AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223610 MtrunA17_Chr2g0329221 98.331 599 8 1 1 599 1 597 0.0 1232
Msa0223610 MtrunA17_Chr3g0110331 80.833 600 85 5 1 596 1 574 0.0 979
Msa0223610 MtrunA17_Chr4g0033361 79.667 600 104 4 1 598 1 584 0.0 970
Msa0223610 MtrunA17_Chr3g0110341 78.392 597 83 7 1 596 30 581 0.0 919
Msa0223610 MtrunA17_Chr5g0447801 88.693 283 32 0 266 548 3 285 0.0 533
Msa0223610 MtrunA17_Chr4g0038181 42.737 475 227 10 69 528 2 446 4.63e-127 381
Msa0223610 MtrunA17_Chr4g0034371 29.554 538 336 14 29 541 1 520 2.63e-63 218
Msa0223610 MtrunA17_Chr4g0038201 35.598 368 162 9 49 410 18 316 2.82e-60 204
Msa0223610 MtrunA17_Chr4g0038191 55.172 87 38 1 442 528 2 87 3.68e-24 97.8
Msa0223610 MtrunA17_Chr3g0103961 24.891 229 161 7 119 341 25 248 2.46e-15 76.3
Msa0223610 MtrunA17_Chr3g0103941 25.439 228 149 9 136 355 33 247 1.50e-14 73.9
Msa0223610 MtrunA17_Chr2g0301841 26.126 222 153 7 121 337 69 284 1.61e-13 71.6
Msa0223610 MtrunA17_Chr4g0029991 26.190 210 135 7 148 343 306 509 4.13e-13 72.0
Msa0223610 MtrunA17_Chr2g0301821 26.961 204 139 7 128 325 66 265 4.81e-13 69.7
Msa0223610 MtrunA17_Chr2g0301761 25.616 203 143 5 128 325 59 258 7.62e-13 68.9
Msa0223610 MtrunA17_Chr3g0103911 25.253 198 136 7 136 325 33 226 3.44e-12 66.6
Msa0223610 MtrunA17_Chr3g0103891 25.253 198 136 7 136 325 33 226 3.58e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223610 AT2G31510.1 71.057 577 147 5 1 573 1 561 0.0 836
Msa0223610 AT1G65430.1 67.291 587 165 5 16 598 4 567 0.0 808
Msa0223610 AT2G31510.3 76.687 489 112 2 86 573 2 489 0.0 786
Msa0223610 AT1G05890.1 71.345 513 142 3 35 545 16 525 0.0 784
Msa0223610 AT2G31510.2 71.930 513 126 3 1 510 1 498 0.0 781
Msa0223610 AT1G05890.2 75.158 475 115 2 71 545 96 567 0.0 776
Msa0223610 AT2G31770.1 54.906 530 202 11 31 544 2 510 0.0 589
Msa0223610 AT2G31760.1 55.446 505 202 8 31 531 2 487 0.0 579
Msa0223610 AT2G31780.1 53.004 466 191 9 1 463 1 441 4.01e-175 504
Msa0223610 AT1G05880.2 39.521 501 268 10 49 538 14 490 3.39e-110 340
Msa0223610 AT1G05880.1 39.521 501 261 12 49 538 14 483 5.60e-106 328
Msa0223610 AT1G05880.3 38.542 480 260 10 49 517 14 469 1.96e-99 311
Msa0223610 AT3G27710.1 31.275 502 303 15 48 528 19 499 2.66e-68 231
Msa0223610 AT4G34370.1 31.308 543 297 21 17 528 2 499 1.65e-66 228
Msa0223610 AT2G16090.3 29.945 541 308 17 17 528 2 500 2.52e-62 215
Msa0223610 AT2G16090.1 29.945 541 308 17 17 528 2 500 4.00e-62 216
Msa0223610 AT2G16090.4 29.945 541 308 17 17 528 2 500 4.65e-62 216
Msa0223610 AT2G16090.2 30.172 464 269 13 94 528 3 440 9.36e-58 202
Msa0223610 AT2G16090.5 30.172 464 269 13 94 528 3 440 9.50e-58 201
Msa0223610 AT5G63750.1 27.257 565 318 18 72 595 9 521 2.63e-57 201
Msa0223610 AT5G08730.1 25.283 530 329 12 72 594 8 477 1.52e-53 191
Msa0223610 AT4G34370.2 35.311 354 179 15 199 528 5 332 2.58e-50 180
Msa0223610 AT5G63730.1 26.531 539 319 16 72 594 9 486 2.14e-47 174
Msa0223610 AT3G27720.1 33.533 334 189 11 211 528 143 459 3.81e-45 167
Msa0223610 AT5G63760.1 26.707 498 277 16 125 594 2 439 8.09e-45 166
Msa0223610 AT5G63760.3 26.707 498 277 16 125 594 2 439 8.09e-45 166
Msa0223610 AT5G63760.2 26.707 498 277 16 125 594 2 439 8.09e-45 166
Msa0223610 AT5G63760.4 27.877 391 207 13 220 594 2 333 1.76e-36 140
Msa0223610 AT1G32340.1 25.359 209 130 6 149 337 378 580 1.72e-12 70.9
Msa0223610 AT5G37560.1 25.764 229 146 9 127 344 163 378 5.83e-12 68.6

Find 156 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTATGTGTGTAGCTTTA+TGG 0.140438 2_1:-73222752 None:intergenic
AATCTAGGGCACACACAATT+AGG 0.221308 2_1:-73222803 None:intergenic
TATCCTCCTTGCACTCCTTT+TGG 0.224567 2_1:+73229626 Msa0223610:three_prime_UTR
TTAAGAAACTGTGACAAATA+AGG 0.258566 2_1:+73229889 Msa0223610:three_prime_UTR
TGTTATGTGTGTAGCTTTAT+GGG 0.266174 2_1:-73222751 None:intergenic
CCTCAAAATCCATTTGATTA+GGG 0.283378 2_1:+73222844 Msa0223610:five_prime_UTR
CCTGGTCAATCCAGCTAGTT+TGG 0.283940 2_1:-73228729 None:intergenic
TCCTCAAAATCCATTTGATT+AGG 0.290743 2_1:+73222843 Msa0223610:five_prime_UTR
GATATCTGATTCTTTCAATA+TGG 0.302344 2_1:-73223695 None:intergenic
TATAACCGAGGCTTGGTTAC+AGG 0.307193 2_1:+73227710 Msa0223610:CDS
ATTTAATATTTAATATAAAC+AGG 0.307672 2_1:+73229574 Msa0223610:three_prime_UTR
CTTCAATGTAAGATCTAATA+AGG 0.312321 2_1:-73224526 None:intergenic
CTGTAACTGAACATCTTATA+TGG 0.319335 2_1:+73229745 Msa0223610:three_prime_UTR
TTCAAGCCTCACATTGGTTT+AGG 0.337150 2_1:+73222717 Msa0223610:five_prime_UTR
AACCAATGTGAGGCTTGAAT+TGG 0.342218 2_1:-73222713 None:intergenic
GCATCAGGATTCTCATAAAC+TGG 0.342613 2_1:-73224033 None:intergenic
AGTCATTTGTGTATAAGCTT+GGG 0.359371 2_1:+73229854 Msa0223610:three_prime_UTR
TTACATTGAAGACAATAAAA+AGG 0.359399 2_1:+73224538 Msa0223610:CDS
ATCTAGGGCACACACAATTA+GGG 0.359435 2_1:-73222802 None:intergenic
TATCATCTTCCTGCCGTTCC+CGG 0.363856 2_1:-73223717 None:intergenic
TCTTCAGGTGAGGCAGAATC+AGG 0.366980 2_1:+73228617 Msa0223610:intron
TTCAATCGGTCTCTTGCACT+TGG 0.376001 2_1:-73226368 None:intergenic
GTCATCCATGGGAGCATCTT+CGG 0.397990 2_1:-73222947 None:intergenic
TGTCTTACCTCTTTAGCATC+AGG 0.407328 2_1:-73224048 None:intergenic
ACCAATGTGAGGCTTGAATT+GGG 0.407400 2_1:-73222712 None:intergenic
CCGAAGAAAAGTTGGCTTGT+TGG 0.412456 2_1:+73224005 Msa0223610:CDS
CACTTCAATTAACGATGGTC+CGG 0.414083 2_1:+73224397 Msa0223610:CDS
TCCTACTTCGTCATTACAAT+TGG 0.415038 2_1:+73223788 Msa0223610:CDS
ACTTCTTCGAGAATTTGGTT+AGG 0.415280 2_1:+73229218 Msa0223610:CDS
CACACACAATTAGGGGAATT+CGG 0.420479 2_1:-73222794 None:intergenic
CGGTAATCATATTTATGTGC+TGG 0.427634 2_1:+73229534 Msa0223610:three_prime_UTR
CTTCTTCGAGAATTTGGTTA+GGG 0.433695 2_1:+73229219 Msa0223610:CDS
TATTGAAAGAATCAGATATC+CGG 0.435334 2_1:+73223698 Msa0223610:CDS
AGTAGGATGCTTGCAGCAAC+TGG 0.437632 2_1:-73223772 None:intergenic
CAACACATCAAAAGTTGAAA+TGG 0.437655 2_1:+73229508 Msa0223610:three_prime_UTR
AGAAATGGCAAAGAATTCAT+TGG 0.440218 2_1:+73226937 Msa0223610:CDS
GCAGCACCACAAGCGGGATC+AGG 0.445228 2_1:-73224440 None:intergenic
ATCAGATATCCGGGAACGGC+AGG 0.449175 2_1:+73223708 Msa0223610:CDS
ACCAAGTGGTGTCCTGCTCC+TGG 0.450476 2_1:+73224935 Msa0223610:CDS
ATAAATGTACTGAAGAAATC+AGG 0.455318 2_1:-73229806 None:intergenic
TTACATGAACAGTTTGCATC+TGG 0.456596 2_1:-73227190 None:intergenic
CTTCAGCACCGAGGAATACT+TGG 0.457538 2_1:-73228676 None:intergenic
GAGTCATTTGTGTATAAGCT+TGG 0.457740 2_1:+73229853 Msa0223610:three_prime_UTR
TTGGTTAGGGCATTAGAGAA+TGG 0.467324 2_1:+73229232 Msa0223610:CDS
GAAGCACTGTGAATCTTAGA+AGG 0.475586 2_1:-73224216 None:intergenic
GACACTGTGCCACAATCCAC+TGG 0.478077 2_1:-73225152 None:intergenic
CAGAAGACGTGTGTTTCTAG+TGG 0.480765 2_1:-73229476 None:intergenic
GCTTCATCAATGTGCCGAAA+AGG 0.481489 2_1:+73228649 Msa0223610:CDS
TCAATCGGTCTCTTGCACTT+GGG 0.483764 2_1:-73226367 None:intergenic
CGCTGCAGATAGTTGAGTGC+AGG 0.485020 2_1:+73228415 Msa0223610:intron
AGGTGAGGCAGAATCAGGTT+TGG 0.487080 2_1:+73228622 Msa0223610:intron
CAGAATCCGAAAACATGAAC+TGG 0.489228 2_1:+73225198 Msa0223610:CDS
TGAGAATCCTGATGCTAAAG+AGG 0.493553 2_1:+73224041 Msa0223610:CDS
ATTTAATATAAACAGGATGA+AGG 0.493753 2_1:+73229581 Msa0223610:three_prime_UTR
ATTATCATCAGTTAATCTGC+TGG 0.496995 2_1:-73229371 None:intergenic
GATGATGATTACTTTGATGA+TGG 0.499870 2_1:+73223027 Msa0223610:CDS
TATCTACACAGGCTATGCCT+TGG 0.501872 2_1:+73226693 Msa0223610:intron
