Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220930 | XP_013465155.1 | 96.958 | 263 | 8 | 0 | 1 | 263 | 74 | 336 | 0.0 | 529 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220930 | sp|P25685|DNJB1_HUMAN | 47.200 | 250 | 116 | 4 | 27 | 261 | 90 | 338 | 2.77e-67 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220930 | A0A072VM07 | 96.958 | 263 | 8 | 0 | 1 | 263 | 74 | 336 | 0.0 | 529 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0220930 | Msa0262370 | 0.832526 | 8.988709e-56 | -8.615850e-47 |
| Msa0220930 | Msa0300150 | 0.816507 | 5.336191e-52 | -8.615850e-47 |
| Msa0220930 | Msa0337590 | 0.858122 | 1.022955e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220930 | MtrunA17_Chr2g0324921 | 96.958 | 263 | 8 | 0 | 1 | 263 | 74 | 336 | 0.0 | 529 |
| Msa0220930 | MtrunA17_Chr4g0040501 | 64.769 | 281 | 70 | 5 | 1 | 262 | 74 | 344 | 7.18e-123 | 353 |
| Msa0220930 | MtrunA17_Chr2g0282741 | 63.406 | 276 | 77 | 4 | 1 | 262 | 74 | 339 | 7.50e-114 | 330 |
| Msa0220930 | MtrunA17_Chr4g0006391 | 58.696 | 276 | 92 | 6 | 1 | 263 | 74 | 340 | 3.11e-103 | 303 |
| Msa0220930 | MtrunA17_Chr2g0282761 | 54.286 | 245 | 92 | 3 | 29 | 255 | 97 | 339 | 1.19e-85 | 259 |
| Msa0220930 | MtrunA17_Chr3g0138471 | 51.429 | 245 | 108 | 3 | 28 | 263 | 85 | 327 | 1.02e-78 | 241 |
| Msa0220930 | MtrunA17_Chr3g0093111 | 44.017 | 234 | 106 | 1 | 29 | 262 | 103 | 311 | 4.18e-66 | 208 |
| Msa0220930 | MtrunA17_Chr5g0415751 | 59.310 | 145 | 59 | 0 | 117 | 261 | 16 | 160 | 2.39e-58 | 183 |
| Msa0220930 | MtrunA17_Chr3g0124801 | 44.693 | 179 | 98 | 1 | 84 | 261 | 113 | 291 | 8.93e-51 | 168 |
| Msa0220930 | MtrunA17_Chr2g0277721 | 42.778 | 180 | 102 | 1 | 83 | 261 | 80 | 259 | 3.05e-47 | 158 |
| Msa0220930 | MtrunA17_Chr2g0322181 | 40.690 | 145 | 84 | 1 | 119 | 261 | 214 | 358 | 2.79e-29 | 114 |
| Msa0220930 | MtrunA17_Chr4g0025401 | 40.690 | 145 | 84 | 1 | 119 | 261 | 212 | 356 | 1.87e-28 | 112 |
| Msa0220930 | MtrunA17_Chr3g0091351 | 49.000 | 100 | 50 | 1 | 147 | 245 | 2 | 101 | 2.39e-26 | 99.0 |
| Msa0220930 | MtrunA17_Chr8g0334811 | 39.456 | 147 | 85 | 2 | 119 | 261 | 216 | 362 | 5.38e-25 | 102 |
| Msa0220930 | MtrunA17_Chr7g0269841 | 33.974 | 156 | 100 | 2 | 108 | 261 | 189 | 343 | 2.64e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220930 | AT2G20560.1 | 67.658 | 269 | 73 | 3 | 1 | 261 | 74 | 336 | 3.95e-114 | 331 |
| Msa0220930 | AT4G28480.1 | 64.388 | 278 | 78 | 6 | 1 | 261 | 74 | 347 | 1.21e-103 | 305 |
| Msa0220930 | AT3G08910.1 | 62.128 | 235 | 83 | 3 | 29 | 263 | 94 | 322 | 3.56e-100 | 295 |
| Msa0220930 | AT5G01390.1 | 57.261 | 241 | 94 | 2 | 29 | 262 | 96 | 334 | 5.05e-95 | 283 |
| Msa0220930 | AT2G20550.1 | 58.242 | 273 | 85 | 4 | 11 | 261 | 18 | 283 | 6.65e-93 | 275 |
| Msa0220930 | AT2G20550.2 | 58.242 | 273 | 85 | 4 | 11 | 261 | 18 | 283 | 6.65e-93 | 275 |
| Msa0220930 | AT5G25530.1 | 48.763 | 283 | 101 | 5 | 5 | 263 | 85 | 347 | 2.48e-86 | 261 |
| Msa0220930 | AT5G25530.2 | 48.763 | 283 | 101 | 5 | 5 | 263 | 77 | 339 | 2.52e-86 | 261 |
| Msa0220930 | AT3G47940.1 | 53.333 | 240 | 110 | 1 | 24 | 263 | 111 | 348 | 6.19e-82 | 250 |
| Msa0220930 | AT1G10350.1 | 46.667 | 270 | 129 | 4 | 8 | 263 | 80 | 348 | 3.94e-78 | 240 |
| Msa0220930 | AT1G59725.1 | 53.191 | 235 | 105 | 2 | 29 | 263 | 101 | 330 | 5.07e-78 | 239 |
| Msa0220930 | AT4G28480.2 | 77.857 | 140 | 31 | 0 | 122 | 261 | 150 | 289 | 8.40e-77 | 235 |
| Msa0220930 | AT5G01390.2 | 49.145 | 234 | 66 | 3 | 29 | 262 | 96 | 276 | 9.59e-69 | 214 |
| Msa0220930 | AT1G44160.1 | 46.629 | 178 | 95 | 0 | 84 | 261 | 176 | 353 | 1.58e-50 | 169 |
| Msa0220930 | AT1G11040.1 | 40.331 | 181 | 108 | 0 | 81 | 261 | 252 | 432 | 3.12e-46 | 160 |
| Msa0220930 | AT5G01390.3 | 37.607 | 234 | 54 | 4 | 29 | 262 | 96 | 237 | 5.74e-39 | 136 |
| Msa0220930 | AT3G44110.1 | 40.000 | 145 | 85 | 1 | 119 | 261 | 214 | 358 | 1.08e-27 | 110 |
