Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224120 | XP_003597565.1 | 99.789 | 475 | 1 | 0 | 1 | 475 | 1 | 475 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224120 | sp|Q9CAI5|CKL2_ARATH | 78.038 | 469 | 98 | 4 | 1 | 468 | 1 | 465 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224120 | G7IS36 | 99.789 | 475 | 1 | 0 | 1 | 475 | 1 | 475 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0224120 | Msa0265260 | 0.974181 | 1.047293e-137 | -8.615850e-47 |
| Msa0224120 | Msa1089200 | 0.955108 | 6.473554e-113 | -8.615850e-47 |
| Msa0224120 | Msa1364090 | 0.968610 | 6.374658e-129 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224120 | MtrunA17_Chr2g0329981 | 99.789 | 475 | 1 | 0 | 1 | 475 | 1 | 475 | 0.0 | 979 |
| Msa0224120 | MtrunA17_Chr8g0342821 | 83.229 | 477 | 75 | 5 | 1 | 475 | 1 | 474 | 0.0 | 808 |
| Msa0224120 | MtrunA17_Chr4g0071031 | 75.681 | 477 | 91 | 5 | 1 | 475 | 1 | 454 | 0.0 | 706 |
| Msa0224120 | MtrunA17_Chr2g0299661 | 69.787 | 470 | 138 | 3 | 1 | 470 | 1 | 466 | 0.0 | 677 |
| Msa0224120 | MtrunA17_Chr1g0183631 | 60.842 | 475 | 156 | 9 | 1 | 468 | 1 | 452 | 0.0 | 554 |
| Msa0224120 | MtrunA17_Chr7g0261501 | 73.639 | 349 | 90 | 1 | 1 | 349 | 1 | 347 | 0.0 | 550 |
| Msa0224120 | MtrunA17_Chr1g0166821 | 74.432 | 352 | 80 | 3 | 1 | 349 | 2 | 346 | 0.0 | 547 |
| Msa0224120 | MtrunA17_Chr1g0187571 | 69.474 | 380 | 109 | 3 | 1 | 380 | 2 | 374 | 0.0 | 536 |
| Msa0224120 | MtrunA17_Chr6g0486611 | 63.007 | 419 | 139 | 7 | 1 | 411 | 1 | 411 | 0.0 | 516 |
| Msa0224120 | MtrunA17_Chr8g0390211 | 63.706 | 394 | 132 | 5 | 1 | 392 | 1 | 385 | 9.63e-180 | 509 |
| Msa0224120 | MtrunA17_Chr3g0140071 | 66.667 | 342 | 107 | 2 | 1 | 342 | 1 | 335 | 4.31e-168 | 480 |
| Msa0224120 | MtrunA17_Chr1g0146151 | 66.972 | 327 | 107 | 1 | 1 | 327 | 1 | 326 | 1.93e-165 | 473 |
| Msa0224120 | MtrunA17_Chr1g0167261 | 69.159 | 321 | 95 | 3 | 1 | 317 | 2 | 322 | 4.99e-164 | 467 |
| Msa0224120 | MtrunA17_Chr7g0214531 | 38.710 | 279 | 154 | 5 | 9 | 273 | 37 | 312 | 5.44e-60 | 207 |
| Msa0224120 | MtrunA17_Chr3g0140431 | 38.828 | 273 | 156 | 5 | 9 | 273 | 38 | 307 | 8.12e-59 | 203 |
| Msa0224120 | MtrunA17_Chr1g0146301 | 38.462 | 273 | 157 | 5 | 9 | 273 | 124 | 393 | 2.99e-58 | 204 |
| Msa0224120 | MtrunA17_Chr1g0213321 | 37.770 | 278 | 161 | 5 | 9 | 277 | 119 | 393 | 1.44e-57 | 201 |
| Msa0224120 | MtrunA17_Chr7g0253211 | 38.062 | 289 | 161 | 6 | 4 | 277 | 317 | 602 | 2.82e-56 | 201 |
| Msa0224120 | MtrunA17_Chr8g0340491 | 36.879 | 282 | 156 | 7 | 9 | 273 | 128 | 404 | 2.97e-52 | 187 |
| Msa0224120 | MtrunA17_Chr5g0405421 | 26.957 | 230 | 151 | 7 | 2 | 223 | 92 | 312 | 4.22e-13 | 71.6 |
| Msa0224120 | MtrunA17_Chr3g0107011 | 27.917 | 240 | 118 | 11 | 1 | 214 | 5 | 215 | 1.35e-11 | 66.6 |
| Msa0224120 | MtrunA17_Chr7g0267751 | 27.602 | 221 | 128 | 9 | 9 | 215 | 135 | 337 | 1.83e-11 | 66.2 |
| Msa0224120 | MtrunA17_Chr7g0272841 | 24.781 | 343 | 186 | 13 | 8 | 324 | 67 | 363 | 2.30e-11 | 66.2 |
| Msa0224120 | MtrunA17_Chr8g0346071 | 30.942 | 223 | 122 | 13 | 4 | 213 | 13 | 216 | 7.08e-11 | 64.3 |
| Msa0224120 | MtrunA17_Chr4g0072831 | 32.258 | 155 | 81 | 7 | 1 | 153 | 2 | 134 | 8.62e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224120 | AT1G72710.1 | 78.038 | 469 | 98 | 4 | 1 | 468 | 1 | 465 | 0.0 | 738 |
| Msa0224120 | AT4G26100.1 | 71.550 | 471 | 109 | 5 | 1 | 471 | 1 | 446 | 0.0 | 677 |
| Msa0224120 | AT5G57015.1 | 69.538 | 476 | 102 | 6 | 1 | 475 | 1 | 434 | 0.0 | 664 |
| Msa0224120 | AT2G19470.1 | 82.569 | 327 | 57 | 0 | 1 | 327 | 1 | 327 | 0.0 | 590 |
| Msa0224120 | AT3G23340.1 | 73.371 | 353 | 83 | 3 | 1 | 349 | 1 | 346 | 0.0 | 545 |
| Msa0224120 | AT5G44100.1 | 81.818 | 297 | 54 | 0 | 1 | 297 | 1 | 297 | 0.0 | 541 |
| Msa0224120 | AT5G44100.2 | 81.818 | 297 | 54 | 0 | 1 | 297 | 1 | 297 | 0.0 | 541 |
| Msa0224120 | AT1G03930.1 | 81.481 | 297 | 55 | 0 | 1 | 297 | 1 | 297 | 0.0 | 541 |
| Msa0224120 | AT4G14340.1 | 65.625 | 416 | 120 | 7 | 1 | 411 | 7 | 404 | 0.0 | 539 |
| Msa0224120 | AT4G28540.1 | 60.131 | 459 | 164 | 6 | 1 | 449 | 5 | 454 | 0.0 | 530 |
| Msa0224120 | AT5G43320.1 | 64.455 | 422 | 119 | 6 | 1 | 406 | 1 | 407 | 0.0 | 530 |
| Msa0224120 | AT1G04440.1 | 70.286 | 350 | 103 | 1 | 1 | 349 | 1 | 350 | 0.0 | 525 |
| Msa0224120 | AT4G14340.2 | 74.775 | 333 | 75 | 3 | 1 | 330 | 7 | 333 | 0.0 | 525 |
| Msa0224120 | AT5G43320.2 | 73.780 | 328 | 84 | 1 | 1 | 328 | 1 | 326 | 0.0 | 513 |
| Msa0224120 | AT5G43320.3 | 73.780 | 328 | 84 | 1 | 1 | 328 | 1 | 326 | 0.0 | 513 |
| Msa0224120 | AT3G23340.2 | 72.973 | 333 | 79 | 3 | 21 | 349 | 7 | 332 | 3.78e-180 | 511 |
| Msa0224120 | AT4G28860.2 | 68.272 | 353 | 106 | 4 | 1 | 352 | 1 | 348 | 4.55e-178 | 504 |
| Msa0224120 | AT4G28880.3 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0224120 | AT4G28880.2 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0224120 | AT4G28880.1 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0224120 | AT4G28880.4 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0224120 | AT4G28860.1 | 74.351 | 308 | 79 | 0 | 1 | 308 | 1 | 308 | 1.14e-177 | 504 |
| Msa0224120 | AT4G08800.1 | 70.164 | 305 | 59 | 2 | 1 | 305 | 1 | 273 | 3.36e-158 | 450 |
| Msa0224120 | AT2G25760.2 | 39.721 | 287 | 156 | 5 | 4 | 273 | 100 | 386 | 1.46e-63 | 218 |
| Msa0224120 | AT2G25760.1 | 39.024 | 287 | 155 | 6 | 4 | 273 | 100 | 383 | 1.72e-60 | 210 |
| Msa0224120 | AT3G03940.1 | 37.716 | 289 | 162 | 6 | 4 | 277 | 133 | 418 | 4.10e-57 | 201 |
| Msa0224120 | AT5G18190.2 | 37.370 | 289 | 163 | 6 | 4 | 277 | 123 | 408 | 1.54e-56 | 199 |
| Msa0224120 | AT5G18190.1 | 37.370 | 289 | 163 | 6 | 4 | 277 | 123 | 408 | 1.54e-56 | 199 |
| Msa0224120 | AT3G13670.1 | 36.396 | 283 | 163 | 5 | 9 | 277 | 137 | 416 | 9.09e-56 | 197 |
| Msa0224120 | AT2G17890.1 | 26.667 | 225 | 148 | 8 | 7 | 223 | 106 | 321 | 5.02e-13 | 71.6 |
| Msa0224120 | AT3G06030.1 | 28.054 | 221 | 130 | 8 | 8 | 213 | 67 | 273 | 3.10e-12 | 69.3 |
| Msa0224120 | AT3G50530.1 | 26.271 | 236 | 133 | 10 | 5 | 219 | 144 | 359 | 1.09e-11 | 67.4 |
| Msa0224120 | AT4G36070.1 | 26.244 | 221 | 146 | 7 | 7 | 219 | 69 | 280 | 1.29e-11 | 67.0 |
| Msa0224120 | AT4G36070.2 | 26.244 | 221 | 146 | 7 | 7 | 219 | 69 | 280 | 1.41e-11 | 67.0 |
| Msa0224120 | AT5G21326.1 | 27.311 | 238 | 121 | 11 | 1 | 214 | 6 | 215 | 1.93e-11 | 66.2 |
| Msa0224120 | AT1G09000.1 | 27.313 | 227 | 136 | 8 | 1 | 213 | 63 | 274 | 2.24e-11 | 66.6 |
| Msa0224120 | AT1G09000.2 | 27.313 | 227 | 136 | 8 | 1 | 213 | 63 | 274 | 2.69e-11 | 66.2 |
Find 150 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATAAAACCCTAGAAAT+TGG | 0.164625 | 2_1:+73881921 | None:intergenic |
| TCTGGTGCTGGGCCAAGTTC+TGG | 0.217410 | 2_1:-73877790 | Msa0224120:CDS |
| TGTTCTTGTAATGGATTTAC+TGG | 0.238900 | 2_1:-73880672 | Msa0224120:CDS |
| ATCTCCAATTCCCAATTTCT+AGG | 0.245279 | 2_1:-73881932 | Msa0224120:five_prime_UTR |
| ATATTGCAGGGTTCTGGTGC+TGG | 0.265600 | 2_1:-73877802 | Msa0224120:intron |
| CCTTCTCGTCATTGAAATTC+AGG | 0.271965 | 2_1:+73876515 | None:intergenic |
| TTCCGTCTTGGTCGCAAAAT+TGG | 0.279587 | 2_1:-73881859 | Msa0224120:CDS |
| TCCTCCCCTCAGGGTTGCTT+TGG | 0.290501 | 2_1:+73882130 | None:intergenic |
| GAAAACAAATTACGTTTGTT+TGG | 0.300456 | 2_1:-73882156 | Msa0224120:five_prime_UTR |
| AGTGGCATATTGCAGGGTTC+TGG | 0.307259 | 2_1:-73877808 | Msa0224120:intron |
| GTGAGATGGTTTGGCGTAGA+AGG | 0.320994 | 2_1:-73880704 | Msa0224120:CDS |
| CCCATCAGCATATACCTTAC+AGG | 0.322211 | 2_1:-73880243 | Msa0224120:intron |
