AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0625440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625440 MtrunA17_Chr4g0000231 91.667 324 25 2 80 402 70 392 0.0 594
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625440 AT1G78915.1 61.316 380 120 6 31 402 24 384 4.04e-157 448
Msa0625440 AT1G78915.2 58.690 397 120 6 31 402 24 401 4.42e-154 441
Msa0625440 AT1G78915.3 58.250 400 120 6 31 402 24 404 2.00e-153 439

Find 101 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTACAGACATTGACTTTC+AGG 0.158053 4_3:-4447917 Msa0625440:CDS
TGGCCATAGCTTCTACTTAA+TGG 0.208110 4_3:+4443604 None:intergenic
TCTACTTAATGGGGAAATAT+TGG 0.211630 4_3:+4443615 None:intergenic
TAGCTATTCTATATGTAATT+AGG 0.225164 4_3:-4443554 Msa0625440:three_prime_UTR
ACTCAGGTTGAATTACTTCT+AGG 0.252470 4_3:-4444463 Msa0625440:intron
GATGAGGAATTTACTTGAAT+TGG 0.261760 4_3:+4445693 None:intergenic
AACGCCTCAACGCTATTAAA+AGG 0.279505 4_3:-4447894 Msa0625440:intron
GGTGTAGCTGTTGCAGTCTT+TGG 0.285392 4_3:-4447652 Msa0625440:CDS
GGCCATAGCTTCTACTTAAT+GGG 0.288978 4_3:+4443605 None:intergenic
ACGAGTGCTTTGGCTTTATC+TGG 0.301827 4_3:+4443777 None:intergenic
ACAAACCTCATCTGGCTTCT+TGG 0.302807 4_3:+4446006 None:intergenic
GCAGAAGAGAATAAACAATT+TGG 0.307313 4_3:-4447757 Msa0625440:CDS
ACAGGCTGTTCAATTACTTT+TGG 0.317877 4_3:-4445793 Msa0625440:intron
CGAAAAGCATCAGCATCATT+TGG 0.321295 4_3:+4446516 None:intergenic
GATTCAAATTCTCGTGGCTT+CGG 0.341328 4_3:-4448273 Msa0625440:CDS
GAAGGATAAAGCTGCTCTTC+AGG 0.342872 4_3:-4447399 Msa0625440:intron
CGAGAGCAGTTGGATCTCTT+GGG 0.359823 4_3:+4447043 None:intergenic
TTTATTATTATTCTTCGAAC+CGG 0.373543 4_3:+4448306 None:intergenic
CTTGGCAGCAAGTAATGAAT+TGG 0.375532 4_3:+4446024 None:intergenic
TTTGCTACCAAGGTTGGAAT+AGG 0.376986 4_3:-4447673 Msa0625440:CDS
CCAGCTTCTGTGAGTCTGTT+GGG 0.378973 4_3:+4445718 None:intergenic
TCGAGAGCAGTTGGATCTCT+TGG 0.385657 4_3:+4447042 None:intergenic
AAATATCCACGAAAATCATC+AGG 0.401839 4_3:+4444370 None:intergenic
GACTCTGAAGAAATAGAAAT+AGG 0.409395 4_3:+4447715 None:intergenic
ATATTACGAGACCGGTAGTA+TGG 0.422009 4_3:-4448524 None:intergenic
TATCTTGACATTGATTATGA+TGG 0.426099 4_3:-4443730 Msa0625440:three_prime_UTR
ACCACAGCACTGTCTTGGTT+GGG 0.439621 4_3:+4447440 None:intergenic
TCAAGATGACAAACCTCATC+TGG 0.444561 4_3:+4445998 None:intergenic
ATAACGGTCCACGAGTGCTT+TGG 0.448271 4_3:+4443767 None:intergenic
ATCAAATTTGAAGTTCTTCG+TGG 0.449209 4_3:-4446052 Msa0625440:CDS
CTAGGAGACTGTTTGGTGGA+TGG 0.451140 4_3:+4448051 None:intergenic
TCCAGCTTCTGTGAGTCTGT+TGG 0.453375 4_3:+4445717 None:intergenic
CCCAACAGACTCACAGAAGC+TGG 0.454601 4_3:-4445718 Msa0625440:CDS
GAGTCAGACAACAAAACAAT+TGG 0.459047 4_3:-4447697 Msa0625440:CDS
ATACTTACTAGGAGACTGTT+TGG 0.459147 4_3:+4448044 None:intergenic
ATTGGCTTTGCTACCAAGGT+TGG 0.459444 4_3:-4447679 Msa0625440:CDS
GACCACAGCACTGTCTTGGT+TGG 0.464901 4_3:+4447439 None:intergenic
AATTCTCGTGGCTTCGGAGG+AGG 0.473229 4_3:-4448267 Msa0625440:CDS
TTGCAACGGTGGTTTGCTCC+CGG 0.476590 4_3:-4448325 Msa0625440:CDS
TCAAGTAGAGAAGCAGCTCT+TGG 0.479567 4_3:+4446911 None:intergenic
AATCTGGCAGAGTAGGCTTA+AGG 0.480849 4_3:-4447091 Msa0625440:intron
CATTGACCACAGCACTGTCT+TGG 0.489183 4_3:+4447435 None:intergenic
TAGGGAAAGCCTATTCAGAC+TGG 0.489372 4_3:-4444444 Msa0625440:CDS
CTCAGGTTGAATTACTTCTA+GGG 0.491519 4_3:-4444462 Msa0625440:intron
TCATTGATTCATTCGTGATG+TGG 0.505265 4_3:-4448386 Msa0625440:exon
ATAGGTGCATCATAGTCAAT+TGG 0.505813 4_3:+4447733 None:intergenic
TATGAACTCAAAGATTATGA+AGG 0.509948 4_3:-4446474 Msa0625440:CDS
AACAATTGGCTTTGCTACCA+AGG 0.510682 4_3:-4447683 Msa0625440:CDS
CTACTTACTTCGAGAGCAGT+TGG 0.510701 4_3:+4447033 None:intergenic
TCACGAATGAATCAATGATA+AGG 0.510751 4_3:+4448391 None:intergenic
CTTTCTGTGAATCTGCAGTA+AGG 0.512475 4_3:+4443645 None:intergenic
TCCCCATTAAGTAGAAGCTA+TGG 0.525348 4_3:-4443607 Msa0625440:three_prime_UTR
GACGTGGCCCCAGTCTGAAT+AGG 0.528789 4_3:+4444435 None:intergenic
TGAACTCAGACGCTCACGGC+AGG 0.532174 4_3:+4445770 None:intergenic
GTCAGCACTTGAGCAAAAGA+AGG 0.534318 4_3:-4447779 Msa0625440:CDS
TAAGCTATTATCTTGAATAA+CGG 0.535544 4_3:+4443751 None:intergenic