| Msa0220930 | AT5G22060.1 | 40.690 | 145 | 84 | 1 | 119 | 261 | 215 | 359 | 1.23e-27 | 110 |
| Msa0220930 | AT3G62600.1 | 35.669 | 157 | 98 | 2 | 108 | 262 | 191 | 346 | 2.20e-20 | 89.4 |
| Msa0220930 | AT3G44110.2 | 39.130 | 115 | 68 | 1 | 119 | 231 | 214 | 328 | 7.61e-20 | 87.8 |
| Msa0220930 | AT5G01390.4 | 45.098 | 102 | 47 | 2 | 29 | 123 | 96 | 195 | 1.10e-17 | 80.1 |
Find 89 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTTTGTTGGATCCTT+TGG | 0.129787 | 2_1:+69411693 | None:intergenic |
| CTCAAGTTTCCCTTCTTTGT+TGG | 0.262625 | 2_1:+69411684 | None:intergenic |
| ATATCAGCAGGTATGGTATT+TGG | 0.272102 | 2_1:+69411924 | None:intergenic |
| CCTTCTTTGTTGGATCCTTT+GGG | 0.278902 | 2_1:+69411694 | None:intergenic |
| TCTCTTGAGGATATATATAA+AGG | 0.310218 | 2_1:-69414034 | Msa0220930:CDS |
| TGGATGTTCATTTCCCTTCT+CGG | 0.321746 | 2_1:+69411944 | None:intergenic |
| ATTGCCTCCTGTCAAGATTA+TGG | 0.339096 | 2_1:+69411518 | None:intergenic |
| AATTAATATCTTACTTTATC+CGG | 0.346786 | 2_1:+69411590 | None:intergenic |
| GGGAGTGGCATTCCTTCTCT+TGG | 0.354044 | 2_1:+69411714 | None:intergenic |
| AGAGGTAGCAATGGCATGTT+TGG | 0.355428 | 2_1:-69414145 | Msa0220930:CDS |
| GGTGATCTTCATCTTCTTAG+TGG | 0.355739 | 2_1:+69414009 | None:intergenic |
| GGATGTTCATTTCCCTTCTC+GGG | 0.357845 | 2_1:+69411945 | None:intergenic |
| GGATAAAGTAAGATATTAAT+TGG | 0.358970 | 2_1:-69411588 | Msa0220930:exon |
| TAATCTTGACAGGAGGCAAT+TGG | 0.388489 | 2_1:-69411515 | None:intergenic |
| CTACCAGAGGCATGAGAATC+AGG | 0.390225 | 2_1:+69414292 | None:intergenic |
| TTTGTCCCCTTCTTCCATCC+AGG | 0.403890 | 2_1:+69411978 | None:intergenic |
| GGAATGGGAGGGATGGGAAG+AGG | 0.407566 | 2_1:-69414163 | Msa0220930:CDS |
| CGAAATCCCTTTGGTGGAAT+GGG | 0.411716 | 2_1:-69414178 | Msa0220930:CDS |
| CATAGCAACTTGTTCTCAAT+AGG | 0.424637 | 2_1:+69414058 | None:intergenic |
| GTGAATCTCACTACACTTGA+TGG | 0.443477 | 2_1:-69411795 | Msa0220930:CDS |
| TTTGGGGATCGAAATCCCTT+TGG | 0.447674 | 2_1:-69414187 | Msa0220930:CDS |
| GATTCTCATGCCTCTGGTAG+TGG | 0.458632 | 2_1:-69414289 | Msa0220930:CDS |
| TCGAAATCCCTTTGGTGGAA+TGG | 0.459463 | 2_1:-69414179 | Msa0220930:CDS |
| TCTCTTGCAGAAGCCTTAGT+TGG | 0.462639 | 2_1:-69411825 | Msa0220930:CDS |
| TTTGTTGGATCCTTTGGGAG+TGG | 0.464104 | 2_1:+69411699 | None:intergenic |
| AACTGATACGGAAAGTCATC+AGG | 0.465543 | 2_1:+69414247 | None:intergenic |
| CTCTTGAGGATATATATAAA+GGG | 0.467907 | 2_1:-69414033 | Msa0220930:CDS |
| GATCCGAAGTGAGCCGAGTT+GGG | 0.468185 | 2_1:+69411640 | None:intergenic |
| CCCAAAGGATCCAACAAAGA+AGG | 0.480916 | 2_1:-69411694 | Msa0220930:CDS |
| GGGGATCGAAATCCCTTTGG+TGG | 0.482474 | 2_1:-69414184 | Msa0220930:CDS |
| TAGATTACCATAATCTTGAC+AGG | 0.489863 | 2_1:-69411525 | Msa0220930:three_prime_UTR |
| GTCAAACCTGGATGGAAGAA+GGG | 0.491815 | 2_1:-69411984 | Msa0220930:CDS |
| GAAAATGATATCAGCAGGTA+TGG | 0.491993 | 2_1:+69411917 | None:intergenic |
| TATGGTGATGCTGGAGGAAG+TGG | 0.494603 | 2_1:-69414118 | Msa0220930:CDS |
| TGTTGTTCATCCTGAGTATG+AGG | 0.496005 | 2_1:-69411745 | Msa0220930:CDS |
| TGATCCGAAGTGAGCCGAGT+TGG | 0.497615 | 2_1:+69411639 | None:intergenic |
| ACTGTGATCAAGAATTTCTC+TGG | 0.501571 | 2_1:+69413988 | None:intergenic |
| CTTTGGTGGAATGGGAGGGA+TGG | 0.502219 | 2_1:-69414170 | Msa0220930:CDS |
| TTTGGTGGAATGGGAGGGAT+GGG | 0.503447 | 2_1:-69414169 | Msa0220930:CDS |
| TGTCAAACCTGGATGGAAGA+AGG | 0.504580 | 2_1:-69411985 | Msa0220930:CDS |
| TTTGGATCCTATGGTGATGC+TGG | 0.505971 | 2_1:-69414127 | Msa0220930:CDS |
| ATCCCTCCCATTCCACCAAA+GGG | 0.515203 | 2_1:+69414172 | None:intergenic |
| GTCCGATGATTGAACTGATA+CGG | 0.527889 | 2_1:+69414235 | None:intergenic |
| CCACCTGATTCTCATGCCTC+TGG | 0.530969 | 2_1:-69414295 | Msa0220930:CDS |
| AATGGCATGTTTGGATCCTA+TGG | 0.531436 | 2_1:-69414136 | Msa0220930:CDS |
| ATTCACTGTACAACCAACTA+AGG | 0.541106 | 2_1:+69411812 | None:intergenic |
| ATGATGAAAATGATATCAGC+AGG | 0.541292 | 2_1:+69411912 | None:intergenic |