| ATATTCATTCTTATCTTTAG+AGG | 0.335491 | 2_1:-73876184 | Msa0224120:three_prime_UTR |
| TGTCTAGTTCTAATTTCTTC+CGG | 0.335964 | 2_1:-73876777 | Msa0224120:CDS |
| AACCCTCTCTTCCTCTTGCC+AGG | 0.341730 | 2_1:-73876684 | Msa0224120:CDS |
| GAAAAGGCGAGGGACAAAAT+TGG | 0.377134 | 2_1:+73882024 | None:intergenic |
| CGCCAAACCATCTCACATTC+GGG | 0.397128 | 2_1:+73880711 | None:intergenic |
| AAGTTTCCATCATTTACAAT+AGG | 0.399390 | 2_1:+73877430 | None:intergenic |
| TGGTTTGATCTAGTTGCTGC+TGG | 0.401251 | 2_1:-73882198 | Msa0224120:five_prime_UTR |
| ATGAATACACATCTTGGAAT+TGG | 0.405893 | 2_1:-73878650 | Msa0224120:intron |
| AATCGAAGACATAATCAAAC+TGG | 0.405895 | 2_1:+73877953 | None:intergenic |
| AAACCCTAGAAATTGGGAAT+TGG | 0.406920 | 2_1:+73881928 | None:intergenic |
| CTTGCCAGGGATGGTAGTCC+TGG | 0.411315 | 2_1:-73876670 | Msa0224120:CDS |
| AGAAATTGGGAATTGGAGAT+TGG | 0.411923 | 2_1:+73881935 | None:intergenic |
| AGATTGCTGATACTTCAAAA+TGG | 0.414687 | 2_1:+73877927 | None:intergenic |
| AGACAACTTCCTCATGGGTC+TGG | 0.419334 | 2_1:-73880429 | Msa0224120:CDS |
| AGATTGTCTCTCCTCCCCTC+AGG | 0.425290 | 2_1:+73882120 | None:intergenic |
| CTAATAAAACCCTAGAAATT+GGG | 0.429752 | 2_1:+73881922 | None:intergenic |
| CACAAAGCAACAACATCTTC+TGG | 0.430594 | 2_1:-73876592 | Msa0224120:CDS |
| TATTGCAGGGTTCTGGTGCT+GGG | 0.431101 | 2_1:-73877801 | Msa0224120:intron |
| ACGCCAAACCATCTCACATT+CGG | 0.433060 | 2_1:+73880710 | None:intergenic |
| TTCTGTTTAGGTGGGGAAGA+TGG | 0.440368 | 2_1:-73877505 | Msa0224120:intron |
| AGAGTACAATGTTCTTGTAA+TGG | 0.440882 | 2_1:-73880681 | Msa0224120:CDS |
| CAGATTATGCATATCTGAAA+AGG | 0.441444 | 2_1:-73878136 | Msa0224120:CDS |
| TTTATGGGTAAAGCTTTGTC+AGG | 0.442027 | 2_1:+73876309 | None:intergenic |
| GAAGGAGTTGGTGAAGAGAA+AGG | 0.444415 | 2_1:+73881963 | None:intergenic |
| CTGAATAAATCCTCGAGACT+TGG | 0.445414 | 2_1:+73880647 | None:intergenic |
| TTTCTACAGCCTTCCATGGC+AGG | 0.446289 | 2_1:-73878394 | Msa0224120:intron |
| TCTTGATCACCGTATCTTGT+TGG | 0.448965 | 2_1:-73876471 | Msa0224120:three_prime_UTR |
| GAAAGTTTCTACTTCTATTG+AGG | 0.449245 | 2_1:-73878322 | Msa0224120:intron |
| GACAACTTCCTCATGGGTCT+GGG | 0.451955 | 2_1:-73880428 | Msa0224120:CDS |
| GCTAGTATGAATACACATCT+TGG | 0.455950 | 2_1:-73878656 | Msa0224120:CDS |
| AAATGGATCTAAAGAAGTTA+TGG | 0.456366 | 2_1:-73877374 | Msa0224120:intron |
| TCTGGACCTATTGTAAATGA+TGG | 0.460186 | 2_1:-73877436 | Msa0224120:CDS |
| AGTTTGATTATGTCTTCGAT+TGG | 0.464178 | 2_1:-73877951 | Msa0224120:CDS |
| AAGGAGTTGGTGAAGAGAAA+GGG | 0.465579 | 2_1:+73881964 | None:intergenic |
| ATCCCGAATGTGAGATGGTT+TGG | 0.467028 | 2_1:-73880713 | Msa0224120:CDS |
| AGAGAGAATAAGAACTTGAC+AGG | 0.470574 | 2_1:-73878692 | Msa0224120:CDS |
| AACAACTGCATCACGACTGT+TGG | 0.471395 | 2_1:+73876720 | None:intergenic |
| GATCCAATGGAACCTCGTAT+TGG | 0.480777 | 2_1:-73881889 | Msa0224120:exon |
| AATTGGAGATTGGAAATTGA+AGG | 0.482525 | 2_1:+73881945 | None:intergenic |
| CTCTCAGCACTCACAACAGC+TGG | 0.493489 | 2_1:+73877760 | None:intergenic |
| ACCTGTAAGGTATATGCTGA+TGG | 0.497924 | 2_1:+73880242 | None:intergenic |
| TCTCCAATTCCCAATTTCTA+GGG | 0.498461 | 2_1:-73881931 | Msa0224120:five_prime_UTR |
| TTACCAATACGAGGTTCCAT+TGG | 0.498879 | 2_1:+73881886 | None:intergenic |
| GGCTACGTGTTTATTCGAGT+TGG | 0.499829 | 2_1:+73882224 | None:intergenic |
| ACCCTCTCTTCCTCTTGCCA+GGG | 0.500811 | 2_1:-73876683 | Msa0224120:CDS |
| GTACAACAACTGAGGATGCT+TGG | 0.501916 | 2_1:+73880884 | None:intergenic |
| TTTAGCAAGACCGAAGTCAA+TGG | 0.503927 | 2_1:+73880285 | None:intergenic |
| GGAGCACTCCTTAAAACCTC+TGG | 0.508111 | 2_1:-73876649 | Msa0224120:CDS |
| GAGGAAAGCTACTACAAGTT+GGG | 0.512386 | 2_1:-73876378 | Msa0224120:three_prime_UTR |
| AGACCCATGAGGAAGTTGTC+TGG | 0.513231 | 2_1:+73880431 | None:intergenic |
| TCTCTTCCTCTTGCCAGGGA+TGG | 0.513542 | 2_1:-73876679 | Msa0224120:CDS |
| AAAATTGGTAGCGGATCCTT+CGG | 0.514691 | 2_1:-73881844 | Msa0224120:CDS |
| CCAGAGTTTCTTCTACGAGC+AGG | 0.515799 | 2_1:+73877454 | None:intergenic |
| GTTGGTGAAGAGAAAGGGAA+GGG | 0.515890 | 2_1:+73881969 | None:intergenic |
| AATGGCAGAAAATACCTGTA+AGG | 0.515910 | 2_1:+73880229 | None:intergenic |
| CCATTTGAGTCACTTGGTAC+CGG | 0.517246 | 2_1:+73877391 | None:intergenic |
| TTGGTGAAGAGAAAGGGAAG+GGG | 0.518174 | 2_1:+73881970 | None:intergenic |
| TGGTGAAGAGAAAGGGAAGG+GGG | 0.518932 | 2_1:+73881971 | None:intergenic |
| GAGTTGCATGTAGAGATACT+TGG | 0.520768 | 2_1:+73882246 | None:intergenic |
| TTAAACCTTCACGAATGAAA+AGG | 0.521136 | 2_1:+73878102 | None:intergenic |
| TATTCATTCTTATCTTTAGA+GGG | 0.522333 | 2_1:-73876183 | Msa0224120:three_prime_UTR |
| GCTGGTGGTAAGCCAGAACT+TGG | 0.528434 | 2_1:+73877778 | None:intergenic |
| ATACGAGGTTCCATTGGATC+GGG | 0.530519 | 2_1:+73881892 | None:intergenic |
| TTAGATCCATTTGAGTCACT+TGG | 0.530625 | 2_1:+73877385 | None:intergenic |
| CCGGTACCAAGTGACTCAAA+TGG | 0.531968 | 2_1:-73877391 | Msa0224120:CDS |
| TGAGGAAAGCTACTACAAGT+TGG | 0.532375 | 2_1:-73876379 | Msa0224120:three_prime_UTR |
| ACTCGAATAAACACGTAGCC+AGG | 0.534403 | 2_1:-73882221 | Msa0224120:five_prime_UTR |
| GTGAGTGCTGAGAGACCATC+AGG | 0.536378 | 2_1:-73877751 | Msa0224120:intron |
| TTGTATAAAGCTGAAGCTGA+AGG | 0.536566 | 2_1:+73876249 | None:intergenic |
| AAGTTGTATAAAGTACTTCA+AGG | 0.537249 | 2_1:-73880855 | Msa0224120:CDS |
| TTGTGCTCCGATGATGTGAT+AGG | 0.538146 | 2_1:+73876610 | None:intergenic |
| GGGGAAGATGGTAGACATGC+TGG | 0.538151 | 2_1:-73877493 | Msa0224120:CDS |
| ATTGGTAACAAGTTCCGTCT+TGG | 0.539261 | 2_1:-73881871 | Msa0224120:CDS |
| TAGGTGTATGCCATTGACTT+CGG | 0.549001 | 2_1:-73880295 | Msa0224120:CDS |
| TCTAATTTCTTCCGGCCTAG+TGG | 0.549750 | 2_1:-73876769 | Msa0224120:CDS |
| CCTTAAAACTGTACTCATGC+TGG | 0.552041 | 2_1:-73880603 | Msa0224120:CDS |
| CAAACCAGACAACTTCCTCA+TGG | 0.552695 | 2_1:-73880435 | Msa0224120:CDS |
| GATTGTCTCTCCTCCCCTCA+GGG | 0.553551 | 2_1:+73882121 | None:intergenic |
| TCCATTACTGTCGGTCATTG+CGG | 0.553748 | 2_1:-73878172 | Msa0224120:CDS |
| TTCTACAGCCTTCCATGGCA+GGG | 0.557366 | 2_1:-73878393 | Msa0224120:intron |
| TGCTCCAGGACTACCATCCC+TGG | 0.557499 | 2_1:+73876666 | None:intergenic |
| AGGTATATGCTGATGGGTAG+AGG | 0.560253 | 2_1:+73880249 | None:intergenic |
| AGTTGGTGAAGAGAAAGGGA+AGG | 0.564963 | 2_1:+73881968 | None:intergenic |
| AGATTGGAAATTGAAGGAGT+TGG | 0.567018 | 2_1:+73881951 | None:intergenic |
| AATACGAGGTTCCATTGGAT+CGG | 0.571470 | 2_1:+73881891 | None:intergenic |
| TGAATTTCTTTGAGCACCAG+AGG | 0.572897 | 2_1:+73876633 | None:intergenic |
| CTTACAATGGCACGTGCAGA+AGG | 0.576744 | 2_1:+73877892 | None:intergenic |
| ACCGCAATGACCGACAGTAA+TGG | 0.577382 | 2_1:+73878171 | None:intergenic |
| AAGTACGAAGCGAATTCTGA+GGG | 0.578038 | 2_1:+73878194 | None:intergenic |
| ACAACTTCCTCATGGGTCTG+GGG | 0.578843 | 2_1:-73880427 | Msa0224120:CDS |
| CCATGGCAGGGATTAAAAGC+AGG | 0.580774 | 2_1:-73878381 | Msa0224120:CDS |
| CTTCGTACTTCCATTACTGT+CGG | 0.580895 | 2_1:-73878181 | Msa0224120:CDS |
| CCTGTAAGGTATATGCTGAT+GGG | 0.582308 | 2_1:+73880243 | None:intergenic |
| CCTGCTCGTAGAAGAAACTC+TGG | 0.583504 | 2_1:-73877454 | Msa0224120:CDS |
| GGTATTTCTACAGCCTTCCA+TGG | 0.584276 | 2_1:-73878398 | Msa0224120:intron |
| AAACCAGACAACTTCCTCAT+GGG | 0.585296 | 2_1:-73880434 | Msa0224120:CDS |
| GTGATTCTAAGTCGTCCCTA+CGG | 0.586077 | 2_1:+73878526 | None:intergenic |
| CTGGTATCCCGAATGTGAGA+TGG | 0.591046 | 2_1:-73880718 | Msa0224120:CDS |
| GTCTTGTAGATCCACTAGGC+CGG | 0.591531 | 2_1:+73876758 | None:intergenic |
