + chr8_2:9278209-9278228 Msa1232700:intron 35.0%
GATAAACACAGGCAAAGAAA+AGG - chr8_2:9278428-9278447 None:intergenic 35.0%
!! TTTTTCAGACCTGAAGTCAT+TGG - chr8_2:9278498-9278517 None:intergenic 35.0%
TAATGCAAGAGAAAGAAGTG+CGG - chr8_2:9278568-9278587 None:intergenic 35.0%
TTTCTCTTGCATTAGATCCT+TGG + chr8_2:9278574-9278593 Msa1232700:three_prime_UTR 35.0%
TTCTCTTGCATTAGATCCTT+GGG + chr8_2:9278575-9278594 Msa1232700:three_prime_UTR 35.0%
AGTTTCTTGCTGATGTTCTT+TGG + chr8_2:9278648-9278667 Msa1232700:three_prime_UTR 35.0%
!!! TGGAACACTTGCCTTTTTTA+TGG + chr8_2:9278671-9278690 Msa1232700:three_prime_UTR 35.0%
!!! ACACTTGCCTTTTTTATGGT+AGG + chr8_2:9278675-9278694 Msa1232700:intron 35.0%
ACTTTCATGATGCGTTTACT+TGG + chr8_2:9279093-9279112 Msa1232700:three_prime_UTR 35.0%
CACCAACCATAATAGTGAAT+AGG - chr8_2:9279133-9279152 None:intergenic 35.0%
CTTCAATATTCACGTGATTC+AGG - chr8_2:9279836-9279855 None:intergenic 35.0%
CTGAATCACGTGAATATTGA+AGG + chr8_2:9279834-9279853 Msa1232700:intron 35.0%
AAGCAATGATTTCGAAGAAG+AGG + chr8_2:9279860-9279879 Msa1232700:three_prime_UTR 35.0%
AGCAATGATTTCGAAGAAGA+GGG + chr8_2:9279861-9279880 Msa1232700:three_prime_UTR 35.0%
GGACACAAAAATATCTTCCA+GGG + chr8_2:9279882-9279901 Msa1232700:three_prime_UTR 35.0%
ACCAATACAGTGATTGGTAA+TGG + chr8_2:9280125-9280144 Msa1232700:three_prime_UTR 35.0%
ACCATTACCAATCACTGTAT+TGG - chr8_2:9280129-9280148 None:intergenic 35.0%
!! TTTTGGGGAAAAAATGTTGG+AGG + chr8_2:9280165-9280184 Msa1232700:three_prime_UTR 35.0%
TTTGGGGAAAAAATGTTGGA+GGG + chr8_2:9280166-9280185 Msa1232700:three_prime_UTR 35.0%
GGTCAATTTCGTTGTTACAT+TGG + chr8_2:9280187-9280206 Msa1232700:three_prime_UTR 35.0%
!! ACAAGTTTGTTTGGTGTTGA+AGG - chr8_2:9280220-9280239 None:intergenic 35.0%
! TGTGACGACGATGATAATGA+TGG + chr8_2:9273158-9273177 Msa1232700:CDS 40.0%
!! GATGATAATGATGGTGGTGA+TGG + chr8_2:9273167-9273186 Msa1232700:CDS 40.0%
!! ATAATGATGGTGGTGATGGA+AGG + chr8_2:9273171-9273190 Msa1232700:CDS 40.0%
!! TAATGATGGTGGTGATGGAA+GGG + chr8_2:9273172-9273191 Msa1232700:CDS 40.0%
GGATCAGAAATTAGGTGATG+AGG + chr8_2:9273202-9273221 Msa1232700:CDS 40.0%
GTTGAAAAGAATGAGGTGCA+AGG + chr8_2:9273266-9273285 Msa1232700:CDS 40.0%
ATCGTACTAGCACCATTCAT+CGG - chr8_2:9273350-9273369 None:intergenic 40.0%
ATTGAAGACAGTCCTGAAAG+GGG + chr8_2:9273428-9273447 Msa1232700:CDS 40.0%
GTGTAAACGAGGAACTTACA+AGG - chr8_2:9273594-9273613 None:intergenic 40.0%
