AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0216930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216930 MtrunA17_Chr2g0318561 98.586 495 7 0 133 627 2 496 0.0 1012
Msa0216930 MtrunA17_Chr8g0360821 64.873 669 171 7 20 625 4 671 0.0 871
Msa0216930 MtrunA17_Chr7g0218341 51.167 514 234 6 111 620 206 706 1.17e-179 526
Msa0216930 MtrunA17_Chr2g0326871 39.787 470 264 9 118 581 177 633 5.57e-108 341
Msa0216930 MtrunA17_Chr4g0028861 40.430 465 260 9 118 577 224 676 8.78e-108 340
Msa0216930 MtrunA17_Chr3g0139071 38.526 475 276 9 121 589 181 645 8.19e-101 323
Msa0216930 MtrunA17_Chr2g0305771 37.903 496 281 11 121 606 151 629 1.20e-98 316
Msa0216930 MtrunA17_Chr3g0125651 38.034 468 276 9 121 581 139 599 1.35e-98 316
Msa0216930 MtrunA17_Chr1g0181121 36.292 507 304 8 118 618 144 637 9.99e-98 313
Msa0216930 MtrunA17_Chr1g0158861 31.908 608 319 14 66 608 76 653 2.73e-97 313
Msa0216930 MtrunA17_Chr4g0073941 38.004 471 262 12 121 578 203 656 9.04e-97 312
Msa0216930 MtrunA17_Chr3g0126541 37.716 464 269 9 121 578 185 634 1.00e-96 311
Msa0216930 MtrunA17_Chr7g0228181 36.897 477 283 11 121 588 147 614 2.38e-91 296
Msa0216930 MtrunA17_Chr4g0001481 35.532 470 284 9 118 578 202 661 6.71e-91 297
Msa0216930 MtrunA17_Chr7g0275581 35.805 472 271 8 121 578 187 640 9.87e-91 296
Msa0216930 MtrunA17_Chr8g0347121 30.380 632 315 18 52 581 45 653 2.18e-82 274
Msa0216930 MtrunA17_Chr6g0481021 34.864 479 289 8 121 586 227 695 1.39e-79 266
Msa0216930 MtrunA17_Chr6g0480851 33.659 511 307 10 88 583 255 748 2.29e-78 264
Msa0216930 MtrunA17_Chr6g0480781 29.767 514 323 11 88 583 240 733 3.83e-75 255
Msa0216930 MtrunA17_Chr6g0480671 35.551 481 270 12 121 582 297 756 3.57e-72 247
Msa0216930 MtrunA17_Chr6g0480741 29.216 510 323 13 88 580 186 674 6.05e-61 215
Msa0216930 MtrunA17_Chr6g0480681 29.614 466 285 13 154 599 280 722 3.21e-51 189
Msa0216930 MtrunA17_Chr2g0318551 61.667 180 12 4 14 137 1 179 1.12e-46 164
Msa0216930 MtrunA17_Chr5g0395421 32.778 360 205 9 215 559 18 355 2.72e-41 154
Msa0216930 MtrunA17_Chr6g0480771 33.333 249 146 6 343 579 12 252 1.34e-32 127
Msa0216930 MtrunA17_Chr6g0480841 36.683 199 109 5 397 583 2 195 4.08e-27 109
Msa0216930 MtrunA17_Chr2g0326861 30.952 168 104 3 118 284 40 196 1.84e-21 93.6
Msa0216930 MtrunA17_Chr5g0395411 29.771 131 88 2 88 216 230 358 3.26e-15 77.8
Msa0216930 MtrunA17_Chr2g0326851 48.387 62 31 1 520 581 3 63 9.94e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216930 AT5G54250.2 76.000 525 122 3 102 625 171 692 0.0 828
Msa0216930 AT5G54250.1 76.000 525 122 3 102 625 171 692 0.0 828
Msa0216930 AT5G54250.4 76.000 525 122 3 102 625 171 692 0.0 828
Msa0216930 AT5G54250.3 75.048 525 122 4 102 625 171 687 0.0 812
Msa0216930 AT5G15410.2 48.155 515 259 6 111 620 210 721 6.42e-161 479
Msa0216930 AT5G15410.1 48.155 515 259 6 111 620 211 722 1.03e-160 478
Msa0216930 AT2G28260.2 40.426 470 261 8 118 581 128 584 3.91e-111 347
Msa0216930 AT2G28260.1 40.426 470 261 8 118 581 168 624 9.09e-111 348
Msa0216930 AT5G57940.1 39.873 474 258 11 121 581 192 651 2.80e-102 327
Msa0216930 AT5G57940.2 39.873 474 258 11 121 581 192 651 2.80e-102 327
Msa0216930 AT5G57940.3 39.873 474 258 11 121 581 185 644 4.70e-102 326
Msa0216930 AT2G24610.1 38.105 475 278 10 121 589 178 642 2.59e-99 319
Msa0216930 AT2G24610.2 38.105 475 278 10 121 589 193 657 7.12e-99 318
Msa0216930 AT4G30360.1 37.866 478 276 9 121 590 179 643 1.50e-98 317
Msa0216930 AT2G23980.6 38.333 480 270 10 121 587 180 646 2.76e-98 316
Msa0216930 AT1G01340.2 36.437 494 283 9 121 608 172 640 6.34e-98 315
Msa0216930 AT2G23980.9 38.333 480 270 10 121 587 207 673 8.88e-98 315
Msa0216930 AT2G23980.10 38.333 480 270 10 121 587 207 673 8.88e-98 315
Msa0216930 AT2G23980.1 38.333 480 270 10 121 587 207 673 8.88e-98 315
Msa0216930 AT2G23980.4 38.333 480 270 10 121 587 207 673 8.88e-98 315
Msa0216930 AT2G23980.5 38.333 480 270 10 121 587 207 673 8.88e-98 315
Msa0216930 AT1G01340.1 36.437 494 283 9 121 608 167 635 1.11e-97 314
Msa0216930 AT4G30560.5 38.285 478 272 11 121 587 181 646 3.81e-97 313
Msa0216930 AT4G30560.2 38.285 478 272 11 121 587 181 646 3.81e-97 313
Msa0216930 AT4G30560.3 38.285 478 272 11 121 587 181 646 3.81e-97 313
Msa0216930 AT4G30560.1 38.285 478 272 11 121 587 207 672 6.74e-97 313
Msa0216930 AT4G30560.4 38.285 478 272 11 121 587 207 672 6.74e-97 313
Msa0216930 AT5G53130.1 37.313 469 263 9 121 578 188 636 2.12e-96 311
Msa0216930 AT1G19780.1 37.447 470 276 10 121 581 201 661 1.54e-95 310
Msa0216930 AT1G15990.1 37.448 478 265 11 121 581 195 655 2.29e-95 309
Msa0216930 AT4G01010.1 35.556 495 287 10 121 608 172 641 6.18e-95 306
Msa0216930 AT4G01010.2 35.556 495 287 10 121 608 172 641 6.18e-95 306
Msa0216930 AT1G19780.2 38.391 435 253 8 155 581 23 450 1.29e-93 299
Msa0216930 AT2G23980.3 36.581 503 270 11 121 587 207 696 7.25e-93 303
Msa0216930 AT2G23980.2 36.581 503 270 11 121 587 207 696 7.25e-93 303
Msa0216930 AT2G23980.8 36.581 503 270 11 121 587 207 696 7.25e-93 303
Msa0216930 AT2G23980.7 36.581 503 270 11 121 587 207 696 7.25e-93 303
Msa0216930 AT5G14870.1 37.029 478 282 11 121 589 143 610 9.70e-93 301
Msa0216930 AT3G48010.1 36.632 475 275 9 121 581 148 610 5.14e-92 299
Msa0216930 AT2G46430.1 35.425 494 284 12 121 607 176 641 1.30e-87 288
Msa0216930 AT2G46430.2 35.425 494 284 12 121 607 176 641 1.30e-87 288
Msa0216930 AT3G17690.1 33.663 505 306 13 88 581 229 715 9.50e-81 270
Msa0216930 AT3G17700.1 36.481 466 269 10 121 575 296 745 3.82e-79 266