| GCATGAGAATCAGGTGGTGG+TGG | 0.542892 | 2_1:+69414301 | None:intergenic |
| TCGGCTCACTTCGGATCAGA+AGG | 0.545186 | 2_1:-69411634 | Msa0220930:CDS |
| AAAGATCACTTTCCCCGAGA+AGG | 0.545291 | 2_1:-69411958 | Msa0220930:CDS |
| CATCCCTCCCATTCCACCAA+AGG | 0.550801 | 2_1:+69414171 | None:intergenic |
| CTCACTTCGGATCAGAAGGC+AGG | 0.551807 | 2_1:-69411630 | Msa0220930:CDS |
| TTCCGTATCAGTTCAATCAT+CGG | 0.556341 | 2_1:-69414237 | Msa0220930:CDS |
| GGAACAACCTCCTCATACTC+AGG | 0.557628 | 2_1:+69411735 | None:intergenic |
| GTGCAGCAAAGTCACATCGC+TGG | 0.559149 | 2_1:-69412027 | Msa0220930:intron |
| GCATCAAGGTCCTCCTCGTA+AGG | 0.559593 | 2_1:-69414086 | Msa0220930:CDS |
| AAGATCACTTTCCCCGAGAA+GGG | 0.565073 | 2_1:-69411957 | Msa0220930:CDS |
| CACAATGTGTTCACTCGTGA+AGG | 0.567306 | 2_1:-69411876 | Msa0220930:CDS |
| CCAAAGGATCCAACAAAGAA+GGG | 0.568075 | 2_1:-69411693 | Msa0220930:CDS |
| AGCAACTTGTTCTCAATAGG+AGG | 0.568821 | 2_1:+69414061 | None:intergenic |
| AATCCCTTTGGTGGAATGGG+AGG | 0.575318 | 2_1:-69414175 | Msa0220930:CDS |
| CAATTAGTGTCAAACCTGGA+TGG | 0.581052 | 2_1:-69411992 | Msa0220930:CDS |
| ATTCCCAACTCGGCTCACTT+CGG | 0.581525 | 2_1:-69411643 | Msa0220930:CDS |
| GAGAAATTCTTGATCACAGT+GGG | 0.581668 | 2_1:-69413985 | Msa0220930:intron |
| GGCAGGAATGAAGAAAGTCT+TGG | 0.582326 | 2_1:-69411613 | Msa0220930:CDS |
| TCACGAGTGAACACATTGTG+TGG | 0.583017 | 2_1:+69411879 | None:intergenic |
| ACTTCCTCCAGCATCACCAT+AGG | 0.584524 | 2_1:+69414120 | None:intergenic |
| TTGACAATTAGTGTCAAACC+TGG | 0.594845 | 2_1:-69411996 | Msa0220930:CDS |
| AGTGGAGTCAATGTGCATCA+AGG | 0.595190 | 2_1:-69414100 | Msa0220930:CDS |
| TCTCATGCCTCTGGTAGTGG+TGG | 0.595916 | 2_1:-69414286 | Msa0220930:CDS |
| ATCCCTTTGGTGGAATGGGA+GGG | 0.596841 | 2_1:-69414174 | Msa0220930:CDS |
| GGAATGAAGAAAGTCTTGGC+CGG | 0.608122 | 2_1:-69411609 | Msa0220930:CDS |
| GAGGAGGTTGTTCCAAGAGA+AGG | 0.609654 | 2_1:-69411726 | Msa0220930:CDS |
| GAGGCATGAGAATCAGGTGG+TGG | 0.609693 | 2_1:+69414298 | None:intergenic |
| AGAAGGAATGCCACTCCCAA+AGG | 0.611731 | 2_1:-69411709 | Msa0220930:CDS |
| GATGTTCATTTCCCTTCTCG+GGG | 0.615186 | 2_1:+69411946 | None:intergenic |
| TCAAACCTGGATGGAAGAAG+GGG | 0.618407 | 2_1:-69411983 | Msa0220930:CDS |
| TCAATAGGAGGCGCCTTACG+AGG | 0.622058 | 2_1:+69414073 | None:intergenic |
| TCAACGTCAAATTCCCAACT+CGG | 0.622716 | 2_1:-69411653 | Msa0220930:CDS |
| CAAGTTGCTATGTTCTCTTG+AGG | 0.636918 | 2_1:-69414047 | Msa0220930:CDS |
| GGGATGGGAAGAGGTAGCAA+TGG | 0.641843 | 2_1:-69414154 | Msa0220930:CDS |
| CAACAAAGAAGGGAAACTTG+AGG | 0.650514 | 2_1:-69411683 | Msa0220930:CDS |
| GGATCCTATGGTGATGCTGG+AGG | 0.665018 | 2_1:-69414124 | Msa0220930:CDS |
| ATTACCATAATCTTGACAGG+AGG | 0.665326 | 2_1:-69411522 | Msa0220930:three_prime_UTR |
| ATAGGAGGCGCCTTACGAGG+AGG | 0.673195 | 2_1:+69414076 | None:intergenic |
| TCTACTACCACCACTACCAG+AGG | 0.706463 | 2_1:+69414279 | None:intergenic |
| CCAGAGGCATGAGAATCAGG+TGG | 0.707871 | 2_1:+69414295 | None:intergenic |
| TGTTCATCCTGAGTATGAGG+AGG | 0.716066 | 2_1:-69411742 | Msa0220930:CDS |
| AGAGAAATTCTTGATCACAG+TGG | 0.741173 | 2_1:-69413986 | Msa0220930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAACTTTTTTTTTTTTTT+TGG | - | chr2_1:69412737-69412756 | Msa0220930:intron | 10.0% |
| !!! | AGAACTTTTTTTTTTTTTTT+GGG | - | chr2_1:69412738-69412757 | Msa0220930:intron | 10.0% |
| !!! | ATTTAAAATTTTGAAAAAGT+GGG | + | chr2_1:69412900-69412919 | None:intergenic | 10.0% |
| !!! | AATTTAAAATTTTGAAAAAG+TGG | + | chr2_1:69412901-69412920 | None:intergenic | 10.0% |
| !! | TATAAATATCTAATAACTGA+TGG | + | chr2_1:69411926-69411945 | None:intergenic | 15.0% |
| !! | TAAACAATTACTATAATTCT+AGG | + | chr2_1:69412584-69412603 | None:intergenic | 15.0% |
| !! | TATAAATCAACATTATGATA+TGG | + | chr2_1:69413145-69413164 | None:intergenic | 15.0% |
| !! | AATTAATATCTTACTTTATC+CGG | + | chr2_1:69414247-69414266 | None:intergenic | 15.0% |