TGTGAGGTTAAAAGCGGTGC+CGG 0.542657 4_3:+4447946 None:intergenic
ATGTATACCTACCTTCCTGA+TGG 0.543835 4_3:+4447601 None:intergenic
AGCTACACCTATTCCAACCT+TGG 0.544276 4_3:+4447666 None:intergenic
GCAGTAACTTTCGCAGAACT+AGG 0.548651 4_3:-4446941 Msa0625440:CDS
TGCTCGGATTCAAATTCTCG+TGG 0.550601 4_3:-4448279 Msa0625440:CDS
GAATCTGCAGTAAGGAAAAG+AGG 0.553510 4_3:+4443653 None:intergenic
GAGCTGATCGTAAATAGCTA+TGG 0.571334 4_3:+4444405 None:intergenic
TGCAACTGCAATTGCAACGG+TGG 0.574392 4_3:-4448336 Msa0625440:CDS
GAGAGCAGTTGGATCTCTTG+GGG 0.577307 4_3:+4447044 None:intergenic
CAGCAAGTAATGAATTGGTA+AGG 0.579172 4_3:+4446029 None:intergenic
TTATTATTATTCTTCGAACC+GGG 0.579174 4_3:+4448307 None:intergenic
TCTACTTGATGATTTGACAA+AGG 0.581273 4_3:-4446897 Msa0625440:intron
ATGAACTCAAAGATTATGAA+GGG 0.581446 4_3:-4446473 Msa0625440:CDS
AGGGAAAGCCTATTCAGACT+GGG 0.584128 4_3:-4444443 Msa0625440:CDS
CTTACTAGGAGACTGTTTGG+TGG 0.586512 4_3:+4448047 None:intergenic
TGCATATAAAAGTTCAGCAA+AGG 0.587863 4_3:-4446442 Msa0625440:intron
GCCATAGCTTCTACTTAATG+GGG 0.589953 4_3:+4443606 None:intergenic
TACGAGACCGGTAGTATGGA+TGG 0.590133 4_3:-4448520 Msa0625440:five_prime_UTR
TCACTACTACATTAAACAGA+AGG 0.592643 4_3:-4448425 Msa0625440:five_prime_UTR
GATGGTATAAGCGGGAGGAG+AGG 0.596546 4_3:-4448502 Msa0625440:five_prime_UTR
CAATGATAAATTGTCAGAGA+AGG 0.596868 4_3:-4447417 Msa0625440:CDS
AACTGCAACTGCAATTGCAA+CGG 0.596961 4_3:-4448339 Msa0625440:CDS
TCAAATTCTCGTGGCTTCGG+AGG 0.598502 4_3:-4448270 Msa0625440:CDS
GCTTATACCATCCATACTAC+CGG 0.598795 4_3:+4448513 None:intergenic
AGATAAAGCCAAAGCACTCG+TGG 0.601002 4_3:-4443775 Msa0625440:CDS
ATGTGTCCATATTACGAGAC+CGG 0.605355 4_3:-4448532 None:intergenic
GTAGTATGGATGGTATAAGC+GGG 0.607944 4_3:-4448510 Msa0625440:five_prime_UTR
TACTACATTAAACAGAAGGA+AGG 0.616468 4_3:-4448421 Msa0625440:five_prime_UTR
TGCTGCCAAGAAGCCAGATG+AGG 0.617724 4_3:-4446011 Msa0625440:intron
ACATTAAACAGAAGGAAGGA+AGG 0.620796 4_3:-4448417 Msa0625440:five_prime_UTR
TGTATACCTACCTTCCTGAT+GGG 0.622172 4_3:+4447602 None:intergenic
GTTGCAGTTGATGCTTCCGA+TGG 0.624179 4_3:+4448353 None:intergenic
GGTAGTATGGATGGTATAAG+CGG 0.635190 4_3:-4448511 Msa0625440:five_prime_UTR
ATGTGGACTGCAATGTCCAT+CGG 0.648596 4_3:-4448369 Msa0625440:CDS
AATATCCACGAAAATCATCA+GGG 0.664165 4_3:+4444371 None:intergenic
GTATGGATGGTATAAGCGGG+AGG 0.674497 4_3:-4448507 Msa0625440:five_prime_UTR
CTTCTGAACTCAGACGCTCA+CGG 0.675199 4_3:+4445766 None:intergenic
TCAACCTGTGAGGTTAAAAG+CGG 0.675885 4_3:+4447940 None:intergenic
GGGAAAGCCTATTCAGACTG+GGG 0.676546 4_3:-4444442 Msa0625440:CDS
GTCTGTAGCATCAACCTGTG+AGG 0.684258 4_3:+4447930 None:intergenic
TATTCAGACTGGGGCCACGT+CGG 0.685550 4_3:-4444433 Msa0625440:CDS
AATGTAGTAGTGACATGACA+TGG 0.686230 4_3:+4448435 None:intergenic
AAAACATTGGAGATGCTGAG+AGG 0.689706 4_3:-4443976 Msa0625440:CDS
TCCCAACCAAGACAGTGCTG+TGG 0.696430 4_3:-4447441 Msa0625440:CDS
TAGCTATGGCATCACCGACG+TGG 0.718295 4_3:+4444419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAAAAAATTGCT+CGG - chr4_3:4443723-4443742 Msa0625440:three_prime_UTR 10.0%
!! ATTAATTAATTATTCTTTCT+AGG - chr4_3:4444217-4444236 Msa0625440:intron 10.0%
!!! TCATTTCTTTTATTTATTTT+TGG - chr4_3:4446569-4446588 Msa0625440:intron 10.0%
!!! AACTATATACTTATTTTAAT+TGG + chr4_3:4448501-4448520 None:intergenic 10.0%
!! GTAATTTACTACTAATAATT+TGG - chr4_3:4445232-4445251 Msa0625440:intron 15.0%
!!! TTTTGAAAGAAAATTTTAGT+CGG + chr4_3:4445412-4445431 None:intergenic 15.0%
!! TAATGTTATCCATAAATATT+TGG - chr4_3:4445918-4445937 Msa0625440:intron 15.0%
!! ATATTTAATCTAAATACAGT+GGG - chr4_3:4446156-4446175 Msa0625440:intron 15.0%
!!! TTTGTGAAAAAAATATTTTC+AGG + chr4_3:4446458-4446477 None:intergenic 15.0%
!!! TTCTTTTATTTATTTTTGGT+TGG - chr4_3:4446573-4446592 Msa0625440:intron 15.0%
!!! TCTTTTATTTATTTTTGGTT+GGG - chr4_3:4446574-4446593 Msa0625440:intron 15.0%
!!! TTATTTTTTGCAATTTTTAC+TGG + chr4_3:4447324-4447343 None:intergenic 15.0%
!!! TACATAAACTTAATTTTCTT+AGG - chr4_3:4447452-4447471 Msa0625440:intron 15.0%
!! ATCTCTAAACTAAAAAACTT+TGG + chr4_3:4443550-4443569 None:intergenic 20.0%
!! TTTATTATTATTCTTCGAAC+CGG + chr4_3:4443715-4443734 None:intergenic 20.0%