AAGTTCCTCGTTTACACTGT+TGG + chr8_2:9273597-9273616 Msa1232700:intron 40.0%
AAGTCTGTTGGGAGATCATA+TGG + chr8_2:9273917-9273936 Msa1232700:intron 40.0%
AGTCTGTTGGGAGATCATAT+GGG + chr8_2:9273918-9273937 Msa1232700:intron 40.0%
CTAATGTTGTCATGTCTTGG+AGG + chr8_2:9274039-9274058 Msa1232700:intron 40.0%
!!! TGGAGGGATTATTTTTTGCG+AGG + chr8_2:9274056-9274075 Msa1232700:intron 40.0%
AATGTTACGTGGTCCAAACA+TGG + chr8_2:9274316-9274335 Msa1232700:intron 40.0%
TGGTCCAAACATGGAAAATG+AGG + chr8_2:9274325-9274344 Msa1232700:intron 40.0%
! CTCTGTCACATTTGCTACAA+TGG + chr8_2:9274673-9274692 Msa1232700:three_prime_UTR 40.0%
AATGGAGCAAATGTAGAGTC+CGG - chr8_2:9274767-9274786 None:intergenic 40.0%
GCAAACAAGAGGAGAAAGAT+TGG - chr8_2:9274864-9274883 None:intergenic 40.0%
GGAAAGCAAAAGCAAACAAG+AGG - chr8_2:9274875-9274894 None:intergenic 40.0%
ATTTAAGGAGCTGCATTGCT+AGG + chr8_2:9274972-9274991 Msa1232700:intron 40.0%
TGGGAGCGATTAATGCATAA+AGG + chr8_2:9275003-9275022 Msa1232700:intron 40.0%
! GCCATTCTAACAGCACTTTT+AGG - chr8_2:9275281-9275300 None:intergenic 40.0%
!! GTTGGTTTGAATTGGAAGGT+TGG + chr8_2:9275486-9275505 Msa1232700:intron 40.0%
TTCAAAAGATCAAGCCAGCA+TGG + chr8_2:9275643-9275662 Msa1232700:intron 40.0%
AGGTACATCTGTACTTCTGT+AGG + chr8_2:9275687-9275706 Msa1232700:intron 40.0%
GGTACATCTGTACTTCTGTA+GGG + chr8_2:9275688-9275707 Msa1232700:intron 40.0%
! GTACTTCTGTAGGGTATCTT+TGG + chr8_2:9275697-9275716 Msa1232700:intron 40.0%
! TATCTTTGGGTGGAGGATTT+TGG + chr8_2:9275711-9275730 Msa1232700:intron 40.0%
TGGATGTCAACAACAACCTT+TGG - chr8_2:9276066-9276085 None:intergenic 40.0%
GTAGCATACAGACAGAAGTT+CGG + chr8_2:9276091-9276110 Msa1232700:intron 40.0%
CAGTTACCAGAATTTCGAAC+AGG + chr8_2:9276161-9276180 Msa1232700:intron 40.0%
! TATGACTCAGATCCTTTTGC+AGG + chr8_2:9276500-9276519 Msa1232700:three_prime_UTR 40.0%
! ATTATTGTTGGGAGCGTATC+TGG + chr8_2:9276551-9276570 Msa1232700:three_prime_UTR 40.0%
TGTAGGAAGGAGGTAAAAGA+GGG - chr8_2:9276686-9276705 None:intergenic 40.0%
ATGTAGGAAGGAGGTAAAAG+AGG - chr8_2:9276687-9276706 None:intergenic 40.0%
AGTCAAGAGATGATGTAGGA+AGG - chr8_2:9276699-9276718 None:intergenic 40.0%
GATGAGTCAAGAGATGATGT+AGG - chr8_2:9276703-9276722 None:intergenic 40.0%
!! TTTGCATTTTTCAGAAGGGG+AGG - chr8_2:9276741-9276760 None:intergenic 40.0%
CCGTGTTTGACAACTTTGAA+GGG - chr8_2:9277027-9277046 None:intergenic 40.0%
CCCTTCAAAGTTGTCAAACA+CGG + chr8_2:9277024-9277043 Msa1232700:three_prime_UTR 40.0%
ACCGTGTTTGACAACTTTGA+AGG - chr8_2:9277028-9277047 None:intergenic 40.0%
AATGTTCAGTTAGCGATAGC+AGG - chr8_2:9277426-9277445 None:intergenic 40.0%
! CTTGCTTCATTTTCTTGGGT+TGG + chr8_2:9277446-9277465 Msa1232700:three_prime_UTR 40.0%
ATGTGCAAGGAACTTACCAT+AGG - chr8_2:9277529-9277548 None:intergenic 40.0%
AAGTGGATAATCACACCTTG+AGG + chr8_2:9277685-9277704 Msa1232700:intron 40.0%
GATAGAAAGTTGAGAGTGAG+AGG + chr8_2:9278066-9278085 Msa1232700:intron 40.0%
GCAAGTGCCTAAATCATCTA+AGG - chr8_2:9278126-9278145 None:intergenic 40.0%
TTGCAAAGAAGACCAGAAGA+AGG + chr8_2:9278142-9278161 Msa1232700:intron 40.0%
!!! AAAGCCTTTTTCAACCACGT+GGG - chr8_2:9278337-9278356 None:intergenic 40.0%
ACATAGCTCATCAAGGTAAG+TGG - chr8_2:9278522-9278541 None:intergenic 40.0%
! TTTTCTCGGAATTCTTCCCA+AGG - chr8_2:9278594-9278613 None:intergenic 40.0%
TTCTTGCTGATGTTCTTTGG+TGG + chr8_2:9278651-9278670 Msa1232700:three_prime_UTR 40.0%
! TATATGATTGGTCCAGTGGA+TGG + chr8_2:9278954-9278973 Msa1232700:intron 40.0%
! GTTTCATGCTGTTTGTGTGT+AGG + chr8_2:9279058-9279077 Msa1232700:intron 40.0%
GATGCGTTTACTTGGTTGAA+AGG + chr8_2:9279101-9279120 Msa1232700:three_prime_UTR 40.0%
GGCCTATTCACTATTATGGT+TGG + chr8_2:9279128-9279147 Msa1232700:three_prime_UTR 40.0%
GTGGCATCTGAAAACCTATA+TGG + chr8_2:9279398-9279417 Msa1232700:three_prime_UTR 40.0%
GGGACACAAAAATATCTTCC+AGG + chr8_2:9279881-9279900 Msa1232700:three_prime_UTR 40.0%
! GACAGAATAGAAGAGAGCAT+TGG - chr8_2:9279933-9279952 None:intergenic 40.0%
!! TTTTGAGAATGTAAGGGGAG+GGG - chr8_2:9280258-9280277 None:intergenic 40.0%
!! CTTTTGAGAATGTAAGGGGA+GGG - chr8_2:9280259-9280278 None:intergenic 40.0%
!! GGAGCTTTTGAGAATGTAAG+GGG - chr8_2:9280263-9280282 None:intergenic 40.0%
!! GGGAGCTTTTGAGAATGTAA+GGG - chr8_2:9280264-9280283 None:intergenic 40.0%
!! GATAGTGGAAGTTCAGGATC+CGG + chr8_2:9273104-9273123 Msa1232700:CDS 45.0%
GAAGTTCAGGATCCGGTATT+CGG + chr8_2:9273111-9273130 Msa1232700:CDS 45.0%
! GACGACGATGATAATGATGG+TGG + chr8_2:9273161-9273180 Msa1232700:CDS 45.0%
!!! TGGTGATGGAAGGGTGATTT+TGG + chr8_2:9273181-9273200 Msa1232700:CDS 45.0%
! GATGAATGGTGCTAGTACGA+TGG + chr8_2:9273349-9273368 Msa1232700:CDS 45.0%
! TGGTGGTGACTCGTATGATT+CGG + chr8_2:9273457-9273476 Msa1232700:CDS 45.0%
GAACCGCTTGCATTACAAAG+TGG - chr8_2:9273977-9273996 None:intergenic 45.0%
!!! ATTGGTTGTGCCGTTTTCTG+TGG + chr8_2:9274443-9274462 Msa1232700:intron 45.0%
TGAAAGGCAAAGTCCATCTG+TGG - chr8_2:9274586-9274605 None:intergenic 45.0%
ATAGCTGTTCCAAGAGCAGT+CGG - chr8_2:9274617-9274636 None:intergenic 45.0%
GGTTTGAATTGGAAGGTTGG+AGG + chr8_2:9275489-9275508 Msa1232700:intron 45.0%
TCCATCGGCATATTACTGAC+AGG + chr8_2:9275550-9275569 Msa1232700:three_prime_UTR 45.0%
ACCTGTCAGTAATATGCCGA+TGG - chr8_2:9275554-9275573 None:intergenic 45.0%
TTCCTACAAGCTCAGTGGTT+AGG + chr8_2:9275667-9275686 Msa1232700:intron 45.0%
TACCTAACCACTGAGCTTGT+AGG - chr8_2:9275672-9275691 None:intergenic 45.0%
! TTCTGTAGGGTATCTTTGGG+TGG + chr8_2:9275701-9275720 Msa1232700:intron 45.0%
! TACTACTGTAAGGGTGTGCT+TGG - chr8_2:9275928-9275947 None:intergenic 45.0%
AGCGATATGGCATGCTAAGA+TGG - chr8_2:9275977-9275996 None:intergenic 45.0%
TTAGCATGCCATATCGCTCT+AGG + chr8_2:9275979-9275998 Msa1232700:intron 45.0%
CAATCCTACCTAGAGCGATA+TGG - chr8_2:9275990-9276009 None:intergenic 45.0%
! CATATCGCTCTAGGTAGGAT+TGG + chr8_2:9275988-9276007 Msa1232700:intron 45.0%
! ATGCTTGCTGCTGTTATGTC+TGG + chr8_2:9276465-9276484 Msa1232700:three_prime_UTR 45.0%
! TGCTTGCTGCTGTTATGTCT+GGG + chr8_2:9276466-9276485 Msa1232700:three_prime_UTR 45.0%
TAAGAGGAAGAATTGAGCGG+AGG - chr8_2:9276663-9276682 None:intergenic 45.0%
GGGTAAGAGGAAGAATTGAG+CGG - chr8_2:9276666-9276685 None:intergenic 45.0%
AGGAGGTAAAAGAGGGTAAG+AGG - chr8_2:9276679-9276698 None:intergenic 45.0%
CAAGAGATGATGTAGGAAGG+AGG - chr8_2:9276696-9276715 None:intergenic 45.0%
TTCAGAAGGGGAGGAAGATA+GGG - chr8_2:9276732-9276751 None:intergenic 45.0%
TTTCAGAAGGGGAGGAAGAT+AGG - chr8_2:9276733-9276752 None:intergenic 45.0%
ACTAGGCTACCTGTGAAGTA+TGG - chr8_2:9276843-9276862 None:intergenic 45.0%
! AGTGGAGAACAATTTGGTGG+AGG + chr8_2:9277210-9277229 Msa1232700:three_prime_UTR 45.0%
! GTGGAGAACAATTTGGTGGA+GGG + chr8_2:9277211-9277230 Msa1232700:three_prime_UTR 45.0%
! TGGAGAACAATTTGGTGGAG+GGG + chr8_2:9277212-9277231 Msa1232700:three_prime_UTR 45.0%
GATAATCACACCTTGAGGTG+TGG + chr8_2:9277690-9277709 Msa1232700:intron 45.0%
! TTTTAGCAAGCCACACCTCA+AGG - chr8_2:9277703-9277722 None:intergenic 45.0%
TGCTAGAAGACACCCTTTAG+AGG - chr8_2:9277730-9277749 None:intergenic 45.0%
GATTGATTGACCAAAGGCAG+CGG - chr8_2:9277836-9277855 None:intergenic 45.0%
GTGTGGACAAAATCCATGAC+TGG - chr8_2:9277900-9277919 None:intergenic 45.0%
TGTCCACACAGCTATAAGAC+TGG + chr8_2:9277911-9277930 Msa1232700:intron 45.0%
! TTGCCAGTCTTATAGCTGTG+TGG - chr8_2:9277917-9277936 None:intergenic 45.0%
CGAATGCAACAGTTTATGCG+TGG + chr8_2:9278005-9278024 Msa1232700:intron 45.0%
GACCAGAAGAAGGCCTAATA+CGG + chr8_2:9278152-9278171 Msa1232700:intron 45.0%
AGAAGAAGGCCTAATACGGA+CGG + chr8_2:9278156-9278175 Msa1232700:intron 45.0%
TGCGATTTACCGTCCGTATT+AGG - chr8_2:9278168-9278187 None:intergenic 45.0%
TCCATATAACTAACCCCACG+TGG + chr8_2:9278320-9278339 Msa1232700:intron 45.0%
!! ACCACGTGGGGTTAGTTATA+TGG - chr8_2:9278324-9278343 None:intergenic 45.0%
TAACCCCACGTGGTTGAAAA+AGG + chr8_2:9278330-9278349 Msa1232700:intron 45.0%
!!! AAGCCTTTTTCAACCACGTG+GGG - chr8_2:9278336-9278355 None:intergenic 45.0%
!!! CAAAGCCTTTTTCAACCACG+TGG - chr8_2:9278338-9278357 None:intergenic 45.0%
CACAGGCAAAGAAAAGGATC+AGG - chr8_2:9278422-9278441 None:intergenic 45.0%
TGGAGCTACATAGCTCATCA+AGG - chr8_2:9278529-9278548 None:intergenic 45.0%
GAGCTATGTAGCTCCAGTAA+TGG + chr8_2:9278533-9278552 Msa1232700:three_prime_UTR 45.0%
CACAATAGCAGGGGTTGTTA+AGG + chr8_2:9278880-9278899 Msa1232700:three_prime_UTR 45.0%
AATAGCAGGGGTTGTTAAGG+AGG + chr8_2:9278883-9278902 Msa1232700:three_prime_UTR 45.0%
! TGCTGTTTGTGTGTAGGTTG+CGG + chr8_2:9279064-9279083 Msa1232700:intron 45.0%
AGATACCAGAAGCTTCATGC+AGG + chr8_2:9279298-9279317 Msa1232700:intron 45.0%
GAGGAGATGGATGAACAAGA+TGG + chr8_2:9279376-9279395 Msa1232700:three_prime_UTR 45.0%
GAGATGGATGAACAAGATGG+TGG + chr8_2:9279379-9279398 Msa1232700:three_prime_UTR 45.0%
!! TGGCGTTGATGATATGGCTA+AGG - chr8_2:9279913-9279932 None:intergenic 45.0%
!! GAGCATTGGCGTTGATGATA+TGG - chr8_2:9279919-9279938 None:intergenic 45.0%
TTTGAGAATGTAAGGGGAGG+GGG - chr8_2:9280257-9280276 None:intergenic 45.0%
!! GCTTTTGAGAATGTAAGGGG+AGG - chr8_2:9280260-9280279 None:intergenic 45.0%
!! GGGGAGCTTTTGAGAATGTA+AGG - chr8_2:9280265-9280284 None:intergenic 45.0%
!!! AATGAAATAATTTATTTTTT+TGG + chr8_2:9274725-9274744 Msa1232700:intron 5.0%
!! TATATAAATATACAATAATA+GGG - chr8_2:9277351-9277370 None:intergenic 5.0%
!! ATATATAAATATACAATAAT+AGG - chr8_2:9277352-9277371 None:intergenic 5.0%
!! GAATATATATATATATATAT+AGG - chr8_2:9277757-9277776 None:intergenic 5.0%
!!! ATTGTATTAAAATATTTTTT+TGG + chr8_2:9280068-9280087 Msa1232700:three_prime_UTR 5.0%