| !!! | ATATTTTTGCTGAGTTTTTT+GGG | - | chr2_1:69411630-69411649 | Msa0220930:CDS | 20.0% |
| !! | TCATAATATTAGATAGATAG+TGG | - | chr2_1:69412134-69412153 | Msa0220930:intron | 20.0% |
| !! | CATAATATTAGATAGATAGT+GGG | - | chr2_1:69412135-69412154 | Msa0220930:intron | 20.0% |
| !! | ATAATATTAGATAGATAGTG+GGG | - | chr2_1:69412136-69412155 | Msa0220930:intron | 20.0% |
| !! | GTTCTATTAGAAAAAATTCA+AGG | + | chr2_1:69412723-69412742 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTTTTTTGGGT+AGG | - | chr2_1:69412742-69412761 | Msa0220930:intron | 20.0% |
| !! | TTGATTTATAGTAGTATGTT+TGG | - | chr2_1:69413155-69413174 | Msa0220930:intron | 20.0% |
| !! | TGATTTATAGTAGTATGTTT+GGG | - | chr2_1:69413156-69413175 | Msa0220930:intron | 20.0% |
| !! | TTTAATGTTGCAAATTACAA+TGG | - | chr2_1:69413400-69413419 | Msa0220930:intron | 20.0% |
| !!! | TTGATGTTTTTCTAGTATAA+TGG | - | chr2_1:69413625-69413644 | Msa0220930:intron | 20.0% |
| !! | ATTCTAGATGTTTAAATTAG+AGG | + | chr2_1:69413678-69413697 | None:intergenic | 20.0% |
| !! | AAAAAACAAAGTCATCAATA+GGG | + | chr2_1:69413773-69413792 | None:intergenic | 20.0% |
| !! | AAAAAAACAAAGTCATCAAT+AGG | + | chr2_1:69413774-69413793 | None:intergenic | 20.0% |
| !! | GGATAAAGTAAGATATTAAT+TGG | - | chr2_1:69414246-69414265 | Msa0220930:CDS | 20.0% |
| !!! | GATATTTTTGCTGAGTTTTT+TGG | - | chr2_1:69411629-69411648 | Msa0220930:CDS | 25.0% |
| !!! | TATTTTTGCTGAGTTTTTTG+GGG | - | chr2_1:69411631-69411650 | Msa0220930:CDS | 25.0% |
| ! | TCTCTTGAGGATATATATAA+AGG | - | chr2_1:69411800-69411819 | Msa0220930:CDS | 25.0% |
| ! | CTCTTGAGGATATATATAAA+GGG | - | chr2_1:69411801-69411820 | Msa0220930:CDS | 25.0% |
| !! | TAATATTAGATAGATAGTGG+GGG | - | chr2_1:69412137-69412156 | Msa0220930:intron | 25.0% |
| ! | TAATGAGTTGTATCGAAATA+TGG | - | chr2_1:69412343-69412362 | Msa0220930:intron | 25.0% |
| ! | TTGTATCGAAATATGGTTTA+TGG | - | chr2_1:69412350-69412369 | Msa0220930:intron | 25.0% |
| ! | GAACCATCAATACTTAAAAT+TGG | + | chr2_1:69412658-69412677 | None:intergenic | 25.0% |
| ! | CGAGTTATATTGGTATAAAT+TGG | - | chr2_1:69412998-69413017 | Msa0220930:intron | 25.0% |
| ! | GATTTATAGTAGTATGTTTG+GGG | - | chr2_1:69413157-69413176 | Msa0220930:intron | 25.0% |
| ! | ATTTATAGTAGTATGTTTGG+GGG | - | chr2_1:69413158-69413177 | Msa0220930:intron | 25.0% |
| !!! | TCTGGTTTTTGAGATTATAT+TGG | - | chr2_1:69413285-69413304 | Msa0220930:intron | 25.0% |
| ! | TTGTAACATTAAACAAGAGA+AGG | + | chr2_1:69413490-69413509 | None:intergenic | 25.0% |
| !! | TCTCTTGTTTAATGTTACAA+CGG | - | chr2_1:69413490-69413509 | Msa0220930:intron | 25.0% |
| !! | TTTAAACTGTTGTTATTGCT+AGG | - | chr2_1:69413598-69413617 | Msa0220930:intron | 25.0% |
| !! | TTAAACTGTTGTTATTGCTA+GGG | - | chr2_1:69413599-69413618 | Msa0220930:intron | 25.0% |
| ! | GATATTAATACAGACTAACA+TGG | + | chr2_1:69413656-69413675 | None:intergenic | 25.0% |
| AACTCAGCAAAAATATCATC+AGG | + | chr2_1:69411626-69411645 | None:intergenic | 30.0% | |
| ! | ACAGCATTGAAAAAAGAACT+AGG | + | chr2_1:69411895-69411914 | None:intergenic | 30.0% |
| ATTGCTGAGATTTACATGTT+TGG | - | chr2_1:69411985-69412004 | Msa0220930:CDS | 30.0% | |
| ! | TGTAGCATTTCTAGATTTAC+AGG | - | chr2_1:69412022-69412041 | Msa0220930:CDS | 30.0% |
| TAGAAAAGATTGTGGGAAAT+AGG | - | chr2_1:69412172-69412191 | Msa0220930:intron | 30.0% | |
| AAGTATTATCTCACTTAGTG+GGG | + | chr2_1:69412399-69412418 | None:intergenic | 30.0% | |
| CAAGTATTATCTCACTTAGT+GGG | + | chr2_1:69412400-69412419 | None:intergenic | 30.0% | |
| ACAAGTATTATCTCACTTAG+TGG | + | chr2_1:69412401-69412420 | None:intergenic | 30.0% | |
| TGGATGAAATAGCAAAAACA+TGG | + | chr2_1:69412460-69412479 | None:intergenic | 30.0% | |
| ATCTGCTTCTTTATTGAAAG+AGG | - | chr2_1:69412551-69412570 | Msa0220930:intron | 30.0% | |
| ATACTTAAAATTGGAGGAAG+AGG | + | chr2_1:69412649-69412668 | None:intergenic | 30.0% | |