GCTTGCAGCAACTGGTGGTA+TGG 0.503549 2_1:-73223764 None:intergenic
ATGTCATATGCATGCACCCT+TGG 0.503759 2_1:-73226396 None:intergenic
ATAAACTTAAGTTGTGACTC+AGG 0.504131 2_1:-73227690 None:intergenic
TTTAATATAAACAGGATGAA+GGG 0.505186 2_1:+73229582 Msa0223610:three_prime_UTR
TTGAAGTGGACATATGCATA+TGG 0.505690 2_1:+73228444 Msa0223610:CDS
AATCGTTGAATTCTTTAGAC+GGG 0.510360 2_1:-73228700 None:intergenic
GTCGTCGCTGTAGTCATCCA+TGG 0.513616 2_1:-73222959 None:intergenic
TCAGTAATGTTAATGACGCT+TGG 0.515158 2_1:+73223962 Msa0223610:CDS
GATAGAGTCCGAAGAAAAGT+TGG 0.518754 2_1:+73223997 Msa0223610:CDS
GTCATTTGTGTATAAGCTTG+GGG 0.525801 2_1:+73229855 Msa0223610:three_prime_UTR
CAATCTAAAGTGCACTGAAG+AGG 0.528587 2_1:+73225121 Msa0223610:intron
CTGATGATTCTGCTCAGTCT+CGG 0.530617 2_1:+73223052 Msa0223610:CDS
CAAGTATTCCTCGGTGCTGA+AGG 0.531402 2_1:+73228677 Msa0223610:CDS
TGCAGATAGTTGAGTGCAGG+CGG 0.532130 2_1:+73228418 Msa0223610:intron
ATCGAGGGATTCAACATCGT+TGG 0.533819 2_1:-73222902 None:intergenic
TTAAGTTTATAACCGAGGCT+TGG 0.534315 2_1:+73227703 Msa0223610:CDS
ACAGGCTATGCCTTGGTGCA+TGG 0.537971 2_1:+73226700 Msa0223610:intron
ATTGAAAGAATCAGATATCC+GGG 0.541380 2_1:+73223699 Msa0223610:CDS
ATCAACAGCAGCACCACAAG+CGG 0.544045 2_1:-73224447 None:intergenic
AAATTAGGAATGTACCCAAA+AGG 0.546967 2_1:-73229641 None:intergenic
CAGTTCTTTGAGTACTTGCA+AGG 0.548895 2_1:+73228501 Msa0223610:CDS
CCCCAATTCAAGCCTCACAT+TGG 0.549787 2_1:+73222711 Msa0223610:five_prime_UTR
AAATGCGGCAGGGAGCAGTA+AGG 0.553045 2_1:+73229309 Msa0223610:CDS
ATGCATATCATCAGAATCCA+TGG 0.556118 2_1:-73222875 None:intergenic
ACTTAAGTTGTGACTCAGGT+TGG 0.556969 2_1:-73227686 None:intergenic
ACCAATTGTAATGACGAAGT+AGG 0.562400 2_1:-73223789 None:intergenic
CAGCAAAATTCAAATTTGCA+AGG 0.564267 2_1:-73226427 None:intergenic
TTAATATAAACAGGATGAAG+GGG 0.565875 2_1:+73229583 Msa0223610:three_prime_UTR
CATGGTCAGACCATGGTGAA+AGG 0.567864 2_1:+73226718 Msa0223610:CDS
GCATGTTCACAACCAGGAGC+AGG 0.569609 2_1:-73224947 None:intergenic
ACTTCAATTAACGATGGTCC+GGG 0.571072 2_1:+73224398 Msa0223610:CDS
ACCAGGAGCAGGACACCACT+TGG 0.572721 2_1:-73224936 None:intergenic
CCAAACTAGCTGGATTGACC+AGG 0.573269 2_1:+73228729 Msa0223610:CDS
AAATCGTTGAATTCTTTAGA+CGG 0.581686 2_1:-73228701 None:intergenic
CATCTTAGCATCAAGCATCC+CGG 0.583374 2_1:-73224416 None:intergenic
ACACACATTATTATGAGCGG+TGG 0.585129 2_1:+73226966 Msa0223610:CDS
AGAGAATGGTTTATGTGATG+TGG 0.585426 2_1:+73229246 Msa0223610:CDS
GGTCTCTTGCACTTGGGACA+CGG 0.587340 2_1:-73226361 None:intergenic
TCGTCGCTGTAGTCATCCAT+GGG 0.587796 2_1:-73222958 None:intergenic
ACTCGTTGCTTTGCTTGTAG+CGG 0.587856 2_1:-73229281 None:intergenic
AGATGTCCTGATCCCGCTTG+TGG 0.591881 2_1:+73224434 Msa0223610:CDS
AGTGCAGGCGGGTATTGAAG+TGG 0.592470 2_1:+73228430 Msa0223610:CDS
TGTAAGATCTAATAAGGTAA+CGG 0.593468 2_1:-73224520 None:intergenic
GCTCACCGTCCAGTGGATTG+TGG 0.593545 2_1:+73225143 Msa0223610:CDS
CCAATGTGAGGCTTGAATTG+GGG 0.593893 2_1:-73222711 None:intergenic
TCAGACCATGGTGAAAGGAC+TGG 0.594334 2_1:+73226723 Msa0223610:CDS
AATGCGGCAGGGAGCAGTAA+GGG 0.595005 2_1:+73229310 Msa0223610:CDS
ATTTACCTGTAACCAAGCCT+CGG 0.595509 2_1:-73227715 None:intergenic
AAGATTCACAGTGCTTCTTG+CGG 0.597915 2_1:+73224222 Msa0223610:CDS
AGAAGACGTGTGTTTCTAGT+GGG 0.598452 2_1:-73229475 None:intergenic
ATGAAGCAGCTAAACAAGAG+GGG 0.599723 2_1:+73226769 Msa0223610:CDS
GCAGATAGTTGAGTGCAGGC+GGG 0.600899 2_1:+73228419 Msa0223610:intron
ATCAGTTAATCTGCTGGACA+CGG 0.602307 2_1:-73229365 None:intergenic
ATCAAAAGTTGAAATGGAGT+CGG 0.603000 2_1:+73229514 Msa0223610:three_prime_UTR
CGGTGGGTAGAGAAAATCTA+GGG 0.603099 2_1:-73222817 None:intergenic
TATGAAGCAGCTAAACAAGA+GGG 0.604422 2_1:+73226768 Msa0223610:CDS
GCGGTGGGTAGAGAAAATCT+AGG 0.604634 2_1:-73222818 None:intergenic
AAGGAACTCCAAGTATTCCT+CGG 0.604831 2_1:+73228668 Msa0223610:CDS
AACACACGTCTTCTGCTCAA+AGG 0.605119 2_1:+73229484 Msa0223610:three_prime_UTR
TTATGTGATGTGGATAGTAA+TGG 0.606906 2_1:+73229256 Msa0223610:CDS
CAGTGTACCTATGCAAATGT+CGG 0.609475 2_1:+73229409 Msa0223610:CDS
ATGTACCCAAAAGGAGTGCA+AGG 0.610099 2_1:-73229632 None:intergenic
ATTGCACATCGCGCATGCAG+TGG 0.611898 2_1:-73229437 None:intergenic
TCAACAGCAGCACCACAAGC+GGG 0.617382 2_1:-73224446 None:intergenic
CACACATTATTATGAGCGGT+GGG 0.617387 2_1:+73226967 Msa0223610:CDS
GTATGTGGCCAGCTTACTTG+CGG 0.619197 2_1:+73224171 Msa0223610:intron
TCTTCTCCTAAACCAATGTG+AGG 0.620088 2_1:-73222723 None:intergenic
ACAACTTAAGTTTATAACCG+AGG 0.623702 2_1:+73227698 Msa0223610:CDS
TCTAGGGCACACACAATTAG+GGG 0.624327 2_1:-73222801 None:intergenic
AGGCAGAATCAGGTTTGGAG+AGG 0.624341 2_1:+73228627 Msa0223610:CDS
TGAAACCGAAGATGCTCCCA+TGG 0.629493 2_1:+73222942 Msa0223610:CDS
TGAAGAGGCTCACCGTCCAG+TGG 0.630686 2_1:+73225136 Msa0223610:CDS
CAAAATTCAAATTTGCAAGG+TGG 0.639701 2_1:-73226424 None:intergenic
GCGCGATGTGCAATCAAGAG+CGG 0.641145 2_1:+73229446 Msa0223610:CDS
CTGTGCCACAATCCACTGGA+CGG 0.642823 2_1:-73225148 None:intergenic
TGGCAAAGAATTCATTGGAG+AGG 0.643713 2_1:+73226942 Msa0223610:CDS
CACTGTAGAAATCGTCATCG+AGG 0.644752 2_1:-73222918 None:intergenic
CTCGATGACGATTTCTACAG+TGG 0.647565 2_1:+73222919 Msa0223610:CDS
TAATATAAACAGGATGAAGG+GGG 0.650273 2_1:+73229584 Msa0223610:three_prime_UTR
ACTGTAGAAATCGTCATCGA+GGG 0.653405 2_1:-73222917 None:intergenic
TTATGAAGCAGCTAAACAAG+AGG 0.656326 2_1:+73226767 Msa0223610:CDS
AGGATGCTTGCAGCAACTGG+TGG 0.656384 2_1:-73223769 None:intergenic
TGAAGCAGCTAAACAAGAGG+GGG 0.657257 2_1:+73226770 Msa0223610:CDS
AGCAAAAGCTATATGAACAG+AGG 0.658619 2_1:-73225012 None:intergenic
TGCTCAGTCTCGGAGTACTG+AGG 0.664013 2_1:+73223062 Msa0223610:CDS
ATTGGCACTTCAATTAACGA+TGG 0.666421 2_1:+73224392 Msa0223610:CDS
AAGAATCAGATATCCGGGAA+CGG 0.666579 2_1:+73223704 Msa0223610:CDS
GGCAGATCCGACATTTGCAT+AGG 0.668337 2_1:-73229416 None:intergenic
GACCATGGTGAAAGGACTGG+CGG 0.675478 2_1:+73226726 Msa0223610:CDS
ATTGTGGCACAGTGTCGAAG+TGG 0.679812 2_1:+73225159 Msa0223610:CDS
GCTTATACACAAATGACTCG+AGG 0.683115 2_1:-73229849 None:intergenic
GATTAACTGATGATAATGAG+TGG 0.686673 2_1:+73229377 Msa0223610:CDS
AACCGCCAGTCCTTTCACCA+TGG 0.694411 2_1:-73226728 None:intergenic
CATGGTCTGACCATGCACCA+AGG 0.699416 2_1:-73226710 None:intergenic
CTTGGTGCATGGTCAGACCA+TGG 0.701151 2_1:+73226711 Msa0223610:CDS
TACCCAAAAGGAGTGCAAGG+AGG 0.708002 2_1:-73229629 None:intergenic
TTAACTGCATGTTCACAACC+AGG 0.709158 2_1:-73224953 None:intergenic
GGTACACACATTATTATGAG+CGG 0.716244 2_1:+73226963 Msa0223610:CDS
TAGACGGGCCTTCAGCACCG+AGG 0.721396 2_1:-73228685 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATTTAAAAGAAATATAT+GGG - chr2_1:73225943-73225962 None:intergenic 10.0%
!! TATAAAAATAACTATGAATT+TGG - chr2_1:73227085-73227104 None:intergenic 10.0%
!!! AAAAACATTTGATTTTTAAT+AGG + chr2_1:73227837-73227856 Msa0223610:intron 10.0%
!! TCAAATAGAAAAACAAAAAA+AGG - chr2_1:73223105-73223124 None:intergenic 15.0%
!!! TTGTTGATGAAATAAATTTA+CGG - chr2_1:73223607-73223626 None:intergenic 15.0%
!! ACTTTATAATTATGTACTAA+TGG + chr2_1:73223913-73223932 Msa0223610:intron 15.0%
!!! TATATGTATTCATGTATTTT+TGG + chr2_1:73225350-73225369 Msa0223610:intron 15.0%
!! CACTATTTAAAAGAAATATA+TGG - chr2_1:73225944-73225963 None:intergenic 15.0%
!!! TATTTCTTTTAAATAGTGAA+AGG + chr2_1:73225946-73225965 Msa0223610:intron 15.0%
!!! ACTTTATAATTTTACTTTAC+TGG + chr2_1:73226149-73226168 Msa0223610:intron 15.0%
!!! CTTTATAATTTTACTTTACT+GGG + chr2_1:73226150-73226169 Msa0223610:intron 15.0%
!!! CTTTTGATTATTTTATTGTT+AGG + chr2_1:73227550-73227569 Msa0223610:intron 15.0%
!! AGTATTAGATTAATAAATGA+AGG + chr2_1:73227896-73227915 Msa0223610:intron 15.0%
!! TAATCATTGTTTAAATTACA+CGG - chr2_1:73228004-73228023 None:intergenic 15.0%
!! TTACTATATCTAATTTAAAC+AGG - chr2_1:73228894-73228913 None:intergenic 15.0%
!! AAAACTATATACATCAAATT+AGG - chr2_1:73229659-73229678 None:intergenic 15.0%
!! AAAACAAAAAAAGGTGAAAA+GGG - chr2_1:73223096-73223115 None:intergenic 20.0%
!! AAAAACAAAAAAAGGTGAAA+AGG - chr2_1:73223097-73223116 None:intergenic 20.0%
!! TATTTGATTAATTGTTTAGC+TGG + chr2_1:73223118-73223137 Msa0223610:intron 20.0%
!! AAAACTTTACATAACATACA+AGG - chr2_1:73223878-73223897 None:intergenic 20.0%
!! GTACATAATTATAAAGTGAA+GGG - chr2_1:73223910-73223929 None:intergenic 20.0%
!! AGTACATAATTATAAAGTGA+AGG - chr2_1:73223911-73223930 None:intergenic 20.0%
!!! ATTTGTTTGGGTTTTAAAAT+AGG + chr2_1:73224072-73224091 Msa0223610:intron 20.0%
!! TTACATTGAAGACAATAAAA+AGG + chr2_1:73224538-73224557 Msa0223610:CDS 20.0%
!!! TTTCTATGATTAGTTTTAAG+TGG + chr2_1:73225305-73225324 Msa0223610:intron 20.0%
!! CTGATAAATAAACTAATGAT+AGG - chr2_1:73225686-73225705 None:intergenic 20.0%
!! TTATTTATCAGTATTCATGA+TGG + chr2_1:73225695-73225714 Msa0223610:intron 20.0%
!! AACAAAATTATATTAGGGAA+GGG - chr2_1:73226513-73226532 None:intergenic 20.0%
!! ATATAGTTACAAAAATGTCT+CGG - chr2_1:73226863-73226882 None:intergenic 20.0%
!!! ATGATGTCCTTTTTTTTTAT+TGG + chr2_1:73227634-73227653 Msa0223610:intron 20.0%
!! TTACAGGTAAATGAATATAT+TGG + chr2_1:73227726-73227745 Msa0223610:intron 20.0%
!! AATTCATATTGCTTTAATGT+GGG - chr2_1:73227932-73227951 None:intergenic 20.0%
!! AAATTCATATTGCTTTAATG+TGG - chr2_1:73227933-73227952 None:intergenic 20.0%
!!! ACAATTAAAAAATTAGCTTC+CGG + chr2_1:73228184-73228203 Msa0223610:intron 20.0%
!! CAAGACATATCTAATTAAAT+TGG - chr2_1:73228552-73228571 None:intergenic 20.0%
!!! TTTTGCTTATATACCATTTT+TGG + chr2_1:73228797-73228816 Msa0223610:intron 20.0%
!! TTACCATATATTATCTTTGT+TGG + chr2_1:73229063-73229082 Msa0223610:intron 20.0%
!! TAATATGATATCACTAATGA+TGG + chr2_1:73229138-73229157 Msa0223610:intron 20.0%
!! ATTTAATATAAACAGGATGA+AGG + chr2_1:73229581-73229600 Msa0223610:three_prime_UTR 20.0%
!! TTTAATATAAACAGGATGAA+GGG + chr2_1:73229582-73229601 Msa0223610:three_prime_UTR 20.0%
!! TTTATCTCCAAATTTACAAT+TGG + chr2_1:73229705-73229724 Msa0223610:intron 20.0%
!! CATAAAACCAATTGTAAATT+TGG - chr2_1:73229715-73229734 None:intergenic 20.0%
!! TTGGTCTGAAATGAATATAT+TGG + chr2_1:73223208-73223227 Msa0223610:intron 25.0%
! TGATCATGATTATGGTTTAT+TGG + chr2_1:73223245-73223264 Msa0223610:intron 25.0%
! TTTGTTGATATTGTATTGAG+TGG + chr2_1:73223270-73223289 Msa0223610:intron 25.0%
! TTGTTGATATTGTATTGAGT+GGG + chr2_1:73223271-73223290 Msa0223610:intron 25.0%
! CAATATGATCATTATTCACT+AGG - chr2_1:73223418-73223437 None:intergenic 25.0%
! ATGATCATATTGTAATTCCA+AGG + chr2_1:73223426-73223445 Msa0223610:intron 25.0%
! TGATCATATTGTAATTCCAA+GGG + chr2_1:73223427-73223446 Msa0223610:intron 25.0%
! ATGAAATAAATTTACGGTGA+GGG - chr2_1:73223601-73223620 None:intergenic 25.0%
! GATATCTGATTCTTTCAATA+TGG - chr2_1:73223698-73223717 None:intergenic 25.0%
! TATTGAAAGAATCAGATATC+CGG + chr2_1:73223698-73223717 Msa0223610:CDS 25.0%
!!! ACATGCTATGTTATTTTATG+TGG + chr2_1:73223834-73223853 Msa0223610:intron 25.0%
!!! CATGCTATGTTATTTTATGT+GGG + chr2_1:73223835-73223854 Msa0223610:intron 25.0%
! ATTATGTACTAATGGAGATA+TGG + chr2_1:73223921-73223940 Msa0223610:intron 25.0%
! TTAACTCAGCGAAATAAAAA+TGG - chr2_1:73224141-73224160 None:intergenic 25.0%
! ATATATCCTGGCATATAAAA+AGG - chr2_1:73224374-73224393 None:intergenic 25.0%
!! TTTTATATGCCAGGATATAT+TGG + chr2_1:73224374-73224393 Msa0223610:intron 25.0%
! TGTAAGATCTAATAAGGTAA+CGG - chr2_1:73224523-73224542 None:intergenic 25.0%
! CTTCAATGTAAGATCTAATA+AGG - chr2_1:73224529-73224548 None:intergenic 25.0%
! CATAATAATTCTTTGCATGT+TGG + chr2_1:73224674-73224693 Msa0223610:intron 25.0%
! GCAATGACTAAAATAAAAGA+GGG - chr2_1:73224798-73224817 None:intergenic 25.0%
! AGCAATGACTAAAATAAAAG+AGG - chr2_1:73224799-73224818 None:intergenic 25.0%
! AGAAGAAATAAGATCGTTAT+GGG - chr2_1:73224895-73224914 None:intergenic 25.0%
!! TTTTTATGCTTGTAGAACTT+CGG + chr2_1:73225253-73225272 Msa0223610:intron 25.0%
! ATAAACTAATGATAGGCATT+CGG - chr2_1:73225679-73225698 None:intergenic 25.0%
! GTTAGATGTTTGATTAAGAA+AGG + chr2_1:73225793-73225812 Msa0223610:intron 25.0%
!!! AAATTTAACATTGGTTTCTC+AGG - chr2_1:73225869-73225888 None:intergenic 25.0%
! AAACCAATGTTAAATTTGTC+TGG + chr2_1:73225872-73225891 Msa0223610:intron 25.0%
! TAAATTAAACACTCAAACAG+AGG + chr2_1:73225979-73225998 Msa0223610:intron 25.0%
! TTAATTTAACAGTTAGCTCA+GGG - chr2_1:73226311-73226330 None:intergenic 25.0%
! ATTAATTTAACAGTTAGCTC+AGG - chr2_1:73226312-73226331 None:intergenic 25.0%
! TGAGCTAACTGTTAAATTAA+TGG + chr2_1:73226311-73226330 Msa0223610:intron 25.0%
!!! TGTTAAATTAATGGACTTTC+AGG + chr2_1:73226320-73226339 Msa0223610:intron 25.0%
! ACAAAATTATATTAGGGAAG+GGG - chr2_1:73226512-73226531 None:intergenic 25.0%
! CAACAAAATTATATTAGGGA+AGG - chr2_1:73226514-73226533 None:intergenic 25.0%
!! TCCCTAATATAATTTTGTTG+AGG + chr2_1:73226514-73226533 Msa0223610:intron 25.0%
! CCCTCAACAAAATTATATTA+GGG - chr2_1:73226518-73226537 None:intergenic 25.0%
!! CCCTAATATAATTTTGTTGA+GGG + chr2_1:73226515-73226534 Msa0223610:intron 25.0%
! ACCCTCAACAAAATTATATT+AGG - chr2_1:73226519-73226538 None:intergenic 25.0%
! TATAGTTACAAAAATGTCTC+GGG - chr2_1:73226862-73226881 None:intergenic 25.0%
! AACTGAAAAAAGAAGAGAAA+TGG + chr2_1:73226922-73226941 Msa0223610:CDS 25.0%
! ATATTTCACTAGAATTCCTA+TGG + chr2_1:73227102-73227121 Msa0223610:intron 25.0%
! GTTATACAATCACATAGAAT+TGG + chr2_1:73227396-73227415 Msa0223610:intron 25.0%
!! GAATATATTGGTTATACCTT+TGG + chr2_1:73227738-73227757 Msa0223610:intron 25.0%
!! ATTTTTACAACTTTGACCAA+AGG - chr2_1:73227757-73227776 None:intergenic 25.0%
! TACGCAAAATGTTTAATCTT+AGG - chr2_1:73228082-73228101 None:intergenic 25.0%
!! CAATTAAAAAATTAGCTTCC+GGG + chr2_1:73228185-73228204 Msa0223610:intron 25.0%
! ATTGAGTAGTTTATTTGCAA+GGG - chr2_1:73228589-73228608 None:intergenic 25.0%
! AATTGAGTAGTTTATTTGCA+AGG - chr2_1:73228590-73228609 None:intergenic 25.0%
!! ACTCAATTTTTCTTATCTTC+AGG + chr2_1:73228602-73228621 Msa0223610:intron 25.0%
! AAATCGTTGAATTCTTTAGA+CGG - chr2_1:73228704-73228723 None:intergenic 25.0%
!!! CTTATATACCATTTTTGGTT+GGG + chr2_1:73228802-73228821 Msa0223610:intron 25.0%
! ACACCAACAAAGATAATATA+TGG - chr2_1:73229069-73229088 None:intergenic 25.0%
! ATATATTATCTTTGTTGGTG+TGG + chr2_1:73229068-73229087 Msa0223610:intron 25.0%
! TAAATCAAACCATACCATTT+GGG - chr2_1:73229166-73229185 None:intergenic 25.0%
! TAAAAACTTCTTCGAGAATT+TGG + chr2_1:73229213-73229232 Msa0223610:CDS 25.0%
! TTAATATAAACAGGATGAAG+GGG + chr2_1:73229583-73229602 Msa0223610:three_prime_UTR 25.0%
! ATAAATGTACTGAAGAAATC+AGG - chr2_1:73229809-73229828 None:intergenic 25.0%
!! TGTTATGTGTGTAGCTTTAT+GGG - chr2_1:73222754-73222773 None:intergenic 30.0%
TCCTCAAAATCCATTTGATT+AGG + chr2_1:73222843-73222862 Msa0223610:five_prime_UTR 30.0%
CCTCAAAATCCATTTGATTA+GGG + chr2_1:73222844-73222863 Msa0223610:five_prime_UTR 30.0%
GTGAAAAAACCCTAATCAAA+TGG - chr2_1:73222856-73222875 None:intergenic 30.0%
GATGATGATTACTTTGATGA+TGG + chr2_1:73223027-73223046 Msa0223610:CDS 30.0%
! AACTGTATTTGAGTGAGTTT+TGG + chr2_1:73223189-73223208 Msa0223610:intron 30.0%
TACTTCACTGATCATGATTA+TGG + chr2_1:73223237-73223256 Msa0223610:intron 30.0%
TGTTGATATTGTATTGAGTG+GGG + chr2_1:73223272-73223291 Msa0223610:intron 30.0%
ATATTGTAATTCCAAGGGTT+TGG + chr2_1:73223432-73223451 Msa0223610:intron 30.0%
TTACATTTACCTCCCTTTAA+AGG - chr2_1:73223517-73223536 None:intergenic 30.0%
TGAAATAAATTTACGGTGAG+GGG - chr2_1:73223600-73223619 None:intergenic 30.0%
GATGAAATAAATTTACGGTG+AGG - chr2_1:73223602-73223621 None:intergenic 30.0%
AAAATGAGACAGTCACAATA+TGG - chr2_1:73223643-73223662 None:intergenic 30.0%
! TATTGTGACTGTCTCATTTT+TGG + chr2_1:73223643-73223662 Msa0223610:intron 30.0%
ATTGAAAGAATCAGATATCC+GGG + chr2_1:73223699-73223718 Msa0223610:CDS 30.0%
! TGGTAAATCCATCATCTTTT+TGG + chr2_1:73223808-73223827 Msa0223610:intron 30.0%
! GGTAAATCCATCATCTTTTT+GGG + chr2_1:73223809-73223828 Msa0223610:intron 30.0%
AGAGGTAAGACATATTTGTT+TGG + chr2_1:73224059-73224078 Msa0223610:intron 30.0%
GAGGTAAGACATATTTGTTT+GGG + chr2_1:73224060-73224079 Msa0223610:intron 30.0%
AATAATTCTTTGCATGTTGG+TGG + chr2_1:73224677-73224696 Msa0223610:intron 30.0%
ATAATTCTTTGCATGTTGGT+GGG + chr2_1:73224678-73224697 Msa0223610:intron 30.0%
TGACTAAAATAAAAGAGGGT+TGG - chr2_1:73224794-73224813 None:intergenic 30.0%
!!! TTAGTCATTGCTATTTTGCA+TGG + chr2_1:73224807-73224826 Msa0223610:intron 30.0%
CAGAAGAAATAAGATCGTTA+TGG - chr2_1:73224896-73224915 None:intergenic 30.0%
!!! TTTGTTTTGTTTAGACCAAG+TGG + chr2_1:73224921-73224940 Msa0223610:intron 30.0%
AATGTAAGTTGCATTTGGAT+TGG + chr2_1:73225037-73225056 Msa0223610:intron 30.0%
! TTTTATGCTTGTAGAACTTC+GGG + chr2_1:73225254-73225273 Msa0223610:intron 30.0%
ATACATATAAAAAGCCACGA+CGG - chr2_1:73225339-73225358 None:intergenic 30.0%
!!! ATTTTTGGTTTTCTGAGTTG+AGG + chr2_1:73225365-73225384 Msa0223610:intron 30.0%
! AAATGCAGTTTTCTTGTAGT+TGG + chr2_1:73225420-73225439 Msa0223610:intron 30.0%
TCATATCATGTCTTCTATGA+TGG - chr2_1:73225469-73225488 None:intergenic 30.0%
ATGATATGACTAAGAATGAC+AGG + chr2_1:73225480-73225499 Msa0223610:intron 30.0%
AGAAAGTTAGAGTAACCAAT+TGG + chr2_1:73225510-73225529 Msa0223610:intron 30.0%
GAAAGTTAGAGTAACCAATT+GGG + chr2_1:73225511-73225530 Msa0223610:intron 30.0%
GATTAAGAAAGGATATTGCA+CGG + chr2_1:73225804-73225823 Msa0223610:intron 30.0%
GTTCCAGACAAATTTAACAT+TGG - chr2_1:73225878-73225897 None:intergenic 30.0%
TTTCACAGTTTAACTCGAAA+TGG + chr2_1:73226027-73226046 Msa0223610:intron 30.0%
CATTCTTTCAAATGAAGTGA+GGG - chr2_1:73226080-73226099 None:intergenic 30.0%
TCATTCTTTCAAATGAAGTG+AGG - chr2_1:73226081-73226100 None:intergenic 30.0%
CACTGTAATAGTGTATGTAA+TGG - chr2_1:73226258-73226277 None:intergenic 30.0%
CAAAATTCAAATTTGCAAGG+TGG - chr2_1:73226427-73226446 None:intergenic 30.0%
CAGCAAAATTCAAATTTGCA+AGG - chr2_1:73226430-73226449 None:intergenic 30.0%
! CTTGCAAATTTGAATTTTGC+TGG + chr2_1:73226428-73226447 Msa0223610:CDS 30.0%
!!! TTATTTTTGCAACCTTGTCA+TGG + chr2_1:73226603-73226622 Msa0223610:intron 30.0%
! TAATCTCCTTTTATCTACAC+AGG + chr2_1:73226682-73226701 Msa0223610:intron 30.0%
AGAAATGGCAAAGAATTCAT+TGG + chr2_1:73226937-73226956 Msa0223610:CDS 30.0%
ACAGAAAGGGAAAAAAAGTA+TGG - chr2_1:73227021-73227040 None:intergenic 30.0%
CAGAAGATACTAAACAGAAA+GGG - chr2_1:73227034-73227053 None:intergenic 30.0%
ACAGAAGATACTAAACAGAA+AGG - chr2_1:73227035-73227054 None:intergenic 30.0%
! CAACACAGAACATAGAATTT+TGG - chr2_1:73227261-73227280 None:intergenic 30.0%
AATCACATAGAATTGGATCT+GGG + chr2_1:73227403-73227422 Msa0223610:intron 30.0%
! ACTAAACTGTCTAAAATAGC+CGG + chr2_1:73227444-73227463 Msa0223610:intron 30.0%
CCATCTGCCAATAAAAAAAA+AGG - chr2_1:73227644-73227663 None:intergenic 30.0%
!!! CCTTTTTTTTTATTGGCAGA+TGG + chr2_1:73227641-73227660 Msa0223610:intron 30.0%
CATTGTTTAAATTACACGGA+TGG - chr2_1:73228000-73228019 None:intergenic 30.0%
AAAATGTTTAATCTTAGGCC+AGG - chr2_1:73228077-73228096 None:intergenic 30.0%
!!! TTTTTTAGCATGCTCATGTT+CGG - chr2_1:73228481-73228500 None:intergenic 30.0%
TTAGATATGTCTTGCATTTG+TGG + chr2_1:73228558-73228577 Msa0223610:intron 30.0%
! ATTTTTCTTATCTTCAGGTG+AGG + chr2_1:73228607-73228626 Msa0223610:intron 30.0%
AATCGTTGAATTCTTTAGAC+GGG - chr2_1:73228703-73228722 None:intergenic 30.0%
AGTAAGTAAGAACATTTACC+TGG - chr2_1:73228750-73228769 None:intergenic 30.0%
!!! GCTTATATACCATTTTTGGT+TGG + chr2_1:73228801-73228820 Msa0223610:intron 30.0%
! TGCTTTTCCTTCAAATGTTT+TGG + chr2_1:73229035-73229054 Msa0223610:intron 30.0%
AAGTACTCCAAAACATTTGA+AGG - chr2_1:73229045-73229064 None:intergenic 30.0%
GTAAATCAAACCATACCATT+TGG - chr2_1:73229167-73229186 None:intergenic 30.0%
TTATGTGATGTGGATAGTAA+TGG + chr2_1:73229256-73229275 Msa0223610:CDS 30.0%
ATTATCATCAGTTAATCTGC+TGG - chr2_1:73229374-73229393 None:intergenic 30.0%
! GATTAACTGATGATAATGAG+TGG + chr2_1:73229377-73229396 Msa0223610:CDS 30.0%
! CATTTCAACTTTTGATGTGT+TGG - chr2_1:73229510-73229529 None:intergenic 30.0%
CAACACATCAAAAGTTGAAA+TGG + chr2_1:73229508-73229527 Msa0223610:three_prime_UTR 30.0%
ATCAAAAGTTGAAATGGAGT+CGG + chr2_1:73229514-73229533 Msa0223610:three_prime_UTR 30.0%
TAATATAAACAGGATGAAGG+GGG + chr2_1:73229584-73229603 Msa0223610:three_prime_UTR 30.0%
AAATTAGGAATGTACCCAAA+AGG - chr2_1:73229644-73229663 None:intergenic 30.0%
!!! TACAATTGGTTTTATGCAAC+AGG + chr2_1:73229719-73229738 Msa0223610:intron 30.0%
CTGTAACTGAACATCTTATA+TGG + chr2_1:73229745-73229764 Msa0223610:three_prime_UTR 30.0%
AGTCATTTGTGTATAAGCTT+GGG + chr2_1:73229854-73229873 Msa0223610:three_prime_UTR 30.0%
! GTGTTATGTGTGTAGCTTTA+TGG - chr2_1:73222755-73222774 None:intergenic 35.0%
!! CAAATGGATTTTGAGGAAAG+CGG - chr2_1:73222840-73222859 None:intergenic 35.0%
!! CCCTAATCAAATGGATTTTG+AGG - chr2_1:73222847-73222866 None:intergenic 35.0%
!!! TGATTAGGGTTTTTTCACCA+TGG + chr2_1:73222858-73222877 Msa0223610:exon 35.0%
ATGCATATCATCAGAATCCA+TGG - chr2_1:73222878-73222897 None:intergenic 35.0%
! TAATAGCTAGTTTGGTATCG+AGG - chr2_1:73223352-73223371 None:intergenic 35.0%
TCGATACCAAACTAGCTATT+AGG + chr2_1:73223351-73223370 Msa0223610:intron 35.0%
ATACCAAACTAGCTATTAGG+TGG + chr2_1:73223354-73223373 Msa0223610:intron 35.0%
!! CCTCAAAGAGTACTAACAAA+AGG - chr2_1:73223542-73223561 None:intergenic 35.0%
! CCTTTTGTTAGTACTCTTTG+AGG + chr2_1:73223539-73223558 Msa0223610:intron 35.0%
TCCTACTTCGTCATTACAAT+TGG + chr2_1:73223788-73223807 Msa0223610:CDS 35.0%
ACCAATTGTAATGACGAAGT+AGG - chr2_1:73223792-73223811 None:intergenic 35.0%
GTACTAATGGAGATATGGAT+TGG + chr2_1:73223926-73223945 Msa0223610:intron 35.0%
TCAGTAATGTTAATGACGCT+TGG + chr2_1:73223962-73223981 Msa0223610:CDS 35.0%
! TTTTCTTGTCTACTGCTGTT+TGG + chr2_1:73224112-73224131 Msa0223610:intron 35.0%
! TTTCTTGTCTACTGCTGTTT+GGG + chr2_1:73224113-73224132 Msa0223610:intron 35.0%
AGCATGAAAAACAGTATGGA+TGG - chr2_1:73224248-73224267 None:intergenic 35.0%
!! ATCCATACTGTTTTTCATGC+TGG + chr2_1:73224247-73224266 Msa0223610:CDS 35.0%
!! TCCATACTGTTTTTCATGCT+GGG + chr2_1:73224248-73224267 Msa0223610:CDS 35.0%
! GTCTATCCTTTTTATATGCC+AGG + chr2_1:73224365-73224384 Msa0223610:intron 35.0%
! ATTGAAGTGCCAATATATCC+TGG - chr2_1:73224386-73224405 None:intergenic 35.0%
ATTGGCACTTCAATTAACGA+TGG + chr2_1:73224392-73224411 Msa0223610:CDS 35.0%
ATTTGCCCTAATTTATCACC+TGG + chr2_1:73224706-73224725 Msa0223610:intron 35.0%
TTCCAAAATTGTGTGATGTG+TGG + chr2_1:73224744-73224763 Msa0223610:intron 35.0%
! AACCACACATCACACAATTT+TGG - chr2_1:73224749-73224768 None:intergenic 35.0%
GGCAATGAGATAGAAAAAAG+AGG - chr2_1:73224856-73224875 None:intergenic 35.0%
!! CATGCAGTTAATTTTGATGC+TGG + chr2_1:73224965-73224984 Msa0223610:CDS 35.0%
AGCAAAAGCTATATGAACAG+AGG - chr2_1:73225015-73225034 None:intergenic 35.0%
! TCTGTTCATATAGCTTTTGC+TGG + chr2_1:73225014-73225033 Msa0223610:CDS 35.0%
!! TGGATTGGTTCAAATTGTCA+TGG + chr2_1:73225052-73225071 Msa0223610:intron 35.0%
! TCTGTACCAGTTCATGTTTT+CGG - chr2_1:73225207-73225226 None:intergenic 35.0%
TGTAAAGTTTCCATACAGGT+GGG + chr2_1:73225540-73225559 Msa0223610:intron 35.0%
ATATGATTTACCCACCTGTA+TGG - chr2_1:73225553-73225572 None:intergenic 35.0%
ATACAGGTGGGTAAATCATA+TGG + chr2_1:73225552-73225571 Msa0223610:intron 35.0%
GAGAGACCAAAAAATACTCT+AGG + chr2_1:73225598-73225617 Msa0223610:intron 35.0%
!!! GTTTCGCCTAGAGTATTTTT+TGG - chr2_1:73225607-73225626 None:intergenic 35.0%
TAGAGTCTTTCTTTGCCTAA+TGG - chr2_1:73225629-73225648 None:intergenic 35.0%
ATTAGGCAAAGAAAGACTCT+AGG + chr2_1:73225628-73225647 Msa0223610:intron 35.0%
ATGGATCAATAGTCACCATA+AGG - chr2_1:73225723-73225742 None:intergenic 35.0%
GCATCTAATGGCAAAAACTT+TGG + chr2_1:73225761-73225780 Msa0223610:intron 35.0%
CAATTCCCTAACCATGTTTA+GGG - chr2_1:73225830-73225849 None:intergenic 35.0%
TCAATTCCCTAACCATGTTT+AGG - chr2_1:73225831-73225850 None:intergenic 35.0%
TAAACATGGTTAGGGAATTG+AGG + chr2_1:73225830-73225849 Msa0223610:intron 35.0%
TAGGGAATTGAGGATATTAG+TGG + chr2_1:73225840-73225859 Msa0223610:intron 35.0%
AAACACTCAAACAGAGGTTA+AGG + chr2_1:73225985-73226004 Msa0223610:intron 35.0%
GAAGTAAGTATAAGACACAG+TGG + chr2_1:73226108-73226127 Msa0223610:intron 35.0%
AGACCGATTGAAAAAAACCA+AGG + chr2_1:73226379-73226398 Msa0223610:CDS 35.0%
GACCGATTGAAAAAAACCAA+GGG + chr2_1:73226380-73226399 Msa0223610:CDS 35.0%
!!! CACCCTTGGTTTTTTTCAAT+CGG - chr2_1:73226385-73226404 None:intergenic 35.0%
AAATTATATTAGGGAAGGGG+AGG - chr2_1:73226509-73226528 None:intergenic 35.0%
TCGTGCAATGATGCAAATTA+TGG + chr2_1:73226547-73226566 Msa0223610:intron 35.0%
CGTGCAATGATGCAAATTAT+GGG + chr2_1:73226548-73226567 Msa0223610:intron 35.0%
!! AAAAGCATCATTAATCCCCA+GGG - chr2_1:73226583-73226602 None:intergenic 35.0%
!! AAAAAGCATCATTAATCCCC+AGG - chr2_1:73226584-73226603 None:intergenic 35.0%
TTATGAAGCAGCTAAACAAG+AGG + chr2_1:73226767-73226786 Msa0223610:CDS 35.0%
TATGAAGCAGCTAAACAAGA+GGG + chr2_1:73226768-73226787 Msa0223610:CDS 35.0%
GGTACACACATTATTATGAG+CGG + chr2_1:73226963-73226982 Msa0223610:CDS 35.0%
! AAGGGAAAAAAAGTATGGAG+TGG - chr2_1:73227016-73227035 None:intergenic 35.0%
ACTAGAATTCCTATGGTGTA+AGG + chr2_1:73227109-73227128 Msa0223610:intron 35.0%
! ATCATATAGCCTTACACCAT+AGG - chr2_1:73227121-73227140 None:intergenic 35.0%
! TTTTCTTTCTCTTGCAGTCA+AGG + chr2_1:73227144-73227163 Msa0223610:intron 35.0%
TTACATGAACAGTTTGCATC+TGG - chr2_1:73227193-73227212 None:intergenic 35.0%
! ACACACACATTTTCTGTGTT+TGG + chr2_1:73227216-73227235 Msa0223610:intron 35.0%
! TAGCGTCAAAGATGTTCTTT+TGG - chr2_1:73227300-73227319 None:intergenic 35.0%
GAGTATGTTTGACAACTTTC+AGG + chr2_1:73227337-73227356 Msa0223610:intron 35.0%
CAATCACATAGAATTGGATC+TGG + chr2_1:73227402-73227421 Msa0223610:intron 35.0%
AAAATAGCCGGATTAAGTCT+TGG + chr2_1:73227456-73227475 Msa0223610:intron 35.0%
! GTAAAAATCGTGTCATTCAG+AGG + chr2_1:73227769-73227788 Msa0223610:intron 35.0%
AAATTACACGGATGGAAACA+AGG - chr2_1:73227992-73228011 None:intergenic 35.0%
!! GTTGTTTTGTAATCAACTCC+TGG + chr2_1:73228056-73228075 Msa0223610:intron 35.0%
AAATCACTGTTTGATGAGCT+TGG + chr2_1:73228218-73228237 Msa0223610:intron 35.0%
ACTACTCAACAGTCTAACAA+GGG - chr2_1:73228262-73228281 None:intergenic 35.0%
TTGAAGTGGACATATGCATA+TGG + chr2_1:73228444-73228463 Msa0223610:CDS 35.0%
! GAATACTTGGAGTTCCTTTT+CGG - chr2_1:73228666-73228685 None:intergenic 35.0%
! TGTACAAAGTGTCTCTTTCA+AGG - chr2_1:73228870-73228889 None:intergenic 35.0%
!! TCACGTCTTAAGTTGGAATA+TGG + chr2_1:73228922-73228941 Msa0223610:intron 35.0%
AGTCACACTGCAAAAACAAA+TGG - chr2_1:73229194-73229213 None:intergenic 35.0%
ACTTCTTCGAGAATTTGGTT+AGG + chr2_1:73229218-73229237 Msa0223610:CDS 35.0%
CTTCTTCGAGAATTTGGTTA+GGG + chr2_1:73229219-73229238 Msa0223610:CDS 35.0%
AGAGAATGGTTTATGTGATG+TGG + chr2_1:73229246-73229265 Msa0223610:CDS 35.0%
AGCAACGAGTTCAAAAAATG+CGG + chr2_1:73229294-73229313 Msa0223610:CDS 35.0%
CGGTAATCATATTTATGTGC+TGG + chr2_1:73229534-73229553 Msa0223610:three_prime_UTR 35.0%
!!! TGTGCTGGTTTCTTTTTGTA+AGG + chr2_1:73229549-73229568 Msa0223610:three_prime_UTR 35.0%
GAGTCATTTGTGTATAAGCT+TGG + chr2_1:73229853-73229872 Msa0223610:three_prime_UTR 35.0%
GTCATTTGTGTATAAGCTTG+GGG + chr2_1:73229855-73229874 Msa0223610:three_prime_UTR 35.0%
ACCAATGTGAGGCTTGAATT+GGG - chr2_1:73222715-73222734 None:intergenic 40.0%
AACCAATGTGAGGCTTGAAT+TGG - chr2_1:73222716-73222735 None:intergenic 40.0%
!! TTCAAGCCTCACATTGGTTT+AGG + chr2_1:73222717-73222736 Msa0223610:five_prime_UTR 40.0%
TCTTCTCCTAAACCAATGTG+AGG - chr2_1:73222726-73222745 None:intergenic 40.0%
CACACACAATTAGGGGAATT+CGG - chr2_1:73222797-73222816 None:intergenic 40.0%
! ATCTAGGGCACACACAATTA+GGG - chr2_1:73222805-73222824 None:intergenic 40.0%
! AATCTAGGGCACACACAATT+AGG - chr2_1:73222806-73222825 None:intergenic 40.0%
ACTGTAGAAATCGTCATCGA+GGG - chr2_1:73222920-73222939 None:intergenic 40.0%
TGATATTGTATTGAGTGGGG+TGG + chr2_1:73223275-73223294 Msa0223610:intron 40.0%
TTGCCACCTAATAGCTAGTT+TGG - chr2_1:73223360-73223379 None:intergenic 40.0%
!! AGTGGTAAAATGACTAGCCT+TGG + chr2_1:73223458-73223477 Msa0223610:intron 40.0%
!! AAAATGACTAGCCTTGGACT+TGG + chr2_1:73223464-73223483 Msa0223610:intron 40.0%
ATAAATTTACGGTGAGGGGA+TGG - chr2_1:73223596-73223615 None:intergenic 40.0%
AAGAATCAGATATCCGGGAA+CGG + chr2_1:73223704-73223723 Msa0223610:CDS 40.0%
CATGTGACCCAAAAAGATGA+TGG - chr2_1:73223819-73223838 None:intergenic 40.0%
GATAGAGTCCGAAGAAAAGT+TGG + chr2_1:73223997-73224016 Msa0223610:CDS 40.0%
! CCAACAAGCCAACTTTTCTT+CGG - chr2_1:73224008-73224027 None:intergenic 40.0%
GCATCAGGATTCTCATAAAC+TGG - chr2_1:73224036-73224055 None:intergenic 40.0%
TGAGAATCCTGATGCTAAAG+AGG + chr2_1:73224041-73224060 Msa0223610:CDS 40.0%
TGTCTTACCTCTTTAGCATC+AGG - chr2_1:73224051-73224070 None:intergenic 40.0%
!! GAAGCACTGTGAATCTTAGA+AGG - chr2_1:73224219-73224238 None:intergenic 40.0%
AAGATTCACAGTGCTTCTTG+CGG + chr2_1:73224222-73224241 Msa0223610:CDS 40.0%
!! CCATACTGTTTTTCATGCTG+GGG + chr2_1:73224249-73224268 Msa0223610:CDS 40.0%
CACTTCAATTAACGATGGTC+CGG + chr2_1:73224397-73224416 Msa0223610:CDS 40.0%
ACTTCAATTAACGATGGTCC+GGG + chr2_1:73224398-73224417 Msa0223610:CDS 40.0%
CGTAGCCAGGTGATAAATTA+GGG - chr2_1:73224714-73224733 None:intergenic 40.0%
TTAACTGCATGTTCACAACC+AGG - chr2_1:73224956-73224975 None:intergenic 40.0%
!! GCAGTTAATTTTGATGCTGG+TGG + chr2_1:73224968-73224987 Msa0223610:CDS 40.0%
GCTGGAATGTAAGTTGCATT+TGG + chr2_1:73225032-73225051 Msa0223610:intron 40.0%
! CAATCTAAAGTGCACTGAAG+AGG + chr2_1:73225121-73225140 Msa0223610:intron 40.0%
CAGAATCCGAAAACATGAAC+TGG + chr2_1:73225198-73225217 Msa0223610:CDS 40.0%
! TGCAGTTTTCTTGTAGTTGG+AGG + chr2_1:73225423-73225442 Msa0223610:intron 40.0%
! GCAGTTTTCTTGTAGTTGGA+GGG + chr2_1:73225424-73225443 Msa0223610:intron 40.0%
! CAGTTTTCTTGTAGTTGGAG+GGG + chr2_1:73225425-73225444 Msa0223610:intron 40.0%
ACTTTACACGCATTCCCAAT+TGG - chr2_1:73225528-73225547 None:intergenic 40.0%
TGCGTGTAAAGTTTCCATAC+AGG + chr2_1:73225536-73225555 Msa0223610:intron 40.0%
GTGTAAAGTTTCCATACAGG+TGG + chr2_1:73225539-73225558 Msa0223610:intron 40.0%
AGGTGGGTAAATCATATGGA+GGG + chr2_1:73225556-73225575 Msa0223610:intron 40.0%
ATACTCTAGGCGAAACCATT+AGG + chr2_1:73225611-73225630 Msa0223610:intron 40.0%
CCAAATCCTTCCTAATGCTT+TGG - chr2_1:73225654-73225673 None:intergenic 40.0%
! CCAAAGCATTAGGAAGGATT+TGG + chr2_1:73225651-73225670 Msa0223610:intron 40.0%
GTATTCATGATGGCACCTTA+TGG + chr2_1:73225705-73225724 Msa0223610:intron 40.0%
ATTAGATGCGATCAGGTGAT+GGG - chr2_1:73225750-73225769 None:intergenic 40.0%
! TTTTGCCATTAGATGCGATC+AGG - chr2_1:73225757-73225776 None:intergenic 40.0%
TATGGGAGCAAAACACTCAT+GGG - chr2_1:73225926-73225945 None:intergenic 40.0%
ATATGGGAGCAAAACACTCA+TGG - chr2_1:73225927-73225946 None:intergenic 40.0%
CTCAAACAGAGGTTAAGGAT+TGG + chr2_1:73225990-73226009 Msa0223610:intron 40.0%
AAGCAGTTCACTGAGCATTA+AGG - chr2_1:73226188-73226207 None:intergenic 40.0%
!!! ATTATGGGTTTTTTTGCCCC+TGG + chr2_1:73226563-73226582 Msa0223610:intron 40.0%
!!! TTATGGGTTTTTTTGCCCCT+GGG + chr2_1:73226564-73226583 Msa0223610:intron 40.0%
! AAAGCATCATTAATCCCCAG+GGG - chr2_1:73226582-73226601 None:intergenic 40.0%
TCAATCCATAAGCCATGACA+AGG - chr2_1:73226618-73226637 None:intergenic 40.0%
GCATAGCCTGTGTAGATAAA+AGG - chr2_1:73226691-73226710 None:intergenic 40.0%
ATGAAGCAGCTAAACAAGAG+GGG + chr2_1:73226769-73226788 Msa0223610:CDS 40.0%
CAAAAATGTCTCGGGAATGT+GGG - chr2_1:73226854-73226873 None:intergenic 40.0%
ACAAAAATGTCTCGGGAATG+TGG - chr2_1:73226855-73226874 None:intergenic 40.0%
TGGCAAAGAATTCATTGGAG+AGG + chr2_1:73226942-73226961 Msa0223610:CDS 40.0%
ACACACATTATTATGAGCGG+TGG + chr2_1:73226966-73226985 Msa0223610:CDS 40.0%
CACACATTATTATGAGCGGT+GGG + chr2_1:73226967-73226986 Msa0223610:CDS 40.0%
TTTGGTCATCTTACCTTCCT+TGG + chr2_1:73227234-73227253 Msa0223610:intron 40.0%
TTGGTCATCTTACCTTCCTT+GGG + chr2_1:73227235-73227254 Msa0223610:intron 40.0%
!! ATAGAATTTTGGCCCAAGGA+AGG - chr2_1:73227250-73227269 None:intergenic 40.0%
!! GAACATAGAATTTTGGCCCA+AGG - chr2_1:73227254-73227273 None:intergenic 40.0%
TTCTGTGTTGCATGTGACTT+TGG + chr2_1:73227271-73227290 Msa0223610:intron 40.0%
!!! ATTGGATCTGGGAAGCATTT+TGG + chr2_1:73227414-73227433 Msa0223610:intron 40.0%
! AGCGGTAAGCAATAATGGAA+AGG - chr2_1:73227482-73227501 None:intergenic 40.0%
TTTGCAGCGGTAAGCAATAA+TGG - chr2_1:73227487-73227506 None:intergenic 40.0%
TGAAAAGAGCAGATTTGCAG+CGG - chr2_1:73227500-73227519 None:intergenic 40.0%
! ACTTAAGTTGTGACTCAGGT+TGG - chr2_1:73227689-73227708 None:intergenic 40.0%
ATTTACCTGTAACCAAGCCT+CGG - chr2_1:73227718-73227737 None:intergenic 40.0%
TTGACTGAACTGATGCAATG+TGG + chr2_1:73227808-73227827 Msa0223610:intron 40.0%
AGTGATTTGAGTCATGAACC+CGG - chr2_1:73228206-73228225 None:intergenic 40.0%
GACTACTCAACAGTCTAACA+AGG - chr2_1:73228263-73228282 None:intergenic 40.0%
! TTTTTCATAAACCCGTCCCA+AGG + chr2_1:73228286-73228305 Msa0223610:intron 40.0%
ACAGCTTCATTTGTGTCCTT+GGG - chr2_1:73228305-73228324 None:intergenic 40.0%
AACAGCTTCATTTGTGTCCT+TGG - chr2_1:73228306-73228325 None:intergenic 40.0%
CAGTTCTTTGAGTACTTGCA+AGG + chr2_1:73228501-73228520 Msa0223610:CDS 40.0%
AAGGAACTCCAAGTATTCCT+CGG + chr2_1:73228668-73228687 Msa0223610:CDS 40.0%
!!! ATACCATTTTTGGTTGGGAC+TGG + chr2_1:73228807-73228826 Msa0223610:intron 40.0%
TTCAAGGAAACTCGAGGAAA+AGG - chr2_1:73228854-73228873 None:intergenic 40.0%
TCTGCTATCACGTCTTAAGT+TGG + chr2_1:73228915-73228934 Msa0223610:intron 40.0%
TCTTTGTTGGTGTGGCAATT+TGG + chr2_1:73229076-73229095 Msa0223610:intron 40.0%
! TTGGTTAGGGCATTAGAGAA+TGG + chr2_1:73229232-73229251 Msa0223610:CDS 40.0%
ATCAGTTAATCTGCTGGACA+CGG - chr2_1:73229368-73229387 None:intergenic 40.0%
CAGTGTACCTATGCAAATGT+CGG + chr2_1:73229409-73229428 Msa0223610:CDS 40.0%
!! AGAAGACGTGTGTTTCTAGT+GGG - chr2_1:73229478-73229497 None:intergenic 40.0%
GCTTATACACAAATGACTCG+AGG - chr2_1:73229852-73229871 None:intergenic 40.0%
CCAATGTGAGGCTTGAATTG+GGG - chr2_1:73222714-73222733 None:intergenic 45.0%
! TCTAGGGCACACACAATTAG+GGG - chr2_1:73222804-73222823 None:intergenic 45.0%
CGGTGGGTAGAGAAAATCTA+GGG - chr2_1:73222820-73222839 None:intergenic 45.0%
!! TGGATTTTGAGGAAAGCGGT+GGG - chr2_1:73222836-73222855 None:intergenic 45.0%
!! ATGGATTTTGAGGAAAGCGG+TGG - chr2_1:73222837-73222856 None:intergenic 45.0%
ATCGAGGGATTCAACATCGT+TGG - chr2_1:73222905-73222924 None:intergenic 45.0%
CACTGTAGAAATCGTCATCG+AGG - chr2_1:73222921-73222940 None:intergenic 45.0%
CTCGATGACGATTTCTACAG+TGG + chr2_1:73222919-73222938 Msa0223610:CDS 45.0%
CTGATGATTCTGCTCAGTCT+CGG + chr2_1:73223052-73223071 Msa0223610:CDS 45.0%
! AGCTAGTTTGGTATCGAGGT+GGG - chr2_1:73223348-73223367 None:intergenic 45.0%
! TAGCTAGTTTGGTATCGAGG+TGG - chr2_1:73223349-73223368 None:intergenic 45.0%
! ATTCCAAGGGTTTGGTCTAG+TGG + chr2_1:73223440-73223459 Msa0223610:intron 45.0%
TTACCACTAGACCAAACCCT+TGG - chr2_1:73223446-73223465 None:intergenic 45.0%
AGCCTTGGACTTGGAATTTC+TGG + chr2_1:73223473-73223492 Msa0223610:intron 45.0%
GCCTTGGACTTGGAATTTCT+GGG + chr2_1:73223474-73223493 Msa0223610:intron 45.0%
ACCCAGAAATTCCAAGTCCA+AGG - chr2_1:73223478-73223497 None:intergenic 45.0%
AGCTCGCTAGTGTCCTTTAA+AGG + chr2_1:73223501-73223520 Msa0223610:intron 45.0%
GCTCGCTAGTGTCCTTTAAA+GGG + chr2_1:73223502-73223521 Msa0223610:intron 45.0%
GTCTAAGTTCGTCACTGTCT+TGG + chr2_1:73223561-73223580 Msa0223610:intron 45.0%
!! GAGATATGGATTGGTGATGC+AGG + chr2_1:73223935-73223954 Msa0223610:intron 45.0%
!! CCGAAGAAAAGTTGGCTTGT+TGG + chr2_1:73224005-73224024 Msa0223610:CDS 45.0%
GTTAACAGCTTTCCCGTATG+TGG + chr2_1:73224156-73224175 Msa0223610:intron 45.0%
CCCCAGCATGAAAAACAGTA+TGG - chr2_1:73224252-73224271 None:intergenic 45.0%
!! TACTGTTTTTCATGCTGGGG+AGG + chr2_1:73224252-73224271 Msa0223610:CDS 45.0%
CATCTTAGCATCAAGCATCC+CGG - chr2_1:73224419-73224438 None:intergenic 45.0%
GCGTAGCCAGGTGATAAATT+AGG - chr2_1:73224715-73224734 None:intergenic 45.0%
ATTTATCACCTGGCTACGCT+TGG + chr2_1:73224716-73224735 Msa0223610:intron 45.0%
TTTATCACCTGGCTACGCTT+GGG + chr2_1:73224717-73224736 Msa0223610:intron 45.0%
ATGGGTGAGTTATGACTGAG+AGG - chr2_1:73224877-73224896 None:intergenic 45.0%
!! GTTTTCTGAGTTGAGGCTGA+TGG + chr2_1:73225372-73225391 Msa0223610:intron 45.0%
CTGCATTTCTTGATATCCCC+CGG - chr2_1:73225408-73225427 None:intergenic 45.0%
TTGGAGGGGATGTTTCACTT+CGG + chr2_1:73225439-73225458 Msa0223610:intron 45.0%
CAGGTGGGTAAATCATATGG+AGG + chr2_1:73225555-73225574 Msa0223610:intron 45.0%
ATGGAGGGATAGTCAGATAG+AGG + chr2_1:73225571-73225590 Msa0223610:intron 45.0%
! AGACTCTAGGCCAAAGCATT+AGG + chr2_1:73225641-73225660 Msa0223610:intron 45.0%
! TCTAGGCCAAAGCATTAGGA+AGG + chr2_1:73225645-73225664 Msa0223610:intron 45.0%
CATTAGATGCGATCAGGTGA+TGG - chr2_1:73225751-73225770 None:intergenic 45.0%
CATCACCTGATCGCATCTAA+TGG + chr2_1:73225749-73225768 Msa0223610:intron 45.0%
ATATTGCACGGCCCTAAACA+TGG + chr2_1:73225816-73225835 Msa0223610:intron 45.0%
AAATGGCCAAATGATAGCCG+AGG + chr2_1:73226044-73226063 Msa0223610:intron 45.0%