Msa0216930 AT2G46450.2 33.054 478 275 15 121 581 110 559 1.34e-71 243
Msa0216930 AT2G46450.3 33.054 478 275 15 121 581 97 546 2.10e-71 242
Msa0216930 AT2G46450.4 33.054 478 275 15 121 581 133 582 3.39e-71 242
Msa0216930 AT2G46450.1 33.054 478 275 15 121 581 133 582 3.39e-71 242
Msa0216930 AT3G17690.2 33.254 421 261 10 88 505 229 632 1.03e-67 233
Msa0216930 AT3G17700.2 37.113 388 227 8 121 507 296 667 2.37e-67 233
Msa0216930 AT2G46440.1 32.207 503 289 15 121 607 133 599 2.89e-62 218
Msa0216930 AT2G46440.2 32.798 436 254 10 185 607 12 421 1.50e-58 203
Msa0216930 AT3G17690.3 30.000 300 195 7 88 384 229 516 3.96e-37 145
Msa0216930 AT5G37500.4 25.116 215 154 5 302 513 261 471 3.89e-15 79.3
Msa0216930 AT5G37500.1 25.234 214 153 5 303 513 262 471 5.51e-15 79.3
Msa0216930 AT5G37500.2 25.234 214 153 5 303 513 262 471 5.60e-15 79.3
Msa0216930 AT5G37500.3 25.234 214 153 5 303 513 208 417 6.12e-15 79.0
Msa0216930 AT3G02850.3 22.326 215 160 5 303 514 279 489 4.56e-13 72.8
Msa0216930 AT3G02850.2 22.430 214 159 5 303 513 279 488 6.02e-13 72.4
Msa0216930 AT3G02850.1 22.430 214 159 5 303 513 279 488 7.04e-13 72.4

Find 124 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGTTGTCAGCACTTT+TGG 0.210717 2_1:+63125642 Msa0216930:intron
AGATACTCCTTCCTATCTTT+TGG 0.215218 2_1:+63124804 Msa0216930:CDS
CTTCTAGTCACTATGCTAAT+TGG 0.241612 2_1:+63125732 Msa0216930:CDS
TGAATTCTTTGTCCTTTATT+AGG 0.242505 2_1:+63127077 Msa0216930:CDS
TTTGTCAAGGTCTACTTCTT+TGG 0.268654 2_1:+63127111 Msa0216930:CDS
AAACATAAACGCTCCTCTTT+TGG 0.273915 2_1:+63122261 Msa0216930:CDS
TATCAAGTACCATCTTTGTT+TGG 0.281982 2_1:+63126294 Msa0216930:CDS
AGTGCTGATAACTATGAATT+TGG 0.287072 2_1:+63124731 Msa0216930:CDS
GATAAAGATGTTAAAGAAAA+AGG 0.300042 2_1:-63122337 None:intergenic
GTTGGAAGACGTTCTATAAA+TGG 0.317969 2_1:-63126724 None:intergenic
GGCTGCTGTGGCAATTCAAT+TGG 0.324383 2_1:+63127024 Msa0216930:CDS
GTTAAAAGCTGTTGTATGTT+AGG 0.328738 2_1:+63126652 Msa0216930:CDS
ATCAAGTACCATCTTTGTTT+GGG 0.333486 2_1:+63126295 Msa0216930:CDS
TAACTCCATCTCTTAGGAAT+TGG 0.337128 2_1:-63126633 None:intergenic
ACTCACCTGGTTGGAGAACT+TGG 0.342981 2_1:+63127002 Msa0216930:CDS
AGGGTCATGTTGGTATTTGT+TGG 0.347194 2_1:+63124529 Msa0216930:CDS
TTATAGTTTCCATAGTATAT+TGG 0.355926 2_1:-63124635 None:intergenic
GTACCATCTTTGTTTGGGTT+TGG 0.357835 2_1:+63126300 Msa0216930:CDS
TGCAAAGAACCAATATACTA+TGG 0.378037 2_1:+63124626 Msa0216930:CDS
TAGACAGAACAAGGTTGGTT+TGG 0.386399 2_1:+63124672 Msa0216930:CDS
TCATCTCCACTGAAGTTTCC+TGG 0.390660 2_1:-63126676 None:intergenic
ATGAATTTGGAGTTTATGAA+TGG 0.394019 2_1:+63124744 Msa0216930:CDS
GGGTCATGTTGGTATTTGTT+GGG 0.397628 2_1:+63124530 Msa0216930:CDS
ACAAATAGCATTCTACGAAC+TGG 0.398087 2_1:-63126586 None:intergenic
AATTGGCTTGGAGAAGGTAT+AGG 0.400107 2_1:+63127041 Msa0216930:CDS
CAATTAGCATAGTGACTAGA+AGG 0.401970 2_1:-63125731 None:intergenic
TACTTGATCCAAGAGGAAAA+TGG 0.403260 2_1:+63122037 Msa0216930:CDS
TTAGGAATTGGCTACTTTGA+AGG 0.405487 2_1:-63126621 None:intergenic
GGCTTTGTTGGCTTTGAAGA+AGG 0.425788 2_1:-63122316 None:intergenic
AAACTTGAGTGATGTTGATC+GGG 0.429397 2_1:-63121826 None:intergenic
TCTTCATAACATCCTGTTTG+TGG 0.432897 2_1:+63127202 Msa0216930:exon
TTGTTTGGGTTTGGTGAGAC+AGG 0.441635 2_1:+63126309 Msa0216930:CDS
GAGTCAAAATCATCGACATT+AGG 0.441734 2_1:-63127181 None:intergenic
AGGCCTACGAGGCCTAATAA+AGG 0.444915 2_1:-63127089 None:intergenic
CCATCCTTTCTGTTGTACTC+TGG 0.448749 2_1:-63125671 None:intergenic
ACTTGATCCAAGAGGAAAAT+GGG 0.451152 2_1:+63122038 Msa0216930:CDS
TCCAACATCATCATCAACTT+TGG 0.456307 2_1:+63126741 Msa0216930:CDS
GTCATTAGGCCCCAAAAGAT+AGG 0.457093 2_1:-63124815 None:intergenic
AAATCATCGACATTAGGCTT+TGG 0.461854 2_1:-63127175 None:intergenic
GTAGAATGCTATTTGTGGTA+AGG 0.461877 2_1:+63126593 Msa0216930:CDS
TTTGGGGCCTAATGACTCTC+AGG 0.466761 2_1:+63124822 Msa0216930:CDS
AATAAAGGACAAAGAATTCA+AGG 0.472507 2_1:-63127074 None:intergenic
TTCTATCATGGTGTTTAAGA+AGG 0.475341 2_1:+63126701 Msa0216930:CDS
GAAATTAGACAGAACAAGGT+TGG 0.478036 2_1:+63124667 Msa0216930:CDS
CTGTGGCAATTCAATTGGCT+TGG 0.478572 2_1:+63127029 Msa0216930:CDS
GAGGAAAATGGGCTGAAGAA+TGG 0.486947 2_1:+63122049 Msa0216930:CDS
AAGTCCCTTGTATTCACAAA+AGG 0.487195 2_1:+63126460 Msa0216930:CDS
TATCCTCCTCCCTCTCCCTC+AGG 0.489371 2_1:+63122356 Msa0216930:CDS
AAGGTCTACTTCTTTGGAAG+AGG 0.489376 2_1:+63127117 Msa0216930:CDS
CCTTCCTAAAATTTATCACT+CGG 0.489565 2_1:+63124235 Msa0216930:CDS
GTGCGTCGAAACCTCACAAA+TGG 0.493386 2_1:+63124266 Msa0216930:CDS
TCCTTTCTGTTGTACTCTGG+AGG 0.494095 2_1:-63125668 None:intergenic
TAGAATGCTATTTGTGGTAA+GGG 0.494337 2_1:+63126594 Msa0216930:CDS
AGTTCGTAGAATGCTATTTG+TGG 0.494344 2_1:+63126588 Msa0216930:CDS
AAAACTTGAGTGATGTTGAT+CGG 0.495921 2_1:-63121827 None:intergenic
ATATCCCTTCTCAAACCCTC+CGG 0.502776 2_1:-63126274 None:intergenic
GATCCTTGCTCTAACAAAGA+TGG 0.503367 2_1:-63124164 None:intergenic
GAGCAATGTGAGACAACAAC+TGG 0.505384 2_1:+63124581 Msa0216930:CDS
GGTATTTGTTGGGACTTCAA+AGG 0.518699 2_1:+63124540 Msa0216930:CDS
TATATGGTGAAACAGGCAGC+AGG 0.520127 2_1:+63124509 Msa0216930:intron
TTACCTGAGGGAGAGGGAGG+AGG 0.520907 2_1:-63122359 None:intergenic
TTGGAGAACTTGGGCTGCTG+TGG 0.530447 2_1:+63127012 Msa0216930:CDS
TAACTACGAGAGACAGTGTT+GGG 0.530575 2_1:+63126207 Msa0216930:CDS
CAATTCAATTGGCTTGGAGA+AGG 0.530721 2_1:+63127035 Msa0216930:CDS
TGTCCTTTATTAGGCCTCGT+AGG 0.534654 2_1:+63127086 Msa0216930:CDS
CAAATAGCATTCTACGAACT+GGG 0.537490 2_1:-63126585 None:intergenic
ATTCCATCTTTGTTAGAGCA+AGG 0.537624 2_1:+63124161 Msa0216930:CDS
AGTAGCCAATTCCTAAGAGA+TGG 0.538975 2_1:+63126628 Msa0216930:CDS
TAAATAATTACCTGAGGGAG+AGG 0.541037 2_1:-63122366 None:intergenic
GAAAATACCTGAGAGTCATT+AGG 0.541685 2_1:-63124829 None:intergenic
GTATTTGTTGGGACTTCAAA+GGG 0.546964 2_1:+63124541 Msa0216930:CDS
CAGTGTTGGGCTGCCATGCG+CGG 0.554243 2_1:+63126220 Msa0216930:CDS
CTTGGAGAAGGTATAGGCAT+AGG 0.554858 2_1:+63127047 Msa0216930:CDS
ATGATGAATGAAGCCAAAAG+AGG 0.559467 2_1:-63122274 None:intergenic
TTAGATATTACTCACCTGGT+TGG 0.563077 2_1:+63126993 Msa0216930:CDS
CCAGAGTACAACAGAAAGGA+TGG 0.563680 2_1:+63125671 Msa0216930:CDS
TCACCAAACCCAAACAAAGA+TGG 0.566389 2_1:-63126303 None:intergenic
CTCACCTGGTTGGAGAACTT+GGG 0.567396 2_1:+63127003 Msa0216930:CDS
TGCATACAGTTAACAAGAGA+AGG 0.570005 2_1:+63126559 Msa0216930:intron
AACACTATTATATTAACTAG+TGG 0.571292 2_1:+63125705 Msa0216930:CDS
GACAGTTACCACAAGGACTT+CGG 0.573129 2_1:+63126173 Msa0216930:CDS
AGCTGTTGTATGTTAGGACC+AGG 0.573868 2_1:+63126658 Msa0216930:CDS
GTGGAGATGAGCTTCTATCA+TGG 0.575590 2_1:+63126689 Msa0216930:CDS
ACATTCATCAACGCCGCGCA+TGG 0.577989 2_1:-63126233 None:intergenic
TATGCTAATTGGAAACATCA+AGG 0.582197 2_1:+63125743 Msa0216930:CDS
ATCTCCCGGAGGGTTTGAGA+AGG 0.585770 2_1:+63126269 Msa0216930:CDS
TATCCCTTCTCAAACCCTCC+GGG 0.586412 2_1:-63126273 None:intergenic
AGTGTTAGATATTACTCACC+TGG 0.588815 2_1:+63126989 Msa0216930:CDS
AACAGGCAGCAGGGTCATGT+TGG 0.591008 2_1:+63124519 Msa0216930:intron
ACCAAAGTTGATGATGATGT+TGG 0.592070 2_1:-63126742 None:intergenic
TGTGAGACAACAACTGGTTG+TGG 0.592350 2_1:+63124587 Msa0216930:CDS
TAATTACCTGAGGGAGAGGG+AGG 0.593631 2_1:-63122362 None:intergenic
ATCGTCGATGTCATCGTCAG+TGG 0.598201 2_1:-63121881 None:intergenic
GGCCTCGTAGGCCTTTGTCA+AGG 0.598683 2_1:+63127098 Msa0216930:CDS
GTGAGACAACAACTGGTTGT+GGG 0.601185 2_1:+63124588 Msa0216930:CDS
TGAAGAAATTAGACAGAACA+AGG 0.603321 2_1:+63124663 Msa0216930:CDS
AAATAATTACCTGAGGGAGA+GGG 0.607454 2_1:-63122365 None:intergenic
TGAATACAAGGGACTTGACA+CGG 0.609591 2_1:-63126453 None:intergenic
TTAGGCCCCAAAAGATAGGA+AGG 0.610853 2_1:-63124811 None:intergenic
AACTTGAGTGATGTTGATCG+GGG 0.611958 2_1:-63121825 None:intergenic
ATCGACATTAGGCTTTGGTG+AGG 0.612185 2_1:-63127170 None:intergenic
GGTCACAGAATTCAGAAGCA+AGG 0.613640 2_1:+63124693 Msa0216930:CDS
GATAGCGAATCCCCACCAAA+CGG 0.616213 2_1:-63124303 None:intergenic
TCTCCCGGAGGGTTTGAGAA+GGG 0.616232 2_1:+63126270 Msa0216930:CDS
AGAGCAAGGATCAATTGCGC+GGG 0.622769 2_1:+63124175 Msa0216930:CDS
GCAGCCCAAGTTCTCCAACC+AGG 0.629666 2_1:-63127007 None:intergenic
ACCTCCAGAGTACAACAGAA+AGG 0.635309 2_1:+63125667 Msa0216930:CDS
AGAATGCTATTTGTGGTAAG+GGG 0.637257 2_1:+63126595 Msa0216930:CDS
TAGAGCAAGGATCAATTGCG+CGG 0.643328 2_1:+63124174 Msa0216930:CDS
ACACGCTGCCGAAGTCCTTG+TGG 0.649683 2_1:-63126181 None:intergenic
TTAGGACCAGGAAACTTCAG+TGG 0.652388 2_1:+63126670 Msa0216930:CDS
GAAATTGAAGATGACAAACA+TGG 0.653767 2_1:+63126132 Msa0216930:CDS
GACCTTGACAAAGGCCTACG+AGG 0.673725 2_1:-63127100 None:intergenic
TGAAGATGACAAACATGGAG+TGG 0.674136 2_1:+63126137 Msa0216930:CDS
AACAAAAGACAGTTACCACA+AGG 0.678519 2_1:+63126166 Msa0216930:CDS
ATATGGTGAAACAGGCAGCA+GGG 0.685470 2_1:+63124510 Msa0216930:intron
AGATGACAAACATGGAGTGG+TGG 0.685912 2_1:+63126140 Msa0216930:CDS
GTAACTACGAGAGACAGTGT+TGG 0.686561 2_1:+63126206 Msa0216930:CDS
AAAGAAGTAGACCTTGACAA+AGG 0.689518 2_1:-63127109 None:intergenic
CGATAGCGACGAGTACGATG+AGG 0.693290 2_1:+63121927 Msa0216930:CDS
CGACGATATCGTCAACAACG+AGG 0.696721 2_1:+63121897 Msa0216930:CDS
TTAGCATAGTGACTAGAAGG+AGG 0.697558 2_1:-63125728 None:intergenic
AGGGTATTACTTGATCCAAG+AGG 0.706932 2_1:+63122030 Msa0216930:CDS
ACTTGAGTGATGTTGATCGG+GGG 0.715749 2_1:-63121824 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTATTAAGATTAAATT+TGG + chr2_1:63123452-63123471 Msa0216930:intron 10.0%
!! ATAAAACAAATAAAATATGT+TGG - chr2_1:63123581-63123600 None:intergenic 10.0%
!!! TATAGAATATTTAATTTGTT+TGG - chr2_1:63124043-63124062 None:intergenic 10.0%
!!! TGAAATTTTTAAAATGTATT+TGG + chr2_1:63124091-63124110 Msa0216930:intron 10.0%
!!! AACTTTTTATACTATATATA+TGG + chr2_1:63124493-63124512 Msa0216930:intron 10.0%
!!! AAAAAAAAAACTCTTTTTAT+TGG + chr2_1:63125080-63125099 Msa0216930:intron 10.0%
!!! AAATAAGTATTTTAATTGAA+GGG - chr2_1:63125246-63125265 None:intergenic 10.0%
!! TTCAATTAAAATACTTATTT+GGG + chr2_1:63125246-63125265 Msa0216930:intron 10.0%
!!! TTTTTCTTAAAAAAATTGAA+GGG - chr2_1:63125898-63125917 None:intergenic 10.0%
!!! ATTTTTCTTAAAAAAATTGA+AGG - chr2_1:63125899-63125918 None:intergenic 10.0%
!!! TATTTTATTTTTTACAAAAG+AGG + chr2_1:63126347-63126366 Msa0216930:intron 10.0%
!!! ATTTTATTTTTTACAAAAGA+GGG + chr2_1:63126348-63126367 Msa0216930:intron 10.0%
!! CTATTTATAAGAAGAATATT+TGG - chr2_1:63122685-63122704 None:intergenic 15.0%
!! CAAATATTCTTCTTATAAAT+AGG + chr2_1:63122683-63122702 Msa0216930:intron 15.0%
!!! TAAGCAAAAATCAATTTTTT+AGG - chr2_1:63122835-63122854 None:intergenic 15.0%
!!! TGTGAATTTTGTTATTATAT+TGG + chr2_1:63123022-63123041 Msa0216930:intron 15.0%
!!! TTAAAATTAGTCATCTTTTT+AGG + chr2_1:63123229-63123248 Msa0216930:intron 15.0%
!! AATTTAAAAATATCACTTCT+AGG + chr2_1:63123410-63123429 Msa0216930:intron 15.0%
!! AAAAAATTAAGGGATATTTA+TGG - chr2_1:63123540-63123559 None:intergenic 15.0%
!!! AACTTTATGATTTTAAATTG+TGG + chr2_1:63124865-63124884 Msa0216930:intron 15.0%
!! TAAATAGACTTATTTGAATT+TGG - chr2_1:63125010-63125029 None:intergenic 15.0%
!!! CAAATAAGTATTTTAATTGA+AGG - chr2_1:63125247-63125266 None:intergenic 15.0%
!! CTTCAATTAAAATACTTATT+TGG + chr2_1:63125245-63125264 Msa0216930:intron 15.0%
!!! TTTTTAAGAAAAATGAATCT+TGG + chr2_1:63125905-63125924 Msa0216930:intron 15.0%
!!! TACATTTTGATTTTTTTTGT+TGG + chr2_1:63126059-63126078 Msa0216930:intron 15.0%
!! GATAAAGATGTTAAAGAAAA+AGG - chr2_1:63122340-63122359 None:intergenic 20.0%
!! TATTACATTGTAAATACCAT+TGG + chr2_1:63122432-63122451 Msa0216930:intron 20.0%
!! TATCTTATAAAAAGAACCAA+TGG - chr2_1:63122451-63122470 None:intergenic 20.0%
!! TATGTAAATAATACTCCATT+CGG + chr2_1:63122576-63122595 Msa0216930:intron 20.0%
!! CATTGAGTAAATAATGTATT+TGG - chr2_1:63122899-63122918 None:intergenic 20.0%
!! CCATTATTAAATACTTTATC+CGG - chr2_1:63122956-63122975 None:intergenic 20.0%
!! TAAGAGAAGTAAAATATTGT+GGG - chr2_1:63122992-63123011 None:intergenic 20.0%
!! ATAAGAGAAGTAAAATATTG+TGG - chr2_1:63122993-63123012 None:intergenic 20.0%
!!! AAAGATGACTAATTTTAAGT+GGG - chr2_1:63123227-63123246 None:intergenic 20.0%
!!! AAAAGATGACTAATTTTAAG+TGG - chr2_1:63123228-63123247 None:intergenic 20.0%
!! GAAAAGATTCAAAAACTAAA+AGG + chr2_1:63123327-63123346 Msa0216930:intron 20.0%
!! TCCTTAAAAAAGAAAAAACT+AGG + chr2_1:63123637-63123656 Msa0216930:intron 20.0%
!!! ACCTAGTTTTTTCTTTTTTA+AGG - chr2_1:63123641-63123660 None:intergenic 20.0%
!! TTATAGTTTCCATAGTATAT+TGG - chr2_1:63124638-63124657 None:intergenic 20.0%
!! TTGGAATATAACAAATTTAG+AGG - chr2_1:63124991-63125010 None:intergenic 20.0%
!!! CACAACATATTTTTTTTGAA+TGG - chr2_1:63125048-63125067 None:intergenic 20.0%
!!! TTAAAATACTTATTTGGGTT+CGG + chr2_1:63125251-63125270 Msa0216930:intron 20.0%
!!! CAACATCTTTTAAATTTACA+AGG - chr2_1:63125278-63125297 None:intergenic 20.0%
!! AACACTATTATATTAACTAG+TGG + chr2_1:63125705-63125724 Msa0216930:CDS 20.0%
!! ATTAATCTTGCTAAACAAAA+TGG - chr2_1:63125839-63125858 None:intergenic 20.0%
!! TAATTATGTCACACATATTA+TGG - chr2_1:63125863-63125882 None:intergenic 20.0%
!!! TTTTTGTTGGTGAATATAAT+AGG + chr2_1:63126072-63126091 Msa0216930:intron 20.0%
!! CTAAATTGCATTATTATTCT+AGG + chr2_1:63126497-63126516 Msa0216930:intron 20.0%
!!! TTCATCTTTTTCATTGAGTA+GGG + chr2_1:63122011-63122030 Msa0216930:CDS 25.0%
! ATCCATAAATAATTACCTGA+GGG - chr2_1:63122374-63122393 None:intergenic 25.0%
! TTGTCTCGTATAAAAAGAAT+TGG + chr2_1:63122537-63122556 Msa0216930:intron 25.0%
! CCAAACTTTCTCTTATAAAT+AGG - chr2_1:63122603-63122622 None:intergenic 25.0%
! CCTATTTATAAGAGAAAGTT+TGG + chr2_1:63122600-63122619 Msa0216930:intron 25.0%
! TTCTTATAAATAGGACAAGA+GGG + chr2_1:63122692-63122711 Msa0216930:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr2_1:63122934-63122953 Msa0216930:intron 25.0%
!! CCGGATAAAGTATTTAATAA+TGG + chr2_1:63122953-63122972 Msa0216930:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG - chr2_1:63123338-63123357 None:intergenic 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG - chr2_1:63123337-63123356 None:intergenic 25.0%
! GAAACGATTCAAAAACTAAA+AGG - chr2_1:63123125-63123144 None:intergenic 25.0%
!! TTTCAAACAAGTCTTTTTAG+CGG - chr2_1:63123311-63123330 None:intergenic 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG + chr2_1:63123337-63123356 Msa0216930:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG + chr2_1:63123338-63123357 Msa0216930:intron 25.0%
!! ATGCATAACTTTATGTGTTT+TGG + chr2_1:63123810-63123829 Msa0216930:intron 25.0%
! AACAAAGTTGAGTATTTGTA+TGG - chr2_1:63123954-63123973 None:intergenic 25.0%
!! ATTTTGTCTATGTAGATGTT+TGG + chr2_1:63124431-63124450 Msa0216930:intron 25.0%
! TACTATATATATGGTGAAAC+AGG + chr2_1:63124502-63124521 Msa0216930:intron 25.0%
!! ATGAATTTGGAGTTTATGAA+TGG + chr2_1:63124744-63124763 Msa0216930:CDS 25.0%
! TTTACCGTAATATAAAGGTT+TGG - chr2_1:63124923-63124942 None:intergenic 25.0%
!! CACATTTTACCGTAATATAA+AGG - chr2_1:63124928-63124947 None:intergenic 25.0%
! CTTTATATTACGGTAAAATG+TGG + chr2_1:63124926-63124945 Msa0216930:intron 25.0%
! CAACAAATCTTCAATTTAAG+AGG + chr2_1:63125369-63125388 Msa0216930:intron 25.0%
! ATTCATTTGAGAGAAAAAGT+TGG - chr2_1:63125473-63125492 None:intergenic 25.0%
! TGAATTTCAATTGGGTATAA+TGG - chr2_1:63125496-63125515 None:intergenic 25.0%
! TGTCATCATGAATTTCAATT+GGG - chr2_1:63125504-63125523 None:intergenic 25.0%
! ATGTCATCATGAATTTCAAT+TGG - chr2_1:63125505-63125524 None:intergenic 25.0%
!!! TCATTCTCACAAAAGTTTTT+TGG + chr2_1:63125621-63125640 Msa0216930:intron 25.0%
! AAGGTACGTAATAATTAACA+AGG + chr2_1:63125762-63125781 Msa0216930:intron 25.0%
! TAATTAACAAGGACTTACTT+AGG + chr2_1:63125773-63125792 Msa0216930:intron 25.0%
!! ATGAATCTTGGTAATTCATT+TGG + chr2_1:63125917-63125936 Msa0216930:intron 25.0%
!! TTTTCAACATATGGATGAAT+TGG + chr2_1:63126411-63126430 Msa0216930:CDS 25.0%
!! AATATGTGACGCAAAATTTT+AGG + chr2_1:63126812-63126831 Msa0216930:CDS 25.0%
! CAAATGTGTACCTAAAATTA+GGG - chr2_1:63126949-63126968 None:intergenic 25.0%
! AATAAAGGACAAAGAATTCA+AGG - chr2_1:63127077-63127096 None:intergenic 25.0%
! TGAATTCTTTGTCCTTTATT+AGG + chr2_1:63127077-63127096 Msa0216930:CDS 25.0%
AAAACTTGAGTGATGTTGAT+CGG - chr2_1:63121830-63121849 None:intergenic 30.0%
! GAAAAAGATGAACGTTTTTG+TGG - chr2_1:63122003-63122022 None:intergenic 30.0%
!! GTTCATCTTTTTCATTGAGT+AGG + chr2_1:63122010-63122029 Msa0216930:CDS 30.0%
! ATGGAATAGAGTTTTTCTTC+TGG + chr2_1:63122068-63122087 Msa0216930:CDS 30.0%
!!! TGTATGTGTCTGTTTTTAGA+TGG + chr2_1:63122153-63122172 Msa0216930:intron 30.0%
!! TGTTACATCTCTGGAATATT+TGG + chr2_1:63122220-63122239 Msa0216930:intron 30.0%
! GTTAAAGAAAAAGGCTTTGT+TGG - chr2_1:63122331-63122350 None:intergenic 30.0%
GATCCATAAATAATTACCTG+AGG - chr2_1:63122375-63122394 None:intergenic 30.0%
GTGAGTTAACAAAAATTACG+TGG + chr2_1:63122474-63122493 Msa0216930:intron 30.0%
CTTCTTATAAATAGGACAAG+AGG + chr2_1:63122691-63122710 Msa0216930:intron 30.0%
TATTGGTCAAATGCATCTAA+AGG + chr2_1:63123039-63123058 Msa0216930:intron 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG - chr2_1:63123356-63123375 None:intergenic 30.0%
!! ACTAATTTTAAGTGGGTGTT+AGG - chr2_1:63123220-63123239 None:intergenic 30.0%
!! ATTAGTCATCTTTTTAGGCA+TGG + chr2_1:63123234-63123253 Msa0216930:intron 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG + chr2_1:63123356-63123375 Msa0216930:intron 30.0%
! TGAAACTTAAAGGACTTGTT+TGG + chr2_1:63123366-63123385 Msa0216930:intron 30.0%
! GAAACTTAAAGGACTTGTTT+GGG + chr2_1:63123367-63123386 Msa0216930:intron 30.0%
AAGGGATATTTATGGTGAAT+GGG - chr2_1:63123532-63123551 None:intergenic 30.0%
TAAGGGATATTTATGGTGAA+TGG - chr2_1:63123533-63123552 None:intergenic 30.0%
TTTAAGGATCATGACAAAGT+AGG - chr2_1:63123625-63123644 None:intergenic 30.0%
! TTGTTTTCATACATGCAGAT+TGG + chr2_1:63123717-63123736 Msa0216930:intron 30.0%
! AGCTTATGATTACACACTTT+TGG + chr2_1:63123891-63123910 Msa0216930:intron 30.0%
! TGTTTTGCAGATTGTGTTAT+GGG + chr2_1:63124133-63124152 Msa0216930:intron 30.0%
!!! TTTTAGGAAGGTATTGAAAC+AGG - chr2_1:63124226-63124245 None:intergenic 30.0%
CCTTCCTAAAATTTATCACT+CGG + chr2_1:63124235-63124254 Msa0216930:CDS 30.0%
CAAAAATGAAACCATTTGTG+AGG - chr2_1:63124280-63124299 None:intergenic 30.0%
! CTCACAAATGGTTTCATTTT+TGG + chr2_1:63124278-63124297 Msa0216930:CDS 30.0%
GTAATCGTTAGTACTTACAT+GGG - chr2_1:63124354-63124373 None:intergenic 30.0%
AGTAATCGTTAGTACTTACA+TGG - chr2_1:63124355-63124374 None:intergenic 30.0%
TCTACATAGACAAAATTGCA+GGG - chr2_1:63124427-63124446 None:intergenic 30.0%
ATCTACATAGACAAAATTGC+AGG - chr2_1:63124428-63124447 None:intergenic 30.0%
TATGTAGATGTTTGGATTGA+CGG + chr2_1:63124439-63124458 Msa0216930:intron 30.0%
CGGTTAAATTGTCAAAATCA+TGG + chr2_1:63124459-63124478 Msa0216930:intron 30.0%
TGCAAAGAACCAATATACTA+TGG + chr2_1:63124626-63124645 Msa0216930:CDS 30.0%
TGAAGAAATTAGACAGAACA+AGG + chr2_1:63124663-63124682 Msa0216930:CDS 30.0%
!! AGTGCTGATAACTATGAATT+TGG + chr2_1:63124731-63124750 Msa0216930:CDS 30.0%
!!! GAAGGAGTATCTTTTCAATT+CGG - chr2_1:63124796-63124815 None:intergenic 30.0%
TTATTGAGCGTGATTATGTT+GGG + chr2_1:63125319-63125338 Msa0216930:intron 30.0%
TATGCTAATTGGAAACATCA+AGG + chr2_1:63125743-63125762 Msa0216930:CDS 30.0%
GAAATTGAAGATGACAAACA+TGG + chr2_1:63126132-63126151 Msa0216930:CDS 30.0%
TATCAAGTACCATCTTTGTT+TGG + chr2_1:63126294-63126313 Msa0216930:CDS 30.0%
! ATCAAGTACCATCTTTGTTT+GGG + chr2_1:63126295-63126314 Msa0216930:CDS 30.0%
AATGCTTCAAAATCTTGTTC+AGG + chr2_1:63126381-63126400 Msa0216930:intron 30.0%
TCATCCATATGTTGAAAAAG+TGG - chr2_1:63126409-63126428 None:intergenic 30.0%
! TTCTCCTTTTGTGAATACAA+GGG - chr2_1:63126467-63126486 None:intergenic 30.0%
! TTTCTCCTTTTGTGAATACA+AGG - chr2_1:63126468-63126487 None:intergenic 30.0%
! TAGAATGCTATTTGTGGTAA+GGG + chr2_1:63126594-63126613 Msa0216930:CDS 30.0%
GTTAAAAGCTGTTGTATGTT+AGG + chr2_1:63126652-63126671 Msa0216930:CDS 30.0%
TTCTATCATGGTGTTTAAGA+AGG + chr2_1:63126701-63126720 Msa0216930:CDS 30.0%
GCAAATGTGTACCTAAAATT+AGG - chr2_1:63126950-63126969 None:intergenic 30.0%
! TCAATTCATTTTCCACAAAC+AGG - chr2_1:63127217-63127236 None:intergenic 30.0%
AAACTTGAGTGATGTTGATC+GGG - chr2_1:63121829-63121848 None:intergenic 35.0%
TACTTGATCCAAGAGGAAAA+TGG + chr2_1:63122037-63122056 Msa0216930:CDS 35.0%
ACTTGATCCAAGAGGAAAAT+GGG + chr2_1:63122038-63122057 Msa0216930:CDS 35.0%
AGAGTGCATAGAAGAAAAGT+GGG - chr2_1:63122119-63122138 None:intergenic 35.0%
!!! TGTGTCTGTTTTTAGATGGT+TGG + chr2_1:63122157-63122176 Msa0216930:intron 35.0%
! AAACATAAACGCTCCTCTTT+TGG + chr2_1:63122261-63122280 Msa0216930:CDS 35.0%
ATGATGAATGAAGCCAAAAG+AGG - chr2_1:63122277-63122296 None:intergenic 35.0%
!!! TCTTTTGGCTTCATTCATCA+TGG + chr2_1:63122276-63122295 Msa0216930:CDS 35.0%
AAATAATTACCTGAGGGAGA+GGG - chr2_1:63122368-63122387 None:intergenic 35.0%
TAAATAATTACCTGAGGGAG+AGG - chr2_1:63122369-63122388 None:intergenic 35.0%
CTCCCTCAGGTAATTATTTA+TGG + chr2_1:63122369-63122388 Msa0216930:intron 35.0%
CTCTTATAAATAGGACCGAA+TGG - chr2_1:63122594-63122613 None:intergenic 35.0%
!! GTTTTTCGTTTTTCCCAAAG+TGG + chr2_1:63123069-63123088 Msa0216930:intron 35.0%
GAAACTTAAAGGACCACTTT+GGG - chr2_1:63123085-63123104 None:intergenic 35.0%
TGAAACTTAAAGGACCACTT+TGG - chr2_1:63123086-63123105 None:intergenic 35.0%
CCAACTATGCTATCTACAAT+AGG - chr2_1:63123156-63123175 None:intergenic 35.0%
CCTATTGTAGATAGCATAGT+TGG + chr2_1:63123153-63123172 Msa0216930:intron 35.0%
!! ATCTTTTTAGGCATGGCAAA+TGG + chr2_1:63123241-63123260 Msa0216930:intron 35.0%
CATGTTGCATAATACTGAGT+TGG + chr2_1:63123664-63123683 Msa0216930:intron 35.0%
! AATACTGAGTTGGCAAATGA+AGG + chr2_1:63123674-63123693 Msa0216930:intron 35.0%
TGAAGCTATAAGTGTAATGC+AGG - chr2_1:63123753-63123772 None:intergenic 35.0%
! GACATAAGATGTGTACGTTT+TGG + chr2_1:63123832-63123851 Msa0216930:intron 35.0%
!! CACACTTTTGGAAAACTTGT+TGG + chr2_1:63123903-63123922 Msa0216930:intron 35.0%
! AATGTCTGATTGCTGATTAG+AGG - chr2_1:63123929-63123948 None:intergenic 35.0%
! CTGTTTTGCAGATTGTGTTA+TGG + chr2_1:63124132-63124151 Msa0216930:intron 35.0%
ATTCCATCTTTGTTAGAGCA+AGG + chr2_1:63124161-63124180 Msa0216930:CDS 35.0%
!! CCGAGTGATAAATTTTAGGA+AGG - chr2_1:63124238-63124257 None:intergenic 35.0%
! CAGACCGAGTGATAAATTTT+AGG - chr2_1:63124242-63124261 None:intergenic 35.0%
!!! GTTTCATTTTTGGAACCGTT+TGG + chr2_1:63124288-63124307 Msa0216930:CDS 35.0%
GCAGGGTTTAACAACATTTA+TGG - chr2_1:63124410-63124429 None:intergenic 35.0%
! GTATTTGTTGGGACTTCAAA+GGG + chr2_1:63124541-63124560 Msa0216930:CDS 35.0%
GAAATTAGACAGAACAAGGT+TGG + chr2_1:63124667-63124686 Msa0216930:CDS 35.0%
! AGATACTCCTTCCTATCTTT+TGG + chr2_1:63124804-63124823 Msa0216930:CDS 35.0%
! GATACTCCTTCCTATCTTTT+GGG + chr2_1:63124805-63124824 Msa0216930:CDS 35.0%
! ATACTCCTTCCTATCTTTTG+GGG + chr2_1:63124806-63124825 Msa0216930:CDS 35.0%
GAAAATACCTGAGAGTCATT+AGG - chr2_1:63124832-63124851 None:intergenic 35.0%
! GTGATGATGACTAATGACTA+TGG + chr2_1:63124890-63124909 Msa0216930:intron 35.0%
CGCTCCAAACCTTTATATTA+CGG + chr2_1:63124916-63124935 Msa0216930:intron 35.0%
CGGTAAAATGTGGATAATCA+CGG + chr2_1:63124936-63124955 Msa0216930:intron 35.0%
GTGGATAATCACGGTATTTA+AGG + chr2_1:63124945-63124964 Msa0216930:intron 35.0%
AGGTTGAAATATCATTGCAG+AGG + chr2_1:63124965-63124984 Msa0216930:intron 35.0%
CTTATTGAGCGTGATTATGT+TGG + chr2_1:63125318-63125337 Msa0216930:intron 35.0%
TTCGTGCATTATTTGTACCT+TGG + chr2_1:63125561-63125580 Msa0216930:intron 35.0%
TTGTACCTTGGTTGAAGTTA+AGG + chr2_1:63125573-63125592 Msa0216930:intron 35.0%
CAATTAGCATAGTGACTAGA+AGG - chr2_1:63125734-63125753 None:intergenic 35.0%
CTTCTAGTCACTATGCTAAT+TGG + chr2_1:63125732-63125751 Msa0216930:CDS 35.0%
TTATGCTAGAGATCAAATGC+AGG + chr2_1:63125987-63126006 Msa0216930:intron 35.0%
TTTGACGGGACAAAAATAAG+TGG + chr2_1:63126023-63126042 Msa0216930:intron 35.0%
AACAAAAGACAGTTACCACA+AGG + chr2_1:63126166-63126185 Msa0216930:CDS 35.0%
TCAGTTGATCAAAAATCTCC+CGG + chr2_1:63126255-63126274 Msa0216930:CDS 35.0%
!!! GGTACCACTTTTTCAACATA+TGG + chr2_1:63126402-63126421 Msa0216930:intron 35.0%
AAGTCCCTTGTATTCACAAA+AGG + chr2_1:63126460-63126479 Msa0216930:CDS 35.0%
TGCATACAGTTAACAAGAGA+AGG + chr2_1:63126559-63126578 Msa0216930:intron 35.0%
CAAATAGCATTCTACGAACT+GGG - chr2_1:63126588-63126607 None:intergenic 35.0%
ACAAATAGCATTCTACGAAC+TGG - chr2_1:63126589-63126608 None:intergenic 35.0%
! AGTTCGTAGAATGCTATTTG+TGG + chr2_1:63126588-63126607 Msa0216930:CDS 35.0%
! GTAGAATGCTATTTGTGGTA+AGG + chr2_1:63126593-63126612 Msa0216930:CDS 35.0%
! AGAATGCTATTTGTGGTAAG+GGG + chr2_1:63126595-63126614 Msa0216930:CDS 35.0%
! TTAGGAATTGGCTACTTTGA+AGG - chr2_1:63126624-63126643 None:intergenic 35.0%
TAACTCCATCTCTTAGGAAT+TGG - chr2_1:63126636-63126655 None:intergenic 35.0%
!! AGCTTTTAACTCCATCTCTT+AGG - chr2_1:63126642-63126661 None:intergenic 35.0%
GTTGGAAGACGTTCTATAAA+TGG - chr2_1:63126727-63126746 None:intergenic 35.0%
TCCAACATCATCATCAACTT+TGG + chr2_1:63126741-63126760 Msa0216930:CDS 35.0%
!! ACCAAAGTTGATGATGATGT+TGG - chr2_1:63126745-63126764 None:intergenic 35.0%
TTCAAGTCCAAAAACTTCGA+CGG - chr2_1:63126779-63126798 None:intergenic 35.0%
! AACAAGTGTGCCCTAATTTT+AGG + chr2_1:63126936-63126955 Msa0216930:intron 35.0%
AGTGTTAGATATTACTCACC+TGG + chr2_1:63126989-63127008 Msa0216930:CDS 35.0%
TTAGATATTACTCACCTGGT+TGG + chr2_1:63126993-63127012 Msa0216930:CDS 35.0%
AAAGAAGTAGACCTTGACAA+AGG - chr2_1:63127112-63127131 None:intergenic 35.0%
TTTGTCAAGGTCTACTTCTT+TGG + chr2_1:63127111-63127130 Msa0216930:CDS 35.0%
AAATCATCGACATTAGGCTT+TGG - chr2_1:63127178-63127197 None:intergenic 35.0%
GAGTCAAAATCATCGACATT+AGG - chr2_1:63127184-63127203 None:intergenic 35.0%
TCTTCATAACATCCTGTTTG+TGG + chr2_1:63127202-63127221 Msa0216930:exon 35.0%
AACTTGAGTGATGTTGATCG+GGG - chr2_1:63121828-63121847 None:intergenic 40.0%
! TGAACGTTTTTGTGGCTGTT+TGG - chr2_1:63121995-63122014 None:intergenic 40.0%
! AGGGTATTACTTGATCCAAG+AGG + chr2_1:63122030-63122049 Msa0216930:CDS 40.0%
! TTTTCTTCTGGTGTGTGCAA+TGG + chr2_1:63122080-63122099 Msa0216930:intron 40.0%
TTTCTTCTGGTGTGTGCAAT+GGG + chr2_1:63122081-63122100 Msa0216930:intron 40.0%
! GTGTGCAATGGGTTTATTTG+TGG + chr2_1:63122092-63122111 Msa0216930:intron 40.0%
! GAGAGTGCATAGAAGAAAAG+TGG - chr2_1:63122120-63122139 None:intergenic 40.0%
TGCTTCCTTGAACTCATCTT+TGG + chr2_1:63123180-63123199 Msa0216930:intron 40.0%
TGGTACCAAAGATGAGTTCA+AGG - chr2_1:63123188-63123207 None:intergenic 40.0%
CTCATCTTTGGTACCAAATC+TGG + chr2_1:63123192-63123211 Msa0216930:intron 40.0%
!! TTTTTAGGCATGGCAAATGG+TGG + chr2_1:63123244-63123263 Msa0216930:intron 40.0%
!! CAAGTCTTTTTAGCGGATGA+TGG - chr2_1:63123304-63123323 None:intergenic 40.0%
GATCCTTGCTCTAACAAAGA+TGG - chr2_1:63124167-63124186 None:intergenic 40.0%
!!! TCATTTTTGGAACCGTTTGG+TGG + chr2_1:63124291-63124310 Msa0216930:CDS 40.0%
!!! CATTTTTGGAACCGTTTGGT+GGG + chr2_1:63124292-63124311 Msa0216930:CDS 40.0%
!!! ATTTTTGGAACCGTTTGGTG+GGG + chr2_1:63124293-63124312 Msa0216930:CDS 40.0%
AGGGTCATGTTGGTATTTGT+TGG + chr2_1:63124529-63124548 Msa0216930:CDS 40.0%
GGGTCATGTTGGTATTTGTT+GGG + chr2_1:63124530-63124549 Msa0216930:CDS 40.0%
! GGTATTTGTTGGGACTTCAA+AGG + chr2_1:63124540-63124559 Msa0216930:CDS 40.0%
! TAGACAGAACAAGGTTGGTT+TGG + chr2_1:63124672-63124691 Msa0216930:CDS 40.0%
CGCTCAATAAGCTCACAATA+GGG - chr2_1:63125309-63125328 None:intergenic 40.0%
ACGCTCAATAAGCTCACAAT+AGG - chr2_1:63125310-63125329 None:intergenic 40.0%
TAATGCACGAATCACGTACA+TGG - chr2_1:63125552-63125571 None:intergenic 40.0%
AGCATCCTTAACTTCAACCA+AGG - chr2_1:63125581-63125600 None:intergenic 40.0%
! GTGATGTTGTCAGCACTTTT+GGG + chr2_1:63125643-63125662 Msa0216930:intron 40.0%
TTAGCATAGTGACTAGAAGG+AGG - chr2_1:63125731-63125750 None:intergenic 40.0%
!! GGTATTTCCGATCGATTTGA+CGG + chr2_1:63126008-63126027 Msa0216930:intron 40.0%
!! GTATTTCCGATCGATTTGAC+GGG + chr2_1:63126009-63126028 Msa0216930:intron 40.0%
! TTTTGTCCCGTCAAATCGAT+CGG - chr2_1:63126018-63126037 None:intergenic 40.0%
TGAAGATGACAAACATGGAG+TGG + chr2_1:63126137-63126156 Msa0216930:CDS 40.0%
TAACTACGAGAGACAGTGTT+GGG + chr2_1:63126207-63126226 Msa0216930:CDS 40.0%
TTGATCAAAAATCTCCCGGA+GGG + chr2_1:63126259-63126278 Msa0216930:CDS 40.0%
! GTACCATCTTTGTTTGGGTT+TGG + chr2_1:63126300-63126319 Msa0216930:CDS 40.0%
TCACCAAACCCAAACAAAGA+TGG - chr2_1:63126306-63126325 None:intergenic 40.0%
TGAATACAAGGGACTTGACA+CGG - chr2_1:63126456-63126475 None:intergenic 40.0%
AGTAGCCAATTCCTAAGAGA+TGG + chr2_1:63126628-63126647 Msa0216930:CDS 40.0%
! CTTACAACCGTCGAAGTTTT+TGG + chr2_1:63126769-63126788 Msa0216930:CDS 40.0%
!! CGAAGTTTTTGGACTTGAAG+CGG + chr2_1:63126780-63126799 Msa0216930:CDS 40.0%
!! CAATTCAATTGGCTTGGAGA+AGG + chr2_1:63127035-63127054 Msa0216930:CDS 40.0%
!! AATTGGCTTGGAGAAGGTAT+AGG + chr2_1:63127041-63127060 Msa0216930:CDS 40.0%
! AAGGTCTACTTCTTTGGAAG+AGG + chr2_1:63127117-63127136 Msa0216930:CDS 40.0%
ACTTGAGTGATGTTGATCGG+GGG - chr2_1:63121827-63121846 None:intergenic 45.0%
! TCTTCAGCCCATTTTCCTCT+TGG - chr2_1:63122048-63122067 None:intergenic 45.0%
!! GAGGAAAATGGGCTGAAGAA+TGG + chr2_1:63122049-63122068 Msa0216930:CDS 45.0%
GTAACATGTCCGTCATGCAA+CGG - chr2_1:63122206-63122225 None:intergenic 45.0%
! TGACGGACATGTTACATCTC+TGG + chr2_1:63122211-63122230 Msa0216930:intron 45.0%
!! GGCTTTGTTGGCTTTGAAGA+AGG - chr2_1:63122319-63122338 None:intergenic 45.0%
! AGCGGATGATGGTGATGATT+CGG - chr2_1:63123293-63123312 None:intergenic 45.0%
TAGAGCAAGGATCAATTGCG+CGG + chr2_1:63124174-63124193 Msa0216930:CDS 45.0%
TATATGGTGAAACAGGCAGC+AGG + chr2_1:63124509-63124528 Msa0216930:intron 45.0%
ATATGGTGAAACAGGCAGCA+GGG + chr2_1:63124510-63124529 Msa0216930:intron 45.0%
GAGCAATGTGAGACAACAAC+TGG + chr2_1:63124581-63124600 Msa0216930:CDS 45.0%
TGTGAGACAACAACTGGTTG+TGG + chr2_1:63124587-63124606 Msa0216930:CDS 45.0%
GTGAGACAACAACTGGTTGT+GGG + chr2_1:63124588-63124607 Msa0216930:CDS 45.0%
GGTCACAGAATTCAGAAGCA+AGG + chr2_1:63124693-63124712 Msa0216930:CDS 45.0%
TTAGGCCCCAAAAGATAGGA+AGG - chr2_1:63124814-63124833 None:intergenic 45.0%
GTCATTAGGCCCCAAAAGAT+AGG - chr2_1:63124818-63124837 None:intergenic 45.0%
! GGTGATGTTGTCAGCACTTT+TGG + chr2_1:63125642-63125661 Msa0216930:intron 45.0%
ACCTCCAGAGTACAACAGAA+AGG + chr2_1:63125667-63125686 Msa0216930:CDS 45.0%
TCCTTTCTGTTGTACTCTGG+AGG - chr2_1:63125671-63125690 None:intergenic 45.0%
CCATCCTTTCTGTTGTACTC+TGG - chr2_1:63125674-63125693 None:intergenic 45.0%
CCAGAGTACAACAGAAAGGA+TGG + chr2_1:63125671-63125690 Msa0216930:CDS 45.0%
AGATGACAAACATGGAGTGG+TGG + chr2_1:63126140-63126159 Msa0216930:CDS 45.0%
GACAGTTACCACAAGGACTT+CGG + chr2_1:63126173-63126192 Msa0216930:CDS 45.0%
GTAACTACGAGAGACAGTGT+TGG + chr2_1:63126206-63126225 Msa0216930:CDS 45.0%
GTTGATCAAAAATCTCCCGG+AGG + chr2_1:63126258-63126277 Msa0216930:CDS 45.0%
ATATCCCTTCTCAAACCCTC+CGG - chr2_1:63126277-63126296 None:intergenic 45.0%
!! TTGTTTGGGTTTGGTGAGAC+AGG + chr2_1:63126309-63126328 Msa0216930:CDS 45.0%
AGCTGTTGTATGTTAGGACC+AGG + chr2_1:63126658-63126677 Msa0216930:CDS 45.0%
TTAGGACCAGGAAACTTCAG+TGG + chr2_1:63126670-63126689 Msa0216930:CDS 45.0%
TCATCTCCACTGAAGTTTCC+TGG - chr2_1:63126679-63126698 None:intergenic 45.0%
GTGGAGATGAGCTTCTATCA+TGG + chr2_1:63126689-63126708 Msa0216930:CDS 45.0%
!! AGTTTTTGGACTTGAAGCGG+AGG + chr2_1:63126783-63126802 Msa0216930:CDS 45.0%
CTGTGGCAATTCAATTGGCT+TGG + chr2_1:63127029-63127048 Msa0216930:CDS 45.0%
! CTTGGAGAAGGTATAGGCAT+AGG + chr2_1:63127047-63127066 Msa0216930:CDS 45.0%
TGTCCTTTATTAGGCCTCGT+AGG + chr2_1:63127086-63127105 Msa0216930:CDS 45.0%
! ATCGACATTAGGCTTTGGTG+AGG - chr2_1:63127173-63127192 None:intergenic 45.0%
!! AAGTAAAATAAAAAAATTAA+GGG - chr2_1:63123550-63123569 None:intergenic 5.0%
!! AAAGTAAAATAAAAAAATTA+AGG - chr2_1:63123551-63123570 None:intergenic 5.0%
!! TGTAAAAAATAAAATAAATT+GGG - chr2_1:63126343-63126362 None:intergenic 5.0%
!! TTGTAAAAAATAAAATAAAT+TGG - chr2_1:63126344-63126363 None:intergenic 5.0%
ATCGTCGATGTCATCGTCAG+TGG - chr2_1:63121884-63121903 None:intergenic 50.0%
CGACGATATCGTCAACAACG+AGG + chr2_1:63121897-63121916 Msa0216930:CDS 50.0%
! CATGCAACGGATAACGGTGA+CGG - chr2_1:63122193-63122212 None:intergenic 50.0%
CACCGTTATCCGTTGCATGA+CGG + chr2_1:63122194-63122213 Msa0216930:intron 50.0%
GTCCGTCATGCAACGGATAA+CGG - chr2_1:63122199-63122218 None:intergenic 50.0%
TAATTACCTGAGGGAGAGGG+AGG - chr2_1:63122365-63122384 None:intergenic 50.0%
TGGGTGTTAGGAGCCAGATT+TGG - chr2_1:63123208-63123227 None:intergenic 50.0%
AGAGCAAGGATCAATTGCGC+GGG + chr2_1:63124175-63124194 Msa0216930:CDS 50.0%
GTGCGTCGAAACCTCACAAA+TGG + chr2_1:63124266-63124285 Msa0216930:CDS 50.0%
GATAGCGAATCCCCACCAAA+CGG - chr2_1:63124306-63124325 None:intergenic 50.0%
! TTTGGGGCCTAATGACTCTC+AGG + chr2_1:63124822-63124841 Msa0216930:CDS 50.0%
TATCCCTTCTCAAACCCTCC+GGG - chr2_1:63126276-63126295 None:intergenic 50.0%
!! TGGGTTTGGTGAGACAGGTA+AGG + chr2_1:63126314-63126333 Msa0216930:intron 50.0%
ACTCACCTGGTTGGAGAACT+TGG + chr2_1:63127002-63127021 Msa0216930:CDS 50.0%
CTCACCTGGTTGGAGAACTT+GGG + chr2_1:63127003-63127022 Msa0216930:CDS 50.0%
GGCTGCTGTGGCAATTCAAT+TGG + chr2_1:63127024-63127043 Msa0216930:CDS 50.0%
AGGCCTACGAGGCCTAATAA+AGG - chr2_1:63127092-63127111 None:intergenic 50.0%
CGATAGCGACGAGTACGATG+AGG + chr2_1:63121927-63121946 Msa0216930:CDS 55.0%
AACAGGCAGCAGGGTCATGT+TGG + chr2_1:63124519-63124538 Msa0216930:intron 55.0%
ACATTCATCAACGCCGCGCA+TGG - chr2_1:63126236-63126255 None:intergenic 55.0%
ATCTCCCGGAGGGTTTGAGA+AGG + chr2_1:63126269-63126288 Msa0216930:CDS 55.0%
TCTCCCGGAGGGTTTGAGAA+GGG + chr2_1:63126270-63126289 Msa0216930:CDS 55.0%
TTGGAGAACTTGGGCTGCTG+TGG + chr2_1:63127012-63127031 Msa0216930:CDS 55.0%
GACCTTGACAAAGGCCTACG+AGG - chr2_1:63127103-63127122 None:intergenic 55.0%
TATCCTCCTCCCTCTCCCTC+AGG + chr2_1:63122356-63122375 Msa0216930:CDS 60.0%
TTACCTGAGGGAGAGGGAGG+AGG - chr2_1:63122362-63122381 None:intergenic 60.0%
ACACGCTGCCGAAGTCCTTG+TGG - chr2_1:63126184-63126203 None:intergenic 60.0%
GCAGCCCAAGTTCTCCAACC+AGG - chr2_1:63127010-63127029 None:intergenic 60.0%
GGCCTCGTAGGCCTTTGTCA+AGG + chr2_1:63127098-63127117 Msa0216930:CDS 60.0%
! CAGTGTTGGGCTGCCATGCG+CGG + chr2_1:63126220-63126239 Msa0216930:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 63121820 63127265 63121820 ID=Msa0216930;Name=Msa0216930
chr2_1 mRNA 63121820 63127265 63121820 ID=Msa0216930-mRNA-1;Parent=Msa0216930;Name=Msa0216930-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.87|0.77|1|1|1|9|55|627
chr2_1 exon 63121820 63122089 63121820 ID=Msa0216930-mRNA-1:exon:17541;Parent=Msa0216930-mRNA-1
chr2_1 exon 63122249 63122377 63122249 ID=Msa0216930-mRNA-1:exon:17542;Parent=Msa0216930-mRNA-1
chr2_1 exon 63124143 63124355 63124143 ID=Msa0216930-mRNA-1:exon:17543;Parent=Msa0216930-mRNA-1
chr2_1 exon 63124524 63124843 63124524 ID=Msa0216930-mRNA-1:exon:17544;Parent=Msa0216930-mRNA-1
chr2_1 exon 63125656 63125764 63125656 ID=Msa0216930-mRNA-1:exon:17545;Parent=Msa0216930-mRNA-1
chr2_1 exon 63126094 63126330 63126094 ID=Msa0216930-mRNA-1:exon:17546;Parent=Msa0216930-mRNA-1
chr2_1 exon 63126403 63126489 63126403 ID=Msa0216930-mRNA-1:exon:17547;Parent=Msa0216930-mRNA-1
chr2_1 exon 63126568 63126833 63126568 ID=Msa0216930-mRNA-1:exon:17548;Parent=Msa0216930-mRNA-1
chr2_1 exon 63126958 63127265 63126958 ID=Msa0216930-mRNA-1:exon:17549;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63121820 63122089 63121820 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63122249 63122377 63122249 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63124143 63124355 63124143 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63124524 63124843 63124524 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63125656 63125764 63125656 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63126094 63126330 63126094 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63126403 63126489 63126403 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63126568 63126833 63126568 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 CDS 63126958 63127210 63126958 ID=Msa0216930-mRNA-1:cds;Parent=Msa0216930-mRNA-1
chr2_1 three_prime_UTR 63127211 63127265 63127211 ID=Msa0216930-mRNA-1:three_prime_utr;Parent=Msa0216930-mRNA-1
Gene Sequence

>Msa0216930

ATGGCCCCCGATCAACATCACTCAAGTTTTAATTCAAACATGCAACACTACTATTACAACACCACTGACGATGACATCGACGATATCGTCAACAACGAGGTTGTTAACGATAGCGACGAGTACGATGAGGATGAGTATCAGTATCAGCACGAAGAAGATGAAAAAGAAGAAACCAAACAGCCACAAAAACGTTCATCTTTTTCATTGAGTAGGGTATTACTTGATCCAAGAGGAAAATGGGCTGAAGAATGGAATAGAGTTTTTCTTCTGTTCTATATTCATAAACATAAACGCTCCTCTTTTGGCTTCATTCATCATGGAACTTCTTCTTCTGACTCCTTCTTCAAAGCCAACAAAGCCTTTTTCTTTAACATCTTTATCCTCCTCCCTCTCCCTCAGATTGTGTTATGGGTGACAATTCCATCTTTGTTAGAGCAAGGATCAATTGCGCGGGTGATTTCTGTATTGTTGATTATGTTCCTGTTTCAATACCTTCCTAAAATTTATCACTCGGTCTGCTTCGTGCGTCGAAACCTCACAAATGGTTTCATTTTTGGAACCGTTTGGTGGGGATTCGCTATCAATATGATCGCTTATTTTGTCGCTTCCCATGCAGCAGGGTCATGTTGGTATTTGTTGGGACTTCAAAGGGCAGCAAAGTGTCTAGAAGAGCAATGTGAGACAACAACTGGTTGTGGGCTAAGAACACTATGTTGCAAAGAACCAATATACTATGGAAACTATAACATGTTGAAGAAATTAGACAGAACAAGGTTGGTTTGGTCACAGAATTCAGAAGCAAGGTCTACATGTTTAGCTAGTGCTGATAACTATGAATTTGGAGTTTATGAATGGAGTGTTCAACTTGTTACAAATAATAGCCGAATTGAAAAGATACTCCTTCCTATCTTTTGGGGCCTAATGACTCTCAGCACTTTTGGGAACCTCCAGAGTACAACAGAAAGGATGGAAGTCGTTTTCAACACTATTATATTAACTAGTGGCCTCCTTCTAGTCACTATGCTAATTGGAAACATCAAGGTATTTTTACATGCTACAACATCAAAGAAGCAAGCAATGAAATTGAAGATGACAAACATGGAGTGGTGGATGAACAAAAGACAGTTACCACAAGGACTTCGGCAGCGTGTGCGTAACTACGAGAGACAGTGTTGGGCTGCCATGCGCGGCGTTGATGAATGTCAGTTGATCAAAAATCTCCCGGAGGGTTTGAGAAGGGATATCAAGTACCATCTTTGTTTGGGTTTGGTGAGACAGGTACCACTTTTTCAACATATGGATGAATTGGTGCTAGAGTACATTTGTGACCGTGTCAAGTCCCTTGTATTCACAAAAGGAGAAACATTAACAAGAGAAGGAGACCCAGTTCGTAGAATGCTATTTGTGGTAAGGGGTCACCTTCAAAGTAGCCAATTCCTAAGAGATGGAGTTAAAAGCTGTTGTATGTTAGGACCAGGAAACTTCAGTGGAGATGAGCTTCTATCATGGTGTTTAAGAAGGCCATTTATAGAACGTCTTCCAACATCATCATCAACTTTGGTGACACTTACAACCGTCGAAGTTTTTGGACTTGAAGCGGAGGATGTCAAATATGTGACGCAAAATTTTAGGTACACATTTGCAAAAGAAAATGTTAGAAGAAGTGTTAGATATTACTCACCTGGTTGGAGAACTTGGGCTGCTGTGGCAATTCAATTGGCTTGGAGAAGGTATAGGCATAGGTTGACCTTGAATTCTTTGTCCTTTATTAGGCCTCGTAGGCCTTTGTCAAGGTCTACTTCTTTGGAAGAGGATAGACTTCGTCTCTATACAGCTTTGCTAACCTCACCAAAGCCTAATGTCGATGATTTTGACTCTTCATAA
Protein sequence

>Msa0216930

MAPDQHHSSFNSNMQHYYYNTTDDDIDDIVNNEVVNDSDEYDEDEYQYQHEEDEKEETKQPQKRSSFSLSRVLLDPRGKWAEEWNRVFLLFYIHKHKRSSFGFIHHGTSSSDSFFKANKAFFFNIFILLPLPQIVLWVTIPSLLEQGSIARVISVLLIMFLFQYLPKIYHSVCFVRRNLTNGFIFGTVWWGFAINMIAYFVASHAAGSCWYLLGLQRAAKCLEEQCETTTGCGLRTLCCKEPIYYGNYNMLKKLDRTRLVWSQNSEARSTCLASADNYEFGVYEWSVQLVTNNSRIEKILLPIFWGLMTLSTFGNLQSTTERMEVVFNTIILTSGLLLVTMLIGNIKVFLHATTSKKQAMKLKMTNMEWWMNKRQLPQGLRQRVRNYERQCWAAMRGVDECQLIKNLPEGLRRDIKYHLCLGLVRQVPLFQHMDELVLEYICDRVKSLVFTKGETLTREGDPVRRMLFVVRGHLQSSQFLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPTSSSTLVTLTTVEVFGLEAEDVKYVTQNFRYTFAKENVRRSVRYYSPGWRTWAAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRSTSLEEDRLRLYTALLTSPKPNVDDFDSS*