| CCATCAATACTTAAAATTGG+AGG | + | chr2_1:69412655-69412674 | None:intergenic | 30.0% | |
| !!! | CCTCCAATTTTAAGTATTGA+TGG | - | chr2_1:69412652-69412671 | Msa0220930:intron | 30.0% |
| AAACATTCAATCTAACGTGT+CGG | + | chr2_1:69412815-69412834 | None:intergenic | 30.0% | |
| CAATATAACTCGCTTCATAT+CGG | + | chr2_1:69412990-69413009 | None:intergenic | 30.0% | |
| ATAGACAATAAGTAGCTTCT+TGG | - | chr2_1:69413085-69413104 | Msa0220930:intron | 30.0% | |
| AATACTAGATTTGTGATGCT+TGG | - | chr2_1:69413187-69413206 | Msa0220930:intron | 30.0% | |
| TGTCATAAAGTTTATGTCTC+TGG | - | chr2_1:69413267-69413286 | Msa0220930:intron | 30.0% | |
| TTGCAACATTAAACAAGAGA+AGG | + | chr2_1:69413393-69413412 | None:intergenic | 30.0% | |
| TTAAACAAGAGAAGGACAAT+GGG | + | chr2_1:69413482-69413501 | None:intergenic | 30.0% | |
| ATTAAACAAGAGAAGGACAA+TGG | + | chr2_1:69413483-69413502 | None:intergenic | 30.0% | |
| ! | AACATCTAGAATTCGAGATA+AGG | - | chr2_1:69413686-69413705 | Msa0220930:intron | 30.0% |
| ! | ACATCTAGAATTCGAGATAA+GGG | - | chr2_1:69413687-69413706 | Msa0220930:intron | 30.0% |
| ATGCATGATATCTCTCATTA+TGG | - | chr2_1:69413726-69413745 | Msa0220930:intron | 30.0% | |
| ATGATGAAAATGATATCAGC+AGG | + | chr2_1:69413925-69413944 | None:intergenic | 30.0% | |
| TAGATTACCATAATCTTGAC+AGG | - | chr2_1:69414309-69414328 | Msa0220930:CDS | 30.0% | |
| TTCCGTATCAGTTCAATCAT+CGG | - | chr2_1:69411597-69411616 | Msa0220930:exon | 35.0% | |
| ! | CATAGCAACTTGTTCTCAAT+AGG | + | chr2_1:69411779-69411798 | None:intergenic | 35.0% |
| ACTGTGATCAAGAATTTCTC+TGG | + | chr2_1:69411849-69411868 | None:intergenic | 35.0% | |
| AGAGAAATTCTTGATCACAG+TGG | - | chr2_1:69411848-69411867 | Msa0220930:CDS | 35.0% | |
| GAGAAATTCTTGATCACAGT+GGG | - | chr2_1:69411849-69411868 | Msa0220930:CDS | 35.0% | |
| CATTGAAAAAAGAACTAGGC+AGG | + | chr2_1:69411891-69411910 | None:intergenic | 35.0% | |
| AAAGTAGCTCAGTTTCAGTT+TGG | - | chr2_1:69411949-69411968 | Msa0220930:CDS | 35.0% | |
| TAATTGGAGAAGAGACTGAT+TGG | - | chr2_1:69412074-69412093 | Msa0220930:intron | 35.0% | |
| ACCCATAGTAGAAAAGATTG+TGG | - | chr2_1:69412164-69412183 | Msa0220930:intron | 35.0% | |
| ! | CCCACAATCTTTTCTACTAT+GGG | + | chr2_1:69412168-69412187 | None:intergenic | 35.0% |
| CCCATAGTAGAAAAGATTGT+GGG | - | chr2_1:69412165-69412184 | Msa0220930:intron | 35.0% | |
| ! | TCCCACAATCTTTTCTACTA+TGG | + | chr2_1:69412169-69412188 | None:intergenic | 35.0% |
| ACCTGTACTGTAGATTATGT+AGG | - | chr2_1:69412224-69412243 | Msa0220930:intron | 35.0% | |
| TCCTACATAATCTACAGTAC+AGG | + | chr2_1:69412228-69412247 | None:intergenic | 35.0% | |
| GTACTGTAGATTATGTAGGA+AGG | - | chr2_1:69412228-69412247 | Msa0220930:intron | 35.0% | |
| TTAAAATTGGAGGAAGAGGA+AGG | + | chr2_1:69412645-69412664 | None:intergenic | 35.0% | |
| GTGTGACATGTATCACTATA+TGG | - | chr2_1:69412844-69412863 | Msa0220930:intron | 35.0% | |
| TGTCTATGTCAATGCTTCAT+AGG | - | chr2_1:69412955-69412974 | Msa0220930:intron | 35.0% | |
| CAATGCTTCATAGGTTAACA+TGG | - | chr2_1:69412964-69412983 | Msa0220930:intron | 35.0% | |
| CGATATGAAGCGAGTTATAT+TGG | - | chr2_1:69412988-69413007 | Msa0220930:intron | 35.0% | |
| TCCTATTTCATTACAGTCCA+GGG | - | chr2_1:69413308-69413327 | Msa0220930:intron | 35.0% | |
| TGTTGCAAATTACAATGGCT+TGG | - | chr2_1:69413405-69413424 | Msa0220930:intron | 35.0% | |
| !! | ATGGCTTGGTGTTTGTTAAA+CGG | - | chr2_1:69413419-69413438 | Msa0220930:intron | 35.0% |
| TAAACAAGAGAAGGACAATG+GGG | + | chr2_1:69413481-69413500 | None:intergenic | 35.0% | |
| TGTTTAATGTTACAACGGCT+TGG | - | chr2_1:69413495-69413514 | Msa0220930:intron | 35.0% | |
| TGTTAAACGGGATCAATAAC+TGG | - | chr2_1:69413432-69413451 | Msa0220930:intron | 35.0% | |
| TCCCAAACAATATGCACAAT+GGG | + | chr2_1:69413572-69413591 | None:intergenic | 35.0% | |
| ATCCCAAACAATATGCACAA+TGG | + | chr2_1:69413573-69413592 | None:intergenic | 35.0% | |