AATGCTCAGTGAACTGCTTC+AGG + chr2_1:73226189-73226208 Msa0223610:intron 45.0%
GACACAGTATCACTGTCTAG+TGG - chr2_1:73226223-73226242 None:intergenic 45.0%
TCAATCGGTCTCTTGCACTT+GGG - chr2_1:73226370-73226389 None:intergenic 45.0%
TTCAATCGGTCTCTTGCACT+TGG - chr2_1:73226371-73226390 None:intergenic 45.0%
ATGTCATATGCATGCACCCT+TGG - chr2_1:73226399-73226418 None:intergenic 45.0%
!!! TATGGGTTTTTTTGCCCCTG+GGG + chr2_1:73226565-73226584 Msa0223610:intron 45.0%
TGCAACCTTGTCATGGCTTA+TGG + chr2_1:73226610-73226629 Msa0223610:intron 45.0%
TATCTACACAGGCTATGCCT+TGG + chr2_1:73226693-73226712 Msa0223610:intron 45.0%
TGAAGCAGCTAAACAAGAGG+GGG + chr2_1:73226770-73226789 Msa0223610:CDS 45.0%
GGAAAGGCCAAGACTTAATC+CGG - chr2_1:73227466-73227485 None:intergenic 45.0%
! TATAACCGAGGCTTGGTTAC+AGG + chr2_1:73227710-73227729 Msa0223610:CDS 45.0%
ACTGAACTGATGCAATGTGG+AGG + chr2_1:73227811-73227830 Msa0223610:intron 45.0%
CTGAACTGATGCAATGTGGA+GGG + chr2_1:73227812-73227831 Msa0223610:intron 45.0%
ATGCACTGCTGACAGAAACT+TGG + chr2_1:73227873-73227892 Msa0223610:intron 45.0%
TACACGGATGGAAACAAGGA+AGG - chr2_1:73227988-73228007 None:intergenic 45.0%
TTCATTTGTGTCCTTGGGAC+GGG - chr2_1:73228300-73228319 None:intergenic 45.0%
CTTCATTTGTGTCCTTGGGA+CGG - chr2_1:73228301-73228320 None:intergenic 45.0%
GCTTCATCAATGTGCCGAAA+AGG + chr2_1:73228649-73228668 Msa0223610:CDS 45.0%
! GATTTTCGCACCAAACTAGC+TGG + chr2_1:73228719-73228738 Msa0223610:CDS 45.0%
ACTCCAGTCCCAACCAAAAA+TGG - chr2_1:73228813-73228832 None:intergenic 45.0%
GTCTCTTTCAAGGAAACTCG+AGG - chr2_1:73228860-73228879 None:intergenic 45.0%
! CACTAATGATGGTGCCCAAA+TGG + chr2_1:73229149-73229168 Msa0223610:intron 45.0%
! ATGATGGTGCCCAAATGGTA+TGG + chr2_1:73229154-73229173 Msa0223610:intron 45.0%
! ACTCGTTGCTTTGCTTGTAG+CGG - chr2_1:73229284-73229303 None:intergenic 45.0%
ACGAGTTCAAAAAATGCGGC+AGG + chr2_1:73229298-73229317 Msa0223610:CDS 45.0%
CGAGTTCAAAAAATGCGGCA+GGG + chr2_1:73229299-73229318 Msa0223610:CDS 45.0%
AGTAAGGGAAAAAGCGGAAG+AGG + chr2_1:73229325-73229344 Msa0223610:CDS 45.0%
GGAAAAAGCGGAAGAGGAAA+GGG + chr2_1:73229331-73229350 Msa0223610:CDS 45.0%
GAAAAAGCGGAAGAGGAAAG+GGG + chr2_1:73229332-73229351 Msa0223610:CDS 45.0%
!! CAGAAGACGTGTGTTTCTAG+TGG - chr2_1:73229479-73229498 None:intergenic 45.0%
AACACACGTCTTCTGCTCAA+AGG + chr2_1:73229484-73229503 Msa0223610:three_prime_UTR 45.0%
! TATCCTCCTTGCACTCCTTT+TGG + chr2_1:73229626-73229645 Msa0223610:three_prime_UTR 45.0%
! ATCCTCCTTGCACTCCTTTT+GGG + chr2_1:73229627-73229646 Msa0223610:three_prime_UTR 45.0%
! ATGTACCCAAAAGGAGTGCA+AGG - chr2_1:73229635-73229654 None:intergenic 45.0%
!! ATTTAATATTTAATATAAAC+AGG + chr2_1:73229574-73229593 Msa0223610:three_prime_UTR 5.0%
CCCCAATTCAAGCCTCACAT+TGG + chr2_1:73222711-73222730 Msa0223610:five_prime_UTR 50.0%
GCGGTGGGTAGAGAAAATCT+AGG - chr2_1:73222821-73222840 None:intergenic 50.0%
TGAAACCGAAGATGCTCCCA+TGG + chr2_1:73222942-73222961 Msa0223610:CDS 50.0%
!! GTCATCCATGGGAGCATCTT+CGG - chr2_1:73222950-73222969 None:intergenic 50.0%
TCGTCGCTGTAGTCATCCAT+GGG - chr2_1:73222961-73222980 None:intergenic 50.0%
GGGGTGGTTTACTGCATGTT+TGG + chr2_1:73223291-73223310 Msa0223610:intron 50.0%
! TGGTATCGAGGTGGGTTTGT+CGG - chr2_1:73223340-73223359 None:intergenic 50.0%
! CGCTAGTGTCCTTTAAAGGG+AGG + chr2_1:73223505-73223524 Msa0223610:intron 50.0%
TATCATCTTCCTGCCGTTCC+CGG - chr2_1:73223720-73223739 None:intergenic 50.0%
AGTAGGATGCTTGCAGCAAC+TGG - chr2_1:73223775-73223794 None:intergenic 50.0%
CAAGTAAGCTGGCCACATAC+GGG - chr2_1:73224171-73224190 None:intergenic 50.0%
GCAAGTAAGCTGGCCACATA+CGG - chr2_1:73224172-73224191 None:intergenic 50.0%
GTATGTGGCCAGCTTACTTG+CGG + chr2_1:73224171-73224190 Msa0223610:intron 50.0%
AACAGATGCCGCAAGTAAGC+TGG - chr2_1:73224182-73224201 None:intergenic 50.0%
ATCAACAGCAGCACCACAAG+CGG - chr2_1:73224450-73224469 None:intergenic 50.0%
! ATTGTGGCACAGTGTCGAAG+TGG + chr2_1:73225159-73225178 Msa0223610:CDS 50.0%
GTTGAGGCTGATGGAGTTGA+TGG + chr2_1:73225381-73225400 Msa0223610:intron 50.0%
CACGGCCCTAAACATGGTTA+GGG + chr2_1:73225822-73225841 Msa0223610:intron 50.0%
ACACAGCCTCGGCTATCATT+TGG - chr2_1:73226053-73226072 None:intergenic 50.0%
AAATGATAGCCGAGGCTGTG+TGG + chr2_1:73226052-73226071 Msa0223610:intron 50.0%
ATATTAGGGAAGGGGAGGAG+AGG - chr2_1:73226504-73226523 None:intergenic 50.0%
CATGGTCAGACCATGGTGAA+AGG + chr2_1:73226718-73226737 Msa0223610:CDS 50.0%
TCAGACCATGGTGAAAGGAC+TGG + chr2_1:73226723-73226742 Msa0223610:CDS 50.0%
! GGGCTAGCAACCAATCTGTA+AGG + chr2_1:73226987-73227006 Msa0223610:intron 50.0%
GGAGTGGAAGCCTTACAGAT+TGG - chr2_1:73227000-73227019 None:intergenic 50.0%
TGCAGATAGTTGAGTGCAGG+CGG + chr2_1:73228418-73228437 Msa0223610:intron 50.0%
TCTTCAGGTGAGGCAGAATC+AGG + chr2_1:73228617-73228636 Msa0223610:intron 50.0%
AGGTGAGGCAGAATCAGGTT+TGG + chr2_1:73228622-73228641 Msa0223610:intron 50.0%
AGGCAGAATCAGGTTTGGAG+AGG + chr2_1:73228627-73228646 Msa0223610:CDS 50.0%
! CTTCAGCACCGAGGAATACT+TGG - chr2_1:73228679-73228698 None:intergenic 50.0%
!! CAAGTATTCCTCGGTGCTGA+AGG + chr2_1:73228677-73228696 Msa0223610:CDS 50.0%
CCTGGTCAATCCAGCTAGTT+TGG - chr2_1:73228732-73228751 None:intergenic 50.0%
CCAAACTAGCTGGATTGACC+AGG + chr2_1:73228729-73228748 Msa0223610:CDS 50.0%
GGGAGCAGTAAGGGAAAAAG+CGG + chr2_1:73229319-73229338 Msa0223610:CDS 50.0%
GGGAAAAAGCGGAAGAGGAA+AGG + chr2_1:73229330-73229349 Msa0223610:CDS 50.0%
GGCAGATCCGACATTTGCAT+AGG - chr2_1:73229419-73229438 None:intergenic 50.0%
! TACCCAAAAGGAGTGCAAGG+AGG - chr2_1:73229632-73229651 None:intergenic 50.0%
GTCGTCGCTGTAGTCATCCA+TGG - chr2_1:73222962-73222981 None:intergenic 55.0%
!! TGCTCAGTCTCGGAGTACTG+AGG + chr2_1:73223062-73223081 Msa0223610:CDS 55.0%
TTCGTCACTGTCTTGGACCG+CGG + chr2_1:73223568-73223587 Msa0223610:intron 55.0%
ATCAGATATCCGGGAACGGC+AGG + chr2_1:73223708-73223727 Msa0223610:CDS 55.0%
GCTTGCAGCAACTGGTGGTA+TGG - chr2_1:73223767-73223786 None:intergenic 55.0%
AGGATGCTTGCAGCAACTGG+TGG - chr2_1:73223772-73223791 None:intergenic 55.0%
AGATGTCCTGATCCCGCTTG+TGG + chr2_1:73224434-73224453 Msa0223610:CDS 55.0%
TCAACAGCAGCACCACAAGC+GGG - chr2_1:73224449-73224468 None:intergenic 55.0%
GAATTCACCCAAGCGTAGCC+AGG - chr2_1:73224727-73224746 None:intergenic 55.0%
GCATGTTCACAACCAGGAGC+AGG - chr2_1:73224950-73224969 None:intergenic 55.0%
CTGTGCCACAATCCACTGGA+CGG - chr2_1:73225151-73225170 None:intergenic 55.0%
GACACTGTGCCACAATCCAC+TGG - chr2_1:73225155-73225174 None:intergenic 55.0%
!! GGCTGATGGAGTTGATGGTC+CGG + chr2_1:73225386-73225405 Msa0223610:intron 55.0%
!! GCTGATGGAGTTGATGGTCC+GGG + chr2_1:73225387-73225406 Msa0223610:intron 55.0%
!! CTGATGGAGTTGATGGTCCG+GGG + chr2_1:73225388-73225407 Msa0223610:intron 55.0%
!! TGATGGAGTTGATGGTCCGG+GGG + chr2_1:73225389-73225408 Msa0223610:intron 55.0%
!! CGATCAGGTGATGGGCTACA+TGG - chr2_1:73225742-73225761 None:intergenic 55.0%
GCACGGCCCTAAACATGGTT+AGG + chr2_1:73225821-73225840 Msa0223610:intron 55.0%
GGTCTCTTGCACTTGGGACA+CGG - chr2_1:73226364-73226383 None:intergenic 55.0%
! ACAGGCTATGCCTTGGTGCA+TGG + chr2_1:73226700-73226719 Msa0223610:intron 55.0%
CATGGTCTGACCATGCACCA+AGG - chr2_1:73226713-73226732 None:intergenic 55.0%
! CTTGGTGCATGGTCAGACCA+TGG + chr2_1:73226711-73226730 Msa0223610:CDS 55.0%
GACCATGGTGAAAGGACTGG+CGG + chr2_1:73226726-73226745 Msa0223610:CDS 55.0%
AACCGCCAGTCCTTTCACCA+TGG - chr2_1:73226731-73226750 None:intergenic 55.0%
AGCAGCTAAACAAGAGGGGG+TGG + chr2_1:73226773-73226792 Msa0223610:CDS 55.0%
CGCTGCAGATAGTTGAGTGC+AGG + chr2_1:73228415-73228434 Msa0223610:intron 55.0%
GCAGATAGTTGAGTGCAGGC+GGG + chr2_1:73228419-73228438 Msa0223610:intron 55.0%
!! AGTGCAGGCGGGTATTGAAG+TGG + chr2_1:73228430-73228449 Msa0223610:CDS 55.0%
AAATGCGGCAGGGAGCAGTA+AGG + chr2_1:73229309-73229328 Msa0223610:CDS 55.0%
AATGCGGCAGGGAGCAGTAA+GGG + chr2_1:73229310-73229329 Msa0223610:CDS 55.0%
ATTGCACATCGCGCATGCAG+TGG - chr2_1:73229440-73229459 None:intergenic 55.0%
GCGCGATGTGCAATCAAGAG+CGG + chr2_1:73229446-73229465 Msa0223610:CDS 55.0%
ACCAAGTGGTGTCCTGCTCC+TGG + chr2_1:73224935-73224954 Msa0223610:CDS 60.0%
ACCAGGAGCAGGACACCACT+TGG - chr2_1:73224939-73224958 None:intergenic 60.0%
TGAAGAGGCTCACCGTCCAG+TGG + chr2_1:73225136-73225155 Msa0223610:CDS 60.0%
!! GCTCACCGTCCAGTGGATTG+TGG + chr2_1:73225143-73225162 Msa0223610:CDS 60.0%
GTGAGGGAACCACACAGCCT+CGG - chr2_1:73226064-73226083 None:intergenic 60.0%
ACGGTGAGGGGATGGTACCG+CGG - chr2_1:73223588-73223607 None:intergenic 65.0%
GCAGCACCACAAGCGGGATC+AGG - chr2_1:73224443-73224462 None:intergenic 65.0%
AAGTGGCTCGAGCTCCGTCG+TGG + chr2_1:73225322-73225341 Msa0223610:intron 65.0%
TAGACGGGCCTTCAGCACCG+AGG - chr2_1:73228688-73228707 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 73222710 73229910 73222710 ID=Msa0223610;Name=Msa0223610
chr2_1 mRNA 73222710 73229910 73222710 ID=Msa0223610-mRNA-1;Parent=Msa0223610;Name=Msa0223610-mRNA-1;_AED=0.11;_eAED=0.11;_QI=167|1|1|1|0.93|0.87|16|344|599
chr2_1 exon 73222710 73223083 73222710 ID=Msa0223610-mRNA-1:exon:21387;Parent=Msa0223610-mRNA-1
chr2_1 exon 73223685 73223809 73223685 ID=Msa0223610-mRNA-1:exon:21388;Parent=Msa0223610-mRNA-1
chr2_1 exon 73223957 73224062 73223957 ID=Msa0223610-mRNA-1:exon:21389;Parent=Msa0223610-mRNA-1
chr2_1 exon 73224183 73224273 73224183 ID=Msa0223610-mRNA-1:exon:21390;Parent=Msa0223610-mRNA-1
chr2_1 exon 73224387 73224559 73224387 ID=Msa0223610-mRNA-1:exon:21391;Parent=Msa0223610-mRNA-1
chr2_1 exon 73224935 73225039 73224935 ID=Msa0223610-mRNA-1:exon:21392;Parent=Msa0223610-mRNA-1
chr2_1 exon 73225131 73225219 73225131 ID=Msa0223610-mRNA-1:exon:21393;Parent=Msa0223610-mRNA-1
chr2_1 exon 73226342 73226449 73226342 ID=Msa0223610-mRNA-1:exon:21394;Parent=Msa0223610-mRNA-1
chr2_1 exon 73226704 73226794 73226704 ID=Msa0223610-mRNA-1:exon:21395;Parent=Msa0223610-mRNA-1
chr2_1 exon 73226914 73227003 73226914 ID=Msa0223610-mRNA-1:exon:21396;Parent=Msa0223610-mRNA-1
chr2_1 exon 73227161 73227208 73227161 ID=Msa0223610-mRNA-1:exon:21397;Parent=Msa0223610-mRNA-1
chr2_1 exon 73227660 73227731 73227660 ID=Msa0223610-mRNA-1:exon:21398;Parent=Msa0223610-mRNA-1
chr2_1 exon 73228423 73228522 73228423 ID=Msa0223610-mRNA-1:exon:21399;Parent=Msa0223610-mRNA-1
chr2_1 exon 73228624 73228750 73228624 ID=Msa0223610-mRNA-1:exon:21400;Parent=Msa0223610-mRNA-1
chr2_1 exon 73229207 73229648 73229207 ID=Msa0223610-mRNA-1:exon:21401;Parent=Msa0223610-mRNA-1
chr2_1 exon 73229741 73229910 73229741 ID=Msa0223610-mRNA-1:exon:21402;Parent=Msa0223610-mRNA-1
chr2_1 five_prime_UTR 73222710 73222876 73222710 ID=Msa0223610-mRNA-1:five_prime_utr;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73222877 73223083 73222877 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73223685 73223809 73223685 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73223957 73224062 73223957 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73224183 73224273 73224183 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73224387 73224559 73224387 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73224935 73225039 73224935 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73225131 73225219 73225131 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73226342 73226449 73226342 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73226704 73226794 73226704 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73226914 73227003 73226914 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73227161 73227208 73227161 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73227660 73227731 73227660 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73228423 73228522 73228423 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73228624 73228750 73228624 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 CDS 73229207 73229474 73229207 ID=Msa0223610-mRNA-1:cds;Parent=Msa0223610-mRNA-1
chr2_1 three_prime_UTR 73229475 73229648 73229475 ID=Msa0223610-mRNA-1:three_prime_utr;Parent=Msa0223610-mRNA-1
chr2_1 three_prime_UTR 73229741 73229910 73229741 ID=Msa0223610-mRNA-1:three_prime_utr;Parent=Msa0223610-mRNA-1
Gene Sequence

>Msa0223610

ATGGATTCTGATGATATGCATGATGCCAACGATGTTGAATCCCTCGATGACGATTTCTACAGTGGTGAAACCGAAGATGCTCCCATGGATGACTACAGCGACGACTACGATGAAGATGATAATAATAATAATAATGATAATAATGATGCTGATGATGATTACTTTGATGATGGTGCTGATGATTCTGCTCAGTCTCGGAGTACTGAGATAAATTTTGCCATATTGAAAGAATCAGATATCCGGGAACGGCAGGAAGATGATATTAGTAGTGTCGCAGCAGTTCTTTCCATACCACCAGTTGCTGCAAGCATCCTACTTCGTCATTACAATTGGAATGTCAGTAATGTTAATGACGCTTGGTTTGCTGACGAAGATAGAGTCCGAAGAAAAGTTGGCTTGTTGGAGAAGCCAGTTTATGAGAATCCTGATGCTAAAGAGCTTACTTGCGGCATCTGTTTTGAAGCTTATCGTCCTTCTAAGATTCACAGTGCTTCTTGCGGCCATCCATACTGTTTTTCATGCTGGGGAGGATATATTGGCACTTCAATTAACGATGGTCCGGGATGCTTGATGCTAAGATGTCCTGATCCCGCTTGTGGTGCTGCTGTTGATCAAGATATGATTAATCTTTTAGCATCTGCTGAAGATAAAGACAAGTATGACCGTTACCTTATTAGATCTTACATTGAAGACAATAAAAAGACCAAGTGGTGTCCTGCTCCTGGTTGTGAACATGCAGTTAATTTTGATGCTGGTGGTGAAAATTTTGACGTATCTTGCCTCTGTTCATATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCAGTGGATTGTGGCACAGTGTCGAAGTGGATTTTGAAAAACAGTGCAGAATCCGAAAACATGAACTGGATACTTGCTAACTCGAAGCCGTGTCCCAAGTGCAAGAGACCGATTGAAAAAAACCAAGGGTGCATGCATATGACATGCACTCCACCTTGCAAATTTGAATTTTGCTGGCTATGCCTTGGTGCATGGTCAGACCATGGTGAAAGGACTGGCGGTTTCTACGCTTGCAATCGTTATGAAGCAGCTAAACAAGAGGGGGTGTATGATGAAACTGAAAAAAGAAGAGAAATGGCAAAGAATTCATTGGAGAGGTACACACATTATTATGAGCGGTGGGCTAGCAACCAATCTTCAAGGCAAAAAGCTCTTGCTGATCTACACCAGATGCAAACTGTTCATATGGAGAAGCTTAGTGACACACAGTGCCAACCTGAGTCACAACTTAAGTTTATAACCGAGGCTTGGTTACAGATAGTTGAGTGCAGGCGGGTATTGAAGTGGACATATGCATATGGATACTATTTAGCCGAACATGAGCATGCTAAAAAACAGTTCTTTGAGTACTTGCAAGGTGAGGCAGAATCAGGTTTGGAGAGGCTTCATCAATGTGCCGAAAAGGAACTCCAAGTATTCCTCGGTGCTGAAGGCCCGTCTAAAGAATTCAACGATTTTCGCACCAAACTAGCTGGATTGACCAGTGTGACTAAAAACTTCTTCGAGAATTTGGTTAGGGCATTAGAGAATGGTTTATGTGATGTGGATAGTAATGGAGCCGCTACAAGCAAAGCAACGAGTTCAAAAAATGCGGCAGGGAGCAGTAAGGGAAAAAGCGGAAGAGGAAAGGGGACGAAAGCTACCGTGTCCAGCAGATTAACTGATGATAATGAGTGGTCTTGTGAGCAGTGTACCTATGCAAATGTCGGATCTGCCACTGCATGCGCGATGTGCAATCAAGAGCGGCAATGA
Protein sequence

>Msa0223610

MDSDDMHDANDVESLDDDFYSGETEDAPMDDYSDDYDEDDNNNNNDNNDADDDYFDDGADDSAQSRSTEINFAILKESDIRERQEDDISSVAAVLSIPPVAASILLRHYNWNVSNVNDAWFADEDRVRRKVGLLEKPVYENPDAKELTCGICFEAYRPSKIHSASCGHPYCFSCWGGYIGTSINDGPGCLMLRCPDPACGAAVDQDMINLLASAEDKDKYDRYLIRSYIEDNKKTKWCPAPGCEHAVNFDAGGENFDVSCLCSYSFCWNCTEEAHRPVDCGTVSKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETEKRREMAKNSLERYTHYYERWASNQSSRQKALADLHQMQTVHMEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLAEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQVFLGAEGPSKEFNDFRTKLAGLTSVTKNFFENLVRALENGLCDVDSNGAATSKATSSKNAAGSSKGKSGRGKGTKATVSSRLTDDNEWSCEQCTYANVGSATACAMCNQERQ*