!! TATTTATTTATTTGTAGAGC+CGG - chr4_3:4444053-4444072 Msa0625440:intron 20.0%
!!! AGTGTAATGCTTAAATTTTA+AGG + chr4_3:4444866-4444885 None:intergenic 20.0%
!! AATATATATTTCCTGAAATC+TGG - chr4_3:4444911-4444930 Msa0625440:intron 20.0%
!!! GATGCTTTTCAATAAATAAT+AGG + chr4_3:4445178-4445197 None:intergenic 20.0%
!! CATATTTAATCTAAATACAG+TGG - chr4_3:4446155-4446174 Msa0625440:intron 20.0%
!!! AGATATTATTCTCTTTTGTA+AGG - chr4_3:4446364-4446383 Msa0625440:intron 20.0%
!! TACGTTTATTGATAAAATAC+TGG + chr4_3:4446601-4446620 None:intergenic 20.0%
!!! TGAGATTTTACAGAAAAAAT+AGG + chr4_3:4446936-4446955 None:intergenic 20.0%
!!! TTAGAGATATTTTAAAGTGA+TGG + chr4_3:4446981-4447000 None:intergenic 20.0%
!!! GATTTAGTGTGTATTTTATA+AGG + chr4_3:4447005-4447024 None:intergenic 20.0%
!! TTCACTAATGTATAAAGATA+AGG + chr4_3:4447356-4447375 None:intergenic 20.0%
!! TTTATATTATTGTGATACTC+AGG - chr4_3:4447539-4447558 Msa0625440:intron 20.0%
!!! GTTGATATTCTAAAACATTA+TGG - chr4_3:4447954-4447973 Msa0625440:intron 20.0%
!!! CAATGTTTTTGTTTTCTTTT+AGG + chr4_3:4448031-4448050 None:intergenic 20.0%
!! CTAAAAGAAAACAAAAACAT+TGG - chr4_3:4448029-4448048 Msa0625440:intron 20.0%
!! TAAGCTATTATCTTGAATAA+CGG + chr4_3:4448270-4448289 None:intergenic 20.0%
!!! TTTTGTAATACTCTATCTAA+TGG + chr4_3:4448437-4448456 None:intergenic 20.0%
!! TAGCTATTCTATATGTAATT+AGG - chr4_3:4448464-4448483 Msa0625440:five_prime_UTR 20.0%
! TTATTATTATTCTTCGAACC+GGG + chr4_3:4443714-4443733 None:intergenic 25.0%
! AATTGAATTGCTTCTTTATC+AGG - chr4_3:4443941-4443960 Msa0625440:intron 25.0%
! TAGATAGATAGATACTTACT+AGG + chr4_3:4443988-4444007 None:intergenic 25.0%
!!! TGCTCTTTAATTTTTGTGTA+TGG - chr4_3:4444525-4444544 Msa0625440:intron 25.0%
! AACATTTATTTCACAAGGAA+AGG + chr4_3:4444731-4444750 None:intergenic 25.0%
!! TATCAATGATTCTGTAGTTT+TGG + chr4_3:4444892-4444911 None:intergenic 25.0%
! TGTCTCTAGATATATTTGAA+AGG - chr4_3:4445040-4445059 Msa0625440:intron 25.0%
! GTCTCTAGATATATTTGAAA+GGG - chr4_3:4445041-4445060 Msa0625440:intron 25.0%
!! ATATATTTGAAAGGGTTTTC+AGG - chr4_3:4445049-4445068 Msa0625440:intron 25.0%
!! TATATTTGAAAGGGTTTTCA+GGG - chr4_3:4445050-4445069 Msa0625440:intron 25.0%
! TGACAAAGGTTAGTATTATA+TGG - chr4_3:4445135-4445154 Msa0625440:intron 25.0%
! ACATTACAATCTCTAATTAC+AGG + chr4_3:4445344-4445363 None:intergenic 25.0%
! GTTATACATTTAATCTTCTC+AGG - chr4_3:4445370-4445389 Msa0625440:intron 25.0%
! TATGAACTCAAAGATTATGA+AGG - chr4_3:4445544-4445563 Msa0625440:intron 25.0%
! ATGAACTCAAAGATTATGAA+GGG - chr4_3:4445545-4445564 Msa0625440:intron 25.0%
! AAACAACTCTCAAAACTAAA+TGG - chr4_3:4445645-4445664 Msa0625440:intron 25.0%
! TTCATTCTGCAATTAAGATT+GGG - chr4_3:4445705-4445724 Msa0625440:intron 25.0%
! TCTTAGTGATTAATTGCTTT+AGG - chr4_3:4445880-4445899 Msa0625440:intron 25.0%
! TAGGATCAACCAAATATTTA+TGG + chr4_3:4445930-4445949 None:intergenic 25.0%
! TATTCAATTCTTTCTTCAAC+AGG - chr4_3:4446207-4446226 Msa0625440:intron 25.0%
! TATCAATAAACGTATCAGTT+AGG - chr4_3:4446607-4446626 Msa0625440:intron 25.0%
! AAATTCGATAAAATAACAGC+AGG + chr4_3:4446652-4446671 None:intergenic 25.0%
!!! TTTCATTATTGCTGTTTCAT+TGG - chr4_3:4446718-4446737 Msa0625440:intron 25.0%
! GTAAACCTATAAATCTAACA+TGG + chr4_3:4446746-4446765 None:intergenic 25.0%
!!! ACTATCAAGGTTTTAATTTG+CGG - chr4_3:4446777-4446796 Msa0625440:intron 25.0%
! TTAGTATAAATATGATTGCC+AGG + chr4_3:4447297-4447316 None:intergenic 25.0%
!!! TGAATCTTTTGTTTTGCTTT+CGG - chr4_3:4447396-4447415 Msa0625440:intron 25.0%
!! GACAAAATGTTTTCTATGAA+AGG + chr4_3:4447482-4447501 None:intergenic 25.0%
! ACAGTCATCAATCTAAATTT+AGG + chr4_3:4448146-4448165 None:intergenic 25.0%
!! TAAATTTAGATTGATGACTG+TGG - chr4_3:4448145-4448164 Msa0625440:intron 25.0%
!! TATCTTGACATTGATTATGA+TGG - chr4_3:4448288-4448307 Msa0625440:CDS 25.0%
!!! TATTTTAATTGGAAGTTCGT+TGG + chr4_3:4448490-4448509 None:intergenic 25.0%
TCACTACTACATTAAACAGA+AGG - chr4_3:4443593-4443612 Msa0625440:three_prime_UTR 30.0%
TACTACATTAAACAGAAGGA+AGG - chr4_3:4443597-4443616 Msa0625440:three_prime_UTR 30.0%
TCACGAATGAATCAATGATA+AGG + chr4_3:4443630-4443649 None:intergenic 30.0%