| ATTGTGCATATTGTTTGGGA+TGG | - | chr2_1:69413572-69413591 | Msa0220930:intron | 35.0% | |
| TTGACAATTAGTGTCAAACC+TGG | - | chr2_1:69413838-69413857 | Msa0220930:intron | 35.0% | |
| ATATCAGCAGGTATGGTATT+TGG | + | chr2_1:69413913-69413932 | None:intergenic | 35.0% | |
| GAAAATGATATCAGCAGGTA+TGG | + | chr2_1:69413920-69413939 | None:intergenic | 35.0% | |
| ATTCACTGTACAACCAACTA+AGG | + | chr2_1:69414025-69414044 | None:intergenic | 35.0% | |
| ATTACCATAATCTTGACAGG+AGG | - | chr2_1:69414312-69414331 | Msa0220930:CDS | 35.0% | |
| AACTGATACGGAAAGTCATC+AGG | + | chr2_1:69411590-69411609 | None:intergenic | 40.0% | |
| GTCCGATGATTGAACTGATA+CGG | + | chr2_1:69411602-69411621 | None:intergenic | 40.0% | |
| AATGGCATGTTTGGATCCTA+TGG | - | chr2_1:69411698-69411717 | Msa0220930:CDS | 40.0% | |
| ! | AGCAACTTGTTCTCAATAGG+AGG | + | chr2_1:69411776-69411795 | None:intergenic | 40.0% |
| CAAGTTGCTATGTTCTCTTG+AGG | - | chr2_1:69411787-69411806 | Msa0220930:CDS | 40.0% | |
| GGTGATCTTCATCTTCTTAG+TGG | + | chr2_1:69411828-69411847 | None:intergenic | 40.0% | |
| ! | ACAAACCCTCGTGGATTAAT+TGG | - | chr2_1:69412058-69412077 | Msa0220930:intron | 40.0% |
| CTTCTCCAATTAATCCACGA+GGG | + | chr2_1:69412066-69412085 | None:intergenic | 40.0% | |
| TCTTCTCCAATTAATCCACG+AGG | + | chr2_1:69412067-69412086 | None:intergenic | 40.0% | |
| !! | CTGATTGGTCTCTTATAGCT+CGG | - | chr2_1:69412089-69412108 | Msa0220930:intron | 40.0% |
| AGATTGTGGGAAATAGGCTT+AGG | - | chr2_1:69412178-69412197 | Msa0220930:intron | 40.0% | |
| GAAATAGGCTTAGGTGGTTT+AGG | - | chr2_1:69412187-69412206 | Msa0220930:intron | 40.0% | |
| GAGGATAGTCAAATCACTAG+AGG | - | chr2_1:69412266-69412285 | Msa0220930:intron | 40.0% | |
| ATTATCTCACTTAGTGGGGT+TGG | + | chr2_1:69412395-69412414 | None:intergenic | 40.0% | |
| CCAGCATATTCTCTACAACA+TGG | + | chr2_1:69412480-69412499 | None:intergenic | 40.0% | |
| CCATGTTGTAGAGAATATGC+TGG | - | chr2_1:69412477-69412496 | Msa0220930:intron | 40.0% | |
| GTTGTAGAGAATATGCTGGT+AGG | - | chr2_1:69412481-69412500 | Msa0220930:intron | 40.0% | |
| !! | GTAGGTTTTGTAGTTGTGGT+TGG | - | chr2_1:69412499-69412518 | Msa0220930:intron | 40.0% |
| ! | CTGAGTTTTACACTCAAGTC+AGG | - | chr2_1:69412693-69412712 | Msa0220930:intron | 40.0% |
| GTCCTATTTCATTACAGTCC+AGG | - | chr2_1:69413307-69413326 | Msa0220930:intron | 40.0% | |
| TCCCTGGACTGTAATGAAAT+AGG | + | chr2_1:69413312-69413331 | None:intergenic | 40.0% | |
| !! | TGGCTTGGTGTTTGTTAAAC+GGG | - | chr2_1:69413420-69413439 | Msa0220930:intron | 40.0% |
| ! | GGGGTTAGTACATTAGACTA+AGG | + | chr2_1:69413462-69413481 | None:intergenic | 40.0% |
| !! | ACGGCTTGGTGTTTGTTAAA+CGG | - | chr2_1:69413509-69413528 | Msa0220930:intron | 40.0% |
| ! | GGGGTTAGTACATTAGACTA+AGG | + | chr2_1:69413462-69413481 | None:intergenic | 40.0% |
| ACCCCATTGTGCATATTGTT+TGG | - | chr2_1:69413567-69413586 | Msa0220930:intron | 40.0% | |
| CCCAAACAATATGCACAATG+GGG | + | chr2_1:69413571-69413590 | None:intergenic | 40.0% | |
| CCCCATTGTGCATATTGTTT+GGG | - | chr2_1:69413568-69413587 | Msa0220930:intron | 40.0% | |
| CAATTAGTGTCAAACCTGGA+TGG | - | chr2_1:69413842-69413861 | Msa0220930:intron | 40.0% | |
| TGGATGTTCATTTCCCTTCT+CGG | + | chr2_1:69413893-69413912 | None:intergenic | 40.0% | |
| GTGAATCTCACTACACTTGA+TGG | - | chr2_1:69414039-69414058 | Msa0220930:CDS | 40.0% | |
| TGTTGTTCATCCTGAGTATG+AGG | - | chr2_1:69414089-69414108 | Msa0220930:CDS | 40.0% | |
| CCTTCTTTGTTGGATCCTTT+GGG | + | chr2_1:69414143-69414162 | None:intergenic | 40.0% | |
| CCAAAGGATCCAACAAAGAA+GGG | - | chr2_1:69414141-69414160 | Msa0220930:CDS | 40.0% | |
| CTCAAGTTTCCCTTCTTTGT+TGG | + | chr2_1:69414153-69414172 | None:intergenic | 40.0% | |
| CAACAAAGAAGGGAAACTTG+AGG | - | chr2_1:69414151-69414170 | Msa0220930:CDS | 40.0% | |
| TCAACGTCAAATTCCCAACT+CGG | - | chr2_1:69414181-69414200 | Msa0220930:CDS | 40.0% | |
| ATTGCCTCCTGTCAAGATTA+TGG | + | chr2_1:69414319-69414338 | None:intergenic | 40.0% | |
| TTTGGGGATCGAAATCCCTT+TGG | - | chr2_1:69411647-69411666 | Msa0220930:CDS | 45.0% | |
| TCGAAATCCCTTTGGTGGAA+TGG | - | chr2_1:69411655-69411674 | Msa0220930:CDS | 45.0% | |
| CGAAATCCCTTTGGTGGAAT+GGG | - | chr2_1:69411656-69411675 | Msa0220930:CDS | 45.0% | |
| AGAGGTAGCAATGGCATGTT+TGG | - | chr2_1:69411689-69411708 | Msa0220930:CDS | 45.0% | |
| ! | TTTGGATCCTATGGTGATGC+TGG | - | chr2_1:69411707-69411726 | Msa0220930:CDS | 45.0% |
| AGTGGAGTCAATGTGCATCA+AGG | - | chr2_1:69411734-69411753 | Msa0220930:CDS | 45.0% | |
| AACCAAAGTACAAACCCTCG+TGG | - | chr2_1:69412049-69412068 | Msa0220930:intron | 45.0% | |
| ATCCACGAGGGTTTGTACTT+TGG | + | chr2_1:69412054-69412073 | None:intergenic | 45.0% | |
| TTGTGGGAAATAGGCTTAGG+TGG | - | chr2_1:69412181-69412200 | Msa0220930:intron | 45.0% | |
| AGGAAGGACAGTAGATGACA+TGG | - | chr2_1:69412244-69412263 | Msa0220930:intron | 45.0% | |
| AAGGACAGTAGATGACATGG+AGG | - | chr2_1:69412247-69412266 | Msa0220930:intron | 45.0% | |
| AGTCAAATCACTAGAGGCAG+AGG | - | chr2_1:69412272-69412291 | Msa0220930:intron | 45.0% | |
| !! | GCTGGTAGGTTTTGTAGTTG+TGG | - | chr2_1:69412495-69412514 | Msa0220930:intron | 45.0% |
| ! | TGTGGTTGGTGCAATGTATG+TGG | - | chr2_1:69412513-69412532 | Msa0220930:intron | 45.0% |
| !! | TGTATGTGGTGCCATTTGTG+TGG | - | chr2_1:69412527-69412546 | Msa0220930:intron | 45.0% |
| AGAAGCAGATGCCACACAAA+TGG | + | chr2_1:69412541-69412560 | None:intergenic | 45.0% | |
| !! | CTATATGGCATCGACACATG+TGG | - | chr2_1:69412859-69412878 | Msa0220930:intron | 45.0% |
| TGACACAGACACTTTGACAC+TGG | + | chr2_1:69412928-69412947 | None:intergenic | 45.0% | |
| ! | CAAAGTGTCTGTGTCATGTC+TGG | - | chr2_1:69412932-69412951 | Msa0220930:intron | 45.0% |
| AGGGATGTAGAAGTCTTCTG+CGG | - | chr2_1:69413327-69413346 | Msa0220930:intron | 45.0% | |
| !! | CGGCTTGGTGTTTGTTAAAC+GGG | - | chr2_1:69413510-69413529 | Msa0220930:intron | 45.0% |
| TGTCAAACCTGGATGGAAGA+AGG | - | chr2_1:69413849-69413868 | Msa0220930:intron | 45.0% | |
| GTCAAACCTGGATGGAAGAA+GGG | - | chr2_1:69413850-69413869 | Msa0220930:intron | 45.0% | |
| TCAAACCTGGATGGAAGAAG+GGG | - | chr2_1:69413851-69413870 | Msa0220930:intron | 45.0% | |
| AAAGATCACTTTCCCCGAGA+AGG | - | chr2_1:69413876-69413895 | Msa0220930:intron | 45.0% | |
| AAGATCACTTTCCCCGAGAA+GGG | - | chr2_1:69413877-69413896 | Msa0220930:intron | 45.0% | |
| GATGTTCATTTCCCTTCTCG+GGG | + | chr2_1:69413891-69413910 | None:intergenic | 45.0% | |
| GGATGTTCATTTCCCTTCTC+GGG | + | chr2_1:69413892-69413911 | None:intergenic | 45.0% | |
| TCACGAGTGAACACATTGTG+TGG | + | chr2_1:69413958-69413977 | None:intergenic | 45.0% | |
| CACAATGTGTTCACTCGTGA+AGG | - | chr2_1:69413958-69413977 | Msa0220930:intron | 45.0% | |
| TCTCTTGCAGAAGCCTTAGT+TGG | - | chr2_1:69414009-69414028 | Msa0220930:CDS | 45.0% | |
| TGTTCATCCTGAGTATGAGG+AGG | - | chr2_1:69414092-69414111 | Msa0220930:CDS | 45.0% | |
| ! | TTTGTTGGATCCTTTGGGAG+TGG | + | chr2_1:69414138-69414157 | None:intergenic | 45.0% |
| CCCAAAGGATCCAACAAAGA+AGG | - | chr2_1:69414140-69414159 | Msa0220930:CDS | 45.0% | |
| CCCTTCTTTGTTGGATCCTT+TGG | + | chr2_1:69414144-69414163 | None:intergenic | 45.0% | |
| GGCAGGAATGAAGAAAGTCT+TGG | - | chr2_1:69414221-69414240 | Msa0220930:CDS | 45.0% | |
| GGAATGAAGAAAGTCTTGGC+CGG | - | chr2_1:69414225-69414244 | Msa0220930:CDS | 45.0% | |
| ! | CTACCAGAGGCATGAGAATC+AGG | + | chr2_1:69411545-69411564 | None:intergenic | 50.0% |
| GATTCTCATGCCTCTGGTAG+TGG | - | chr2_1:69411545-69411564 | Msa0220930:three_prime_UTR | 50.0% | |
| TCTACTACCACCACTACCAG+AGG | + | chr2_1:69411558-69411577 | None:intergenic | 50.0% | |
| AATCCCTTTGGTGGAATGGG+AGG | - | chr2_1:69411659-69411678 | Msa0220930:CDS | 50.0% | |
| ATCCCTTTGGTGGAATGGGA+GGG | - | chr2_1:69411660-69411679 | Msa0220930:CDS | 50.0% | |