| TCCTTCGGCGAGATCTATCT+CGG | 0.591939 | 2_1:-73881829 | Msa0224120:intron |
| TGTATAAAGCTGAAGCTGAA+GGG | 0.592495 | 2_1:+73876250 | None:intergenic |
| ATCCCTGGCAAGAGGAAGAG+AGG | 0.593199 | 2_1:+73876681 | None:intergenic |
| GTTCTTGTAATGGATTTACT+GGG | 0.597182 | 2_1:-73880671 | Msa0224120:CDS |
| ACTCATGCTGGCTGATCAGA+TGG | 0.600494 | 2_1:-73880591 | Msa0224120:intron |
| TTTATCAGAGCAAAGCCGTA+GGG | 0.600968 | 2_1:-73878541 | Msa0224120:intron |
| AAATTCACCTATCACATCAT+CGG | 0.605560 | 2_1:-73876617 | Msa0224120:CDS |
| AATGGCACGTGCAGAAGGAG+TGG | 0.609634 | 2_1:+73877897 | None:intergenic |
| AAATATTCAGACAAATGAAG+AGG | 0.611556 | 2_1:-73881704 | Msa0224120:CDS |
| TGAGGGGTAGCCACGACACA+AGG | 0.615164 | 2_1:+73878211 | None:intergenic |
| GCCAAAGCAACCCTGAGGGG+AGG | 0.618002 | 2_1:-73882131 | Msa0224120:five_prime_UTR |
| CTTGGTCGCAAAATTGGTAG+CGG | 0.618071 | 2_1:-73881853 | Msa0224120:CDS |
| CCTGAATTTCAATGACGAGA+AGG | 0.618175 | 2_1:-73876515 | Msa0224120:CDS |
| GGACTACCATCCCTGGCAAG+AGG | 0.621909 | 2_1:+73876673 | None:intergenic |
| GAAGTACGAAGCGAATTCTG+AGG | 0.623073 | 2_1:+73878193 | None:intergenic |
| CAAGATACGGTGATCAAGAG+TGG | 0.624843 | 2_1:+73876475 | None:intergenic |
| ATTTATCAGAGCAAAGCCGT+AGG | 0.626916 | 2_1:-73878542 | Msa0224120:intron |
| TCCCTGGCAAGAGGAAGAGA+GGG | 0.628185 | 2_1:+73876682 | None:intergenic |
| TCAGCACTCACAACAGCTGG+TGG | 0.637376 | 2_1:+73877763 | None:intergenic |
| GGATGCCAAAGCAACCCTGA+GGG | 0.640195 | 2_1:-73882135 | Msa0224120:five_prime_UTR |
| CGGAACTTGTTACCAATACG+AGG | 0.640695 | 2_1:+73881877 | None:intergenic |
| AATTCAGGCTCTCAATACCT+CGG | 0.640782 | 2_1:+73876530 | None:intergenic |
| ACTTCCTCATGGGTCTGGGG+AGG | 0.643093 | 2_1:-73880424 | Msa0224120:CDS |
| ACTCGTCTTGTAGATCCACT+AGG | 0.645996 | 2_1:+73876754 | None:intergenic |
| AGTGGATCTACAAGACGAGT+AGG | 0.648511 | 2_1:-73876751 | Msa0224120:CDS |
| TTTACTGGGACCAAGTCTCG+AGG | 0.649748 | 2_1:-73880657 | Msa0224120:CDS |
| CTTTCTCACAAACTGCCGAG+TGG | 0.656272 | 2_1:-73876426 | Msa0224120:three_prime_UTR |
| AAGATGGTAGACATGCTGGT+TGG | 0.660444 | 2_1:-73877489 | Msa0224120:CDS |
| ACCGAGATAGATCTCGCCGA+AGG | 0.660795 | 2_1:+73881828 | None:intergenic |
| AGGGACGACTTAGAATCACT+TGG | 0.661964 | 2_1:-73878522 | Msa0224120:CDS |
| AGCAACTAGATCAAACCACC+TGG | 0.668663 | 2_1:+73882203 | None:intergenic |
| TTTGATTCGTACAACAACTG+AGG | 0.675406 | 2_1:+73880876 | None:intergenic |
| ACAACAGACAACAATCCACT+CGG | 0.678434 | 2_1:+73876411 | None:intergenic |
| TGGATGCCAAAGCAACCCTG+AGG | 0.691305 | 2_1:-73882136 | Msa0224120:five_prime_UTR |
| GATGCCAAAGCAACCCTGAG+GGG | 0.694229 | 2_1:-73882134 | Msa0224120:five_prime_UTR |
| CGAATAAACACGTAGCCAGG+TGG | 0.702448 | 2_1:-73882218 | Msa0224120:five_prime_UTR |
| CTCGCCTCCCCAGACCCATG+AGG | 0.716204 | 2_1:+73880420 | None:intergenic |
| TTGTATAAAGTACTTCAAGG+CGG | 0.746900 | 2_1:-73880852 | Msa0224120:CDS |
| AGTACGAAGCGAATTCTGAG+GGG | 0.755113 | 2_1:+73878195 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATATTATTAATTA+AGG | + | chr2_1:73879211-73879230 | None:intergenic | 0.0% |
| !! | ATTGAAAATAATAATAATGA+TGG | + | chr2_1:73876557-73876576 | None:intergenic | 10.0% |
| !!! | TTTAATTAATTTGAAAATTC+AGG | - | chr2_1:73876602-73876621 | Msa0224120:CDS | 10.0% |
| !!! | TGTATTTTAAAATATTGTTT+TGG | - | chr2_1:73880039-73880058 | Msa0224120:intron | 10.0% |
| !!! | TTTTACTTTTGAAATTATTA+AGG | - | chr2_1:73880276-73880295 | Msa0224120:CDS | 10.0% |
| !!! | TTAATGTTTTTTTTTTAATG+GGG | - | chr2_1:73880766-73880785 | Msa0224120:intron | 10.0% |
| !!! | TTTTTTTTGAAAAATTAATG+GGG | - | chr2_1:73880800-73880819 | Msa0224120:intron | 10.0% |
| !! | GATTTAGGTAAATAAAAAAT+AGG | + | chr2_1:73877796-73877815 | None:intergenic | 15.0% |
| !! | TATTTACCTAAATCTTAATA+TGG | - | chr2_1:73877802-73877821 | Msa0224120:intron | 15.0% |
| !! | ATTTACCTAAATCTTAATAT+GGG | - | chr2_1:73877803-73877822 | Msa0224120:intron | 15.0% |
| !! | TCACAAAAACTAAATAAAAA+TGG | + | chr2_1:73878124-73878143 | None:intergenic | 15.0% |
| !!! | TTTTAACTATATGAAATTAG+AGG | - | chr2_1:73878181-73878200 | Msa0224120:CDS | 15.0% |
| !!! | TAAAAGTATTAGCTTTAATT+CGG | - | chr2_1:73878305-73878324 | Msa0224120:intron | 15.0% |
| !! | AATCAATAGAAAGAAAATTA+AGG | - | chr2_1:73878723-73878742 | Msa0224120:intron | 15.0% |
| !!! | TTCATTTTGACTTAAAAAAA+AGG | + | chr2_1:73879044-73879063 | None:intergenic | 15.0% |
| !! | ATATAAATAAGAAAACAAAG+AGG | + | chr2_1:73880257-73880276 | None:intergenic | 15.0% |
| !!! | GAAAAGTTATATATCATTTT+TGG | - | chr2_1:73881279-73881298 | Msa0224120:intron | 15.0% |
| !! | TATATAAAAAAGATGCTTAT+GGG | - | chr2_1:73881992-73882011 | Msa0224120:five_prime_UTR | 15.0% |
| !! | AAAAAGAATGAAAATAAAAG+AGG | + | chr2_1:73882114-73882133 | None:intergenic | 15.0% |
| !!! | TATTTTCATTCTTTTTTTGT+TGG | - | chr2_1:73882118-73882137 | Msa0224120:five_prime_UTR | 15.0% |
| !!! | ATATTGTAAGGGTATAAATT+CGG | + | chr2_1:73877524-73877543 | None:intergenic | 20.0% |
| !! | AGTAAACTAAGATATTGTAA+GGG | + | chr2_1:73877535-73877554 | None:intergenic | 20.0% |
| !! | AAGTAAACTAAGATATTGTA+AGG | + | chr2_1:73877536-73877555 | None:intergenic | 20.0% |
| !!! | ATTTATTCAGTTTTTGTAGT+CGG | - | chr2_1:73877698-73877717 | Msa0224120:intron | 20.0% |
| !! | TTTACCTAAATCTTAATATG+GGG | - | chr2_1:73877804-73877823 | Msa0224120:intron | 20.0% |
| !!! | ATTCCAAATCATTTTTACAT+AGG | - | chr2_1:73877869-73877888 | Msa0224120:intron | 20.0% |
| !!! | TTCCAAATCATTTTTACATA+GGG | - | chr2_1:73877870-73877889 | Msa0224120:intron | 20.0% |
| !!! | TTTTGTGAATTTATGTGTAA+TGG | - | chr2_1:73878136-73878155 | Msa0224120:CDS | 20.0% |
| !! | ATATGAAATTAGAGGAAATT+AGG | - | chr2_1:73878189-73878208 | Msa0224120:CDS | 20.0% |
| !!! | AAAAGTATTAGCTTTAATTC+GGG | - | chr2_1:73878306-73878325 | Msa0224120:intron | 20.0% |
| !!! | ATATAACTTGTTACTATAGT+GGG | + | chr2_1:73878523-73878542 | None:intergenic | 20.0% |
| !! | GTAACAAGTTATATGAAAAT+TGG | - | chr2_1:73878529-73878548 | Msa0224120:CDS | 20.0% |
| !!! | TAATTTAAAAGCAGTTGATA+AGG | + | chr2_1:73879899-73879918 | None:intergenic | 20.0% |
| !! | GTAAATATAATTATACCTGA+TGG | + | chr2_1:73880599-73880618 | None:intergenic | 20.0% |
| !! | CAACTAGATTTATAAAGTAT+TGG | - | chr2_1:73881175-73881194 | Msa0224120:intron | 20.0% |
| !!! | TCATGTTATTTTTGACATTT+TGG | - | chr2_1:73881515-73881534 | Msa0224120:intron | 20.0% |
| !!! | AAAATTTTACCAACAAGATA+CGG | + | chr2_1:73881873-73881892 | None:intergenic | 20.0% |
| !! | GTATATAAAAAAGATGCTTA+TGG | - | chr2_1:73881991-73882010 | Msa0224120:five_prime_UTR | 20.0% |
| !! | ATATAAAAAAGATGCTTATG+GGG | - | chr2_1:73881993-73882012 | Msa0224120:five_prime_UTR | 20.0% |
| !! | ATATTCATTCTTATCTTTAG+AGG | - | chr2_1:73882148-73882167 | Msa0224120:five_prime_UTR | 20.0% |
| !! | TATTCATTCTTATCTTTAGA+GGG | - | chr2_1:73882149-73882168 | Msa0224120:five_prime_UTR | 20.0% |
| ! | GAAAACAAATTACGTTTGTT+TGG | - | chr2_1:73876176-73876195 | Msa0224120:three_prime_UTR | 25.0% |
| ! | AGAAGTGAAAAATGAAGAAA+AGG | + | chr2_1:73876327-73876346 | None:intergenic | 25.0% |
| ! | CTAATAAAACCCTAGAAATT+GGG | + | chr2_1:73876413-73876432 | None:intergenic | 25.0% |
| !!! | ATGATGGATTGAAAAATTGA+AGG | + | chr2_1:73876541-73876560 | None:intergenic | 25.0% |
| ! | AAATATTCAGACAAATGAAG+AGG | - | chr2_1:73876628-73876647 | Msa0224120:CDS | 25.0% |
| ! | TTTATGTGTATGTGTATGTT+TGG | - | chr2_1:73876787-73876806 | Msa0224120:intron | 25.0% |
| !! | TATGTAAAGTGATTTGTGTT+TGG | - | chr2_1:73876847-73876866 | Msa0224120:intron | 25.0% |
| ! | AACAAAACTACATGAATGTT+TGG | + | chr2_1:73877064-73877083 | None:intergenic | 25.0% |
| ! | AGTGTGCAAAATTGAAATAA+AGG | - | chr2_1:73877109-73877128 | Msa0224120:intron | 25.0% |
| !!! | TTTTGTTTGAACTTTTGTAG+AGG | - | chr2_1:73877163-73877182 | Msa0224120:intron | 25.0% |
| !! | AAGTTGTATAAAGTACTTCA+AGG | - | chr2_1:73877477-73877496 | Msa0224120:CDS | 25.0% |
| ! | TCATTAGACTTCATATTACT+CGG | - | chr2_1:73877555-73877574 | Msa0224120:intron | 25.0% |
| !! | TTACTCGGATTAAATGTTTT+CGG | - | chr2_1:73877570-73877589 | Msa0224120:intron | 25.0% |
| ! | ATTTCCCCATATTAAGATTT+AGG | + | chr2_1:73877811-73877830 | None:intergenic | 25.0% |
| ! | CAAAAGAGGTAAATTTGAAA+AGG | + | chr2_1:73878017-73878036 | None:intergenic | 25.0% |
| !! | TTCAAATTTACCTCTTTTGT+AGG | - | chr2_1:73878018-73878037 | Msa0224120:intron | 25.0% |
| !!! | CATATAACTTGTTACTATAG+TGG | + | chr2_1:73878524-73878543 | None:intergenic | 25.0% |
| !!! | GTATTTTTCAACAGAGAAAA+TGG | - | chr2_1:73878745-73878764 | Msa0224120:intron | 25.0% |
| ! | TAAGTCAAAATGAAGAAGAA+AGG | - | chr2_1:73879050-73879069 | Msa0224120:intron | 25.0% |
| ! | AAGTCAAAATGAAGAAGAAA+GGG | - | chr2_1:73879051-73879070 | Msa0224120:intron | 25.0% |
| ! | TAGAAAAAGGCTTATATGTT+GGG | - | chr2_1:73879439-73879458 | Msa0224120:intron | 25.0% |
| ! | AGGAAGATAAAACAACATAA+TGG | + | chr2_1:73879879-73879898 | None:intergenic | 25.0% |
| !! | TTTTAATGTTGTCTGTGTTT+TGG | - | chr2_1:73880329-73880348 | Msa0224120:intron | 25.0% |
| !!! | CGTTACTTGTTATTTTGTTT+AGG | - | chr2_1:73880484-73880503 | Msa0224120:CDS | 25.0% |
| ! | GTTAAATTGTCTTACTTAAG+TGG | - | chr2_1:73880506-73880525 | Msa0224120:intron | 25.0% |
| ! | ACTAATAGTACAGTAAGAAA+TGG | + | chr2_1:73880742-73880761 | None:intergenic | 25.0% |
| ! | AAGTTTCCATCATTTACAAT+AGG | + | chr2_1:73880905-73880924 | None:intergenic | 25.0% |
| ! | AAATGGATCTAAAGAAGTTA+TGG | - | chr2_1:73880958-73880977 | Msa0224120:intron | 25.0% |
| ! | ATGGTGAGTATATTCATTTA+TGG | - | chr2_1:73880977-73880996 | Msa0224120:intron | 25.0% |
| ! | TGGTGAGTATATTCATTTAT+GGG | - | chr2_1:73880978-73880997 | Msa0224120:intron | 25.0% |
| ! | TTCTTAAACAGAAAGTAATG+AGG | + | chr2_1:73881084-73881103 | None:intergenic | 25.0% |
| ! | AGAAGAAAAGAAGCAAAAAA+GGG | + | chr2_1:73881150-73881169 | None:intergenic | 25.0% |
| ! | CAAAAATCATGAATTAACCT+CGG | + | chr2_1:73881433-73881452 | None:intergenic | 25.0% |
| ! | AGCTGCAATAAAAAAAATCA+GGG | + | chr2_1:73881490-73881509 | None:intergenic | 25.0% |
| ! | TAGCTGCAATAAAAAAAATC+AGG | + | chr2_1:73881491-73881510 | None:intergenic | 25.0% |
| !!! | ATTTTTGACATTTTGGTCTA+TGG | - | chr2_1:73881522-73881541 | Msa0224120:intron | 25.0% |
| !!! | GCATCTTTTTTATATACTTG+TGG | + | chr2_1:73881988-73882007 | None:intergenic | 25.0% |
| AAAAAAAGAGTTTCTCTCAC+TGG | + | chr2_1:73876285-73876304 | None:intergenic | 30.0% | |
| AATTGGAGATTGGAAATTGA+AGG | + | chr2_1:73876390-73876409 | None:intergenic | 30.0% | |
| CCTAATAAAACCCTAGAAAT+TGG | + | chr2_1:73876414-73876433 | None:intergenic | 30.0% | |
| !!! | CCAATTTCTAGGGTTTTATT+AGG | - | chr2_1:73876411-73876430 | Msa0224120:three_prime_UTR | 30.0% |
| !!! | CAAACATGCAAGTTTTGTTT+TGG | + | chr2_1:73876727-73876746 | None:intergenic | 30.0% |
| AACAAAACTTGCATGTTTGT+TGG | - | chr2_1:73876728-73876747 | Msa0224120:CDS | 30.0% | |
| !! | TGTATGTGTATGTTTGGTTT+TGG | - | chr2_1:73876793-73876812 | Msa0224120:intron | 30.0% |
| !!! | GTATGTGTATGTTTGGTTTT+GGG | - | chr2_1:73876794-73876813 | Msa0224120:intron | 30.0% |
| !!! | TATGTGTATGTTTGGTTTTG+GGG | - | chr2_1:73876795-73876814 | Msa0224120:intron | 30.0% |
| ACATTCATGTAAAAGTGAGT+TGG | - | chr2_1:73876872-73876891 | Msa0224120:intron | 30.0% | |
| GCTTCAAGTAGAATCAATTA+TGG | - | chr2_1:73876948-73876967 | Msa0224120:intron | 30.0% | |
| TCAAGTAGAATCAATTATGG+AGG | - | chr2_1:73876951-73876970 | Msa0224120:intron | 30.0% | |
| AAGCCAAAATCAATTCTAGA+GGG | + | chr2_1:73877027-73877046 | None:intergenic | 30.0% | |
| !! | TGAATGTTTGGTTCCATTTT+AGG | + | chr2_1:73877052-73877071 | None:intergenic | 30.0% |
| ! | TGAAATAAAGGTGTGCTTTA+TGG | - | chr2_1:73877121-73877140 | Msa0224120:intron | 30.0% |
| AGAGGAATTGATGTATCTAA+AGG | - | chr2_1:73877181-73877200 | Msa0224120:intron | 30.0% | |
| CGACAAATTAAATTAGACAC+AGG | + | chr2_1:73877239-73877258 | None:intergenic | 30.0% | |
| !! | TTAATTTGTCGCTTGTGTAT+TGG | - | chr2_1:73877248-73877267 | Msa0224120:intron | 30.0% |
| TAACTCTTTCTCATTGCTAT+TGG | - | chr2_1:73877406-73877425 | Msa0224120:CDS | 30.0% | |
| ! | TTGTATAAAGTACTTCAAGG+CGG | - | chr2_1:73877480-73877499 | Msa0224120:CDS | 30.0% |
| AGAGTACAATGTTCTTGTAA+TGG | - | chr2_1:73877651-73877670 | Msa0224120:intron | 30.0% | |
| !! | TGTTCTTGTAATGGATTTAC+TGG | - | chr2_1:73877660-73877679 | Msa0224120:intron | 30.0% |
| !! | GTTCTTGTAATGGATTTACT+GGG | - | chr2_1:73877661-73877680 | Msa0224120:intron | 30.0% |
| GTCCCTATGTAAAAATGATT+TGG | + | chr2_1:73877875-73877894 | None:intergenic | 30.0% | |
| ! | GAATCTCTTGTTTACATTGT+TGG | - | chr2_1:73878380-73878399 | Msa0224120:CDS | 30.0% |
| AATCGATTAACTACCAAATG+TGG | - | chr2_1:73878461-73878480 | Msa0224120:intron | 30.0% | |
| TGGATAGTCTAATAACTACA+GGG | - | chr2_1:73878780-73878799 | Msa0224120:intron | 30.0% | |
| AACCATTAGAAGAGATTTAG+AGG | - | chr2_1:73879345-73879364 | Msa0224120:intron | 30.0% | |
| ATCCTCTAAATCTCTTCTAA+TGG | + | chr2_1:73879350-73879369 | None:intergenic | 30.0% | |
| ! | TTTTCGACCTAATATGTGAT+AGG | - | chr2_1:73879374-73879393 | Msa0224120:intron | 30.0% |
| TAATATGTGATAGGACTTTG+CGG | - | chr2_1:73879383-73879402 | Msa0224120:intron | 30.0% | |
| GTAGAAAAAGGCTTATATGT+TGG | - | chr2_1:73879438-73879457 | Msa0224120:intron | 30.0% | |
| ! | AGTTCTTATTCTCTCTGAAA+AGG | + | chr2_1:73879636-73879655 | None:intergenic | 30.0% |
| ATGAATACACATCTTGGAAT+TGG | - | chr2_1:73879682-73879701 | Msa0224120:intron | 30.0% | |
| !! | GTTCTTATGTACTTTTTGAG+AGG | - | chr2_1:73879837-73879856 | Msa0224120:intron | 30.0% |
| !! | TTATGTACTTTTTGAGAGGA+AGG | - | chr2_1:73879841-73879860 | Msa0224120:intron | 30.0% |
| GATAAAACAACATAATGGCA+AGG | + | chr2_1:73879874-73879893 | None:intergenic | 30.0% | |
| GAAAGTTTCTACTTCTATTG+AGG | - | chr2_1:73880010-73880029 | Msa0224120:intron | 30.0% | |
| ! | CTTTTCAGATATGCATAATC+TGG | + | chr2_1:73880198-73880217 | None:intergenic | 30.0% |
| CAGATTATGCATATCTGAAA+AGG | - | chr2_1:73880196-73880215 | Msa0224120:intron | 30.0% | |
| TTAAACCTTCACGAATGAAA+AGG | + | chr2_1:73880233-73880252 | None:intergenic | 30.0% | |
| ! | TAAGGTCTTTGATAACTAGA+TGG | - | chr2_1:73880294-73880313 | Msa0224120:CDS | 30.0% |
| AATCGAAGACATAATCAAAC+TGG | + | chr2_1:73880382-73880401 | None:intergenic | 30.0% | |
| AGTTTGATTATGTCTTCGAT+TGG | - | chr2_1:73880381-73880400 | Msa0224120:intron | 30.0% | |
| AGATTGCTGATACTTCAAAA+TGG | + | chr2_1:73880408-73880427 | None:intergenic | 30.0% | |
| !! | TATATTTACTTTTACGACCC+TGG | - | chr2_1:73880610-73880629 | Msa0224120:CDS | 30.0% |
| ACACCTAAAATAATAGACCA+GGG | + | chr2_1:73880630-73880649 | None:intergenic | 30.0% | |
| TTCTTAGCTTAACAATGTGT+TGG | - | chr2_1:73880663-73880682 | Msa0224120:CDS | 30.0% | |
| TAATGGGGAAATTTCTGTTT+AGG | - | chr2_1:73880815-73880834 | Msa0224120:intron | 30.0% | |
| TAAACAGAAAGTAATGAGGA+AGG | + | chr2_1:73881080-73881099 | None:intergenic | 30.0% | |
| ATCAACGCTGTATTTCAAAA+TGG | - | chr2_1:73881105-73881124 | Msa0224120:intron | 30.0% | |
| CAGAAGAAAAGAAGCAAAAA+AGG | + | chr2_1:73881151-73881170 | None:intergenic | 30.0% | |
| ! | ACTTAGTGTGTTAGTACTTT+TGG | - | chr2_1:73881384-73881403 | Msa0224120:intron | 30.0% |
| ! | CTTAGTGTGTTAGTACTTTT+GGG | - | chr2_1:73881385-73881404 | Msa0224120:intron | 30.0% |
| !! | TGTCTAGTTCTAATTTCTTC+CGG | - | chr2_1:73881555-73881574 | Msa0224120:intron | 30.0% |
| AAATTCACCTATCACATCAT+CGG | - | chr2_1:73881715-73881734 | Msa0224120:intron | 30.0% | |
| CAAAGCTTTACCCATAAAAA+AGG | - | chr2_1:73882028-73882047 | Msa0224120:five_prime_UTR | 30.0% | |
| !!! | ACAGAAGAAGCCTTTTTTAT+GGG | + | chr2_1:73882041-73882060 | None:intergenic | 30.0% |
| !!! | AACAGAAGAAGCCTTTTTTA+TGG | + | chr2_1:73882042-73882061 | None:intergenic | 30.0% |
| !!! | CATCTTTTTTACGTTCAAGT+GGG | - | chr2_1:73882181-73882200 | Msa0224120:five_prime_UTR | 30.0% |
| GAAAAATGAAGAAAAGGCGA+GGG | + | chr2_1:73876321-73876340 | None:intergenic | 35.0% | |
| TGAAAAATGAAGAAAAGGCG+AGG | + | chr2_1:73876322-73876341 | None:intergenic | 35.0% | |
| AGATTGGAAATTGAAGGAGT+TGG | + | chr2_1:73876384-73876403 | None:intergenic | 35.0% | |
| AGAAATTGGGAATTGGAGAT+TGG | + | chr2_1:73876400-73876419 | None:intergenic | 35.0% | |
| ATCTCCAATTCCCAATTTCT+AGG | - | chr2_1:73876400-73876419 | Msa0224120:three_prime_UTR | 35.0% | |
| TCTCCAATTCCCAATTTCTA+GGG | - | chr2_1:73876401-73876420 | Msa0224120:three_prime_UTR | 35.0% | |
| AAACCCTAGAAATTGGGAAT+TGG | + | chr2_1:73876407-73876426 | None:intergenic | 35.0% | |
| !!! | TACCCCTCTAGAATTGATTT+TGG | - | chr2_1:73877021-73877040 | Msa0224120:intron | 35.0% |
| ! | AGCCAAAATCAATTCTAGAG+GGG | + | chr2_1:73877026-73877045 | None:intergenic | 35.0% |
| GAAGCCAAAATCAATTCTAG+AGG | + | chr2_1:73877028-73877047 | None:intergenic | 35.0% | |
| !!! | GATTTTGGCTTCTCCTAAAA+TGG | - | chr2_1:73877036-73877055 | Msa0224120:intron | 35.0% |
| !! | ATGTATCTAAAGGTGCTGAT+AGG | - | chr2_1:73877191-73877210 | Msa0224120:intron | 35.0% |
| !! | TATTGGTTCGACAACTCAAA+AGG | - | chr2_1:73877265-73877284 | Msa0224120:intron | 35.0% |
| !! | ATTGGTTCGACAACTCAAAA+GGG | - | chr2_1:73877266-73877285 | Msa0224120:intron | 35.0% |
| ! | AACAACGACGTTGATTGTTT+AGG | - | chr2_1:73877358-73877377 | Msa0224120:intron | 35.0% |
| ! | TTCTCATTGCTATTGGATTC+AGG | - | chr2_1:73877413-73877432 | Msa0224120:CDS | 35.0% |
| ! | TTTGATTCGTACAACAACTG+AGG | + | chr2_1:73877459-73877478 | None:intergenic | 35.0% |
| GGGTATAAATTCGGTAAGAT+AGG | + | chr2_1:73877515-73877534 | None:intergenic | 35.0% | |
| ! | TCGGATTAAATGTTTTCGGT+TGG | - | chr2_1:73877574-73877593 | Msa0224120:intron | 35.0% |
| !!! | TTCGGTTGGCTACTTTTATA+TGG | - | chr2_1:73877588-73877607 | Msa0224120:intron | 35.0% |
| !! | CAGCATGAGTACAGTTTTAA+GGG | + | chr2_1:73877731-73877750 | None:intergenic | 35.0% |
| AATCCAAGAGATGACAGAAA+GGG | + | chr2_1:73877986-73878005 | None:intergenic | 35.0% | |
| TCGGTCTTGCTAAAAAATAC+AGG | - | chr2_1:73878056-73878075 | Msa0224120:intron | 35.0% | |
| CGGTCTTGCTAAAAAATACA+GGG | - | chr2_1:73878057-73878076 | Msa0224120:intron | 35.0% | |
| AATGGCAGAAAATACCTGTA+AGG | + | chr2_1:73878106-73878125 | None:intergenic | 35.0% | |
| ACTTGCTTCAACATTCAACT+AGG | + | chr2_1:73878162-73878181 | None:intergenic | 35.0% | |
| TGCATGACTTAACTATTCAC+TGG | - | chr2_1:73878269-73878288 | Msa0224120:intron | 35.0% | |
| GCATGACTTAACTATTCACT+GGG | - | chr2_1:73878270-73878289 | Msa0224120:intron | 35.0% | |
| TTAATTCGGGTGATGACATT+AGG | - | chr2_1:73878319-73878338 | Msa0224120:intron | 35.0% | |
| !! | ATTAGGTGGTGCTTTTTGTT+TGG | - | chr2_1:73878336-73878355 | Msa0224120:CDS | 35.0% |
| ! | ATCCTTTTTGTCCCAATTGT+GGG | - | chr2_1:73878583-73878602 | Msa0224120:intron | 35.0% |
| GTGGATAGTCTAATAACTAC+AGG | - | chr2_1:73878779-73878798 | Msa0224120:intron | 35.0% | |
| ATAGTCTAATAACTACAGGG+AGG | - | chr2_1:73878783-73878802 | Msa0224120:intron | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | + | chr2_1:73879010-73879029 | None:intergenic | 35.0% |
| GATTAGAGATCTAGAGATCT+AGG | - | chr2_1:73879089-73879108 | Msa0224120:intron | 35.0% | |
| GCAAAGTCCTATCACATATT+AGG | + | chr2_1:73879384-73879403 | None:intergenic | 35.0% | |
| ! | CATATAAGCCTTTTTCTACC+AGG | + | chr2_1:73879437-73879456 | None:intergenic | 35.0% |
| !! | CACAACTAAGTTGATTACTG+GGG | + | chr2_1:73879583-73879602 | None:intergenic | 35.0% |
| !! | CCACAACTAAGTTGATTACT+GGG | + | chr2_1:73879584-73879603 | None:intergenic | 35.0% |
| CCAGTAATCAACTTAGTTGT+GGG | - | chr2_1:73879582-73879601 | Msa0224120:intron | 35.0% | |
| AGAGAGAATAAGAACTTGAC+AGG | - | chr2_1:73879640-73879659 | Msa0224120:intron | 35.0% | |
| GCTAGTATGAATACACATCT+TGG | - | chr2_1:73879676-73879695 | Msa0224120:intron | 35.0% | |
| CTTGCCTTTGTATCTATTGT+TGG | - | chr2_1:73879734-73879753 | Msa0224120:intron | 35.0% | |
| AACGCCAACAATAGATACAA+AGG | + | chr2_1:73879741-73879760 | None:intergenic | 35.0% | |
| ! | GTCTTTGATAACTAGATGGT+CGG | - | chr2_1:73880298-73880317 | Msa0224120:intron | 35.0% |
| ! | TCTTTGATAACTAGATGGTC+GGG | - | chr2_1:73880299-73880318 | Msa0224120:intron | 35.0% |
| ! | TTGTATTCTTTTGTTGCTGC+AGG | - | chr2_1:73880353-73880372 | Msa0224120:intron | 35.0% |
| TTACTTAAGTGGCATATTGC+AGG | - | chr2_1:73880517-73880536 | Msa0224120:intron | 35.0% | |
| TACTTAAGTGGCATATTGCA+GGG | - | chr2_1:73880518-73880537 | Msa0224120:intron | 35.0% | |
| CACACCTAAAATAATAGACC+AGG | + | chr2_1:73880631-73880650 | None:intergenic | 35.0% | |
| !!! | GGTCTATTATTTTAGGTGTG+TGG | - | chr2_1:73880631-73880650 | Msa0224120:CDS | 35.0% |
| TCTGGACCTATTGTAAATGA+TGG | - | chr2_1:73880896-73880915 | Msa0224120:CDS | 35.0% | |
| TTAGATCCATTTGAGTCACT+TGG | + | chr2_1:73880950-73880969 | None:intergenic | 35.0% | |
| AGAGATAACTTGGTCATAAG+TGG | + | chr2_1:73881005-73881024 | None:intergenic | 35.0% | |
| GCTTTCTACAAGAGATAACT+TGG | + | chr2_1:73881015-73881034 | None:intergenic | 35.0% | |
| ATGTAGCAAATCTGAAGAAG+CGG | + | chr2_1:73881308-73881327 | None:intergenic | 35.0% | |
| !! | AATTTTGAGTCAACTATCCG+AGG | - | chr2_1:73881785-73881804 | Msa0224120:intron | 35.0% |
| ! | GTCTGTTGTTCATTTTGTTG+AGG | - | chr2_1:73881935-73881954 | Msa0224120:five_prime_UTR | 35.0% |
| AAAAAAGATGCTTATGGGGT+TGG | - | chr2_1:73881997-73882016 | Msa0224120:five_prime_UTR | 35.0% | |
| ! | TTTATGGGTAAAGCTTTGTC+AGG | + | chr2_1:73882026-73882045 | None:intergenic | 35.0% |
| TGTATAAAGCTGAAGCTGAA+GGG | + | chr2_1:73882085-73882104 | None:intergenic | 35.0% | |
| TTGTATAAAGCTGAAGCTGA+AGG | + | chr2_1:73882086-73882105 | None:intergenic | 35.0% | |
| CCACTTGAACGTAAAAAAGA+TGG | + | chr2_1:73882183-73882202 | None:intergenic | 35.0% | |
| !!! | CCATCTTTTTTACGTTCAAG+TGG | - | chr2_1:73882180-73882199 | Msa0224120:five_prime_UTR | 35.0% |
| GAGTTGCATGTAGAGATACT+TGG | + | chr2_1:73876089-73876108 | None:intergenic | 40.0% | |
| !! | AAGGAGTTGGTGAAGAGAAA+GGG | + | chr2_1:73876371-73876390 | None:intergenic | 40.0% |
| ! | TAGGTTTTTACCCGATCCAA+TGG | - | chr2_1:73876430-73876449 | Msa0224120:three_prime_UTR | 40.0% |
| AATACGAGGTTCCATTGGAT+CGG | + | chr2_1:73876444-73876463 | None:intergenic | 40.0% | |
| TTACCAATACGAGGTTCCAT+TGG | + | chr2_1:73876449-73876468 | None:intergenic | 40.0% | |
| ! | ATTGGTAACAAGTTCCGTCT+TGG | - | chr2_1:73876461-73876480 | Msa0224120:three_prime_UTR | 40.0% |
| ! | TACCAATTTTGCGACCAAGA+CGG | + | chr2_1:73876478-73876497 | None:intergenic | 40.0% |
| !! | AAAATTGGTAGCGGATCCTT+CGG | - | chr2_1:73876488-73876507 | Msa0224120:exon | 40.0% |
| ! | TTGGTTCGACAACTCAAAAG+GGG | - | chr2_1:73877267-73877286 | Msa0224120:intron | 40.0% |
| CTGAATAAATCCTCGAGACT+TGG | + | chr2_1:73877688-73877707 | None:intergenic | 40.0% | |
| ! | CCAGCATGAGTACAGTTTTA+AGG | + | chr2_1:73877732-73877751 | None:intergenic | 40.0% |
| CCTTAAAACTGTACTCATGC+TGG | - | chr2_1:73877729-73877748 | Msa0224120:intron | 40.0% | |
| GGAAAGAGACGAAGCAATAA+AGG | + | chr2_1:73877775-73877794 | None:intergenic | 40.0% | |
| AAACCAGACAACTTCCTCAT+GGG | - | chr2_1:73877898-73877917 | Msa0224120:CDS | 40.0% | |
| TATCCCTTTCTGTCATCTCT+TGG | - | chr2_1:73877980-73877999 | Msa0224120:intron | 40.0% | |
| CAATCCAAGAGATGACAGAA+AGG | + | chr2_1:73877987-73878006 | None:intergenic | 40.0% | |
| ATGGCATACACCTACAAAAG+AGG | + | chr2_1:73878031-73878050 | None:intergenic | 40.0% | |
| !! | TAGGTGTATGCCATTGACTT+CGG | - | chr2_1:73878037-73878056 | Msa0224120:intron | 40.0% |
| TTTAGCAAGACCGAAGTCAA+TGG | + | chr2_1:73878050-73878069 | None:intergenic | 40.0% | |
| CCTGTAAGGTATATGCTGAT+GGG | + | chr2_1:73878092-73878111 | None:intergenic | 40.0% | |
| ACCTGTAAGGTATATGCTGA+TGG | + | chr2_1:73878093-73878112 | None:intergenic | 40.0% | |
| CTCTGTTACACATCCACATT+TGG | + | chr2_1:73878477-73878496 | None:intergenic | 40.0% | |
| GATGTGTAACAGAGAATTGC+TGG | - | chr2_1:73878483-73878502 | Msa0224120:intron | 40.0% | |
| ! | GATCCTTTTTGTCCCAATTG+TGG | - | chr2_1:73878582-73878601 | Msa0224120:intron | 40.0% |
| AGAAACTAGCACCCACAATT+GGG | + | chr2_1:73878597-73878616 | None:intergenic | 40.0% | |
| TAGAAACTAGCACCCACAAT+TGG | + | chr2_1:73878598-73878617 | None:intergenic | 40.0% | |
| TTTCAACAGAGAAAATGGCG+AGG | - | chr2_1:73878750-73878769 | Msa0224120:intron | 40.0% | |
| AACTGTAGGACTGACAATAG+CGG | - | chr2_1:73878814-73878833 | Msa0224120:intron | 40.0% | |
| GTTTCCGCTTTGACAACTAT+GGG | - | chr2_1:73879319-73879338 | Msa0224120:intron | 40.0% | |
| TTGTCCCATAGTTGTCAAAG+CGG | + | chr2_1:73879326-73879345 | None:intergenic | 40.0% | |
| ! | TTGCGGTGTCAATTGATTCA+TGG | - | chr2_1:73879400-73879419 | Msa0224120:intron | 40.0% |
| ! | CTTTTTCTACCAGGTGAGAT+TGG | + | chr2_1:73879428-73879447 | None:intergenic | 40.0% |
| CAATCTCACCTGGTAGAAAA+AGG | - | chr2_1:73879426-73879445 | Msa0224120:intron | 40.0% | |
| CCCAGTAATCAACTTAGTTG+TGG | - | chr2_1:73879581-73879600 | Msa0224120:intron | 40.0% | |
| !! | CCCACAACTAAGTTGATTAC+TGG | + | chr2_1:73879585-73879604 | None:intergenic | 40.0% |
| AGATACAAAGGCAAGTGAGT+TGG | + | chr2_1:73879729-73879748 | None:intergenic | 40.0% | |
| TTGGCGTTTGATTCTGAACT+TGG | - | chr2_1:73879753-73879772 | Msa0224120:intron | 40.0% | |
| TGGCGTTTGATTCTGAACTT+GGG | - | chr2_1:73879754-73879773 | Msa0224120:intron | 40.0% | |
| ATTTATCAGAGCAAAGCCGT+AGG | - | chr2_1:73879790-73879809 | Msa0224120:intron | 40.0% | |
| TTTATCAGAGCAAAGCCGTA+GGG | - | chr2_1:73879791-73879810 | Msa0224120:intron | 40.0% | |
| ! | AAAGCAAGCCACGCTTTATT+AGG | + | chr2_1:73880092-73880111 | None:intergenic | 40.0% |
| ! | TTTTGTTAGTCCTTGTGTCG+TGG | - | chr2_1:73880111-73880130 | Msa0224120:intron | 40.0% |
| AAGTACGAAGCGAATTCTGA+GGG | + | chr2_1:73880141-73880160 | None:intergenic | 40.0% | |
| CTTCGTACTTCCATTACTGT+CGG | - | chr2_1:73880151-73880170 | Msa0224120:intron | 40.0% | |
| ! | CGACCCTGGTCTATTATTTT+AGG | - | chr2_1:73880624-73880643 | Msa0224120:CDS | 40.0% |
| TGGGGAAATTTCTGTTTAGG+TGG | - | chr2_1:73880818-73880837 | Msa0224120:intron | 40.0% | |
| GGGGAAATTTCTGTTTAGGT+GGG | - | chr2_1:73880819-73880838 | Msa0224120:intron | 40.0% | |
| GGGAAATTTCTGTTTAGGTG+GGG | - | chr2_1:73880820-73880839 | Msa0224120:intron | 40.0% | |
| ! | CTTGTCTAGACAAAAAGCAC+CGG | - | chr2_1:73880922-73880941 | Msa0224120:intron | 40.0% |
| ACAGAAAGTAATGAGGAAGG+TGG | + | chr2_1:73881077-73881096 | None:intergenic | 40.0% | |
| ATTAACCTCGGCAAACACAT+AGG | + | chr2_1:73881421-73881440 | None:intergenic | 40.0% | |
| ! | TTTGAGCACCAGAGGTTTTA+AGG | + | chr2_1:73881694-73881713 | None:intergenic | 40.0% |
| TGAATTTCTTTGAGCACCAG+AGG | + | chr2_1:73881702-73881721 | None:intergenic | 40.0% | |
| CACAAAGCAACAACATCTTC+TGG | - | chr2_1:73881740-73881759 | Msa0224120:intron | 40.0% | |
| AATTCAGGCTCTCAATACCT+CGG | + | chr2_1:73881805-73881824 | None:intergenic | 40.0% | |
| CCTTCTCGTCATTGAAATTC+AGG | + | chr2_1:73881820-73881839 | None:intergenic | 40.0% | |
| CCTGAATTTCAATGACGAGA+AGG | - | chr2_1:73881817-73881836 | Msa0224120:intron | 40.0% | |
| TCTTGATCACCGTATCTTGT+TGG | - | chr2_1:73881861-73881880 | Msa0224120:CDS | 40.0% | |
| ACAACAGACAACAATCCACT+CGG | + | chr2_1:73881924-73881943 | None:intergenic | 40.0% | |
| TGAGGAAAGCTACTACAAGT+TGG | - | chr2_1:73881953-73881972 | Msa0224120:five_prime_UTR | 40.0% | |
| GAGGAAAGCTACTACAAGTT+GGG | - | chr2_1:73881954-73881973 | Msa0224120:five_prime_UTR | 40.0% | |
| GGCTACGTGTTTATTCGAGT+TGG | + | chr2_1:73876111-73876130 | None:intergenic | 45.0% | |
| ACTCGAATAAACACGTAGCC+AGG | - | chr2_1:73876111-73876130 | Msa0224120:three_prime_UTR | 45.0% | |
| AGCAACTAGATCAAACCACC+TGG | + | chr2_1:73876132-73876151 | None:intergenic | 45.0% | |
| TGGTTTGATCTAGTTGCTGC+TGG | - | chr2_1:73876134-73876153 | Msa0224120:three_prime_UTR | 45.0% | |
| GAAAAGGCGAGGGACAAAAT+TGG | + | chr2_1:73876311-73876330 | None:intergenic | 45.0% | |
| TTGGTGAAGAGAAAGGGAAG+GGG | + | chr2_1:73876365-73876384 | None:intergenic | 45.0% | |
| ! | GTTGGTGAAGAGAAAGGGAA+GGG | + | chr2_1:73876366-73876385 | None:intergenic | 45.0% |
| !! | AGTTGGTGAAGAGAAAGGGA+AGG | + | chr2_1:73876367-73876386 | None:intergenic | 45.0% |
| !! | GAAGGAGTTGGTGAAGAGAA+AGG | + | chr2_1:73876372-73876391 | None:intergenic | 45.0% |
| ATACGAGGTTCCATTGGATC+GGG | + | chr2_1:73876443-73876462 | None:intergenic | 45.0% | |
| GATCCAATGGAACCTCGTAT+TGG | - | chr2_1:73876443-73876462 | Msa0224120:three_prime_UTR | 45.0% | |
| !! | CGGAACTTGTTACCAATACG+AGG | + | chr2_1:73876458-73876477 | None:intergenic | 45.0% |
| TTCCGTCTTGGTCGCAAAAT+TGG | - | chr2_1:73876473-73876492 | Msa0224120:three_prime_UTR | 45.0% | |
| CTTGGTCGCAAAATTGGTAG+CGG | - | chr2_1:73876479-73876498 | Msa0224120:three_prime_UTR | 45.0% | |
| GGTGTGCTTTATGGAATGTG+TGG | - | chr2_1:73877130-73877149 | Msa0224120:intron | 45.0% | |
| GTGCTTTATGGAATGTGTGG+TGG | - | chr2_1:73877133-73877152 | Msa0224120:intron | 45.0% | |
| CTGATAGGTGTGTGTGACTA+AGG | - | chr2_1:73877206-73877225 | Msa0224120:intron | 45.0% | |
| !! | GACAACTCAAAAGGGGTGTT+TGG | - | chr2_1:73877274-73877293 | Msa0224120:intron | 45.0% |
| GTACAACAACTGAGGATGCT+TGG | + | chr2_1:73877451-73877470 | None:intergenic | 45.0% | |
| !!! | GGCTACTTTTATATGGCAGC+TGG | - | chr2_1:73877595-73877614 | Msa0224120:intron | 45.0% |
| ATCCCGAATGTGAGATGGTT+TGG | - | chr2_1:73877619-73877638 | Msa0224120:intron | 45.0% | |
| ACGCCAAACCATCTCACATT+CGG | + | chr2_1:73877625-73877644 | None:intergenic | 45.0% | |
| CAAACCAGACAACTTCCTCA+TGG | - | chr2_1:73877897-73877916 | Msa0224120:CDS | 45.0% | |
| ! | AGGTATATGCTGATGGGTAG+AGG | + | chr2_1:73878086-73878105 | None:intergenic | 45.0% |
| CCCATCAGCATATACCTTAC+AGG | - | chr2_1:73878089-73878108 | Msa0224120:intron | 45.0% | |
| ATTCGGGTGATGACATTAGG+TGG | - | chr2_1:73878322-73878341 | Msa0224120:intron | 45.0% | |
| CACCCACAATTGGGACAAAA+AGG | + | chr2_1:73878588-73878607 | None:intergenic | 45.0% | |
| AGAGAAAATGGCGAGGTCTT+AGG | - | chr2_1:73878757-73878776 | Msa0224120:intron | 45.0% | |
| GGGAGGTGAAAGAAAACTGT+AGG | - | chr2_1:73878800-73878819 | Msa0224120:intron | 45.0% | |
| AGGCAAAAGCGGAACAAAAG+CGG | - | chr2_1:73878896-73878915 | Msa0224120:intron | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | + | chr2_1:73879318-73879337 | None:intergenic | 45.0% | |
| CGTTTCCGCTTTGACAACTA+TGG | - | chr2_1:73879318-73879337 | Msa0224120:intron | 45.0% | |
| GGCGTTTGATTCTGAACTTG+GGG | - | chr2_1:73879755-73879774 | Msa0224120:intron | 45.0% | |
| GTGATTCTAAGTCGTCCCTA+CGG | + | chr2_1:73879809-73879828 | None:intergenic | 45.0% | |
| AGGGACGACTTAGAATCACT+TGG | - | chr2_1:73879810-73879829 | Msa0224120:intron | 45.0% | |
| ! | GGTATTTCTACAGCCTTCCA+TGG | - | chr2_1:73879934-73879953 | Msa0224120:intron | 45.0% |
| ! | CTTTTAATCCCTGCCATGGA+AGG | + | chr2_1:73879950-73879969 | None:intergenic | 45.0% |
| AGTACGAAGCGAATTCTGAG+GGG | + | chr2_1:73880140-73880159 | None:intergenic | 45.0% | |
| GAAGTACGAAGCGAATTCTG+AGG | + | chr2_1:73880142-73880161 | None:intergenic | 45.0% | |
| TCCATTACTGTCGGTCATTG+CGG | - | chr2_1:73880160-73880179 | Msa0224120:intron | 45.0% | |
| TTCTGTTTAGGTGGGGAAGA+TGG | - | chr2_1:73880827-73880846 | Msa0224120:intron | 45.0% | |
| AAGATGGTAGACATGCTGGT+TGG | - | chr2_1:73880843-73880862 | Msa0224120:intron | 45.0% | |
| CCATTTGAGTCACTTGGTAC+CGG | + | chr2_1:73880944-73880963 | None:intergenic | 45.0% | |
| CAATTCTGCACAGACACACA+TGG | + | chr2_1:73881206-73881225 | None:intergenic | 45.0% | |
| TATGTCCTATGTGTTTGCCG+AGG | - | chr2_1:73881413-73881432 | Msa0224120:intron | 45.0% | |
| !! | AGGGTATTGTGACAACAAGC+AGG | + | chr2_1:73881471-73881490 | None:intergenic | 45.0% |
| TCTAATTTCTTCCGGCCTAG+TGG | - | chr2_1:73881563-73881582 | Msa0224120:intron | 45.0% | |
| ACTCGTCTTGTAGATCCACT+AGG | + | chr2_1:73881581-73881600 | None:intergenic | 45.0% | |
| AGTGGATCTACAAGACGAGT+AGG | - | chr2_1:73881581-73881600 | Msa0224120:intron | 45.0% | |
| AACAACTGCATCACGACTGT+TGG | + | chr2_1:73881615-73881634 | None:intergenic | 45.0% | |
| TTGTGCTCCGATGATGTGAT+AGG | + | chr2_1:73881725-73881744 | None:intergenic | 45.0% | |
| CAAGATACGGTGATCAAGAG+TGG | + | chr2_1:73881860-73881879 | None:intergenic | 45.0% | |
| !! | AAATTAATTATTTATTTACT+TGG | - | chr2_1:73879913-73879932 | Msa0224120:intron | 5.0% |
| !!! | TTTTAATGTTTTTTTTTTAA+TGG | - | chr2_1:73880764-73880783 | Msa0224120:intron | 5.0% |
| !!! | TTTAATGTTTTTTTTTTAAT+GGG | - | chr2_1:73880765-73880784 | Msa0224120:intron | 5.0% |
| !!! | TTTTTTTTTTGAAAAATTAA+TGG | - | chr2_1:73880798-73880817 | Msa0224120:intron | 5.0% |
| !!! | TTTTTTTTTGAAAAATTAAT+GGG | - | chr2_1:73880799-73880818 | Msa0224120:intron | 5.0% |
| !!! | TTCAAATTTTATTATTTTTT+TGG | + | chr2_1:73882220-73882239 | None:intergenic | 5.0% |
| CGAATAAACACGTAGCCAGG+TGG | - | chr2_1:73876114-73876133 | Msa0224120:three_prime_UTR | 50.0% | |
| AAGGGAAGGGGGAAAAGGAA+CGG | + | chr2_1:73876353-73876372 | None:intergenic | 50.0% | |
| AGAGAAAGGGAAGGGGGAAA+AGG | + | chr2_1:73876358-73876377 | None:intergenic | 50.0% | |
| TGGTGAAGAGAAAGGGAAGG+GGG | + | chr2_1:73876364-73876383 | None:intergenic | 50.0% | |
| TCCTTCGGCGAGATCTATCT+CGG | - | chr2_1:73876503-73876522 | Msa0224120:exon | 50.0% | |
| CTGGTATCCCGAATGTGAGA+TGG | - | chr2_1:73877614-73877633 | Msa0224120:intron | 50.0% | |
| CGCCAAACCATCTCACATTC+GGG | + | chr2_1:73877624-73877643 | None:intergenic | 50.0% | |
| ! | GTGAGATGGTTTGGCGTAGA+AGG | - | chr2_1:73877628-73877647 | Msa0224120:intron | 50.0% |
| TTTACTGGGACCAAGTCTCG+AGG | - | chr2_1:73877675-73877694 | Msa0224120:intron | 50.0% | |
| ! | ACTCATGCTGGCTGATCAGA+TGG | - | chr2_1:73877741-73877760 | Msa0224120:intron | 50.0% |
| ! | ATGCTGGCTGATCAGATGGT+AGG | - | chr2_1:73877745-73877764 | Msa0224120:intron | 50.0% |
| AGACCCATGAGGAAGTTGTC+TGG | + | chr2_1:73877904-73877923 | None:intergenic | 50.0% | |
| AGACAACTTCCTCATGGGTC+TGG | - | chr2_1:73877903-73877922 | Msa0224120:CDS | 50.0% | |
| GACAACTTCCTCATGGGTCT+GGG | - | chr2_1:73877904-73877923 | Msa0224120:CDS | 50.0% | |
| ACAACTTCCTCATGGGTCTG+GGG | - | chr2_1:73877905-73877924 | Msa0224120:CDS | 50.0% | |
| GAAAATGGCGAGGTCTTAGG+TGG | - | chr2_1:73878760-73878779 | Msa0224120:intron | 50.0% | |
| CTGACAATAGCGGTCTAACG+CGG | - | chr2_1:73878824-73878843 | Msa0224120:intron | 50.0% | |
| GGCAAAAGCGGAACAAAAGC+GGG | - | chr2_1:73878897-73878916 | Msa0224120:intron | 50.0% | |
| TTCATGGAGCCAATCTCACC+TGG | - | chr2_1:73879416-73879435 | Msa0224120:intron | 50.0% | |
| TTTCTACAGCCTTCCATGGC+AGG | - | chr2_1:73879938-73879957 | Msa0224120:intron | 50.0% | |
| TTCTACAGCCTTCCATGGCA+GGG | - | chr2_1:73879939-73879958 | Msa0224120:intron | 50.0% | |
| !! | CCTGCTTTTAATCCCTGCCA+TGG | + | chr2_1:73879954-73879973 | None:intergenic | 50.0% |
| CCATGGCAGGGATTAAAAGC+AGG | - | chr2_1:73879951-73879970 | Msa0224120:intron | 50.0% | |
| ACCGCAATGACCGACAGTAA+TGG | + | chr2_1:73880164-73880183 | None:intergenic | 50.0% | |
| ! | CGCGACCTTTTCATTCGTGA+AGG | - | chr2_1:73880225-73880244 | Msa0224120:intron | 50.0% |
| CTTACAATGGCACGTGCAGA+AGG | + | chr2_1:73880443-73880462 | None:intergenic | 50.0% | |
| ! | TCTGCACGTGCCATTGTAAG+TGG | - | chr2_1:73880443-73880462 | Msa0224120:CDS | 50.0% |
| TAGCACACCGCCACTTACAA+TGG | + | chr2_1:73880456-73880475 | None:intergenic | 50.0% | |
| AGTGGCATATTGCAGGGTTC+TGG | - | chr2_1:73880524-73880543 | Msa0224120:intron | 50.0% | |
| ! | ATATTGCAGGGTTCTGGTGC+TGG | - | chr2_1:73880530-73880549 | Msa0224120:intron | 50.0% |
| ! | TATTGCAGGGTTCTGGTGCT+GGG | - | chr2_1:73880531-73880550 | Msa0224120:intron | 50.0% |
| CCAGAGTTTCTTCTACGAGC+AGG | + | chr2_1:73880881-73880900 | None:intergenic | 50.0% | |
| CCTGCTCGTAGAAGAAACTC+TGG | - | chr2_1:73880878-73880897 | Msa0224120:CDS | 50.0% | |
| CCGGTACCAAGTGACTCAAA+TGG | - | chr2_1:73880941-73880960 | Msa0224120:intron | 50.0% | |
| GTCTTGTAGATCCACTAGGC+CGG | + | chr2_1:73881577-73881596 | None:intergenic | 50.0% | |
| !!! | GAGGTTTTAAGGAGTGCTCC+AGG | + | chr2_1:73881683-73881702 | None:intergenic | 50.0% |
| ! | GGAGCACTCCTTAAAACCTC+TGG | - | chr2_1:73881683-73881702 | Msa0224120:intron | 50.0% |
| CTTTCTCACAAACTGCCGAG+TGG | - | chr2_1:73881906-73881925 | Msa0224120:five_prime_UTR | 50.0% | |
| TGGATGCCAAAGCAACCCTG+AGG | - | chr2_1:73876196-73876215 | Msa0224120:three_prime_UTR | 55.0% | |
| GGATGCCAAAGCAACCCTGA+GGG | - | chr2_1:73876197-73876216 | Msa0224120:three_prime_UTR | 55.0% | |
| GATGCCAAAGCAACCCTGAG+GGG | - | chr2_1:73876198-73876217 | Msa0224120:three_prime_UTR | 55.0% | |
| GATTGTCTCTCCTCCCCTCA+GGG | + | chr2_1:73876214-73876233 | None:intergenic | 55.0% | |
| AGATTGTCTCTCCTCCCCTC+AGG | + | chr2_1:73876215-73876234 | None:intergenic | 55.0% | |
| AGGGAAGGGGGAAAAGGAAC+GGG | + | chr2_1:73876352-73876371 | None:intergenic | 55.0% | |
| ACCGAGATAGATCTCGCCGA+AGG | + | chr2_1:73876507-73876526 | None:intergenic | 55.0% | |
| ! | CTTTTGCCTAACGCGCGACT+CGG | + | chr2_1:73878885-73878904 | None:intergenic | 55.0% |
| AGTCGCGCGTTAGGCAAAAG+CGG | - | chr2_1:73878885-73878904 | Msa0224120:intron | 55.0% | |
| GGGCAAAAAGCGGGTCAATG+CGG | - | chr2_1:73878927-73878946 | Msa0224120:intron | 55.0% | |
| GGCAAAAAGCGGGTCAATGC+GGG | - | chr2_1:73878928-73878947 | Msa0224120:intron | 55.0% | |
| GGGTCAATGCGGGCAAAAAG+CGG | - | chr2_1:73878938-73878957 | Msa0224120:intron | 55.0% | |
| GGTCAATGCGGGCAAAAAGC+GGG | - | chr2_1:73878939-73878958 | Msa0224120:intron | 55.0% | |
| ! | TACCGCGCCGCGTCAATTTT+TGG | - | chr2_1:73879277-73879296 | Msa0224120:intron | 55.0% |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | - | chr2_1:73879278-73879297 | Msa0224120:intron | 55.0% |
| GGCCACCCCAAAAATTGACG+CGG | + | chr2_1:73879287-73879306 | None:intergenic | 55.0% | |
| AATGGCACGTGCAGAAGGAG+TGG | + | chr2_1:73880438-73880457 | None:intergenic | 55.0% | |
| ! | GCACGTGCCATTGTAAGTGG+CGG | - | chr2_1:73880446-73880465 | Msa0224120:CDS | 55.0% |
| GTAAGTGGCGGTGTGCTATC+TGG | - | chr2_1:73880458-73880477 | Msa0224120:CDS | 55.0% | |
| GCTGGTGGTAAGCCAGAACT+TGG | + | chr2_1:73880557-73880576 | None:intergenic | 55.0% | |
| TCAGCACTCACAACAGCTGG+TGG | + | chr2_1:73880572-73880591 | None:intergenic | 55.0% | |
| CTCTCAGCACTCACAACAGC+TGG | + | chr2_1:73880575-73880594 | None:intergenic | 55.0% | |
| !! | GTGAGTGCTGAGAGACCATC+AGG | - | chr2_1:73880581-73880600 | Msa0224120:intron | 55.0% |
| GGGGAAGATGGTAGACATGC+TGG | - | chr2_1:73880839-73880858 | Msa0224120:intron | 55.0% | |
| AACCCTCTCTTCCTCTTGCC+AGG | - | chr2_1:73881648-73881667 | Msa0224120:intron | 55.0% | |
| ACCCTCTCTTCCTCTTGCCA+GGG | - | chr2_1:73881649-73881668 | Msa0224120:intron | 55.0% | |
| TCCCTGGCAAGAGGAAGAGA+GGG | + | chr2_1:73881653-73881672 | None:intergenic | 55.0% | |
| ATCCCTGGCAAGAGGAAGAG+AGG | + | chr2_1:73881654-73881673 | None:intergenic | 55.0% | |
| TCTCTTCCTCTTGCCAGGGA+TGG | - | chr2_1:73881653-73881672 | Msa0224120:intron | 55.0% | |
| TCCTCCCCTCAGGGTTGCTT+TGG | + | chr2_1:73876205-73876224 | None:intergenic | 60.0% | |
| ACTTCCTCATGGGTCTGGGG+AGG | - | chr2_1:73877908-73877927 | Msa0224120:CDS | 60.0% | |
| AATAGCGGTCTAACGCGGCG+CGG | - | chr2_1:73878829-73878848 | Msa0224120:intron | 60.0% | |
| GGAACAAAAGCGGGTCAGCG+CGG | - | chr2_1:73878906-73878925 | Msa0224120:intron | 60.0% | |
| GAACAAAAGCGGGTCAGCGC+GGG | - | chr2_1:73878907-73878926 | Msa0224120:intron | 60.0% | |
| GGGCAAAAAGCGGGTCAACG+CGG | - | chr2_1:73878948-73878967 | Msa0224120:intron | 60.0% | |
| GGCAAAAAGCGGGTCAACGC+GGG | - | chr2_1:73878949-73878968 | Msa0224120:intron | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | - | chr2_1:73878959-73878978 | Msa0224120:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | - | chr2_1:73878960-73878979 | Msa0224120:intron | 60.0% | |
| ! | GCGGGCGCTTTTACATGACG+CGG | + | chr2_1:73879245-73879264 | None:intergenic | 60.0% |
| AATTGACGCGGCGCGGTAAG+CGG | + | chr2_1:73879275-73879294 | None:intergenic | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | + | chr2_1:73879282-73879301 | None:intergenic | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr2_1:73879279-73879298 | Msa0224120:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr2_1:73879282-73879301 | Msa0224120:intron | 60.0% |
| TGAGGGGTAGCCACGACACA+AGG | + | chr2_1:73880124-73880143 | None:intergenic | 60.0% | |
| ! | TCTGGTGCTGGGCCAAGTTC+TGG | - | chr2_1:73880542-73880561 | Msa0224120:intron | 60.0% |
| GGACTACCATCCCTGGCAAG+AGG | + | chr2_1:73881662-73881681 | None:intergenic | 60.0% | |
| CTTGCCAGGGATGGTAGTCC+TGG | - | chr2_1:73881662-73881681 | Msa0224120:intron | 60.0% | |
| TGCTCCAGGACTACCATCCC+TGG | + | chr2_1:73881669-73881688 | None:intergenic | 60.0% | |
| GCCAAAGCAACCCTGAGGGG+AGG | - | chr2_1:73876201-73876220 | Msa0224120:three_prime_UTR | 65.0% | |
| GGGTCAGCGCGGGCAAAAAG+CGG | - | chr2_1:73878917-73878936 | Msa0224120:intron | 65.0% | |
| GGTCAGCGCGGGCAAAAAGC+GGG | - | chr2_1:73878918-73878937 | Msa0224120:intron | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | + | chr2_1:73879274-73879293 | None:intergenic | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | + | chr2_1:73879313-73879332 | None:intergenic | 65.0% | |
| CTCGCCTCCCCAGACCCATG+AGG | + | chr2_1:73877915-73877934 | None:intergenic | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | + | chr2_1:73878865-73878884 | None:intergenic | 70.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | - | chr2_1:73878876-73878895 | Msa0224120:intron | 70.0% | |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | + | chr2_1:73879263-73879282 | None:intergenic | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | + | chr2_1:73879264-73879283 | None:intergenic | 80.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | + | chr2_1:73879308-73879327 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73876086 | 73882268 | 73876086 | ID=Msa0224120;Name=Msa0224120 |
| chr2_1 | mRNA | 73876086 | 73882268 | 73876086 | ID=Msa0224120-mRNA-1;Parent=Msa0224120;Name=Msa0224120-mRNA-1;_AED=0.15;_eAED=0.15;_QI=363|1|1|1|1|1|14|418|475 |
| chr2_1 | exon | 73876086 | 73876800 | 73876086 | ID=Msa0224120-mRNA-1:exon:21771;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73877375 | 73877517 | 73877375 | ID=Msa0224120-mRNA-1:exon:21770;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73877752 | 73877815 | 73877752 | ID=Msa0224120-mRNA-1:exon:21769;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73877897 | 73877979 | 73877897 | ID=Msa0224120-mRNA-1:exon:21768;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73878108 | 73878234 | 73878108 | ID=Msa0224120-mRNA-1:exon:21767;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73878323 | 73878407 | 73878323 | ID=Msa0224120-mRNA-1:exon:21766;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73878492 | 73878555 | 73878492 | ID=Msa0224120-mRNA-1:exon:21765;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73878651 | 73878712 | 73878651 | ID=Msa0224120-mRNA-1:exon:21764;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73880244 | 73880314 | 73880244 | ID=Msa0224120-mRNA-1:exon:21763;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73880412 | 73880507 | 73880412 | ID=Msa0224120-mRNA-1:exon:21762;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73880592 | 73880740 | 73880592 | ID=Msa0224120-mRNA-1:exon:21761;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73880850 | 73880919 | 73880850 | ID=Msa0224120-mRNA-1:exon:21760;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73881690 | 73881730 | 73881690 | ID=Msa0224120-mRNA-1:exon:21759;Parent=Msa0224120-mRNA-1 |
| chr2_1 | exon | 73881830 | 73882268 | 73881830 | ID=Msa0224120-mRNA-1:exon:21758;Parent=Msa0224120-mRNA-1 |
| chr2_1 | five_prime_UTR | 73881906 | 73882268 | 73881906 | ID=Msa0224120-mRNA-1:five_prime_utr;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73881830 | 73881905 | 73881830 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73881690 | 73881730 | 73881690 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73880850 | 73880919 | 73880850 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73880592 | 73880740 | 73880592 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73880412 | 73880507 | 73880412 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73880244 | 73880314 | 73880244 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73878651 | 73878712 | 73878651 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73878492 | 73878555 | 73878492 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73878323 | 73878407 | 73878323 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73878108 | 73878234 | 73878108 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73877897 | 73877979 | 73877897 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73877752 | 73877815 | 73877752 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73877375 | 73877517 | 73877375 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | CDS | 73876504 | 73876800 | 73876504 | ID=Msa0224120-mRNA-1:cds;Parent=Msa0224120-mRNA-1 |
| chr2_1 | three_prime_UTR | 73876086 | 73876503 | 73876086 | ID=Msa0224120-mRNA-1:three_prime_utr;Parent=Msa0224120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