GCAGAAGAGAATAAACAATT+TGG - chr4_3:4444261-4444280 Msa0625440:intron 30.0%
! GACTCTGAAGAAATAGAAAT+AGG + chr4_3:4444306-4444325 None:intergenic 30.0%
CATGTAAATGAACATGATGA+GGG + chr4_3:4444507-4444526 None:intergenic 30.0%
! TTTTTGTGTATGGTTGAAAC+TGG - chr4_3:4444535-4444554 Msa0625440:intron 30.0%
CAATGATAAATTGTCAGAGA+AGG - chr4_3:4444601-4444620 Msa0625440:intron 30.0%
ACAAGGAAAGGAAACAAAAT+AGG + chr4_3:4444719-4444738 None:intergenic 30.0%
CAGTGAACATTTATTTCACA+AGG + chr4_3:4444736-4444755 None:intergenic 30.0%
! TCTACTTGATGATTTGACAA+AGG - chr4_3:4445121-4445140 Msa0625440:intron 30.0%
!! ATTGAAAAGCATCTTCATTC+AGG - chr4_3:4445185-4445204 Msa0625440:intron 30.0%
!! TTGAAAAGCATCTTCATTCA+GGG - chr4_3:4445186-4445205 Msa0625440:intron 30.0%
! AGGGGATTTATTTCTTATGT+AGG - chr4_3:4445205-4445224 Msa0625440:intron 30.0%
TACAGGAAACTAAAAATGCA+GGG + chr4_3:4445327-4445346 None:intergenic 30.0%
TTACAGGAAACTAAAAATGC+AGG + chr4_3:4445328-4445347 None:intergenic 30.0%
TGCATATAAAAGTTCAGCAA+AGG - chr4_3:4445576-4445595 Msa0625440:intron 30.0%
!!! ACGACTTCAAACACTTTTTT+TGG - chr4_3:4445611-4445630 Msa0625440:intron 30.0%
!!! CGACTTCAAACACTTTTTTT+GGG - chr4_3:4445612-4445631 Msa0625440:intron 30.0%
GTTCATTCTGCAATTAAGAT+TGG - chr4_3:4445704-4445723 Msa0625440:intron 30.0%
! AACCAGAGTTTAAAACTGTA+GGG - chr4_3:4445831-4445850 Msa0625440:intron 30.0%
AATATTTGGTTGATCCTAAC+AGG - chr4_3:4445932-4445951 Msa0625440:intron 30.0%
! ATCAAATTTGAAGTTCTTCG+TGG - chr4_3:4445966-4445985 Msa0625440:intron 30.0%
CTTCATATGAATGTGCTATA+CGG - chr4_3:4446052-4446071 Msa0625440:CDS 30.0%
ACTAAGATAAGAAACCAGAA+TGG + chr4_3:4446078-4446097 None:intergenic 30.0%
AATCATCAGATTTCGCTATA+CGG - chr4_3:4446112-4446131 Msa0625440:intron 30.0%
GATGAGGAATTTACTTGAAT+TGG + chr4_3:4446328-4446347 None:intergenic 30.0%
TGTTCACTTTCTAAATGATG+AGG + chr4_3:4446344-4446363 None:intergenic 30.0%
CAGGATACTTTCAATATGTT+GGG - chr4_3:4446530-4446549 Msa0625440:intron 30.0%
AGCAATAATGAAAACACAAG+GGG + chr4_3:4446711-4446730 None:intergenic 30.0%
CAGCAATAATGAAAACACAA+GGG + chr4_3:4446712-4446731 None:intergenic 30.0%
ACAGCAATAATGAAAACACA+AGG + chr4_3:4446713-4446732 None:intergenic 30.0%
TGGTACCATGTTAGATTTAT+AGG - chr4_3:4446738-4446757 Msa0625440:intron 30.0%
ATTTATAGGTTTACCGAAGA+AGG - chr4_3:4446752-4446771 Msa0625440:intron 30.0%
ATGGATACTTATTGTTTCCA+GGG + chr4_3:4447229-4447248 None:intergenic 30.0%
TATGGATACTTATTGTTTCC+AGG + chr4_3:4447230-4447249 None:intergenic 30.0%
CATAAAGGAGTAGTAGTTTA+TGG + chr4_3:4447248-4447267 None:intergenic 30.0%
AACTACTACTCCTTTATGAT+CGG - chr4_3:4447250-4447269 Msa0625440:intron 30.0%
ATGTAACAATATAGACAACC+TGG - chr4_3:4447276-4447295 Msa0625440:intron 30.0%
!!! GAATCTTTTGTTTTGCTTTC+GGG - chr4_3:4447397-4447416 Msa0625440:intron 30.0%
!!! AATCTTTTGTTTTGCTTTCG+GGG - chr4_3:4447398-4447417 Msa0625440:intron 30.0%
AATATCCACGAAAATCATCA+GGG + chr4_3:4447650-4447669 None:intergenic 30.0%
AAATATCCACGAAAATCATC+AGG + chr4_3:4447651-4447670 None:intergenic 30.0%
ATGAGAGAAAATATAGACCT+TGG + chr4_3:4447676-4447695 None:intergenic 30.0%
TCTCATTTAATCACTAACCA+TGG - chr4_3:4447690-4447709 Msa0625440:CDS 30.0%
GAAAAGAAATGATAACTCCA+TGG + chr4_3:4447710-4447729 None:intergenic 30.0%
TGCGAATCAAATTGAAGAAA+AGG - chr4_3:4447732-4447751 Msa0625440:CDS 30.0%
!! TTAGTGTTATTTACAGTCCA+TGG + chr4_3:4447889-4447908 None:intergenic 30.0%
ACACTAATTTCACAAAATCG+AGG - chr4_3:4447902-4447921 Msa0625440:CDS 30.0%
TCTACTTAATGGGGAAATAT+TGG + chr4_3:4448406-4448425 None:intergenic 30.0%
AATGTAGTAGTGACATGACA+TGG + chr4_3:4443586-4443605 None:intergenic 35.0%
ACATTAAACAGAAGGAAGGA+AGG - chr4_3:4443601-4443620 Msa0625440:three_prime_UTR 35.0%
!! TCATTGATTCATTCGTGATG+TGG - chr4_3:4443632-4443651 Msa0625440:three_prime_UTR 35.0%
ATACTTACTAGGAGACTGTT+TGG + chr4_3:4443977-4443996 None:intergenic 35.0%
! CAAACCTTTTAATAGCGTTG+AGG + chr4_3:4444131-4444150 None:intergenic 35.0%
ATAGGTGCATCATAGTCAAT+TGG + chr4_3:4444288-4444307 None:intergenic 35.0%
GAGTCAGACAACAAAACAAT+TGG - chr4_3:4444321-4444340 Msa0625440:intron 35.0%
GCATGTAAATGAACATGATG+AGG + chr4_3:4444508-4444527 None:intergenic 35.0%