| ATCCCTCCCATTCCACCAAA+GGG | + | chr2_1:69411665-69411684 | None:intergenic | 50.0% | |
| TTTGGTGGAATGGGAGGGAT+GGG | - | chr2_1:69411665-69411684 | Msa0220930:CDS | 50.0% | |
| ACTTCCTCCAGCATCACCAT+AGG | + | chr2_1:69411717-69411736 | None:intergenic | 50.0% | |
| ! | TATGGTGATGCTGGAGGAAG+TGG | - | chr2_1:69411716-69411735 | Msa0220930:CDS | 50.0% |
| ACTAGAGGCAGAGGAAGACT+TGG | - | chr2_1:69412281-69412300 | Msa0220930:intron | 50.0% | |
| !! | ACTTAGTGGGGTTGGCTACA+TGG | + | chr2_1:69412387-69412406 | None:intergenic | 50.0% |
| GCAGAAGACTTCTACATCCC+TGG | + | chr2_1:69413328-69413347 | None:intergenic | 50.0% | |
| GTGACTTTGCTGCACTCGAA+AGG | + | chr2_1:69413802-69413821 | None:intergenic | 50.0% | |
| TTTGTCCCCTTCTTCCATCC+AGG | + | chr2_1:69413859-69413878 | None:intergenic | 50.0% | |
| GGAACAACCTCCTCATACTC+AGG | + | chr2_1:69414102-69414121 | None:intergenic | 50.0% | |
| GAGGAGGTTGTTCCAAGAGA+AGG | - | chr2_1:69414108-69414127 | Msa0220930:CDS | 50.0% | |
| AGAAGGAATGCCACTCCCAA+AGG | - | chr2_1:69414125-69414144 | Msa0220930:CDS | 50.0% | |
| ATTCCCAACTCGGCTCACTT+CGG | - | chr2_1:69414191-69414210 | Msa0220930:CDS | 50.0% | |
| ! | GCATGAGAATCAGGTGGTGG+TGG | + | chr2_1:69411536-69411555 | None:intergenic | 55.0% |
| GAGGCATGAGAATCAGGTGG+TGG | + | chr2_1:69411539-69411558 | None:intergenic | 55.0% | |
| ! | CCAGAGGCATGAGAATCAGG+TGG | + | chr2_1:69411542-69411561 | None:intergenic | 55.0% |
| CCACCTGATTCTCATGCCTC+TGG | - | chr2_1:69411539-69411558 | Msa0220930:three_prime_UTR | 55.0% | |
| !! | TCTCATGCCTCTGGTAGTGG+TGG | - | chr2_1:69411548-69411567 | Msa0220930:three_prime_UTR | 55.0% |
| GGGGATCGAAATCCCTTTGG+TGG | - | chr2_1:69411650-69411669 | Msa0220930:CDS | 55.0% | |
| CATCCCTCCCATTCCACCAA+AGG | + | chr2_1:69411666-69411685 | None:intergenic | 55.0% | |
| CTTTGGTGGAATGGGAGGGA+TGG | - | chr2_1:69411664-69411683 | Msa0220930:CDS | 55.0% | |
| GGGATGGGAAGAGGTAGCAA+TGG | - | chr2_1:69411680-69411699 | Msa0220930:CDS | 55.0% | |
| ! | GGATCCTATGGTGATGCTGG+AGG | - | chr2_1:69411710-69411729 | Msa0220930:CDS | 55.0% |
| GCATCAAGGTCCTCCTCGTA+AGG | - | chr2_1:69411748-69411767 | Msa0220930:CDS | 55.0% | |
| !! | TCAATAGGAGGCGCCTTACG+AGG | + | chr2_1:69411764-69411783 | None:intergenic | 55.0% |
| GGAAGAGGAAGGTTCGACTG+CGG | + | chr2_1:69412634-69412653 | None:intergenic | 55.0% | |
| GTGCAGCAAAGTCACATCGC+TGG | - | chr2_1:69413807-69413826 | Msa0220930:intron | 55.0% | |
| GGGAGTGGCATTCCTTCTCT+TGG | + | chr2_1:69414123-69414142 | None:intergenic | 55.0% | |
| GATCCGAAGTGAGCCGAGTT+GGG | + | chr2_1:69414197-69414216 | None:intergenic | 55.0% | |
| TGATCCGAAGTGAGCCGAGT+TGG | + | chr2_1:69414198-69414217 | None:intergenic | 55.0% | |
| TCGGCTCACTTCGGATCAGA+AGG | - | chr2_1:69414200-69414219 | Msa0220930:CDS | 55.0% | |
| CTCACTTCGGATCAGAAGGC+AGG | - | chr2_1:69414204-69414223 | Msa0220930:CDS | 55.0% | |
| GGAATGGGAGGGATGGGAAG+AGG | - | chr2_1:69411671-69411690 | Msa0220930:CDS | 60.0% | |
| !! | ATAGGAGGCGCCTTACGAGG+AGG | + | chr2_1:69411761-69411780 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 69411518 | 69414338 | 69411518 | ID=Msa0220930;Name=Msa0220930 |
| chr2_1 | mRNA | 69411518 | 69414338 | 69411518 | ID=Msa0220930-mRNA-1;Parent=Msa0220930;Name=Msa0220930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.5|1|1|1|2|87|263 |
| chr2_1 | exon | 69411518 | 69412043 | 69411518 | ID=Msa0220930-mRNA-1:exon:19664;Parent=Msa0220930-mRNA-1 |
| chr2_1 | exon | 69413986 | 69414338 | 69413986 | ID=Msa0220930-mRNA-1:exon:19663;Parent=Msa0220930-mRNA-1 |
| chr2_1 | CDS | 69413986 | 69414338 | 69413986 | ID=Msa0220930-mRNA-1:cds;Parent=Msa0220930-mRNA-1 |
| chr2_1 | CDS | 69411605 | 69412043 | 69411605 | ID=Msa0220930-mRNA-1:cds;Parent=Msa0220930-mRNA-1 |
| chr2_1 | three_prime_UTR | 69411518 | 69411604 | 69411518 | ID=Msa0220930-mRNA-1:three_prime_utr;Parent=Msa0220930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