CGAAAGCTCTCTCCGAATAC+CGG - chr8_2:9273126-9273145 None:intergenic 50.0%
! GAGAGCTTTCGTTTTCGCGT+TGG + chr8_2:9273135-9273154 Msa1232700:CDS 50.0%
! GAAAGGATCGTGCCGATGAA+TGG + chr8_2:9273335-9273354 Msa1232700:CDS 50.0%
AGTCCTGAAAGGGGAACAGT+TGG + chr8_2:9273437-9273456 Msa1232700:CDS 50.0%
GGTGGTGACTCGTATGATTC+GGG + chr8_2:9273458-9273477 Msa1232700:CDS 50.0%
GTGGTGACTCGTATGATTCG+GGG + chr8_2:9273459-9273478 Msa1232700:CDS 50.0%
! TGGTGACTCGTATGATTCGG+GGG + chr8_2:9273460-9273479 Msa1232700:CDS 50.0%
GCTTCAGGGTAGAAGATCAG+CGG - chr8_2:9274497-9274516 None:intergenic 50.0%
TAGCTGTTCCAAGAGCAGTC+GGG - chr8_2:9274616-9274635 None:intergenic 50.0%
GACTGCTCTTGGAACAGCTA+TGG + chr8_2:9274616-9274635 Msa1232700:three_prime_UTR 50.0%
ATGGCTTCCTACAAGCTCAG+TGG + chr8_2:9275662-9275681 Msa1232700:intron 50.0%
! TGTAGGGTATCTTTGGGTGG+AGG + chr8_2:9275704-9275723 Msa1232700:intron 50.0%
! CTTTGGGTGGAGGATTTTGG+AGG + chr8_2:9275714-9275733 Msa1232700:intron 50.0%
!! TGGAGGATTTTGGAGGAGAG+TGG + chr8_2:9275721-9275740 Msa1232700:intron 50.0%
!! GGAGGATTTTGGAGGAGAGT+GGG + chr8_2:9275722-9275741 Msa1232700:intron 50.0%
!! GAGGATTTTGGAGGAGAGTG+GGG + chr8_2:9275723-9275742 Msa1232700:intron 50.0%
!! AGGATTTTGGAGGAGAGTGG+GGG + chr8_2:9275724-9275743 Msa1232700:intron 50.0%
! GTAAGGGTGTGCTTGGATAG+AGG - chr8_2:9275921-9275940 None:intergenic 50.0%
! CATGCCATATCGCTCTAGGT+AGG + chr8_2:9275983-9276002 Msa1232700:intron 50.0%
CTGTTATGTCTGGGTTTCGC+TGG + chr8_2:9276475-9276494 Msa1232700:three_prime_UTR 50.0%
AGGAAGAATTGAGCGGAGGA+GGG - chr8_2:9276659-9276678 None:intergenic 50.0%
CAACACAGTGTGCAGTTTGG+CGG - chr8_2:9276787-9276806 None:intergenic 50.0%
GCACAACACAGTGTGCAGTT+TGG - chr8_2:9276790-9276809 None:intergenic 50.0%
TTGGACCGTCCATACTTCAC+AGG + chr8_2:9276831-9276850 Msa1232700:three_prime_UTR 50.0%
GGCTACCTGTGAAGTATGGA+CGG - chr8_2:9276839-9276858 None:intergenic 50.0%
GCTATGTTTAACGGTGACGC+CGG + chr8_2:9277141-9277160 Msa1232700:three_prime_UTR 50.0%
ACTTCTATGCTTCGGCCTCA+AGG - chr8_2:9277173-9277192 None:intergenic 50.0%
GTCCGTATTAGGCCTTCTTC+TGG - chr8_2:9278157-9278176 None:intergenic 50.0%
TACGGACGGTAAATCGCATG+TGG + chr8_2:9278170-9278189 Msa1232700:intron 50.0%
TGTAGCTCCAGTAATGGCTG+TGG + chr8_2:9278539-9278558 Msa1232700:three_prime_UTR 50.0%
CCCTGCTATTGTGACTGTGA+CGG - chr8_2:9278873-9278892 None:intergenic 50.0%
CCGTCACAGTCACAATAGCA+GGG + chr8_2:9278870-9278889 Msa1232700:three_prime_UTR 50.0%
CGTCACAGTCACAATAGCAG+GGG + chr8_2:9278871-9278890 Msa1232700:three_prime_UTR 50.0%
TAAGGAGGCCGTCACCATAT+TGG + chr8_2:9278898-9278917 Msa1232700:three_prime_UTR 50.0%
ACGAGTAATAGGCCATCCAC+TGG - chr8_2:9278969-9278988 None:intergenic 50.0%
TGTCACCTGCATGAAGCTTC+TGG - chr8_2:9279306-9279325 None:intergenic 50.0%
GCTTCATGCAGGTGACAATG+TGG + chr8_2:9279309-9279328 Msa1232700:three_prime_UTR 50.0%
ATATGGCTAAGGCAAGTCCC+TGG - chr8_2:9279902-9279921 None:intergenic 50.0%
CCACCAACTGTTCCCCTTTC+AGG - chr8_2:9273443-9273462 None:intergenic 55.0%
CCTGAAAGGGGAACAGTTGG+TGG + chr8_2:9273440-9273459 Msa1232700:CDS 55.0%
! GGTGACTCGTATGATTCGGG+GGG + chr8_2:9273461-9273480 Msa1232700:CDS 55.0%
! TATGATTCGGGGGGTGGTGT+TGG + chr8_2:9273470-9273489 Msa1232700:CDS 55.0%
GCAGTCGGGACAACTGTGAA+AGG - chr8_2:9274602-9274621 None:intergenic 55.0%
ACAGTTGTCCCGACTGCTCT+TGG + chr8_2:9274605-9274624 Msa1232700:three_prime_UTR 55.0%
GAGCTTGTAGGAAGCCATGC+TGG - chr8_2:9275660-9275679 None:intergenic 55.0%
!! GGATTTTGGAGGAGAGTGGG+GGG + chr8_2:9275725-9275744 Msa1232700:intron 55.0%
GAGGAAGAATTGAGCGGAGG+AGG - chr8_2:9276660-9276679 None:intergenic 55.0%
GGGGAGGAAGATAGGGTTGA+TGG - chr8_2:9276725-9276744 None:intergenic 55.0%
TTCGGCCTCAAGGTTGTAGC+CGG - chr8_2:9277163-9277182 None:intergenic 55.0%
GCCGTCACAGTCACAATAGC+AGG + chr8_2:9278869-9278888 Msa1232700:three_prime_UTR 55.0%
AGAATGTAAGGGGAGGGGGT+AGG - chr8_2:9280253-9280272 None:intergenic 55.0%
! GACTCGTATGATTCGGGGGG+TGG + chr8_2:9273464-9273483 Msa1232700:CDS 60.0%
! TGACGCCGGCTACAACCTTG+AGG + chr8_2:9277155-9277174 Msa1232700:three_prime_UTR 60.0%
GCGGTTGCCACAGCCATTAC+TGG - chr8_2:9278549-9278568 None:intergenic 60.0%
ATGTAAGGGGAGGGGGTAGG+AGG - chr8_2:9280250-9280269 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 9273041 9280304 9273041 ID=Msa1232700;Name=Msa1232700
chr8_2 mRNA 9273041 9280304 9273041 ID=Msa1232700-mRNA-1;Parent=Msa1232700;Name=Msa1232700-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.88|0.9|1|0.77|0.7|10|2293|175
chr8_2 exon 9273041 9273567 9273041 ID=Msa1232700-mRNA-1:exon:3605;Parent=Msa1232700-mRNA-1
chr8_2 exon 9274589 9274694 9274589 ID=Msa1232700-mRNA-1:exon:3606;Parent=Msa1232700-mRNA-1
chr8_2 exon 9274846 9274895 9274846 ID=Msa1232700-mRNA-1:exon:3607;Parent=Msa1232700-mRNA-1
chr8_2 exon 9275504 9275571 9275504 ID=Msa1232700-mRNA-1:exon:3608;Parent=Msa1232700-mRNA-1
chr8_2 exon 9276421 9277531 9276421 ID=Msa1232700-mRNA-1:exon:3609;Parent=Msa1232700-mRNA-1
chr8_2 exon 9278508 9278692 9278508 ID=Msa1232700-mRNA-1:exon:3610;Parent=Msa1232700-mRNA-1
chr8_2 exon 9278833 9278919 9278833 ID=Msa1232700-mRNA-1:exon:3611;Parent=Msa1232700-mRNA-1
chr8_2 exon 9279080 9279174 9279080 ID=Msa1232700-mRNA-1:exon:3612;Parent=Msa1232700-mRNA-1
chr8_2 exon 9279300 9279442 9279300 ID=Msa1232700-mRNA-1:exon:3613;Parent=Msa1232700-mRNA-1
chr8_2 exon 9279856 9280304 9279856 ID=Msa1232700-mRNA-1:exon:3614;Parent=Msa1232700-mRNA-1
chr8_2 CDS 9273041 9273567 9273041 ID=Msa1232700-mRNA-1:cds;Parent=Msa1232700-mRNA-1
chr8_2 CDS 9274589 9274589 9274589 ID=Msa1232700-mRNA-1:cds;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9274590 9274694 9274590 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9274846 9274895 9274846 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9275504 9275571 9275504 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9276421 9277531 9276421 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9278508 9278692 9278508 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9278833 9278919 9278833 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9279080 9279174 9279080 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9279300 9279442 9279300 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
chr8_2 three_prime_UTR 9279856 9280304 9279856 ID=Msa1232700-mRNA-1:three_prime_utr;Parent=Msa1232700-mRNA-1
Gene Sequence

>Msa1232700

ATGGTACACATTGAATTAGATTCAGAGAGTTGTAGCTTTAAAGGGATTGCTATTGATGATTTTGATAGTGGAAGTTCAGGATCCGGTATTCGGAGAGAGCTTTCGTTTTCGCGTTGGTGTGACGACGATGATAATGATGGTGGTGATGGAAGGGTGATTTTGGATCAGAAATTAGGTGATGAGGATGTTATTGTAGAAGAAGACGCCGTTTTTGAGTTGCCTTTTGTTGAAAAGAATGAGGTGCAAGGAAGAGTTTTAGATAGGGAGAGATTTTCTTTTGATAAGTTTCGGAAGGAAAGGATCGTGCCGATGAATGGTGCTAGTACGATGGACGATGATTCTGTTTATAGGAGAGGTAATGGATCTGAGAAGTATGTGCCTTTTGATATTGAAGACAGTCCTGAAAGGGGAACAGTTGGTGGTGACTCGTATGATTCGGGGGGTGGTGTTGGATCACTGCATAAAAGCTCTGAAAATACTGTTCCTGTAGCAAATATCTTGAAGACTATGTTTTTCATATTTGTGTGA
Protein sequence

>Msa1232700

MVHIELDSESCSFKGIAIDDFDSGSSGSGIRRELSFSRWCDDDDNDGGDGRVILDQKLGDEDVIVEEDAVFELPFVEKNEVQGRVLDRERFSFDKFRKERIVPMNGASTMDDDSVYRRGNGSEKYVPFDIEDSPERGTVGGDSYDSGGGVGSLHKSSENTVPVANILKTMFFIFV*