!! TGAAAAGCATCTTCATTCAG+GGG - chr4_3:4445187-4445206 Msa0625440:intron 35.0%
!! ATTTTAGTCGGAATTGCATG+AGG + chr4_3:4445400-4445419 None:intergenic 35.0%
!! AGCACTCGTGTTTTTAATCA+TGG - chr4_3:4445438-4445457 Msa0625440:intron 35.0%
!!! CTGATTTTTTTCGTGTTCCA+AGG - chr4_3:4445474-4445493 Msa0625440:intron 35.0%
!!! AGCATCATTTGGTTTTTCCT+TGG + chr4_3:4445494-4445513 None:intergenic 35.0%
!!! CTTCAAACACTTTTTTTGGG+TGG - chr4_3:4445615-4445634 Msa0625440:intron 35.0%
ATTCTGCAATTAAGATTGGG+TGG - chr4_3:4445708-4445727 Msa0625440:CDS 35.0%
GTACTCATTTACAGAATAGC+TGG + chr4_3:4445802-4445821 None:intergenic 35.0%
! GAACCAGAGTTTAAAACTGT+AGG - chr4_3:4445830-4445849 Msa0625440:intron 35.0%
GATATCTTCAGATACCTGTT+AGG + chr4_3:4445949-4445968 None:intergenic 35.0%
CAGCAAGTAATGAATTGGTA+AGG + chr4_3:4445992-4446011 None:intergenic 35.0%
! ACAGGCTGTTCAATTACTTT+TGG - chr4_3:4446225-4446244 Msa0625440:intron 35.0%
!! CTTTTGTAAGGTCTTGCTAT+AGG - chr4_3:4446376-4446395 Msa0625440:intron 35.0%
!! CCATGTTTAAGTTTTGGTCA+TGG + chr4_3:4446510-4446529 None:intergenic 35.0%
CCATGACCAAAACTTAAACA+TGG - chr4_3:4446507-4446526 Msa0625440:CDS 35.0%
!! ATCCTGCCATGTTTAAGTTT+TGG + chr4_3:4446516-4446535 None:intergenic 35.0%
GCAGGATACTTTCAATATGT+TGG - chr4_3:4446529-4446548 Msa0625440:intron 35.0%
CAATAATGAAAACACAAGGG+GGG + chr4_3:4446709-4446728 None:intergenic 35.0%
GCAATAATGAAAACACAAGG+GGG + chr4_3:4446710-4446729 None:intergenic 35.0%
! ACCTTGATAGTTTCCTTCTT+CGG + chr4_3:4446768-4446787 None:intergenic 35.0%
GTTACATCAACCGATCATAA+AGG + chr4_3:4447263-4447282 None:intergenic 35.0%
!! ACTCAGGTTGAATTACTTCT+AGG - chr4_3:4447555-4447574 Msa0625440:intron 35.0%
!! CTCAGGTTGAATTACTTCTA+GGG - chr4_3:4447556-4447575 Msa0625440:intron 35.0%
! TTTTCGTGGATATTTAGCCA+AGG - chr4_3:4447656-4447675 Msa0625440:CDS 35.0%
! TGTCGTTCCTTTTCATTTTG+TGG - chr4_3:4447828-4447847 Msa0625440:intron 35.0%
! GTTCCTTTTCATTTTGTGGT+TGG - chr4_3:4447832-4447851 Msa0625440:intron 35.0%
ACACCAACCACAAAATGAAA+AGG + chr4_3:4447838-4447857 None:intergenic 35.0%
GCTTATACCATCCATACTAC+CGG + chr4_3:4443508-4443527 None:intergenic 40.0%
GGTAGTATGGATGGTATAAG+CGG - chr4_3:4443507-4443526 Msa0625440:three_prime_UTR 40.0%
GTAGTATGGATGGTATAAGC+GGG - chr4_3:4443508-4443527 Msa0625440:three_prime_UTR 40.0%
AACTGCAACTGCAATTGCAA+CGG - chr4_3:4443679-4443698 Msa0625440:three_prime_UTR 40.0%
GATTCAAATTCTCGTGGCTT+CGG - chr4_3:4443745-4443764 Msa0625440:exon 40.0%
TCAACCTGTGAGGTTAAAAG+CGG + chr4_3:4444081-4444100 None:intergenic 40.0%
!! TGCTACAGACATTGACTTTC+AGG - chr4_3:4444101-4444120 Msa0625440:intron 40.0%
AACGCCTCAACGCTATTAAA+AGG - chr4_3:4444124-4444143 Msa0625440:intron 40.0%
!! AACAATTGGCTTTGCTACCA+AGG - chr4_3:4444335-4444354 Msa0625440:intron 40.0%
TTTGCTACCAAGGTTGGAAT+AGG - chr4_3:4444345-4444364 Msa0625440:intron 40.0%
!! TTTGGTCTCGTTTTTGCTCT+TGG - chr4_3:4444384-4444403 Msa0625440:CDS 40.0%
TGTATACCTACCTTCCTGAT+GGG + chr4_3:4444419-4444438 None:intergenic 40.0%
ATGTATACCTACCTTCCTGA+TGG + chr4_3:4444420-4444439 None:intergenic 40.0%
TGTCTTGGTTGGGACTAAAA+AGG + chr4_3:4444571-4444590 None:intergenic 40.0%
ACTAGTGAATCCAGAGTTCA+GGG - chr4_3:4444779-4444798 Msa0625440:intron 40.0%
!! CGAAAAGCATCAGCATCATT+TGG + chr4_3:4445505-4445524 None:intergenic 40.0%
TGCAGAATGAACTGAGTTCT+TGG + chr4_3:4445696-4445715 None:intergenic 40.0%
! AGAATAGCTGGTCTAAAAGC+TGG + chr4_3:4445790-4445809 None:intergenic 40.0%
!!! TGCCCTACAGTTTTAAACTC+TGG + chr4_3:4445836-4445855 None:intergenic 40.0%
CTTGGCAGCAAGTAATGAAT+TGG + chr4_3:4445997-4446016 None:intergenic 40.0%
TCAAGATGACAAACCTCATC+TGG + chr4_3:4446023-4446042 None:intergenic 40.0%
TCTAAATACAGTGGGTCTAG+TGG - chr4_3:4446164-4446183 Msa0625440:intron 40.0%
!! TGGTCATGGTGCTGATATAA+AGG + chr4_3:4446496-4446515 None:intergenic 40.0%
GACCAAAACTTAAACATGGC+AGG - chr4_3:4446511-4446530 Msa0625440:CDS 40.0%
ACCGAAGAAGGAAACTATCA+AGG - chr4_3:4446764-4446783 Msa0625440:intron 40.0%
! ATCTGTTGTGATGCGCATTT+TGG - chr4_3:4446840-4446859 Msa0625440:intron 40.0%
GATCACTACATAGTCAGTTG+CGG - chr4_3:4447065-4447084 Msa0625440:CDS 40.0%
ACCATAATTGCAGCATGATG+CGG - chr4_3:4447139-4447158 Msa0625440:intron 40.0%
TTGTTGCAACCGCAATATTG+TGG - chr4_3:4447171-4447190 Msa0625440:intron 40.0%
GTTTCCAGGGTTTCAAATTG+CGG + chr4_3:4447216-4447235 None:intergenic 40.0%
GAGCTGATCGTAAATAGCTA+TGG + chr4_3:4447616-4447635 None:intergenic 40.0%
AAAACATTGGAGATGCTGAG+AGG - chr4_3:4448042-4448061 Msa0625440:intron 40.0%
! CAGTTGTAACCTTTTTCTGC+AGG - chr4_3:4448204-4448223 Msa0625440:CDS 40.0%
GAATCTGCAGTAAGGAAAAG+AGG + chr4_3:4448368-4448387 None:intergenic 40.0%
CTTTCTGTGAATCTGCAGTA+AGG + chr4_3:4448376-4448395 None:intergenic 40.0%
TCCCCATTAAGTAGAAGCTA+TGG - chr4_3:4448411-4448430 Msa0625440:five_prime_UTR 40.0%
GCCATAGCTTCTACTTAATG+GGG + chr4_3:4448415-4448434 None:intergenic 40.0%
GGCCATAGCTTCTACTTAAT+GGG + chr4_3:4448416-4448435 None:intergenic 40.0%
TGGCCATAGCTTCTACTTAA+TGG + chr4_3:4448417-4448436 None:intergenic 40.0%
! ATGTGGACTGCAATGTCCAT+CGG - chr4_3:4443649-4443668 Msa0625440:three_prime_UTR 45.0%
TGCTCGGATTCAAATTCTCG+TGG - chr4_3:4443739-4443758 Msa0625440:exon 45.0%
CTTACTAGGAGACTGTTTGG+TGG + chr4_3:4443974-4443993 None:intergenic 45.0%
GTCAGCACTTGAGCAAAAGA+AGG - chr4_3:4444239-4444258 Msa0625440:intron 45.0%
!! ATTGGCTTTGCTACCAAGGT+TGG - chr4_3:4444339-4444358 Msa0625440:intron 45.0%
AGCTACACCTATTCCAACCT+TGG + chr4_3:4444355-4444374 None:intergenic 45.0%
! CTTGGAGATTTTCTCCCATC+AGG - chr4_3:4444402-4444421 Msa0625440:CDS 45.0%
! GAGATTTTCTCCCATCAGGA+AGG - chr4_3:4444406-4444425 Msa0625440:CDS 45.0%
! TTTTCTCCCATCAGGAAGGT+AGG - chr4_3:4444410-4444429 Msa0625440:CDS 45.0%
GAAGGATAAAGCTGCTCTTC+AGG - chr4_3:4444619-4444638 Msa0625440:intron 45.0%
CAGAAGGGGGAAAAATAAGG+TGG + chr4_3:4444653-4444672 None:intergenic 45.0%
!!! CACCTTATTTTTCCCCCTTC+TGG - chr4_3:4444651-4444670 Msa0625440:intron 45.0%
TGCCAGAAGGGGGAAAAATA+AGG + chr4_3:4444656-4444675 None:intergenic 45.0%
AACTGACTGATTGCCAGAAG+GGG + chr4_3:4444667-4444686 None:intergenic 45.0%
GAACTGACTGATTGCCAGAA+GGG + chr4_3:4444668-4444687 None:intergenic 45.0%
TGAACTGACTGATTGCCAGA+AGG + chr4_3:4444669-4444688 None:intergenic 45.0%
TTCTGGCAATCAGTCAGTTC+AGG - chr4_3:4444668-4444687 Msa0625440:intron 45.0%
GACTAGTGAATCCAGAGTTC+AGG - chr4_3:4444778-4444797 Msa0625440:intron 45.0%
ATCCAGAGTTCAGGGTTTAC+TGG - chr4_3:4444787-4444806 Msa0625440:intron 45.0%
TTCCTGAAATCTGGCAGAGT+AGG - chr4_3:4444920-4444939 Msa0625440:intron 45.0%
AATCTGGCAGAGTAGGCTTA+AGG - chr4_3:4444927-4444946 Msa0625440:intron 45.0%
CTACTTACTTCGAGAGCAGT+TGG + chr4_3:4444988-4445007 None:intergenic 45.0%
ACTGCTCTCGAAGTAAGTAG+TGG - chr4_3:4444988-4445007 Msa0625440:intron 45.0%
GCAGTAACTTTCGCAGAACT+AGG - chr4_3:4445077-4445096 Msa0625440:intron 45.0%
TCAAGTAGAGAAGCAGCTCT+TGG + chr4_3:4445110-4445129 None:intergenic 45.0%
! GCTGATGCTTTTCGTTTGCT+TGG - chr4_3:4445511-4445530 Msa0625440:intron 45.0%
AAACTGTAGGGCACATCAAG+AGG - chr4_3:4445843-4445862 Msa0625440:intron 45.0%
! ACAAACCTCATCTGGCTTCT+TGG + chr4_3:4446015-4446034 None:intergenic 45.0%
AATGTGCTATACGGCCATTC+TGG - chr4_3:4446061-4446080 Msa0625440:CDS 45.0%
ATTTCGCTATACGGCCATTC+TGG - chr4_3:4446121-4446140 Msa0625440:intron 45.0%
!! ATGAGCGTTGAGAACCAGAA+TGG + chr4_3:4446138-4446157 None:intergenic 45.0%
!! TTAATTTGCGGTCGCTGATG+CGG - chr4_3:4446789-4446808 Msa0625440:intron 45.0%
!!! GATGCGCATTTTGGTTGTTG+CGG - chr4_3:4446849-4446868 Msa0625440:intron 45.0%
AGTGAAAACCGCAACGTAGT+GGG + chr4_3:4447104-4447123 None:intergenic 45.0%
ACCGCATCATGCTGCAATTA+TGG + chr4_3:4447143-4447162 None:intergenic 45.0%
GTGATGTGGCCACAATATTG+CGG + chr4_3:4447183-4447202 None:intergenic 45.0%
! TGATCCGCAATTTGAAACCC+TGG - chr4_3:4447209-4447228 Msa0625440:intron 45.0%
TAGGGAAAGCCTATTCAGAC+TGG - chr4_3:4447574-4447593 Msa0625440:intron 45.0%
AGGGAAAGCCTATTCAGACT+GGG - chr4_3:4447575-4447594 Msa0625440:intron 45.0%
! ACTCACCCTGATGATTTTCG+TGG - chr4_3:4447642-4447661 Msa0625440:CDS 45.0%
CATTCCTTTCGCTTTGACCA+TGG - chr4_3:4447869-4447888 Msa0625440:intron 45.0%
CTTGCGCGACTGAGAATATA+TGG - chr4_3:4448095-4448114 Msa0625440:intron 45.0%
! GTAACCTTTTTCTGCAGGCT+AGG - chr4_3:4448209-4448228 Msa0625440:CDS 45.0%
AGAACCTAGCCTGCAGAAAA+AGG + chr4_3:4448216-4448235 None:intergenic 45.0%
!! ACGAGTGCTTTGGCTTTATC+TGG + chr4_3:4448244-4448263 None:intergenic 45.0%
! AGATAAAGCCAAAGCACTCG+TGG - chr4_3:4448243-4448262 Msa0625440:CDS 45.0%
!! ATATAGATTAATTAATTAAT+TGG - chr4_3:4444180-4444199 Msa0625440:intron 5.0%
GTATGGATGGTATAAGCGGG+AGG - chr4_3:4443511-4443530 Msa0625440:three_prime_UTR 50.0%
! GTTGCAGTTGATGCTTCCGA+TGG + chr4_3:4443668-4443687 None:intergenic 50.0%
TGCAACTGCAATTGCAACGG+TGG - chr4_3:4443682-4443701 Msa0625440:three_prime_UTR 50.0%
TCAAATTCTCGTGGCTTCGG+AGG - chr4_3:4443748-4443767 Msa0625440:exon 50.0%
! CTAGGAGACTGTTTGGTGGA+TGG + chr4_3:4443970-4443989 None:intergenic 50.0%
TGTGAGGTTAAAAGCGGTGC+CGG + chr4_3:4444075-4444094 None:intergenic 50.0%
GTCTGTAGCATCAACCTGTG+AGG + chr4_3:4444091-4444110 None:intergenic 50.0%
GGTGTAGCTGTTGCAGTCTT+TGG - chr4_3:4444366-4444385 Msa0625440:CDS 50.0%
ACCACAGCACTGTCTTGGTT+GGG + chr4_3:4444581-4444600 None:intergenic 50.0%
CATTGACCACAGCACTGTCT+TGG + chr4_3:4444586-4444605 None:intergenic 50.0%
ACTGACTGATTGCCAGAAGG+GGG + chr4_3:4444666-4444685 None:intergenic 50.0%
GACCAGTAAACCCTGAACTC+TGG + chr4_3:4444792-4444811 None:intergenic 50.0%
AGCCTACTCTGCCAGATTTC+AGG + chr4_3:4444925-4444944 None:intergenic 50.0%
GAGAGCAGTTGGATCTCTTG+GGG + chr4_3:4444977-4444996 None:intergenic 50.0%
CGAGAGCAGTTGGATCTCTT+GGG + chr4_3:4444978-4444997 None:intergenic 50.0%
TCGAGAGCAGTTGGATCTCT+TGG + chr4_3:4444979-4444998 None:intergenic 50.0%
TAGGGCACATCAAGAGGCTA+TGG - chr4_3:4445849-4445868 Msa0625440:intron 50.0%
CTTCTGAACTCAGACGCTCA+CGG + chr4_3:4446255-4446274 None:intergenic 50.0%
CCAGCTTCTGTGAGTCTGTT+GGG + chr4_3:4446303-4446322 None:intergenic 50.0%
TCCAGCTTCTGTGAGTCTGT+TGG + chr4_3:4446304-4446323 None:intergenic 50.0%
GGTTGTGACCACTACGATTG+CGG - chr4_3:4446810-4446829 Msa0625440:intron 50.0%
GTTGTGACCACTACGATTGC+GGG - chr4_3:4446811-4446830 Msa0625440:intron 50.0%
TTGTGACCACTACGATTGCG+GGG - chr4_3:4446812-4446831 Msa0625440:intron 50.0%
CAGTGAAAACCGCAACGTAG+TGG + chr4_3:4447105-4447124 None:intergenic 50.0%
ATTGCAGCATGATGCGGTTG+TGG - chr4_3:4447145-4447164 Msa0625440:intron 50.0%
GGGAAAGCCTATTCAGACTG+GGG - chr4_3:4447576-4447595 Msa0625440:intron 50.0%
CAGTCCATGGTCAAAGCGAA+AGG + chr4_3:4447876-4447895 None:intergenic 50.0%
ATAACGGTCCACGAGTGCTT+TGG + chr4_3:4448254-4448273 None:intergenic 50.0%
GATGGTATAAGCGGGAGGAG+AGG - chr4_3:4443516-4443535 Msa0625440:three_prime_UTR 55.0%
!! TTGCAACGGTGGTTTGCTCC+CGG - chr4_3:4443693-4443712 Msa0625440:three_prime_UTR 55.0%
AATTCTCGTGGCTTCGGAGG+AGG - chr4_3:4443751-4443770 Msa0625440:exon 55.0%
!! GGCACCGCTTTTAACCTCAC+AGG - chr4_3:4444074-4444093 Msa0625440:intron 55.0%
TCCCAACCAAGACAGTGCTG+TGG - chr4_3:4444577-4444596 Msa0625440:intron 55.0%
GACCACAGCACTGTCTTGGT+TGG + chr4_3:4444582-4444601 None:intergenic 55.0%
TGCTGCCAAGAAGCCAGATG+AGG - chr4_3:4446007-4446026 Msa0625440:intron 55.0%
CCCAACAGACTCACAGAAGC+TGG - chr4_3:4446300-4446319 Msa0625440:intron 55.0%
TGCAATCCCCGCAATCGTAG+TGG + chr4_3:4446821-4446840 None:intergenic 55.0%
!! AACGTAGTGGGTGTAACGGC+TGG + chr4_3:4447092-4447111 None:intergenic 55.0%
!! CCGCAACGTAGTGGGTGTAA+CGG + chr4_3:4447096-4447115 None:intergenic 55.0%
CCGTTACACCCACTACGTTG+CGG - chr4_3:4447093-4447112 Msa0625440:intron 55.0%
GCGGATCACATCACGTGATG+TGG + chr4_3:4447197-4447216 None:intergenic 55.0%
TATTCAGACTGGGGCCACGT+CGG - chr4_3:4447585-4447604 Msa0625440:intron 55.0%
TAGCTATGGCATCACCGACG+TGG + chr4_3:4447602-4447621 None:intergenic 55.0%
AAGCAGCAGCAGCAGCAGCA+AGG - chr4_3:4443832-4443851 Msa0625440:intron 60.0%
AGCAGCAGCAGCAGCAGCAA+GGG - chr4_3:4443833-4443852 Msa0625440:intron 60.0%
TGAACTCAGACGCTCACGGC+AGG + chr4_3:4446251-4446270 None:intergenic 60.0%
GACGTGGCCCCAGTCTGAAT+AGG + chr4_3:4447586-4447605 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 4443500 4448540 4443500 ID=Msa0625440;Name=Msa0625440
chr4_3 mRNA 4443500 4448540 4443500 ID=Msa0625440-mRNA-1;Parent=Msa0625440;Name=Msa0625440-mRNA-1;_AED=0.10;_eAED=0.10;_QI=149|1|1|1|1|1|13|258|402
chr4_3 exon 4443500 4443814 4443500 ID=Msa0625440-mRNA-1:exon:1189;Parent=Msa0625440-mRNA-1
chr4_3 exon 4443964 4444020 4443964 ID=Msa0625440-mRNA-1:exon:1188;Parent=Msa0625440-mRNA-1
chr4_3 exon 4444363 4444479 4444363 ID=Msa0625440-mRNA-1:exon:1187;Parent=Msa0625440-mRNA-1
chr4_3 exon 4445707 4445811 4445707 ID=Msa0625440-mRNA-1:exon:1186;Parent=Msa0625440-mRNA-1
chr4_3 exon 4446012 4446086 4446012 ID=Msa0625440-mRNA-1:exon:1185;Parent=Msa0625440-mRNA-1
chr4_3 exon 4446443 4446544 4446443 ID=Msa0625440-mRNA-1:exon:1184;Parent=Msa0625440-mRNA-1
chr4_3 exon 4446898 4446969 4446898 ID=Msa0625440-mRNA-1:exon:1183;Parent=Msa0625440-mRNA-1
chr4_3 exon 4447041 4447103 4447041 ID=Msa0625440-mRNA-1:exon:1182;Parent=Msa0625440-mRNA-1
chr4_3 exon 4447400 4447463 4447400 ID=Msa0625440-mRNA-1:exon:1181;Parent=Msa0625440-mRNA-1
chr4_3 exon 4447613 4447801 4447613 ID=Msa0625440-mRNA-1:exon:1180;Parent=Msa0625440-mRNA-1
chr4_3 exon 4447895 4447970 4447895 ID=Msa0625440-mRNA-1:exon:1179;Parent=Msa0625440-mRNA-1
chr4_3 exon 4448052 4448077 4448052 ID=Msa0625440-mRNA-1:exon:1178;Parent=Msa0625440-mRNA-1
chr4_3 exon 4448186 4448540 4448186 ID=Msa0625440-mRNA-1:exon:1177;Parent=Msa0625440-mRNA-1
chr4_3 five_prime_UTR 4448392 4448540 4448392 ID=Msa0625440-mRNA-1:five_prime_utr;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4448186 4448391 4448186 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4448052 4448077 4448052 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4447895 4447970 4447895 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4447613 4447801 4447613 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4447400 4447463 4447400 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4447041 4447103 4447041 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4446898 4446969 4446898 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4446443 4446544 4446443 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4446012 4446086 4446012 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4445707 4445811 4445707 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4444363 4444479 4444363 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4443964 4444020 4443964 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 CDS 4443758 4443814 4443758 ID=Msa0625440-mRNA-1:cds;Parent=Msa0625440-mRNA-1
chr4_3 three_prime_UTR 4443500 4443757 4443500 ID=Msa0625440-mRNA-1:three_prime_utr;Parent=Msa0625440-mRNA-1
Gene Sequence

>Msa0625440

ATGTGGACTGCAATGTCCATCGGAAGCATCAACTGCAACTGCAATTGCAACGGTGGTTTGCTCCCGGTTCGAAGAATAATAATAAAAAATTGCTCGGATTCAAATTCTCGTGGCTTCGGAGGAGGTGCAGATAACAATAACAATAAAGTTGCTGCTGCTGCTGATAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGCAGCAGCAAGGGAAACCATCCACCAAACAGTCTCCTAAGCCGGCACCGCTTTTAACCTCACAGGTTGATGCTACAGACATTGACTTTCAGGAACGCCTCAACGCTATTAAAAGGTCAGCACTTGAGCAAAAGAAGGCAGAAGAGAATAAACAATTTGGACCAATTGACTATGATGCACCTATTTCTATTTCTTCAGAGTCAGACAACAAAACAATTGGCTTTGCTACCAAGGTTGGAATAGGTGTAGCTGTTGCAGTCTTTGGTCTCGTTTTTGCTCTTGGAGATTTTCTCCCATCAGGAAGTCCCAACCAAGACAGTGCTGTGGTCAATGATAAATTGTCAGAGAAGGATAAAGCTGCTCTTCAGAGTAGGCTTAAGGAATTTGAAGCAACATTAAGTAACTCCCCAAGAGATCCAACTGCTCTCGAAGGAGCTGCAGTAACTTTCGCAGAACTAGGAGAGTATCCAAGAGCTGCTTCTCTACTTGATGATTTGACAAAGGAAAAACCAAATGATGCTGATGCTTTTCGTTTGCTTGGAGAAGTAAAGTATGAACTCAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGTTCAGCAAAGGTATCTGAAGATATCAAATTTGAAGTTCTTCGTGGCCTTACCAATTCATTACTTGCTGCCAAGAAGCCAGATGAGGCTGTTCAATTACTTTTGGCCTGCCGTGAGCGTCTGAGTTCAGAAGACTTCAGCAGAAAATCTGATAGCAGCCCAACAGACTCACAGAAGCTGGATCCAATTCAAGTTGAATTACTTCTAGGGAAAGCCTATTCAGACTGGGGCCACGTCGGTGATGCCATAGCTATTTACGATCAGCTCATATCAACTCACCCTGATGATTTTCGTGGATATTTAGCCAAGGGAATTATCCTAAAAGAAAACAAAAACATTGGAGATGCTGAGAGGATGTTCATTCAAGCTAGGTTCTTTGCACCAGATAAAGCCAAAGCACTCGTGGACCGTTATTCAAGATAA

Protein sequence

>Msa0625440

MWTAMSIGSINCNCNCNGGLLPVRRIIIKNCSDSNSRGFGGGADNNNNKVAAAADKKKKKKKQQQQQQGKPSTKQSPKPAPLLTSQVDATDIDFQERLNAIKRSALEQKKAEENKQFGPIDYDAPISISSESDNKTIGFATKVGIGVAVAVFGLVFALGDFLPSGSPNQDSAVVNDKLSEKDKAALQSRLKEFEATLSNSPRDPTALEGAAVTFAELGEYPRAASLLDDLTKEKPNDADAFRLLGEVKYELKDYEGSVAAYKSSAKVSEDIKFEVLRGLTNSLLAAKKPDEAVQLLLACRERLSSEDFSRKSDSSPTDSQKLDPIQVELLLGKAYSDWGHVGDAIAIYDQLISTHPDDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR*