AlfalfaGEDB | Msa0799970

M. sativa cultivar zhongmu-4 / Msa0799970

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799970	PNY11667.1	99.091	110	1	0	1	110	288	397	6.31e-70	224

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799970	sp\|Q9LFS4\|NIK1_ARATH	79.310	116	18	3	1	110	523	638	1.74e-54	182

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799970	A0A2K3P8S0	99.091	110	1	0	1	110	288	397	3.01e-70	224

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000050	Msa0799970	0.848262	6.856473e-60	-8.615850e-47
Msa0001960	Msa0799970	0.802779	4.771546e-49	-8.615850e-47
Msa0002580	Msa0799970	0.810841	9.432192e-51	-8.615850e-47
Msa0017930	Msa0799970	0.800662	1.297389e-48	-8.615850e-47
Msa0042640	Msa0799970	0.800111	1.679559e-48	-8.615850e-47
Msa0074600	Msa0799970	0.813861	2.065548e-51	-8.615850e-47
Msa0081020	Msa0799970	0.820704	5.960063e-53	-8.615850e-47
Msa0081090	Msa0799970	0.805187	1.506553e-49	-8.615850e-47
Msa0611210	Msa0799970	0.815291	9.966038e-52	-8.615850e-47
Msa0626450	Msa0799970	0.802316	5.945304e-49	-8.615850e-47
Msa0651550	Msa0799970	0.809594	1.752131e-50	-8.615850e-47
Msa0664600	Msa0799970	0.802282	6.041925e-49	-8.615850e-47
Msa0674480	Msa0799970	0.814182	1.754728e-51	-8.615850e-47
Msa0693890	Msa0799970	0.819702	1.010952e-52	-8.615850e-47
Msa0729150	Msa0799970	0.836044	1.178424e-56	-8.615850e-47
Msa0729270	Msa0799970	0.845224	4.640243e-59	-8.615850e-47
Msa0741220	Msa0799970	0.809138	2.194196e-50	-8.615850e-47
Msa0756990	Msa0799970	0.801511	8.699731e-49	-8.615850e-47
Msa0769690	Msa0799970	0.907459	4.954397e-81	-8.615850e-47
Msa0799970	Msa0833530	0.817928	2.556844e-52	-8.615850e-47
Msa0799970	Msa0935820	0.842726	2.169027e-58	-8.615850e-47
Msa0799970	Msa1004800	0.800076	1.707373e-48	-8.615850e-47
Msa0799970	Msa1021590	0.802539	5.347951e-49	-8.615850e-47
Msa0799970	Msa1023500	0.809713	1.651283e-50	-8.615850e-47
Msa0799970	Msa1023570	0.813699	2.242335e-51	-8.615850e-47
Msa0799970	Msa1035540	0.808493	3.014087e-50	-8.615850e-47
Msa0799970	Msa1044680	0.810410	1.168903e-50	-8.615850e-47
Msa0799970	Msa1096960	0.805421	1.345581e-49	-8.615850e-47
Msa0799970	Msa1101090	0.802813	4.694526e-49	-8.615850e-47
Msa0799970	Msa1232700	0.805659	1.199431e-49	-8.615850e-47
Msa0799970	Msa1265650	0.809959	1.462407e-50	-8.615850e-47
Msa0799970	Msa1297230	0.821526	3.852569e-53	-8.615850e-47
Msa0799970	Msa1300830	0.804695	1.909529e-49	-8.615850e-47
Msa0799970	Msa1303560	0.810033	1.409389e-50	-8.615850e-47
Msa0799970	Msa1303650	0.813044	3.124347e-51	-8.615850e-47
Msa0799970	Msa1316450	0.817602	3.029125e-52	-8.615850e-47
Msa0799970	Msa1355450	0.809382	1.945673e-50	-8.615850e-47
Msa0799970	Msa1372040	0.812886	3.382883e-51	-8.615850e-47
Msa0799970	Msa1382300	0.817352	3.447218e-52	-8.615850e-47
Msa0799970	Msa1415540	0.809376	1.950880e-50	-8.615850e-47
Msa0799970	Msa1427100	0.842715	2.183207e-58	-8.615850e-47
Msa0799970	Msa1433810	0.801414	9.106806e-49	-8.615850e-47
Msa0799970	Msa1434220	0.801683	8.019055e-49	-8.615850e-47
Msa0126040	Msa0799970	0.800146	1.652595e-48	-8.615850e-47
Msa0216840	Msa0799970	-0.800149	1.649966e-48	-8.615850e-47
Msa0225100	Msa0799970	0.800958	1.128745e-48	-8.615850e-47
Msa0231200	Msa0799970	0.801365	9.320466e-49	-8.615850e-47
Msa0369790	Msa0799970	0.813266	2.792800e-51	-8.615850e-47
Msa0425170	Msa0799970	0.800160	1.641841e-48	-8.615850e-47
Msa0434290	Msa0799970	0.823253	1.530172e-53	-8.615850e-47
Msa0436910	Msa0799970	0.818257	2.154049e-52	-8.615850e-47
Msa0464000	Msa0799970	0.811558	6.593697e-51	-8.615850e-47
Msa0472950	Msa0799970	0.811172	7.995604e-51	-8.615850e-47
Msa0244640	Msa0799970	0.854338	1.315725e-61	-8.615850e-47
Msa0266180	Msa0799970	0.802288	6.024627e-49	-8.615850e-47
Msa0283330	Msa0799970	0.821914	3.134318e-53	-8.615850e-47
Msa0287740	Msa0799970	0.804601	1.997908e-49	-8.615850e-47
Msa0290720	Msa0799970	0.804935	1.700899e-49	-8.615850e-47
Msa0321620	Msa0799970	0.811663	6.255469e-51	-8.615850e-47
Msa0323270	Msa0799970	0.805973	1.030583e-49	-8.615850e-47
Msa0330860	Msa0799970	0.802064	6.699517e-49	-8.615850e-47
Msa0349210	Msa0799970	0.800914	1.152282e-48	-8.615850e-47
Msa0509550	Msa0799970	0.801736	7.823377e-49	-8.615850e-47
Msa0519750	Msa0799970	0.852144	5.595456e-61	-8.615850e-47
Msa0519820	Msa0799970	0.830427	2.954312e-55	-8.615850e-47
Msa0519830	Msa0799970	0.844617	6.767883e-59	-8.615850e-47
Msa0528570	Msa0799970	0.823163	1.605518e-53	-8.615850e-47
Msa0557460	Msa0799970	0.803686	3.096763e-49	-8.615850e-47
Msa0575320	Msa0799970	0.823348	1.453516e-53	-8.615850e-47
Msa0597270	Msa0799970	0.802147	6.440324e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799970	MtrunA17_Chr0c03g0490031	100.000	110	0	0	1	110	512	621	9.18e-73	227
Msa0799970	MtrunA17_Chr6g0456231	83.784	111	17	1	1	110	515	625	3.53e-60	194
Msa0799970	MtrunA17_Chr7g0220741	78.182	110	24	0	1	110	517	626	4.28e-56	183
Msa0799970	MtrunA17_Chr5g0413291	67.273	110	35	1	1	110	517	625	1.72e-45	154
Msa0799970	MtrunA17_Chr4g0073471	49.630	135	43	2	1	110	506	640	2.48e-34	124
Msa0799970	MtrunA17_Chr2g0278871	53.153	111	51	1	1	110	510	620	1.71e-30	113
Msa0799970	MtrunA17_Chr1g0200911	53.636	110	49	2	1	110	520	627	1.61e-29	110
Msa0799970	MtrunA17_Chr2g0278831	51.351	111	53	1	1	110	509	619	2.85e-27	104
Msa0799970	MtrunA17_Chr2g0278861	51.376	109	52	1	3	110	507	615	1.06e-26	102
Msa0799970	MtrunA17_Chr3g0123891	50.000	110	53	1	1	110	502	609	2.24e-26	101
Msa0799970	MtrunA17_Chr2g0284101	46.552	116	50	3	1	110	513	622	2.83e-26	101
Msa0799970	MtrunA17_Chr2g0278851	62.667	75	28	0	1	75	486	560	3.11e-25	98.6
Msa0799970	MtrunA17_Chr2g0278891	45.736	129	49	3	3	110	514	642	2.98e-24	95.9
Msa0799970	MtrunA17_Chr8g0382101	46.364	110	57	1	1	110	499	606	1.31e-23	94.0
Msa0799970	MtrunA17_Chr8g0385051	41.818	110	63	1	1	110	489	597	7.83e-19	80.1
Msa0799970	MtrunA17_Chr2g0314881	44.776	67	37	0	1	67	442	508	6.39e-12	60.5
Msa0799970	MtrunA17_Chr2g0314821	38.043	92	50	2	1	90	877	963	1.91e-11	59.3
Msa0799970	MtrunA17_Chr2g0314841	41.791	67	39	0	1	67	874	940	4.54e-11	58.2
Msa0799970	MtrunA17_Chr8g0358821	41.935	62	35	1	1	62	900	960	4.77e-11	58.2
Msa0799970	MtrunA17_Chr8g0359641	42.623	61	35	0	1	61	880	940	6.96e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799970	AT5G16000.1	79.310	116	18	3	1	110	523	638	1.77e-55	182
Msa0799970	AT3G25560.1	78.761	113	21	2	1	110	523	635	6.62e-55	180
Msa0799970	AT3G25560.2	78.761	113	21	2	1	110	524	636	7.59e-55	180
Msa0799970	AT3G25560.3	78.378	111	21	2	1	108	523	633	9.05e-53	175
Msa0799970	AT1G60800.2	61.538	117	38	2	1	110	449	565	3.90e-42	145
Msa0799970	AT1G60800.1	61.538	117	38	2	1	110	516	632	9.03e-42	145
Msa0799970	AT2G23950.1	52.000	125	45	2	1	110	510	634	1.61e-35	127
Msa0799970	AT4G30520.1	45.926	135	48	2	1	110	514	648	4.81e-31	115
Msa0799970	AT1G34210.1	57.273	110	45	2	1	110	521	628	1.02e-30	114
Msa0799970	AT1G34210.2	57.273	110	45	2	1	110	521	628	1.02e-30	114
Msa0799970	AT1G71830.1	55.455	110	47	2	1	110	518	625	3.36e-30	112
Msa0799970	AT5G10290.1	50.000	110	53	1	1	110	506	613	3.88e-26	101
Msa0799970	AT5G10290.2	50.000	110	53	1	1	110	506	613	3.88e-26	101
Msa0799970	AT4G33430.1	49.550	111	55	1	1	110	505	615	7.40e-26	100
Msa0799970	AT4G33430.2	49.550	111	55	1	1	110	552	662	8.62e-26	100
Msa0799970	AT5G65240.1	50.000	110	53	1	1	110	500	607	1.65e-24	96.7
Msa0799970	AT2G13800.4	47.748	111	57	1	1	110	374	484	8.60e-24	94.7
Msa0799970	AT2G13800.2	47.748	111	57	1	1	110	374	484	8.60e-24	94.7
Msa0799970	AT2G13790.1	58.667	75	31	0	1	75	510	584	9.14e-24	94.7
Msa0799970	AT2G13800.3	58.667	75	31	0	1	75	491	565	1.02e-23	94.7
Msa0799970	AT2G13800.1	58.667	75	31	0	1	75	491	565	1.02e-23	94.7
Msa0799970	AT5G65240.2	50.515	97	46	1	1	97	500	594	3.77e-22	90.1
Msa0799970	AT5G45780.2	40.909	110	56	2	1	110	471	571	2.68e-21	87.8
Msa0799970	AT5G45780.1	40.909	110	56	2	1	110	514	614	2.97e-21	87.4
Msa0799970	AT5G63710.3	49.367	79	38	2	3	80	508	585	2.46e-16	73.6
Msa0799970	AT5G63710.1	49.367	79	38	2	3	80	507	584	2.90e-16	73.2
Msa0799970	AT5G63710.2	49.367	79	38	2	3	80	472	549	6.03e-16	72.4
Msa0799970	AT5G63710.4	49.367	79	38	2	3	80	472	549	6.03e-16	72.4
Msa0799970	AT1G53420.1	31.193	109	72	2	1	107	837	944	9.84e-13	63.2

Find 82 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAAAGCATTTCAGGAAAT+TGG	0.089554	5_3:-13402834	None:intergenic
CTTCTGCTTGAATTGATTTC+TGG	0.104578	5_3:+13404403	Msa0799970:five_prime_UTR
GGACAAAGAGCTCTTGAATT+TGG	0.159440	5_3:+13404424	Msa0799970:five_prime_UTR
CTGCATCTGCTTACTGATTC+TGG	0.179428	5_3:+13402923	Msa0799970:five_prime_UTR
TCAGAGAAAACAGATGTATT+TGG	0.218741	5_3:+13404370	Msa0799970:five_prime_UTR
TAAATCTTGAAAAGCATTTC+AGG	0.225262	5_3:-13402841	None:intergenic
GCACAAGCAATGGAACTTTC+TGG	0.232145	5_3:+13405401	Msa0799970:CDS
TGTCCTGTTGATAGGTATTC+AGG	0.232790	5_3:-13404343	None:intergenic
ACATCTCTGTGAATTATCTT+TGG	0.250578	5_3:-13404190	None:intergenic
GTTAGTATTAAATCCTTAAT+AGG	0.250611	5_3:+13402669	Msa0799970:five_prime_UTR
AATCAAGCATAGCTCCTTTC+TGG	0.266807	5_3:-13404459	None:intergenic
TGGGATTTGGCTTCCTTCTC+TGG	0.269125	5_3:+13402943	Msa0799970:five_prime_UTR
AAAACAGATGTATTTGGATT+TGG	0.270639	5_3:+13404376	Msa0799970:five_prime_UTR
TGCTTACTGATTCTGGGATT+TGG	0.272281	5_3:+13402930	Msa0799970:five_prime_UTR
CTCTGAAATGAAACTTCTTC+AGG	0.277474	5_3:-13403131	None:intergenic
AATACTAACAAATAAATATA+GGG	0.287986	5_3:-13402655	None:intergenic
GATCTCACATATGCCTATTA+AGG	0.296419	5_3:-13402682	None:intergenic
TAATACTAACAAATAAATAT+AGG	0.301722	5_3:-13402656	None:intergenic
GACAAAGAGCTCTTGAATTT+GGG	0.318813	5_3:+13404425	Msa0799970:five_prime_UTR
CTTTGGATTAGCAAAACTAT+TGG	0.326220	5_3:+13404264	Msa0799970:five_prime_UTR
GAAATTGGGTTAGGCGTGTT+TGG	0.332055	5_3:-13402819	None:intergenic
GTACAGTTATAGCGGTAAAA+AGG	0.343643	5_3:+13403244	Msa0799970:five_prime_UTR
TTAGTTGGAAAAGGTGGTTT+TGG	0.349122	5_3:+13403192	Msa0799970:five_prime_UTR
CAAGACATTATATGTTATCT+TGG	0.356871	5_3:-13405425	None:intergenic
GAAAAGCATTTCAGGAAATT+GGG	0.357902	5_3:-13402833	None:intergenic
CTGACGTATAGATGTTTGTT+TGG	0.360385	5_3:+13405519	Msa0799970:three_prime_UTR
CTGAGGATTGTCCTGTTGAT+AGG	0.366776	5_3:-13404351	None:intergenic
GAGATGGACTTGCAGAGAAA+TGG	0.368699	5_3:+13405282	Msa0799970:CDS
AGAAAGGAGCTATGCTTGAT+TGG	0.378437	5_3:+13404461	Msa0799970:exon
TGCATCTGCTTACTGATTCT+GGG	0.387469	5_3:+13402924	Msa0799970:five_prime_UTR
CAGCCAAGCCAGGTCTAGAC+TGG	0.394685	5_3:+13404101	Msa0799970:intron
CTTGTTGCCCAGTCTAGACC+TGG	0.415335	5_3:-13404109	None:intergenic
GCATTTCAGGAAATTGGGTT+AGG	0.444765	5_3:-13402828	None:intergenic
TGCCCAGTCTAGACCTGGCT+TGG	0.446027	5_3:-13404104	None:intergenic
TTCTTTGCTTGCACAAGCAA+TGG	0.448964	5_3:+13405391	Msa0799970:CDS
GCCCCTGAATACCTATCAAC+AGG	0.450299	5_3:+13404340	Msa0799970:five_prime_UTR
GATTATTGTGAGGCTGTAGT+AGG	0.451685	5_3:+13404238	Msa0799970:five_prime_UTR
TTATGGGAAATGTTCATTCA+AGG	0.454490	5_3:+13405575	Msa0799970:three_prime_UTR
AGATGGACTTGCAGAGAAAT+GGG	0.458366	5_3:+13405283	Msa0799970:CDS
GAGGCTGTAGTAGGAGACTT+TGG	0.467924	5_3:+13404247	Msa0799970:five_prime_UTR
AATATAGGGGTGGTCAATGA+TGG	0.473405	5_3:-13402641	None:intergenic
AAAATATTGAATGCATAGTA+AGG	0.476442	5_3:+13405737	Msa0799970:three_prime_UTR
GTCCTGTTGATAGGTATTCA+GGG	0.478488	5_3:-13404342	None:intergenic
TGATATATTGCAGCCAAGCC+AGG	0.482112	5_3:+13404091	Msa0799970:intron
GAAGTAGTTAGAATGCTTGA+AGG	0.484974	5_3:+13405260	Msa0799970:CDS
ACAAGGAAGAGAATAGCATT+AGG	0.487235	5_3:+13404127	Msa0799970:five_prime_UTR
TAGGCATATGTGAGATCGCT+CGG	0.492597	5_3:+13402688	Msa0799970:five_prime_UTR
CAAATATTCTTTGACACGAA+TGG	0.493070	5_3:+13402987	Msa0799970:five_prime_UTR
ATCTTTGTCTCCACCAGAGA+AGG	0.501138	5_3:-13402956	None:intergenic
GAAAGGAGCTATGCTTGATT+GGG	0.501539	5_3:+13404462	Msa0799970:exon
GAAACTTCTTCAGGTTTCCA+AGG	0.502259	5_3:-13403122	None:intergenic
TATTGAATGCATAGTAAGGC+AGG	0.502269	5_3:+13405741	Msa0799970:three_prime_UTR
TACCGCGAAGAGATTTGCCT+TGG	0.502312	5_3:+13403105	Msa0799970:five_prime_UTR
GAAATGTTCATTCAAGGTGT+TGG	0.504308	5_3:+13405581	Msa0799970:three_prime_UTR
GTTAGAATGCTTGAAGGAGA+TGG	0.517850	5_3:+13405266	Msa0799970:CDS
GATTTGGCTTCCTTCTCTGG+TGG	0.524641	5_3:+13402946	Msa0799970:five_prime_UTR
ATAGCATTAGGAGCAGGAAG+AGG	0.527119	5_3:+13404139	Msa0799970:five_prime_UTR
ATTATAATACAATATAATCA+TGG	0.536970	5_3:-13405709	None:intergenic
GGGAAAGCTGCTAACCAGAA+AGG	0.551293	5_3:+13404445	Msa0799970:five_prime_UTR
CTCAGTACCTTCCAAGTCAC+AGG	0.553116	5_3:+13405225	Msa0799970:CDS
AAGAGAATAGCATTAGGAGC+AGG	0.554035	5_3:+13404133	Msa0799970:five_prime_UTR
GCTGAATCAACAAGAAGTAG+AGG	0.555358	5_3:+13405320	Msa0799970:CDS
TTCCAAGGCAAATCTCTTCG+CGG	0.555740	5_3:-13403107	None:intergenic
GTTAGATGAAATAGTTCAAG+TGG	0.557246	5_3:+13405190	Msa0799970:CDS
TTTGATCAACTATGGAGGGA+TGG	0.558575	5_3:+13405549	Msa0799970:three_prime_UTR
TAAGCTTGAAGCAAAAGCTA+AGG	0.563446	5_3:-13402898	None:intergenic
TTGACTGTACAGAATCTGAT+CGG	0.568637	5_3:+13405491	Msa0799970:three_prime_UTR
TAGCATTAGGAGCAGGAAGA+GGG	0.575178	5_3:+13404140	Msa0799970:five_prime_UTR
GATTGACGTGTTAGTTGACA+AGG	0.577634	5_3:+13405139	Msa0799970:CDS
TACAGTTCCTCTCACTGCTG+TGG	0.582490	5_3:-13404308	None:intergenic
CAGGTCTAGACTGGGCAACA+AGG	0.598078	5_3:+13404110	Msa0799970:five_prime_UTR
AGGCATATGTGAGATCGCTC+GGG	0.603366	5_3:+13402689	Msa0799970:five_prime_UTR
TACAAAGGTTGTCTCCGAGA+TGG	0.605223	5_3:+13403222	Msa0799970:five_prime_UTR
CCGCTATAACTGTACCATCT+CGG	0.608828	5_3:-13403236	None:intergenic
ATACTAACAAATAAATATAG+GGG	0.610406	5_3:-13402654	None:intergenic
TCCTGTTGATAGGTATTCAG+GGG	0.615112	5_3:-13404341	None:intergenic
AGCCAAGCCAGGTCTAGACT+GGG	0.630637	5_3:+13404102	Msa0799970:intron
CATGTGACCACAGCAGTGAG+AGG	0.643999	5_3:+13404301	Msa0799970:five_prime_UTR
CCGAGATGGTACAGTTATAG+CGG	0.656514	5_3:+13403236	Msa0799970:five_prime_UTR
ACAGCAGTGAGAGGAACTGT+AGG	0.666580	5_3:+13404310	Msa0799970:five_prime_UTR
CTAACAAATAAATATAGGGG+TGG	0.667828	5_3:-13402651	None:intergenic
ATTGCTAGATGATTATTGTG+AGG	0.718567	5_3:+13404228	Msa0799970:five_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATACTAACAAATAAATATA+GGG	-	chr5_3:13402658-13402677	None:intergenic	10.0%
!!	TAATACTAACAAATAAATAT+AGG	-	chr5_3:13402659-13402678	None:intergenic	10.0%
!!!	TTTTATTGTTAGTATAAAAA+GGG	-	chr5_3:13404903-13404922	None:intergenic	10.0%
!!	ATTAATATATAGTATATGTT+GGG	-	chr5_3:13404978-13404997	None:intergenic	10.0%
!!	TATTAATATATAGTATATGT+TGG	-	chr5_3:13404979-13404998	None:intergenic	10.0%
!!	ATTATAATACAATATAATCA+TGG	-	chr5_3:13405712-13405731	None:intergenic	10.0%
!!	ATACTAACAAATAAATATAG+GGG	-	chr5_3:13402657-13402676	None:intergenic	15.0%
!!!	AGTTTTACTTTTATGTAAAT+TGG	-	chr5_3:13403784-13403803	None:intergenic	15.0%
!!	ATAAAAAAACTTTAATGATG+TGG	+	chr5_3:13403933-13403952	Msa0799970:intron	15.0%
!!!	TTTATGTAAATTTTGAACTA+GGG	-	chr5_3:13403991-13404010	None:intergenic	15.0%
!!!	TTTTATGTAAATTTTGAACT+AGG	-	chr5_3:13403992-13404011	None:intergenic	15.0%
!!	AATTTACATAAAAACCAAAT+AGG	+	chr5_3:13403999-13404018	Msa0799970:intron	15.0%
!!!	CTTTTATTGTTAGTATAAAA+AGG	-	chr5_3:13404904-13404923	None:intergenic	15.0%
!!	GTTAGTATTAAATCCTTAAT+AGG	+	chr5_3:13402669-13402688	Msa0799970:five_prime_UTR	20.0%
!!	AACAATTATCAACAATGTAA+AGG	-	chr5_3:13403659-13403678	None:intergenic	20.0%
!!	CATAAAAGTAAAACTACAAT+TGG	+	chr5_3:13403789-13403808	Msa0799970:intron	20.0%
!!	ATTTATATTGCCAAGAATTA+TGG	+	chr5_3:13403857-13403876	Msa0799970:intron	20.0%
!!	CACATAAGATATATATAACA+TGG	-	chr5_3:13405052-13405071	None:intergenic	20.0%
!!!	AAAAACTGTTGATCTTATTT+TGG	+	chr5_3:13405630-13405649	Msa0799970:three_prime_UTR	20.0%
!!	AAAATATTGAATGCATAGTA+AGG	+	chr5_3:13405737-13405756	Msa0799970:three_prime_UTR	20.0%
!!!	ATTTTGACTTTCTTTCATGA+TGG	+	chr5_3:13402514-13402533	Msa0799970:five_prime_UTR	25.0%
!!!	TAAATCTTGAAAAGCATTTC+AGG	-	chr5_3:13402844-13402863	None:intergenic	25.0%
!!!	ATCAATGTTTTTGATGATTG+TGG	+	chr5_3:13403569-13403588	Msa0799970:intron	25.0%
!!	ACGTTTTTATACACATGAAA+TGG	+	chr5_3:13403592-13403611	Msa0799970:intron	25.0%
!!	ACGTTTTTAAATTACAGTTG+TGG	+	chr5_3:13403615-13403634	Msa0799970:intron	25.0%
!!	TTTTTAAATTACAGTTGTGG+TGG	+	chr5_3:13403618-13403637	Msa0799970:intron	25.0%
!	ATTATCAACAATGTAAAGGA+TGG	-	chr5_3:13403655-13403674	None:intergenic	25.0%
!!!	AGACCTTTTTTTAAAATCCT+TGG	+	chr5_3:13403756-13403775	Msa0799970:intron	25.0%
!!!	GAACCAAGGATTTTAAAAAA+AGG	-	chr5_3:13403762-13403781	None:intergenic	25.0%
!!	TTTTATGTAAATTGGAACCA+AGG	-	chr5_3:13403776-13403795	None:intergenic	25.0%
!!	TGTTATTTGACCATAATTCT+TGG	-	chr5_3:13403870-13403889	None:intergenic	25.0%
!	AGAATTATGGTCAAATAACA+AGG	+	chr5_3:13403870-13403889	Msa0799970:intron	25.0%
!!!	TGAACTAGGGTTTTATAAAA+GGG	-	chr5_3:13403978-13403997	None:intergenic	25.0%
!!!	TTGAACTAGGGTTTTATAAA+AGG	-	chr5_3:13403979-13403998	None:intergenic	25.0%
!!	TTATCAACACTTTTCCTATT+TGG	-	chr5_3:13404016-13404035	None:intergenic	25.0%
!	TAGTACTCATACTATATCTT+TGG	-	chr5_3:13404058-13404077	None:intergenic	25.0%
!	AAAACAGATGTATTTGGATT+TGG	+	chr5_3:13404376-13404395	Msa0799970:five_prime_UTR	25.0%
!	CAAAAAGACAACAAAGTAAA+AGG	-	chr5_3:13404516-13404535	None:intergenic	25.0%
!!!	TTACTTTTATTTCTGTCACT+AGG	+	chr5_3:13405005-13405024	Msa0799970:intron	25.0%
!	ACTTGAAAAACAAGTATGAT+AGG	+	chr5_3:13405162-13405181	Msa0799970:CDS	25.0%
!	CAAGACATTATATGTTATCT+TGG	-	chr5_3:13405428-13405447	None:intergenic	25.0%
!!!	TATTTTGGAATTTGTTTCAC+TGG	+	chr5_3:13405645-13405664	Msa0799970:three_prime_UTR	25.0%
!	AAGTCTAATCTAGTGCTTTT+TGG	+	chr5_3:13402540-13402559	Msa0799970:five_prime_UTR	30.0%
	CTAACAAATAAATATAGGGG+TGG	-	chr5_3:13402654-13402673	None:intergenic	30.0%
!!	GAAAAGCATTTCAGGAAATT+GGG	-	chr5_3:13402836-13402855	None:intergenic	30.0%
!!	TGAAAAGCATTTCAGGAAAT+TGG	-	chr5_3:13402837-13402856	None:intergenic	30.0%
	CAAATATTCTTTGACACGAA+TGG	+	chr5_3:13402987-13403006	Msa0799970:five_prime_UTR	30.0%
	ATCAAATTGAACTACAGCAT+AGG	+	chr5_3:13403025-13403044	Msa0799970:intron	30.0%
	AGCAAAAACTTAGTTGGAAA+AGG	+	chr5_3:13403183-13403202	Msa0799970:five_prime_UTR	30.0%
	AAAAACTTAGTTGGAAAAGG+TGG	+	chr5_3:13403186-13403205	Msa0799970:five_prime_UTR	30.0%
	GTATATCCTTATATGTCGAA+TGG	+	chr5_3:13403396-13403415	Msa0799970:intron	30.0%
!	TTGATAATTGTTGCCTAATG+TGG	+	chr5_3:13403667-13403686	Msa0799970:intron	30.0%
	AACAGTATTTGAGTAACCAA+AGG	+	chr5_3:13403830-13403849	Msa0799970:intron	30.0%
	GGCAATATAAATGATACCTT+TGG	-	chr5_3:13403849-13403868	None:intergenic	30.0%
	TATGGTCAAATAACAAGGAA+AGG	+	chr5_3:13403875-13403894	Msa0799970:intron	30.0%
	ATGGTCAAATAACAAGGAAA+GGG	+	chr5_3:13403876-13403895	Msa0799970:intron	30.0%
	ACATCTCTGTGAATTATCTT+TGG	-	chr5_3:13404193-13404212	None:intergenic	30.0%
	ATTGCTAGATGATTATTGTG+AGG	+	chr5_3:13404228-13404247	Msa0799970:five_prime_UTR	30.0%
!!	CTTTGGATTAGCAAAACTAT+TGG	+	chr5_3:13404264-13404283	Msa0799970:five_prime_UTR	30.0%
!	AAATACATCTGTTTTCTCTG+AGG	-	chr5_3:13404371-13404390	None:intergenic	30.0%
	TCAGAGAAAACAGATGTATT+TGG	+	chr5_3:13404370-13404389	Msa0799970:five_prime_UTR	30.0%
	TGGGTAAGTTTAAACAGAAT+TGG	+	chr5_3:13404481-13404500	Msa0799970:intron	30.0%
!!	GACAAATTGATTTGAAGTGT+TGG	-	chr5_3:13404579-13404598	None:intergenic	30.0%
	TTCAATGTGACTAAAATTGC+AGG	+	chr5_3:13405091-13405110	Msa0799970:intron	30.0%
	GTTAGATGAAATAGTTCAAG+TGG	+	chr5_3:13405190-13405209	Msa0799970:CDS	30.0%
!	CTAACTACTTCTGACATTTT+TGG	-	chr5_3:13405251-13405270	None:intergenic	30.0%
!!!	GTATGTGTTTTGATCAACTA+TGG	+	chr5_3:13405541-13405560	Msa0799970:three_prime_UTR	30.0%
	TTATGGGAAATGTTCATTCA+AGG	+	chr5_3:13405575-13405594	Msa0799970:three_prime_UTR	30.0%
	GATCTCACATATGCCTATTA+AGG	-	chr5_3:13402685-13402704	None:intergenic	35.0%
	TAAGCTTGAAGCAAAAGCTA+AGG	-	chr5_3:13402901-13402920	None:intergenic	35.0%
!!	CTCTGAAATGAAACTTCTTC+AGG	-	chr5_3:13403134-13403153	None:intergenic	35.0%
	TTCAGCAGCAAAAACTTAGT+TGG	+	chr5_3:13403177-13403196	Msa0799970:five_prime_UTR	35.0%
!	TTAGTTGGAAAAGGTGGTTT+TGG	+	chr5_3:13403192-13403211	Msa0799970:five_prime_UTR	35.0%
!	TAGTTGGAAAAGGTGGTTTT+GGG	+	chr5_3:13403193-13403212	Msa0799970:five_prime_UTR	35.0%
!!!	GGTTTTGGGAATGTTTACAA+AGG	+	chr5_3:13403207-13403226	Msa0799970:five_prime_UTR	35.0%
	GTACAGTTATAGCGGTAAAA+AGG	+	chr5_3:13403244-13403263	Msa0799970:five_prime_UTR	35.0%
!	CTTAAAGATGGTAATGCAGT+TGG	+	chr5_3:13403267-13403286	Msa0799970:intron	35.0%
!	TCTCTAGTTCAGTTTGGAAT+TGG	-	chr5_3:13403302-13403321	None:intergenic	35.0%
!	TGATCATCTCTAGTTCAGTT+TGG	-	chr5_3:13403308-13403327	None:intergenic	35.0%
	TGATCAGTTTAGCTGTTCAT+AGG	+	chr5_3:13403322-13403341	Msa0799970:intron	35.0%
	ACACTACCATTCGACATATA+AGG	-	chr5_3:13403405-13403424	None:intergenic	35.0%
	TTAAATTACAGTTGTGGTGG+AGG	+	chr5_3:13403621-13403640	Msa0799970:intron	35.0%
	TACAGAGCCATAACAAACTT+CGG	+	chr5_3:13403723-13403742	Msa0799970:intron	35.0%
	TGGTCAAATAACAAGGAAAG+GGG	+	chr5_3:13403877-13403896	Msa0799970:intron	35.0%
	AAACTTTAATGATGTGGCCT+AGG	+	chr5_3:13403939-13403958	Msa0799970:intron	35.0%
	ACAAGGAAGAGAATAGCATT+AGG	+	chr5_3:13404127-13404146	Msa0799970:five_prime_UTR	35.0%
!	CTTCTGCTTGAATTGATTTC+TGG	+	chr5_3:13404403-13404422	Msa0799970:five_prime_UTR	35.0%
	GACAAAGAGCTCTTGAATTT+GGG	+	chr5_3:13404425-13404444	Msa0799970:five_prime_UTR	35.0%
!!	AGAGCCACTTGTTCTAAAAT+AGG	+	chr5_3:13404617-13404636	Msa0799970:intron	35.0%
!!!	AGTGCCTATTTTAGAACAAG+TGG	-	chr5_3:13404624-13404643	None:intergenic	35.0%
	ACAGTCTCTTGTGTAAAAAC+AGG	+	chr5_3:13404797-13404816	Msa0799970:intron	35.0%
	CAGTCTCTTGTGTAAAAACA+GGG	+	chr5_3:13404798-13404817	Msa0799970:intron	35.0%
	TCTTGTGTAAAAACAGGGTA+AGG	+	chr5_3:13404803-13404822	Msa0799970:intron	35.0%
	CGTACAATACATCAAATGGT+GGG	+	chr5_3:13404829-13404848	Msa0799970:intron	35.0%
	TTAGTATAAAAAGGGCAACC+CGG	-	chr5_3:13404895-13404914	None:intergenic	35.0%
	GAAGTAGTTAGAATGCTTGA+AGG	+	chr5_3:13405260-13405279	Msa0799970:CDS	35.0%
	TTGACTGTACAGAATCTGAT+CGG	+	chr5_3:13405491-13405510	Msa0799970:three_prime_UTR	35.0%
	CTGACGTATAGATGTTTGTT+TGG	+	chr5_3:13405519-13405538	Msa0799970:three_prime_UTR	35.0%
!!!	TGTGTTTTGATCAACTATGG+AGG	+	chr5_3:13405544-13405563	Msa0799970:three_prime_UTR	35.0%
!!!	GTGTTTTGATCAACTATGGA+GGG	+	chr5_3:13405545-13405564	Msa0799970:three_prime_UTR	35.0%
!	TATGGAGGGATGGTTTTTAT+GGG	+	chr5_3:13405559-13405578	Msa0799970:three_prime_UTR	35.0%
	GAAATGTTCATTCAAGGTGT+TGG	+	chr5_3:13405581-13405600	Msa0799970:three_prime_UTR	35.0%
	TATTGAATGCATAGTAAGGC+AGG	+	chr5_3:13405741-13405760	Msa0799970:three_prime_UTR	35.0%
	AATATAGGGGTGGTCAATGA+TGG	-	chr5_3:13402644-13402663	None:intergenic	40.0%
	GCATTTCAGGAAATTGGGTT+AGG	-	chr5_3:13402831-13402850	None:intergenic	40.0%
!!!	GTGAGTTTTTGGTCGATTAG+AGG	-	chr5_3:13402871-13402890	None:intergenic	40.0%
!!	AAGGCAGCTTTGTGAGTTTT+TGG	-	chr5_3:13402882-13402901	None:intergenic	40.0%
!!	TGCATCTGCTTACTGATTCT+GGG	+	chr5_3:13402924-13402943	Msa0799970:five_prime_UTR	40.0%
!!	TGCTTACTGATTCTGGGATT+TGG	+	chr5_3:13402930-13402949	Msa0799970:five_prime_UTR	40.0%
!	GAAACTTCTTCAGGTTTCCA+AGG	-	chr5_3:13403125-13403144	None:intergenic	40.0%
	GCGGTAAAAAGGCTTAAAGA+TGG	+	chr5_3:13403255-13403274	Msa0799970:five_prime_UTR	40.0%
!	AAAGATGGTAATGCAGTTGG+TGG	+	chr5_3:13403270-13403289	Msa0799970:intron	40.0%
	CATTTCATGTGTATGACAGC+AGG	-	chr5_3:13403521-13403540	None:intergenic	40.0%
	CTGCTGTCATACACATGAAA+TGG	+	chr5_3:13403519-13403538	Msa0799970:intron	40.0%
	TCTCTACCATGGTCTAATAG+TGG	+	chr5_3:13403699-13403718	Msa0799970:intron	40.0%
	AAGAGAATAGCATTAGGAGC+AGG	+	chr5_3:13404133-13404152	Msa0799970:five_prime_UTR	40.0%
	GATTATTGTGAGGCTGTAGT+AGG	+	chr5_3:13404238-13404257	Msa0799970:five_prime_UTR	40.0%
!	TCCTGTTGATAGGTATTCAG+GGG	-	chr5_3:13404344-13404363	None:intergenic	40.0%
!	GTCCTGTTGATAGGTATTCA+GGG	-	chr5_3:13404345-13404364	None:intergenic	40.0%
!	TGTCCTGTTGATAGGTATTC+AGG	-	chr5_3:13404346-13404365	None:intergenic	40.0%
	GGACAAAGAGCTCTTGAATT+TGG	+	chr5_3:13404424-13404443	Msa0799970:five_prime_UTR	40.0%
	AATCAAGCATAGCTCCTTTC+TGG	-	chr5_3:13404462-13404481	None:intergenic	40.0%
	AGAAAGGAGCTATGCTTGAT+TGG	+	chr5_3:13404461-13404480	Msa0799970:exon	40.0%
	GAAAGGAGCTATGCTTGATT+GGG	+	chr5_3:13404462-13404481	Msa0799970:exon	40.0%
	ACACACACACACTAACAATG+AGG	+	chr5_3:13404679-13404698	Msa0799970:intron	40.0%
	CACACACACACTAACAATGA+GGG	+	chr5_3:13404680-13404699	Msa0799970:intron	40.0%
	ACACACACACTAACAATGAG+GGG	+	chr5_3:13404681-13404700	Msa0799970:intron	40.0%
	GTTGTTGTCAAGTGACTGTA+AGG	+	chr5_3:13404726-13404745	Msa0799970:intron	40.0%
	GCTGCGTACAATACATCAAA+TGG	+	chr5_3:13404825-13404844	Msa0799970:intron	40.0%
	GCGTACAATACATCAAATGG+TGG	+	chr5_3:13404828-13404847	Msa0799970:intron	40.0%
	GATTGACGTGTTAGTTGACA+AGG	+	chr5_3:13405139-13405158	Msa0799970:CDS	40.0%
	GTTAGAATGCTTGAAGGAGA+TGG	+	chr5_3:13405266-13405285	Msa0799970:CDS	40.0%
!	AGATGGACTTGCAGAGAAAT+GGG	+	chr5_3:13405283-13405302	Msa0799970:CDS	40.0%
	GCTGAATCAACAAGAAGTAG+AGG	+	chr5_3:13405320-13405339	Msa0799970:CDS	40.0%
	TTCTTTGCTTGCACAAGCAA+TGG	+	chr5_3:13405391-13405410	Msa0799970:CDS	40.0%
	TTTGATCAACTATGGAGGGA+TGG	+	chr5_3:13405549-13405568	Msa0799970:three_prime_UTR	40.0%
!	CTATGGAGGGATGGTTTTTA+TGG	+	chr5_3:13405558-13405577	Msa0799970:three_prime_UTR	40.0%
	TAGGCATATGTGAGATCGCT+CGG	+	chr5_3:13402688-13402707	Msa0799970:five_prime_UTR	45.0%
!	GAAATTGGGTTAGGCGTGTT+TGG	-	chr5_3:13402822-13402841	None:intergenic	45.0%
!!	CTGCATCTGCTTACTGATTC+TGG	+	chr5_3:13402923-13402942	Msa0799970:five_prime_UTR	45.0%
	ATCTTTGTCTCCACCAGAGA+AGG	-	chr5_3:13402959-13402978	None:intergenic	45.0%
	TTCCAAGGCAAATCTCTTCG+CGG	-	chr5_3:13403110-13403129	None:intergenic	45.0%
	TACAAAGGTTGTCTCCGAGA+TGG	+	chr5_3:13403222-13403241	Msa0799970:five_prime_UTR	45.0%
	CCGCTATAACTGTACCATCT+CGG	-	chr5_3:13403239-13403258	None:intergenic	45.0%
	CCGAGATGGTACAGTTATAG+CGG	+	chr5_3:13403236-13403255	Msa0799970:five_prime_UTR	45.0%
	AGGAATCTTCTTCGCCTCTA+CGG	+	chr5_3:13403342-13403361	Msa0799970:intron	45.0%
	CTGTCATGCAAAATCCGTAG+AGG	-	chr5_3:13403359-13403378	None:intergenic	45.0%
	TTTGCATGACAGCTACAGAG+AGG	+	chr5_3:13403367-13403386	Msa0799970:intron	45.0%
!!	AGTGTTGCTTCTCGTCTCAA+AGG	+	chr5_3:13403420-13403439	Msa0799970:intron	45.0%
	GTTGCCTAATGTGGATGATG+CGG	+	chr5_3:13403676-13403695	Msa0799970:intron	45.0%
	CTGTAGCCACTATTAGACCA+TGG	-	chr5_3:13403708-13403727	None:intergenic	45.0%
	GAGCCATAACAAACTTCGGT+CGG	+	chr5_3:13403727-13403746	Msa0799970:intron	45.0%
!!	ACTCCGACCGAAGTTTGTTA+TGG	-	chr5_3:13403733-13403752	None:intergenic	45.0%
	AATAACAAGGAAAGGGGCCT+CGG	+	chr5_3:13403883-13403902	Msa0799970:intron	45.0%
	TGATATATTGCAGCCAAGCC+AGG	+	chr5_3:13404091-13404110	Msa0799970:intron	45.0%
	ATAGCATTAGGAGCAGGAAG+AGG	+	chr5_3:13404139-13404158	Msa0799970:five_prime_UTR	45.0%
	TAGCATTAGGAGCAGGAAGA+GGG	+	chr5_3:13404140-13404159	Msa0799970:five_prime_UTR	45.0%
	CTGAGGATTGTCCTGTTGAT+AGG	-	chr5_3:13404354-13404373	None:intergenic	45.0%
	CTAACAATGAGGGGTAACCT+TGG	+	chr5_3:13404690-13404709	Msa0799970:intron	45.0%
	CAACTTTACCAGTTGCACCA+AGG	-	chr5_3:13404710-13404729	None:intergenic	45.0%
	GTCAAGTGACTGTAAGGTCA+CGG	+	chr5_3:13404732-13404751	Msa0799970:intron	45.0%
	TCAAGTGACTGTAAGGTCAC+GGG	+	chr5_3:13404733-13404752	Msa0799970:intron	45.0%
	GTCAAGTGACTGTAAGGTCA+CGG	+	chr5_3:13404732-13404751	Msa0799970:intron	45.0%
	TCAAGTGACTGTAAGGTCAC+GGG	+	chr5_3:13404733-13404752	Msa0799970:intron	45.0%
!!	TTTTTGGCCTGTGACTTGGA+AGG	-	chr5_3:13405235-13405254	None:intergenic	45.0%
!!!	GACATTTTTGGCCTGTGACT+TGG	-	chr5_3:13405239-13405258	None:intergenic	45.0%
!	GAGATGGACTTGCAGAGAAA+TGG	+	chr5_3:13405282-13405301	Msa0799970:CDS	45.0%
	GCACAAGCAATGGAACTTTC+TGG	+	chr5_3:13405401-13405420	Msa0799970:CDS	45.0%
	AGGCATATGTGAGATCGCTC+GGG	+	chr5_3:13402689-13402708	Msa0799970:five_prime_UTR	50.0%
!	TGGGATTTGGCTTCCTTCTC+TGG	+	chr5_3:13402943-13402962	Msa0799970:five_prime_UTR	50.0%
!	GATTTGGCTTCCTTCTCTGG+TGG	+	chr5_3:13402946-13402965	Msa0799970:five_prime_UTR	50.0%
	TACCGCGAAGAGATTTGCCT+TGG	+	chr5_3:13403105-13403124	Msa0799970:five_prime_UTR	50.0%
	CAATGTAAAGGATGGCGACG+CGG	-	chr5_3:13403647-13403666	None:intergenic	50.0%
	GAGACCGCATCATCCACATT+AGG	-	chr5_3:13403683-13403702	None:intergenic	50.0%
	CCTCGGTAGCTGTCACATTA+CGG	+	chr5_3:13403900-13403919	Msa0799970:intron	50.0%
	GAGGCTGTAGTAGGAGACTT+TGG	+	chr5_3:13404247-13404266	Msa0799970:five_prime_UTR	50.0%
	TACAGTTCCTCTCACTGCTG+TGG	-	chr5_3:13404311-13404330	None:intergenic	50.0%
	ACAGCAGTGAGAGGAACTGT+AGG	+	chr5_3:13404310-13404329	Msa0799970:five_prime_UTR	50.0%
	GCCCCTGAATACCTATCAAC+AGG	+	chr5_3:13404340-13404359	Msa0799970:five_prime_UTR	50.0%
	GGGAAAGCTGCTAACCAGAA+AGG	+	chr5_3:13404445-13404464	Msa0799970:five_prime_UTR	50.0%
	GGGTTCGTCAAGTGACTGTA+AGG	+	chr5_3:13404753-13404772	Msa0799970:intron	50.0%
	AAGGTCACGGGTTCAAGTAC+TGG	+	chr5_3:13404772-13404791	Msa0799970:intron	50.0%
	CTCAGTACCTTCCAAGTCAC+AGG	+	chr5_3:13405225-13405244	Msa0799970:CDS	50.0%
	GGATGATGCGGTCTCTACCA+TGG	+	chr5_3:13403688-13403707	Msa0799970:intron	55.0%
	CCGTAATGTGACAGCTACCG+AGG	-	chr5_3:13403903-13403922	None:intergenic	55.0%
	AGCCAAGCCAGGTCTAGACT+GGG	+	chr5_3:13404102-13404121	Msa0799970:intron	55.0%
	CTTGTTGCCCAGTCTAGACC+TGG	-	chr5_3:13404112-13404131	None:intergenic	55.0%
	CAGGTCTAGACTGGGCAACA+AGG	+	chr5_3:13404110-13404129	Msa0799970:five_prime_UTR	55.0%
	CATGTGACCACAGCAGTGAG+AGG	+	chr5_3:13404301-13404320	Msa0799970:five_prime_UTR	55.0%
!	AGGGGTAACCTTGGTGCAAC+TGG	+	chr5_3:13404699-13404718	Msa0799970:intron	55.0%
!	CAAATGGTGGGACCCCTTTC+CGG	+	chr5_3:13404841-13404860	Msa0799970:intron	55.0%
	CTGAAGCTCACGCATACGCA+GGG	-	chr5_3:13404868-13404887	None:intergenic	55.0%
	ACTGAAGCTCACGCATACGC+AGG	-	chr5_3:13404869-13404888	None:intergenic	55.0%
	ATGCGTGAGCTTCAGTGCAC+CGG	+	chr5_3:13404873-13404892	Msa0799970:intron	55.0%
	CAGCCAAGCCAGGTCTAGAC+TGG	+	chr5_3:13404101-13404120	Msa0799970:intron	60.0%
	TGCCCAGTCTAGACCTGGCT+TGG	-	chr5_3:13404107-13404126	None:intergenic	60.0%
	CATACGCAGGGTCCGGAAAG+GGG	-	chr5_3:13404856-13404875	None:intergenic	60.0%
	GCATACGCAGGGTCCGGAAA+GGG	-	chr5_3:13404857-13404876	None:intergenic	60.0%
	TGCGTGAGCTTCAGTGCACC+GGG	+	chr5_3:13404874-13404893	Msa0799970:intron	60.0%
	TGTGGCCTAGGTCGCAGTCG+CGG	+	chr5_3:13403951-13403970	Msa0799970:intron	65.0%
	CGCATACGCAGGGTCCGGAA+AGG	-	chr5_3:13404858-13404877	None:intergenic	65.0%
	GCTCACGCATACGCAGGGTC+CGG	-	chr5_3:13404863-13404882	None:intergenic	65.0%
	AGGGTCCGCGACTGCGACCT+AGG	-	chr5_3:13403959-13403978	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	13402476	13405775	13402476	ID=Msa0799970;Name=Msa0799970
chr5_3	mRNA	13402476	13405775	13402476	ID=Msa0799970-mRNA-1;Parent=Msa0799970;Name=Msa0799970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=1078\|0.66\|0.75\|1\|1\|1\|4\|342\|110
chr5_3	exon	13402476	13403008	13402476	ID=Msa0799970-mRNA-1:exon:5495;Parent=Msa0799970-mRNA-1
chr5_3	exon	13403100	13403276	13403100	ID=Msa0799970-mRNA-1:exon:5496;Parent=Msa0799970-mRNA-1
chr5_3	exon	13404104	13404483	13404104	ID=Msa0799970-mRNA-1:exon:5497;Parent=Msa0799970-mRNA-1
chr5_3	exon	13405113	13405775	13405113	ID=Msa0799970-mRNA-1:exon:5498;Parent=Msa0799970-mRNA-1
chr5_3	five_prime_UTR	13402476	13403008	13402476	ID=Msa0799970-mRNA-1:five_prime_utr;Parent=Msa0799970-mRNA-1
chr5_3	five_prime_UTR	13403100	13403276	13403100	ID=Msa0799970-mRNA-1:five_prime_utr;Parent=Msa0799970-mRNA-1
chr5_3	five_prime_UTR	13404104	13404471	13404104	ID=Msa0799970-mRNA-1:five_prime_utr;Parent=Msa0799970-mRNA-1
chr5_3	CDS	13404472	13404483	13404472	ID=Msa0799970-mRNA-1:cds;Parent=Msa0799970-mRNA-1
chr5_3	CDS	13405113	13405433	13405113	ID=Msa0799970-mRNA-1:cds;Parent=Msa0799970-mRNA-1
chr5_3	three_prime_UTR	13405434	13405775	13405434	ID=Msa0799970-mRNA-1:three_prime_utr;Parent=Msa0799970-mRNA-1

Gene Sequence	>Msa0799970 ATGCTTGATTGGGTAAAGAAAATACATCAAGAGAAGAAGATTGACGTGTTAGTTGACAAGGACTTGAAAAACAAGTATGATAGGATAGAGTTAGATGAAATAGTTCAAGTGGCTCTTTTATGTACTCAGTACCTTCCAAGTCACAGGCCAAAAATGTCAGAAGTAGTTAGAATGCTTGAAGGAGATGGACTTGCAGAGAAATGGGAAGCGTCGCAAAGAGCTGAATCAACAAGAAGTAGAGGAAATGAACTCTCGTCTTCAGAACGTTATTCTGATCTTACTGATGACTCTTCTTTGCTTGCACAAGCAATGGAACTTTCTGGACCAAGATAA
Protein sequence	>Msa0799970 MLDWVKKIHQEKKIDVLVDKDLKNKYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR*