Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265260 | XP_003597565.1 | 99.789 | 475 | 1 | 0 | 1 | 475 | 1 | 475 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265260 | sp|Q9CAI5|CKL2_ARATH | 78.038 | 469 | 98 | 4 | 1 | 468 | 1 | 465 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265260 | G7IS36 | 99.789 | 475 | 1 | 0 | 1 | 475 | 1 | 475 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0224120 | Msa0265260 | 0.974181 | 1.047293e-137 | -8.615850e-47 |
| Msa0265260 | Msa1089200 | 0.984738 | 1.928678e-161 | -8.615850e-47 |
| Msa0265260 | Msa1364090 | 0.980711 | 7.437924e-151 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265260 | MtrunA17_Chr2g0329981 | 99.789 | 475 | 1 | 0 | 1 | 475 | 1 | 475 | 0.0 | 979 |
| Msa0265260 | MtrunA17_Chr8g0342821 | 83.229 | 477 | 75 | 5 | 1 | 475 | 1 | 474 | 0.0 | 808 |
| Msa0265260 | MtrunA17_Chr4g0071031 | 75.681 | 477 | 91 | 5 | 1 | 475 | 1 | 454 | 0.0 | 706 |
| Msa0265260 | MtrunA17_Chr2g0299661 | 69.787 | 470 | 138 | 3 | 1 | 470 | 1 | 466 | 0.0 | 677 |
| Msa0265260 | MtrunA17_Chr1g0183631 | 60.842 | 475 | 156 | 9 | 1 | 468 | 1 | 452 | 0.0 | 554 |
| Msa0265260 | MtrunA17_Chr7g0261501 | 73.639 | 349 | 90 | 1 | 1 | 349 | 1 | 347 | 0.0 | 550 |
| Msa0265260 | MtrunA17_Chr1g0166821 | 74.432 | 352 | 80 | 3 | 1 | 349 | 2 | 346 | 0.0 | 547 |
| Msa0265260 | MtrunA17_Chr1g0187571 | 69.474 | 380 | 109 | 3 | 1 | 380 | 2 | 374 | 0.0 | 536 |
| Msa0265260 | MtrunA17_Chr6g0486611 | 63.007 | 419 | 139 | 7 | 1 | 411 | 1 | 411 | 0.0 | 516 |
| Msa0265260 | MtrunA17_Chr8g0390211 | 63.706 | 394 | 132 | 5 | 1 | 392 | 1 | 385 | 9.63e-180 | 509 |
| Msa0265260 | MtrunA17_Chr3g0140071 | 66.667 | 342 | 107 | 2 | 1 | 342 | 1 | 335 | 4.31e-168 | 480 |
| Msa0265260 | MtrunA17_Chr1g0146151 | 66.972 | 327 | 107 | 1 | 1 | 327 | 1 | 326 | 1.93e-165 | 473 |
| Msa0265260 | MtrunA17_Chr1g0167261 | 69.159 | 321 | 95 | 3 | 1 | 317 | 2 | 322 | 4.99e-164 | 467 |
| Msa0265260 | MtrunA17_Chr7g0214531 | 38.710 | 279 | 154 | 5 | 9 | 273 | 37 | 312 | 5.44e-60 | 207 |
| Msa0265260 | MtrunA17_Chr3g0140431 | 38.828 | 273 | 156 | 5 | 9 | 273 | 38 | 307 | 8.12e-59 | 203 |
| Msa0265260 | MtrunA17_Chr1g0146301 | 38.462 | 273 | 157 | 5 | 9 | 273 | 124 | 393 | 2.99e-58 | 204 |
| Msa0265260 | MtrunA17_Chr1g0213321 | 37.770 | 278 | 161 | 5 | 9 | 277 | 119 | 393 | 1.44e-57 | 201 |
| Msa0265260 | MtrunA17_Chr7g0253211 | 38.062 | 289 | 161 | 6 | 4 | 277 | 317 | 602 | 2.82e-56 | 201 |
| Msa0265260 | MtrunA17_Chr8g0340491 | 36.879 | 282 | 156 | 7 | 9 | 273 | 128 | 404 | 2.97e-52 | 187 |
| Msa0265260 | MtrunA17_Chr5g0405421 | 26.957 | 230 | 151 | 7 | 2 | 223 | 92 | 312 | 4.22e-13 | 71.6 |
| Msa0265260 | MtrunA17_Chr3g0107011 | 27.917 | 240 | 118 | 11 | 1 | 214 | 5 | 215 | 1.35e-11 | 66.6 |
| Msa0265260 | MtrunA17_Chr7g0267751 | 27.602 | 221 | 128 | 9 | 9 | 215 | 135 | 337 | 1.83e-11 | 66.2 |
| Msa0265260 | MtrunA17_Chr7g0272841 | 24.781 | 343 | 186 | 13 | 8 | 324 | 67 | 363 | 2.30e-11 | 66.2 |
| Msa0265260 | MtrunA17_Chr8g0346071 | 30.942 | 223 | 122 | 13 | 4 | 213 | 13 | 216 | 7.08e-11 | 64.3 |
| Msa0265260 | MtrunA17_Chr4g0072831 | 32.258 | 155 | 81 | 7 | 1 | 153 | 2 | 134 | 8.62e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265260 | AT1G72710.1 | 78.038 | 469 | 98 | 4 | 1 | 468 | 1 | 465 | 0.0 | 738 |
| Msa0265260 | AT4G26100.1 | 71.550 | 471 | 109 | 5 | 1 | 471 | 1 | 446 | 0.0 | 677 |
| Msa0265260 | AT5G57015.1 | 69.538 | 476 | 102 | 6 | 1 | 475 | 1 | 434 | 0.0 | 664 |
| Msa0265260 | AT2G19470.1 | 82.569 | 327 | 57 | 0 | 1 | 327 | 1 | 327 | 0.0 | 590 |
| Msa0265260 | AT3G23340.1 | 73.371 | 353 | 83 | 3 | 1 | 349 | 1 | 346 | 0.0 | 545 |
| Msa0265260 | AT5G44100.1 | 81.818 | 297 | 54 | 0 | 1 | 297 | 1 | 297 | 0.0 | 541 |
| Msa0265260 | AT5G44100.2 | 81.818 | 297 | 54 | 0 | 1 | 297 | 1 | 297 | 0.0 | 541 |
| Msa0265260 | AT1G03930.1 | 81.481 | 297 | 55 | 0 | 1 | 297 | 1 | 297 | 0.0 | 541 |
| Msa0265260 | AT4G14340.1 | 65.625 | 416 | 120 | 7 | 1 | 411 | 7 | 404 | 0.0 | 539 |
| Msa0265260 | AT4G28540.1 | 60.131 | 459 | 164 | 6 | 1 | 449 | 5 | 454 | 0.0 | 530 |
| Msa0265260 | AT5G43320.1 | 64.455 | 422 | 119 | 6 | 1 | 406 | 1 | 407 | 0.0 | 530 |
| Msa0265260 | AT1G04440.1 | 70.286 | 350 | 103 | 1 | 1 | 349 | 1 | 350 | 0.0 | 525 |
| Msa0265260 | AT4G14340.2 | 74.775 | 333 | 75 | 3 | 1 | 330 | 7 | 333 | 0.0 | 525 |
| Msa0265260 | AT5G43320.2 | 73.780 | 328 | 84 | 1 | 1 | 328 | 1 | 326 | 0.0 | 513 |
| Msa0265260 | AT5G43320.3 | 73.780 | 328 | 84 | 1 | 1 | 328 | 1 | 326 | 0.0 | 513 |
| Msa0265260 | AT3G23340.2 | 72.973 | 333 | 79 | 3 | 21 | 349 | 7 | 332 | 3.78e-180 | 511 |
| Msa0265260 | AT4G28860.2 | 68.272 | 353 | 106 | 4 | 1 | 352 | 1 | 348 | 4.55e-178 | 504 |
| Msa0265260 | AT4G28880.3 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0265260 | AT4G28880.2 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0265260 | AT4G28880.1 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0265260 | AT4G28880.4 | 72.611 | 314 | 86 | 0 | 1 | 314 | 1 | 314 | 4.98e-178 | 505 |
| Msa0265260 | AT4G28860.1 | 74.351 | 308 | 79 | 0 | 1 | 308 | 1 | 308 | 1.14e-177 | 504 |
| Msa0265260 | AT4G08800.1 | 70.164 | 305 | 59 | 2 | 1 | 305 | 1 | 273 | 3.36e-158 | 450 |
| Msa0265260 | AT2G25760.2 | 39.721 | 287 | 156 | 5 | 4 | 273 | 100 | 386 | 1.46e-63 | 218 |
| Msa0265260 | AT2G25760.1 | 39.024 | 287 | 155 | 6 | 4 | 273 | 100 | 383 | 1.72e-60 | 210 |
| Msa0265260 | AT3G03940.1 | 37.716 | 289 | 162 | 6 | 4 | 277 | 133 | 418 | 4.10e-57 | 201 |
| Msa0265260 | AT5G18190.2 | 37.370 | 289 | 163 | 6 | 4 | 277 | 123 | 408 | 1.54e-56 | 199 |
| Msa0265260 | AT5G18190.1 | 37.370 | 289 | 163 | 6 | 4 | 277 | 123 | 408 | 1.54e-56 | 199 |
| Msa0265260 | AT3G13670.1 | 36.396 | 283 | 163 | 5 | 9 | 277 | 137 | 416 | 9.09e-56 | 197 |
| Msa0265260 | AT2G17890.1 | 26.667 | 225 | 148 | 8 | 7 | 223 | 106 | 321 | 5.02e-13 | 71.6 |
| Msa0265260 | AT3G06030.1 | 28.054 | 221 | 130 | 8 | 8 | 213 | 67 | 273 | 3.10e-12 | 69.3 |
| Msa0265260 | AT3G50530.1 | 26.271 | 236 | 133 | 10 | 5 | 219 | 144 | 359 | 1.09e-11 | 67.4 |
| Msa0265260 | AT4G36070.1 | 26.244 | 221 | 146 | 7 | 7 | 219 | 69 | 280 | 1.29e-11 | 67.0 |
| Msa0265260 | AT4G36070.2 | 26.244 | 221 | 146 | 7 | 7 | 219 | 69 | 280 | 1.41e-11 | 67.0 |
| Msa0265260 | AT5G21326.1 | 27.311 | 238 | 121 | 11 | 1 | 214 | 6 | 215 | 1.93e-11 | 66.2 |
| Msa0265260 | AT1G09000.1 | 27.313 | 227 | 136 | 8 | 1 | 213 | 63 | 274 | 2.24e-11 | 66.6 |
| Msa0265260 | AT1G09000.2 | 27.313 | 227 | 136 | 8 | 1 | 213 | 63 | 274 | 2.69e-11 | 66.2 |
Find 150 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATAAAACCCTAGAAAT+TGG | 0.164625 | 2_2:+65491797 | None:intergenic |
| TCTGGTGCTGGGCCAAGTTC+TGG | 0.217410 | 2_2:-65487656 | Msa0265260:CDS |
| TGTTCTTGTAATGGATTTAC+TGG | 0.238900 | 2_2:-65490535 | Msa0265260:CDS |
| ATCTCCAATTCCCAATTTCT+AGG | 0.245279 | 2_2:-65491808 | Msa0265260:five_prime_UTR |
| ATATTGCAGGGTTCTGGTGC+TGG | 0.265600 | 2_2:-65487668 | Msa0265260:intron |
| CCTTCTCGTCATTGAAATTC+AGG | 0.271965 | 2_2:+65486381 | None:intergenic |
| TTCCGTCTTGGTCGCAAAAT+TGG | 0.279587 | 2_2:-65491735 | Msa0265260:CDS |
| TCCTCCCCTCAGGGTTGCTT+TGG | 0.290501 | 2_2:+65492002 | None:intergenic |
| GAAAACAAATTACGTTTGTT+TGG | 0.300456 | 2_2:-65492028 | Msa0265260:five_prime_UTR |
| AGTGGCATATTGCAGGGTTC+TGG | 0.307259 | 2_2:-65487674 | Msa0265260:intron |
| GTGAGATGGTTTGGCGTAGA+AGG | 0.320994 | 2_2:-65490567 | Msa0265260:CDS |
| CCCATCAGCATATACCTTAC+AGG | 0.322211 | 2_2:-65490106 | Msa0265260:intron |
| ATATTCATTCTTATCTTTAG+AGG | 0.335491 | 2_2:-65486050 | Msa0265260:three_prime_UTR |
| TGTCTAGTTCTAATTTCTTC+CGG | 0.335964 | 2_2:-65486643 | Msa0265260:CDS |
| AACCCTCTCTTCCTCTTGCC+AGG | 0.341730 | 2_2:-65486550 | Msa0265260:CDS |
| GAAAAGGCGAGGGACAAAAT+TGG | 0.377134 | 2_2:+65491900 | None:intergenic |
| CGCCAAACCATCTCACATTC+GGG | 0.397128 | 2_2:+65490574 | None:intergenic |
| AAGTTTCCATCATTTACAAT+AGG | 0.399390 | 2_2:+65487296 | None:intergenic |
| TGGTTTGATCTAGTTGCTGC+TGG | 0.401251 | 2_2:-65492070 | Msa0265260:five_prime_UTR |
| ATGAATACACATCTTGGAAT+TGG | 0.405893 | 2_2:-65488518 | Msa0265260:intron |
| AATCGAAGACATAATCAAAC+TGG | 0.405895 | 2_2:+65487819 | None:intergenic |
| AAACCCTAGAAATTGGGAAT+TGG | 0.406920 | 2_2:+65491804 | None:intergenic |
| CTTGCCAGGGATGGTAGTCC+TGG | 0.411315 | 2_2:-65486536 | Msa0265260:CDS |
| AGAAATTGGGAATTGGAGAT+TGG | 0.411923 | 2_2:+65491811 | None:intergenic |
| AGATTGCTGATACTTCAAAA+TGG | 0.414687 | 2_2:+65487793 | None:intergenic |
| AGACAACTTCCTCATGGGTC+TGG | 0.419334 | 2_2:-65490292 | Msa0265260:CDS |
| AGATTGTCTCTCCTCCCCTC+AGG | 0.425290 | 2_2:+65491992 | None:intergenic |
| CTAATAAAACCCTAGAAATT+GGG | 0.429752 | 2_2:+65491798 | None:intergenic |
| CACAAAGCAACAACATCTTC+TGG | 0.430594 | 2_2:-65486458 | Msa0265260:CDS |
| TATTGCAGGGTTCTGGTGCT+GGG | 0.431101 | 2_2:-65487667 | Msa0265260:intron |
| ACGCCAAACCATCTCACATT+CGG | 0.433060 | 2_2:+65490573 | None:intergenic |
| TTCTGTTTAGGTGGGGAAGA+TGG | 0.440368 | 2_2:-65487371 | Msa0265260:intron |
| AGAGTACAATGTTCTTGTAA+TGG | 0.440882 | 2_2:-65490544 | Msa0265260:CDS |
| CAGATTATGCATATCTGAAA+AGG | 0.441444 | 2_2:-65488002 | Msa0265260:CDS |
| TTTATGGGTAAAGCTTTGTC+AGG | 0.442027 | 2_2:+65486175 | None:intergenic |
| GAAGGAGTTGGTGAAGAGAA+AGG | 0.444415 | 2_2:+65491839 | None:intergenic |
| CTGAATAAATCCTCGAGACT+TGG | 0.445414 | 2_2:+65490510 | None:intergenic |
| TTTCTACAGCCTTCCATGGC+AGG | 0.446289 | 2_2:-65488260 | Msa0265260:intron |
| TCTTGATCACCGTATCTTGT+TGG | 0.448965 | 2_2:-65486337 | Msa0265260:three_prime_UTR |
| GAAAGTTTCTACTTCTATTG+AGG | 0.449245 | 2_2:-65488188 | Msa0265260:intron |
| GACAACTTCCTCATGGGTCT+GGG | 0.451955 | 2_2:-65490291 | Msa0265260:CDS |
| GCTAGTATGAATACACATCT+TGG | 0.455950 | 2_2:-65488524 | Msa0265260:CDS |
| AAATGGATCTAAAGAAGTTA+TGG | 0.456366 | 2_2:-65487240 | Msa0265260:intron |
| TCTGGACCTATTGTAAATGA+TGG | 0.460186 | 2_2:-65487302 | Msa0265260:CDS |
| AGTTTGATTATGTCTTCGAT+TGG | 0.464178 | 2_2:-65487817 | Msa0265260:CDS |
| AAGGAGTTGGTGAAGAGAAA+GGG | 0.465579 | 2_2:+65491840 | None:intergenic |
| ATCCCGAATGTGAGATGGTT+TGG | 0.467028 | 2_2:-65490576 | Msa0265260:CDS |
| AGAGAGAATAAGAACTTGAC+AGG | 0.470574 | 2_2:-65488560 | Msa0265260:CDS |
| AACAACTGCATCACGACTGT+TGG | 0.471395 | 2_2:+65486586 | None:intergenic |
| GATCCAATGGAACCTCGTAT+TGG | 0.480777 | 2_2:-65491765 | Msa0265260:exon |
| AATTGGAGATTGGAAATTGA+AGG | 0.482525 | 2_2:+65491821 | None:intergenic |
| CTCTCAGCACTCACAACAGC+TGG | 0.493489 | 2_2:+65487626 | None:intergenic |
| ACCTGTAAGGTATATGCTGA+TGG | 0.497924 | 2_2:+65490105 | None:intergenic |
| TCTCCAATTCCCAATTTCTA+GGG | 0.498461 | 2_2:-65491807 | Msa0265260:five_prime_UTR |
| TTACCAATACGAGGTTCCAT+TGG | 0.498879 | 2_2:+65491762 | None:intergenic |
| GGCTACGTGTTTATTCGAGT+TGG | 0.499829 | 2_2:+65492096 | None:intergenic |
| ACCCTCTCTTCCTCTTGCCA+GGG | 0.500811 | 2_2:-65486549 | Msa0265260:CDS |
| GTACAACAACTGAGGATGCT+TGG | 0.501916 | 2_2:+65490747 | None:intergenic |
| TTTAGCAAGACCGAAGTCAA+TGG | 0.503927 | 2_2:+65490148 | None:intergenic |
| GGAGCACTCCTTAAAACCTC+TGG | 0.508111 | 2_2:-65486515 | Msa0265260:CDS |
| GAGGAAAGCTACTACAAGTT+GGG | 0.512386 | 2_2:-65486244 | Msa0265260:three_prime_UTR |
| AGACCCATGAGGAAGTTGTC+TGG | 0.513231 | 2_2:+65490294 | None:intergenic |
| TCTCTTCCTCTTGCCAGGGA+TGG | 0.513542 | 2_2:-65486545 | Msa0265260:CDS |
| AAAATTGGTAGCGGATCCTT+CGG | 0.514691 | 2_2:-65491720 | Msa0265260:CDS |
| CCAGAGTTTCTTCTACGAGC+AGG | 0.515799 | 2_2:+65487320 | None:intergenic |
| GTTGGTGAAGAGAAAGGGAA+GGG | 0.515890 | 2_2:+65491845 | None:intergenic |
| AATGGCAGAAAATACCTGTA+AGG | 0.515910 | 2_2:+65490092 | None:intergenic |
| CCATTTGAGTCACTTGGTAC+CGG | 0.517246 | 2_2:+65487257 | None:intergenic |
| TTGGTGAAGAGAAAGGGAAG+GGG | 0.518174 | 2_2:+65491846 | None:intergenic |
| TGGTGAAGAGAAAGGGAAGG+GGG | 0.518932 | 2_2:+65491847 | None:intergenic |
| GAGTTGCATGTAGAGATACT+TGG | 0.520768 | 2_2:+65492118 | None:intergenic |
| TTAAACCTTCACGAATGAAA+AGG | 0.521136 | 2_2:+65487968 | None:intergenic |
| TATTCATTCTTATCTTTAGA+GGG | 0.522333 | 2_2:-65486049 | Msa0265260:three_prime_UTR |
| GCTGGTGGTAAGCCAGAACT+TGG | 0.528434 | 2_2:+65487644 | None:intergenic |
| ATACGAGGTTCCATTGGATC+GGG | 0.530519 | 2_2:+65491768 | None:intergenic |
| TTAGATCCATTTGAGTCACT+TGG | 0.530625 | 2_2:+65487251 | None:intergenic |
| CCGGTACCAAGTGACTCAAA+TGG | 0.531968 | 2_2:-65487257 | Msa0265260:CDS |
| TGAGGAAAGCTACTACAAGT+TGG | 0.532375 | 2_2:-65486245 | Msa0265260:three_prime_UTR |
| ACTCGAATAAACACGTAGCC+AGG | 0.534403 | 2_2:-65492093 | Msa0265260:five_prime_UTR |
| GTGAGTGCTGAGAGACCATC+AGG | 0.536378 | 2_2:-65487617 | Msa0265260:intron |
| TTGTATAAAGCTGAAGCTGA+AGG | 0.536566 | 2_2:+65486115 | None:intergenic |
| AAGTTGTATAAAGTACTTCA+AGG | 0.537249 | 2_2:-65490718 | Msa0265260:CDS |
| TTGTGCTCCGATGATGTGAT+AGG | 0.538146 | 2_2:+65486476 | None:intergenic |
| GGGGAAGATGGTAGACATGC+TGG | 0.538151 | 2_2:-65487359 | Msa0265260:CDS |
| ATTGGTAACAAGTTCCGTCT+TGG | 0.539261 | 2_2:-65491747 | Msa0265260:CDS |
| TAGGTGTATGCCATTGACTT+CGG | 0.549001 | 2_2:-65490158 | Msa0265260:CDS |
| TCTAATTTCTTCCGGCCTAG+TGG | 0.549750 | 2_2:-65486635 | Msa0265260:CDS |
| CCTTAAAACTGTACTCATGC+TGG | 0.552041 | 2_2:-65490466 | Msa0265260:CDS |
| CAAACCAGACAACTTCCTCA+TGG | 0.552695 | 2_2:-65490298 | Msa0265260:CDS |
| GATTGTCTCTCCTCCCCTCA+GGG | 0.553551 | 2_2:+65491993 | None:intergenic |
| TCCATTACTGTCGGTCATTG+CGG | 0.553748 | 2_2:-65488038 | Msa0265260:CDS |
| TTCTACAGCCTTCCATGGCA+GGG | 0.557366 | 2_2:-65488259 | Msa0265260:intron |
| TGCTCCAGGACTACCATCCC+TGG | 0.557499 | 2_2:+65486532 | None:intergenic |
| AGGTATATGCTGATGGGTAG+AGG | 0.560253 | 2_2:+65490112 | None:intergenic |
| AGTTGGTGAAGAGAAAGGGA+AGG | 0.564963 | 2_2:+65491844 | None:intergenic |
| AGATTGGAAATTGAAGGAGT+TGG | 0.567018 | 2_2:+65491827 | None:intergenic |
| AATACGAGGTTCCATTGGAT+CGG | 0.571470 | 2_2:+65491767 | None:intergenic |
| TGAATTTCTTTGAGCACCAG+AGG | 0.572897 | 2_2:+65486499 | None:intergenic |
| CTTACAATGGCACGTGCAGA+AGG | 0.576744 | 2_2:+65487758 | None:intergenic |
| ACCGCAATGACCGACAGTAA+TGG | 0.577382 | 2_2:+65488037 | None:intergenic |
| AAGTACGAAGCGAATTCTGA+GGG | 0.578038 | 2_2:+65488060 | None:intergenic |
| ACAACTTCCTCATGGGTCTG+GGG | 0.578843 | 2_2:-65490290 | Msa0265260:CDS |
| CCATGGCAGGGATTAAAAGC+AGG | 0.580774 | 2_2:-65488247 | Msa0265260:CDS |
| CTTCGTACTTCCATTACTGT+CGG | 0.580895 | 2_2:-65488047 | Msa0265260:CDS |
| CCTGTAAGGTATATGCTGAT+GGG | 0.582308 | 2_2:+65490106 | None:intergenic |
| CCTGCTCGTAGAAGAAACTC+TGG | 0.583504 | 2_2:-65487320 | Msa0265260:CDS |
| GGTATTTCTACAGCCTTCCA+TGG | 0.584276 | 2_2:-65488264 | Msa0265260:intron |
| AAACCAGACAACTTCCTCAT+GGG | 0.585296 | 2_2:-65490297 | Msa0265260:CDS |
| GTGATTCTAAGTCGTCCCTA+CGG | 0.586077 | 2_2:+65488392 | None:intergenic |
| CTGGTATCCCGAATGTGAGA+TGG | 0.591046 | 2_2:-65490581 | Msa0265260:CDS |
| GTCTTGTAGATCCACTAGGC+CGG | 0.591531 | 2_2:+65486624 | None:intergenic |
| TCCTTCGGCGAGATCTATCT+CGG | 0.591939 | 2_2:-65491705 | Msa0265260:intron |
| TGTATAAAGCTGAAGCTGAA+GGG | 0.592495 | 2_2:+65486116 | None:intergenic |
| ATCCCTGGCAAGAGGAAGAG+AGG | 0.593199 | 2_2:+65486547 | None:intergenic |
| GTTCTTGTAATGGATTTACT+GGG | 0.597182 | 2_2:-65490534 | Msa0265260:CDS |
| ACTCATGCTGGCTGATCAGA+TGG | 0.600494 | 2_2:-65490454 | Msa0265260:intron |
| TTTATCAGAGCAAAGCCGTA+GGG | 0.600968 | 2_2:-65488407 | Msa0265260:intron |
| AAATTCACCTATCACATCAT+CGG | 0.605560 | 2_2:-65486483 | Msa0265260:CDS |
| AATGGCACGTGCAGAAGGAG+TGG | 0.609634 | 2_2:+65487763 | None:intergenic |
| AAATATTCAGACAAATGAAG+AGG | 0.611556 | 2_2:-65491577 | Msa0265260:CDS |
| TGAGGGGTAGCCACGACACA+AGG | 0.615164 | 2_2:+65488077 | None:intergenic |
| GCCAAAGCAACCCTGAGGGG+AGG | 0.618002 | 2_2:-65492003 | Msa0265260:five_prime_UTR |
| CTTGGTCGCAAAATTGGTAG+CGG | 0.618071 | 2_2:-65491729 | Msa0265260:CDS |
| CCTGAATTTCAATGACGAGA+AGG | 0.618175 | 2_2:-65486381 | Msa0265260:CDS |
| GGACTACCATCCCTGGCAAG+AGG | 0.621909 | 2_2:+65486539 | None:intergenic |
| GAAGTACGAAGCGAATTCTG+AGG | 0.623073 | 2_2:+65488059 | None:intergenic |
| CAAGATACGGTGATCAAGAG+TGG | 0.624843 | 2_2:+65486341 | None:intergenic |
| ATTTATCAGAGCAAAGCCGT+AGG | 0.626916 | 2_2:-65488408 | Msa0265260:intron |
| TCCCTGGCAAGAGGAAGAGA+GGG | 0.628185 | 2_2:+65486548 | None:intergenic |
| TCAGCACTCACAACAGCTGG+TGG | 0.637376 | 2_2:+65487629 | None:intergenic |
| GGATGCCAAAGCAACCCTGA+GGG | 0.640195 | 2_2:-65492007 | Msa0265260:five_prime_UTR |
| CGGAACTTGTTACCAATACG+AGG | 0.640695 | 2_2:+65491753 | None:intergenic |
| AATTCAGGCTCTCAATACCT+CGG | 0.640782 | 2_2:+65486396 | None:intergenic |
| ACTTCCTCATGGGTCTGGGG+AGG | 0.643093 | 2_2:-65490287 | Msa0265260:CDS |
| ACTCGTCTTGTAGATCCACT+AGG | 0.645996 | 2_2:+65486620 | None:intergenic |
| AGTGGATCTACAAGACGAGT+AGG | 0.648511 | 2_2:-65486617 | Msa0265260:CDS |
| TTTACTGGGACCAAGTCTCG+AGG | 0.649748 | 2_2:-65490520 | Msa0265260:CDS |
| CTTTCTCACAAACTGCCGAG+TGG | 0.656272 | 2_2:-65486292 | Msa0265260:three_prime_UTR |
| AAGATGGTAGACATGCTGGT+TGG | 0.660444 | 2_2:-65487355 | Msa0265260:CDS |
| ACCGAGATAGATCTCGCCGA+AGG | 0.660795 | 2_2:+65491704 | None:intergenic |
| AGGGACGACTTAGAATCACT+TGG | 0.661964 | 2_2:-65488388 | Msa0265260:CDS |
| AGCAACTAGATCAAACCACC+TGG | 0.668663 | 2_2:+65492075 | None:intergenic |
| TTTGATTCGTACAACAACTG+AGG | 0.675406 | 2_2:+65490739 | None:intergenic |
| ACAACAGACAACAATCCACT+CGG | 0.678434 | 2_2:+65486277 | None:intergenic |
| TGGATGCCAAAGCAACCCTG+AGG | 0.691305 | 2_2:-65492008 | Msa0265260:five_prime_UTR |
| GATGCCAAAGCAACCCTGAG+GGG | 0.694229 | 2_2:-65492006 | Msa0265260:five_prime_UTR |
| CGAATAAACACGTAGCCAGG+TGG | 0.702448 | 2_2:-65492090 | Msa0265260:five_prime_UTR |
| CTCGCCTCCCCAGACCCATG+AGG | 0.716204 | 2_2:+65490283 | None:intergenic |
| TTGTATAAAGTACTTCAAGG+CGG | 0.746900 | 2_2:-65490715 | Msa0265260:CDS |
| AGTACGAAGCGAATTCTGAG+GGG | 0.755113 | 2_2:+65488061 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATATTATTAATTA+AGG | + | chr2_2:65489082-65489101 | None:intergenic | 0.0% |
| !! | GAAAATAATAATAATAATGA+TGG | + | chr2_2:65486420-65486439 | None:intergenic | 10.0% |
| !!! | TTTAATTAATTTGAAAATTC+AGG | - | chr2_2:65486468-65486487 | Msa0265260:CDS | 10.0% |
| !!! | TGTATTTTAAAATATTGTTT+TGG | - | chr2_2:65489912-65489931 | Msa0265260:intron | 10.0% |
| !!! | TTTTACTTTTGAAATTATTA+AGG | - | chr2_2:65490149-65490168 | Msa0265260:CDS | 10.0% |
| !!! | TTAATGTTTTTTTTTTAATG+GGG | - | chr2_2:65490639-65490658 | Msa0265260:intron | 10.0% |
| !!! | TTTTTTTTGAAAAATTAATG+GGG | - | chr2_2:65490673-65490692 | Msa0265260:intron | 10.0% |
| !!! | CTTCAAATTTTATTATTTTT+TGG | + | chr2_2:65492093-65492112 | None:intergenic | 10.0% |
| !! | GATTTAGGTAAATAAAAAAT+AGG | + | chr2_2:65487672-65487691 | None:intergenic | 15.0% |
| !! | TATTTACCTAAATCTTAATA+TGG | - | chr2_2:65487678-65487697 | Msa0265260:intron | 15.0% |
| !! | ATTTACCTAAATCTTAATAT+GGG | - | chr2_2:65487679-65487698 | Msa0265260:intron | 15.0% |
| !! | TCACAAAAACTAAATAAAAA+TGG | + | chr2_2:65488000-65488019 | None:intergenic | 15.0% |
| !!! | TTTTAACTATATGAAATTAG+AGG | - | chr2_2:65488057-65488076 | Msa0265260:CDS | 15.0% |
| !!! | TAAAAGTATTAGCTTTAATT+CGG | - | chr2_2:65488181-65488200 | Msa0265260:intron | 15.0% |
| !! | AATCAATAGAAAGAAAATTA+AGG | - | chr2_2:65488599-65488618 | Msa0265260:intron | 15.0% |
| !!! | TTCATTTTGACTTAAAAAAA+AGG | + | chr2_2:65488915-65488934 | None:intergenic | 15.0% |
| !! | ATATAAATAAGAAAACAAAG+AGG | + | chr2_2:65490130-65490149 | None:intergenic | 15.0% |
| !! | AAAAGTTATATATCATTCTT+TGG | - | chr2_2:65491152-65491171 | Msa0265260:intron | 15.0% |
| !! | TATATAAAAAAGATGCTTAT+GGG | - | chr2_2:65491865-65491884 | Msa0265260:five_prime_UTR | 15.0% |
| !! | AAAAAGAATGAAAATAAAAG+AGG | + | chr2_2:65491987-65492006 | None:intergenic | 15.0% |
| !!! | TATTTTCATTCTTTTTTTGT+TGG | - | chr2_2:65491991-65492010 | Msa0265260:five_prime_UTR | 15.0% |
| !!! | ATATTGTAAGGGTATAAATT+CGG | + | chr2_2:65487400-65487419 | None:intergenic | 20.0% |
| !! | AGTAAACTAAGATATTGTAA+GGG | + | chr2_2:65487411-65487430 | None:intergenic | 20.0% |
| !! | AAGTAAACTAAGATATTGTA+AGG | + | chr2_2:65487412-65487431 | None:intergenic | 20.0% |
| !!! | ATTTATTCAGTTTTTGTAGT+CGG | - | chr2_2:65487574-65487593 | Msa0265260:intron | 20.0% |
| !! | TTTACCTAAATCTTAATATG+GGG | - | chr2_2:65487680-65487699 | Msa0265260:intron | 20.0% |
| !!! | ATTCCAAATCATTTTTACAT+AGG | - | chr2_2:65487745-65487764 | Msa0265260:intron | 20.0% |
| !!! | TTCCAAATCATTTTTACATA+GGG | - | chr2_2:65487746-65487765 | Msa0265260:intron | 20.0% |
| !!! | TTTTGTGAATTTATGTGTAA+TGG | - | chr2_2:65488012-65488031 | Msa0265260:CDS | 20.0% |
| !! | ATATGAAATTAGAGGAAATT+AGG | - | chr2_2:65488065-65488084 | Msa0265260:CDS | 20.0% |
| !!! | AAAAGTATTAGCTTTAATTC+GGG | - | chr2_2:65488182-65488201 | Msa0265260:intron | 20.0% |
| !!! | ATATAACTTGTTACTATAGT+GGG | + | chr2_2:65488399-65488418 | None:intergenic | 20.0% |
| !! | GTAACAAGTTATATGAAAAT+TGG | - | chr2_2:65488405-65488424 | Msa0265260:intron | 20.0% |
| !!! | TAATTTAAAAGCAGTTGATA+AGG | + | chr2_2:65489772-65489791 | None:intergenic | 20.0% |
| !! | GTAAATATAATTATACCTGA+TGG | + | chr2_2:65490472-65490491 | None:intergenic | 20.0% |
| !! | CAACTAGATTTATAAAGTAT+TGG | - | chr2_2:65491047-65491066 | Msa0265260:intron | 20.0% |
| !!! | TCATGTTATTTTTGACATTT+TGG | - | chr2_2:65491388-65491407 | Msa0265260:intron | 20.0% |
| !!! | AAAATTTTACCAACAAGATA+CGG | + | chr2_2:65491746-65491765 | None:intergenic | 20.0% |
| !! | GTATATAAAAAAGATGCTTA+TGG | - | chr2_2:65491864-65491883 | Msa0265260:five_prime_UTR | 20.0% |
| !! | ATATAAAAAAGATGCTTATG+GGG | - | chr2_2:65491866-65491885 | Msa0265260:five_prime_UTR | 20.0% |
| !! | ATATTCATTCTTATCTTTAG+AGG | - | chr2_2:65492021-65492040 | Msa0265260:five_prime_UTR | 20.0% |
| !! | TATTCATTCTTATCTTTAGA+GGG | - | chr2_2:65492022-65492041 | Msa0265260:five_prime_UTR | 20.0% |
| ! | GAAAACAAATTACGTTTGTT+TGG | - | chr2_2:65486043-65486062 | Msa0265260:three_prime_UTR | 25.0% |
| ! | AGAAGTGAAAAATGAAGAAA+AGG | + | chr2_2:65486190-65486209 | None:intergenic | 25.0% |
| ! | CTAATAAAACCCTAGAAATT+GGG | + | chr2_2:65486276-65486295 | None:intergenic | 25.0% |
| !!! | ATGATGGATTGAAAAATTGA+AGG | + | chr2_2:65486404-65486423 | None:intergenic | 25.0% |
| ! | AAATATTCAGACAAATGAAG+AGG | - | chr2_2:65486494-65486513 | Msa0265260:CDS | 25.0% |
| !!! | GAAAATCGAAAGTTTTGTTT+TGG | + | chr2_2:65486566-65486585 | None:intergenic | 25.0% |
| ! | TTTATGTGTATGTGTATGTT+TGG | - | chr2_2:65486663-65486682 | Msa0265260:intron | 25.0% |
| !! | TATGTAAAGTGATTTGTGTT+TGG | - | chr2_2:65486723-65486742 | Msa0265260:intron | 25.0% |
| ! | AACAAAACTACATGAATGTT+TGG | + | chr2_2:65486940-65486959 | None:intergenic | 25.0% |
| ! | AGTGTGCAAAATTGAAATAA+AGG | - | chr2_2:65486985-65487004 | Msa0265260:intron | 25.0% |
| !!! | TTTTGTTTGAACTTTTGTAG+AGG | - | chr2_2:65487039-65487058 | Msa0265260:intron | 25.0% |
| !! | AAGTTGTATAAAGTACTTCA+AGG | - | chr2_2:65487353-65487372 | Msa0265260:CDS | 25.0% |
| ! | TCATTAGACTTCATATTACT+CGG | - | chr2_2:65487431-65487450 | Msa0265260:intron | 25.0% |
| !! | TTACTCGGATTAAATGTTTT+CGG | - | chr2_2:65487446-65487465 | Msa0265260:intron | 25.0% |
| ! | ATTTCCCCATATTAAGATTT+AGG | + | chr2_2:65487687-65487706 | None:intergenic | 25.0% |
| ! | CAAAAGAGGTAAATTTGAAA+AGG | + | chr2_2:65487893-65487912 | None:intergenic | 25.0% |
| !! | TTCAAATTTACCTCTTTTGT+AGG | - | chr2_2:65487894-65487913 | Msa0265260:intron | 25.0% |
| !!! | CATATAACTTGTTACTATAG+TGG | + | chr2_2:65488400-65488419 | None:intergenic | 25.0% |
| !!! | GTATTTTTCAACAGAGAAAA+TGG | - | chr2_2:65488621-65488640 | Msa0265260:intron | 25.0% |
| ! | TAAGTCAAAATGAAGAAGAA+AGG | - | chr2_2:65488921-65488940 | Msa0265260:intron | 25.0% |
| ! | AAGTCAAAATGAAGAAGAAA+GGG | - | chr2_2:65488922-65488941 | Msa0265260:intron | 25.0% |
| ! | TAGAAAAAGGCTTATATGTT+GGG | - | chr2_2:65489310-65489329 | Msa0265260:intron | 25.0% |
| ! | AGGAAGATAAAACAACATAA+TGG | + | chr2_2:65489752-65489771 | None:intergenic | 25.0% |
| !! | TTTTAATGTTGTCTGTGTTT+TGG | - | chr2_2:65490202-65490221 | Msa0265260:intron | 25.0% |
| !!! | CGTTACTTGTTATTTTGTTT+AGG | - | chr2_2:65490357-65490376 | Msa0265260:intron | 25.0% |
| ! | GTTAAATTGTCTTACTTAAG+TGG | - | chr2_2:65490379-65490398 | Msa0265260:intron | 25.0% |
| ! | ACTAATAGTACAGTAAGAAA+TGG | + | chr2_2:65490615-65490634 | None:intergenic | 25.0% |
| ! | AAGTTTCCATCATTTACAAT+AGG | + | chr2_2:65490778-65490797 | None:intergenic | 25.0% |
| ! | AAATGGATCTAAAGAAGTTA+TGG | - | chr2_2:65490831-65490850 | Msa0265260:intron | 25.0% |
| ! | ATGGTGAGTATATTCATTTA+TGG | - | chr2_2:65490850-65490869 | Msa0265260:intron | 25.0% |
| ! | TGGTGAGTATATTCATTTAT+GGG | - | chr2_2:65490851-65490870 | Msa0265260:intron | 25.0% |
| ! | TAAACAGAAAGTAATGAGAA+AGG | + | chr2_2:65490952-65490971 | None:intergenic | 25.0% |
| ! | AGAAGAAAAGAAGCAAAAAA+GGG | + | chr2_2:65491022-65491041 | None:intergenic | 25.0% |
| ! | CAAAAATCATGAATTAACCT+CGG | + | chr2_2:65491306-65491325 | None:intergenic | 25.0% |
| ! | AGCTGCAATAAAAAAAATCA+GGG | + | chr2_2:65491363-65491382 | None:intergenic | 25.0% |
| ! | TAGCTGCAATAAAAAAAATC+AGG | + | chr2_2:65491364-65491383 | None:intergenic | 25.0% |
| !!! | ATTTTTGACATTTTGGTCTA+TGG | - | chr2_2:65491395-65491414 | Msa0265260:intron | 25.0% |
| !!! | GCATCTTTTTTATATACTTG+TGG | + | chr2_2:65491861-65491880 | None:intergenic | 25.0% |
| AAAAAAAGAGTTTCTCTCAC+TGG | + | chr2_2:65486148-65486167 | None:intergenic | 30.0% | |
| AATTGGAGATTGGAAATTGA+AGG | + | chr2_2:65486253-65486272 | None:intergenic | 30.0% | |
| CCTAATAAAACCCTAGAAAT+TGG | + | chr2_2:65486277-65486296 | None:intergenic | 30.0% | |
| !!! | CCAATTTCTAGGGTTTTATT+AGG | - | chr2_2:65486274-65486293 | Msa0265260:three_prime_UTR | 30.0% |
| !!! | CAAACATGCAAGTTTTGTTT+TGG | + | chr2_2:65486603-65486622 | None:intergenic | 30.0% |
| AACAAAACTTGCATGTTTGT+TGG | - | chr2_2:65486604-65486623 | Msa0265260:CDS | 30.0% | |
| !! | TGTATGTGTATGTTTGGTTT+TGG | - | chr2_2:65486669-65486688 | Msa0265260:intron | 30.0% |
| !!! | GTATGTGTATGTTTGGTTTT+GGG | - | chr2_2:65486670-65486689 | Msa0265260:intron | 30.0% |
| !!! | TATGTGTATGTTTGGTTTTG+GGG | - | chr2_2:65486671-65486690 | Msa0265260:intron | 30.0% |
| ACATTCATGTAAAAGTGAGT+TGG | - | chr2_2:65486748-65486767 | Msa0265260:intron | 30.0% | |
| GCTTCAAGTAGAATCAATTA+TGG | - | chr2_2:65486824-65486843 | Msa0265260:intron | 30.0% | |
| TCAAGTAGAATCAATTATGG+AGG | - | chr2_2:65486827-65486846 | Msa0265260:intron | 30.0% | |
| AAGCCAAAATCAATTCTAGA+GGG | + | chr2_2:65486903-65486922 | None:intergenic | 30.0% | |
| !! | TGAATGTTTGGTTCCATTTT+AGG | + | chr2_2:65486928-65486947 | None:intergenic | 30.0% |
| ! | TGAAATAAAGGTGTGCTTTA+TGG | - | chr2_2:65486997-65487016 | Msa0265260:intron | 30.0% |
| AGAGGAATTGATGTATCTAA+AGG | - | chr2_2:65487057-65487076 | Msa0265260:intron | 30.0% | |
| CGACAAATTAAATTAGACAC+AGG | + | chr2_2:65487115-65487134 | None:intergenic | 30.0% | |
| !! | TTAATTTGTCGCTTGTGTAT+TGG | - | chr2_2:65487124-65487143 | Msa0265260:intron | 30.0% |
| TAACTCTTTCTCATTGCTAT+TGG | - | chr2_2:65487282-65487301 | Msa0265260:CDS | 30.0% | |
| ! | TTGTATAAAGTACTTCAAGG+CGG | - | chr2_2:65487356-65487375 | Msa0265260:CDS | 30.0% |
| AGAGTACAATGTTCTTGTAA+TGG | - | chr2_2:65487527-65487546 | Msa0265260:intron | 30.0% | |
| !! | TGTTCTTGTAATGGATTTAC+TGG | - | chr2_2:65487536-65487555 | Msa0265260:intron | 30.0% |
| !! | GTTCTTGTAATGGATTTACT+GGG | - | chr2_2:65487537-65487556 | Msa0265260:intron | 30.0% |
| GTCCCTATGTAAAAATGATT+TGG | + | chr2_2:65487751-65487770 | None:intergenic | 30.0% | |
| ! | GAATCTCTTGTTTACATTGT+TGG | - | chr2_2:65488256-65488275 | Msa0265260:intron | 30.0% |
| AATCGATTAACTACCAAATG+TGG | - | chr2_2:65488337-65488356 | Msa0265260:intron | 30.0% | |
| TGGATAGTCTAATAACTACA+GGG | - | chr2_2:65488656-65488675 | Msa0265260:intron | 30.0% | |
| AACCATTAGAAGAGATTTAG+AGG | - | chr2_2:65489216-65489235 | Msa0265260:intron | 30.0% | |
| ATCCTCTAAATCTCTTCTAA+TGG | + | chr2_2:65489221-65489240 | None:intergenic | 30.0% | |
| ! | TTTTCGACCTAATATGTGAT+AGG | - | chr2_2:65489245-65489264 | Msa0265260:intron | 30.0% |
| TAATATGTGATAGGACTTTG+CGG | - | chr2_2:65489254-65489273 | Msa0265260:intron | 30.0% | |
| GTAGAAAAAGGCTTATATGT+TGG | - | chr2_2:65489309-65489328 | Msa0265260:intron | 30.0% | |
| ! | AGTTCTTATTCTCTCTGAAA+AGG | + | chr2_2:65489507-65489526 | None:intergenic | 30.0% |
| ATGAATACACATCTTGGAAT+TGG | - | chr2_2:65489553-65489572 | Msa0265260:intron | 30.0% | |
| !! | GTTCTTATGTACTTTTTGAG+AGG | - | chr2_2:65489710-65489729 | Msa0265260:intron | 30.0% |
| !! | TTATGTACTTTTTGAGAGGA+AGG | - | chr2_2:65489714-65489733 | Msa0265260:intron | 30.0% |
| GATAAAACAACATAATGGCA+AGG | + | chr2_2:65489747-65489766 | None:intergenic | 30.0% | |
| GAAAGTTTCTACTTCTATTG+AGG | - | chr2_2:65489883-65489902 | Msa0265260:intron | 30.0% | |
| ! | CTTTTCAGATATGCATAATC+TGG | + | chr2_2:65490071-65490090 | None:intergenic | 30.0% |
| CAGATTATGCATATCTGAAA+AGG | - | chr2_2:65490069-65490088 | Msa0265260:intron | 30.0% | |
| TTAAACCTTCACGAATGAAA+AGG | + | chr2_2:65490106-65490125 | None:intergenic | 30.0% | |
| ! | TAAGGTCTTTGATAACTAGA+TGG | - | chr2_2:65490167-65490186 | Msa0265260:intron | 30.0% |
| AATCGAAGACATAATCAAAC+TGG | + | chr2_2:65490255-65490274 | None:intergenic | 30.0% | |
| AGTTTGATTATGTCTTCGAT+TGG | - | chr2_2:65490254-65490273 | Msa0265260:intron | 30.0% | |
| AGATTGCTGATACTTCAAAA+TGG | + | chr2_2:65490281-65490300 | None:intergenic | 30.0% | |
| !! | TATATTTACTTTTACGACCC+TGG | - | chr2_2:65490483-65490502 | Msa0265260:CDS | 30.0% |
| ACACCTAAAATAATAGACCA+GGG | + | chr2_2:65490503-65490522 | None:intergenic | 30.0% | |
| TTCTTAGCTTAACAATGTGT+TGG | - | chr2_2:65490536-65490555 | Msa0265260:CDS | 30.0% | |
| TAATGGGGAAATTTCTGTTT+AGG | - | chr2_2:65490688-65490707 | Msa0265260:intron | 30.0% | |
| ATCAACGCTGTATTTCAAAA+TGG | - | chr2_2:65490977-65490996 | Msa0265260:intron | 30.0% | |
| CAGAAGAAAAGAAGCAAAAA+AGG | + | chr2_2:65491023-65491042 | None:intergenic | 30.0% | |
| ! | ACTTAGTGTGTTAGTACTTT+TGG | - | chr2_2:65491257-65491276 | Msa0265260:intron | 30.0% |
| ! | CTTAGTGTGTTAGTACTTTT+GGG | - | chr2_2:65491258-65491277 | Msa0265260:intron | 30.0% |
| !! | TGTCTAGTTCTAATTTCTTC+CGG | - | chr2_2:65491428-65491447 | Msa0265260:intron | 30.0% |
| AAATTCACCTATCACATCAT+CGG | - | chr2_2:65491588-65491607 | Msa0265260:intron | 30.0% | |
| CAAAGCTTTACCCATAAAAA+AGG | - | chr2_2:65491901-65491920 | Msa0265260:five_prime_UTR | 30.0% | |
| !!! | ACAGAAGAAGCCTTTTTTAT+GGG | + | chr2_2:65491914-65491933 | None:intergenic | 30.0% |
| !!! | AACAGAAGAAGCCTTTTTTA+TGG | + | chr2_2:65491915-65491934 | None:intergenic | 30.0% |
| !!! | CATCTTTTTTACGTTCAAGT+GGG | - | chr2_2:65492054-65492073 | Msa0265260:five_prime_UTR | 30.0% |
| GAAAAATGAAGAAAAGGCGA+GGG | + | chr2_2:65486184-65486203 | None:intergenic | 35.0% | |
| TGAAAAATGAAGAAAAGGCG+AGG | + | chr2_2:65486185-65486204 | None:intergenic | 35.0% | |
| AGATTGGAAATTGAAGGAGT+TGG | + | chr2_2:65486247-65486266 | None:intergenic | 35.0% | |
| AGAAATTGGGAATTGGAGAT+TGG | + | chr2_2:65486263-65486282 | None:intergenic | 35.0% | |
| ATCTCCAATTCCCAATTTCT+AGG | - | chr2_2:65486263-65486282 | Msa0265260:three_prime_UTR | 35.0% | |
| TCTCCAATTCCCAATTTCTA+GGG | - | chr2_2:65486264-65486283 | Msa0265260:three_prime_UTR | 35.0% | |
| AAACCCTAGAAATTGGGAAT+TGG | + | chr2_2:65486270-65486289 | None:intergenic | 35.0% | |
| !!! | TACCCCTCTAGAATTGATTT+TGG | - | chr2_2:65486897-65486916 | Msa0265260:intron | 35.0% |
| ! | AGCCAAAATCAATTCTAGAG+GGG | + | chr2_2:65486902-65486921 | None:intergenic | 35.0% |
| GAAGCCAAAATCAATTCTAG+AGG | + | chr2_2:65486904-65486923 | None:intergenic | 35.0% | |
| !!! | GATTTTGGCTTCTCCTAAAA+TGG | - | chr2_2:65486912-65486931 | Msa0265260:intron | 35.0% |
| !! | ATGTATCTAAAGGTGCTGAT+AGG | - | chr2_2:65487067-65487086 | Msa0265260:intron | 35.0% |
| !! | TATTGGTTCGACAACTCAAA+AGG | - | chr2_2:65487141-65487160 | Msa0265260:intron | 35.0% |
| !! | ATTGGTTCGACAACTCAAAA+GGG | - | chr2_2:65487142-65487161 | Msa0265260:intron | 35.0% |
| ! | AACAACGACGTTGATTGTTT+AGG | - | chr2_2:65487234-65487253 | Msa0265260:intron | 35.0% |
| ! | TTCTCATTGCTATTGGATTC+AGG | - | chr2_2:65487289-65487308 | Msa0265260:CDS | 35.0% |
| ! | TTTGATTCGTACAACAACTG+AGG | + | chr2_2:65487335-65487354 | None:intergenic | 35.0% |
| GGGTATAAATTCGGTAAGAT+AGG | + | chr2_2:65487391-65487410 | None:intergenic | 35.0% | |
| ! | TCGGATTAAATGTTTTCGGT+TGG | - | chr2_2:65487450-65487469 | Msa0265260:intron | 35.0% |
| !!! | TTCGGTTGGCTACTTTTATA+TGG | - | chr2_2:65487464-65487483 | Msa0265260:intron | 35.0% |
| !! | CAGCATGAGTACAGTTTTAA+GGG | + | chr2_2:65487607-65487626 | None:intergenic | 35.0% |
| AATCCAAGAGATGACAGAAA+GGG | + | chr2_2:65487862-65487881 | None:intergenic | 35.0% | |
| TCGGTCTTGCTAAAAAATAC+AGG | - | chr2_2:65487932-65487951 | Msa0265260:intron | 35.0% | |
| CGGTCTTGCTAAAAAATACA+GGG | - | chr2_2:65487933-65487952 | Msa0265260:intron | 35.0% | |
| AATGGCAGAAAATACCTGTA+AGG | + | chr2_2:65487982-65488001 | None:intergenic | 35.0% | |
| ACTTGCTTCAACATTCAACT+AGG | + | chr2_2:65488038-65488057 | None:intergenic | 35.0% | |
| TGCATGACTTAACTATTCAC+TGG | - | chr2_2:65488145-65488164 | Msa0265260:intron | 35.0% | |
| GCATGACTTAACTATTCACT+GGG | - | chr2_2:65488146-65488165 | Msa0265260:intron | 35.0% | |
| TTAATTCGGGTGATGACATT+AGG | - | chr2_2:65488195-65488214 | Msa0265260:CDS | 35.0% | |
| !! | ATTAGGTGGTGCTTTTTGTT+TGG | - | chr2_2:65488212-65488231 | Msa0265260:CDS | 35.0% |
| ! | ATCCTTTTTGTCCCAATTGT+GGG | - | chr2_2:65488459-65488478 | Msa0265260:intron | 35.0% |
| GTGGATAGTCTAATAACTAC+AGG | - | chr2_2:65488655-65488674 | Msa0265260:intron | 35.0% | |
| ATAGTCTAATAACTACAGGG+AGG | - | chr2_2:65488659-65488678 | Msa0265260:intron | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | + | chr2_2:65488881-65488900 | None:intergenic | 35.0% |
| GATTAGAGATCTAGAGATCT+AGG | - | chr2_2:65488960-65488979 | Msa0265260:intron | 35.0% | |
| GCAAAGTCCTATCACATATT+AGG | + | chr2_2:65489255-65489274 | None:intergenic | 35.0% | |
| ! | CATATAAGCCTTTTTCTACC+AGG | + | chr2_2:65489308-65489327 | None:intergenic | 35.0% |
| !! | CACAACTAAGTTGATTACTG+GGG | + | chr2_2:65489454-65489473 | None:intergenic | 35.0% |
| !! | CCACAACTAAGTTGATTACT+GGG | + | chr2_2:65489455-65489474 | None:intergenic | 35.0% |
| CCAGTAATCAACTTAGTTGT+GGG | - | chr2_2:65489453-65489472 | Msa0265260:intron | 35.0% | |
| AGAGAGAATAAGAACTTGAC+AGG | - | chr2_2:65489511-65489530 | Msa0265260:intron | 35.0% | |
| GCTAGTATGAATACACATCT+TGG | - | chr2_2:65489547-65489566 | Msa0265260:intron | 35.0% | |
| CTTGCCTTTGTATCTATTGT+TGG | - | chr2_2:65489605-65489624 | Msa0265260:intron | 35.0% | |
| AACGCCAACAATAGATACAA+AGG | + | chr2_2:65489612-65489631 | None:intergenic | 35.0% | |
| TCCTTTATCCTAATAAAGCG+TGG | - | chr2_2:65489954-65489973 | Msa0265260:intron | 35.0% | |
| ! | GTCTTTGATAACTAGATGGT+CGG | - | chr2_2:65490171-65490190 | Msa0265260:intron | 35.0% |
| ! | TCTTTGATAACTAGATGGTC+GGG | - | chr2_2:65490172-65490191 | Msa0265260:intron | 35.0% |
| ! | TTGTATTCTTTTGTTGCTGC+AGG | - | chr2_2:65490226-65490245 | Msa0265260:intron | 35.0% |
| TTACTTAAGTGGCATATTGC+AGG | - | chr2_2:65490390-65490409 | Msa0265260:intron | 35.0% | |
| TACTTAAGTGGCATATTGCA+GGG | - | chr2_2:65490391-65490410 | Msa0265260:intron | 35.0% | |
| CACACCTAAAATAATAGACC+AGG | + | chr2_2:65490504-65490523 | None:intergenic | 35.0% | |
| !!! | GGTCTATTATTTTAGGTGTG+TGG | - | chr2_2:65490504-65490523 | Msa0265260:CDS | 35.0% |
| TCTGGACCTATTGTAAATGA+TGG | - | chr2_2:65490769-65490788 | Msa0265260:intron | 35.0% | |
| TTAGATCCATTTGAGTCACT+TGG | + | chr2_2:65490823-65490842 | None:intergenic | 35.0% | |
| AGAGATAACTTGGTCATAAG+TGG | + | chr2_2:65490878-65490897 | None:intergenic | 35.0% | |
| GCTTTCTACAAGAGATAACT+TGG | + | chr2_2:65490888-65490907 | None:intergenic | 35.0% | |
| ACAGAAAGTAATGAGAAAGG+TGG | + | chr2_2:65490949-65490968 | None:intergenic | 35.0% | |
| ATGTAGCAAATCTGAAGAAG+CGG | + | chr2_2:65491181-65491200 | None:intergenic | 35.0% | |
| !! | AATTTTGAGTCAACTATCCG+AGG | - | chr2_2:65491658-65491677 | Msa0265260:intron | 35.0% |
| ! | GTCTGTTGTTCATTTTGTTG+AGG | - | chr2_2:65491808-65491827 | Msa0265260:five_prime_UTR | 35.0% |
| AAAAAAGATGCTTATGGGGT+TGG | - | chr2_2:65491870-65491889 | Msa0265260:five_prime_UTR | 35.0% | |
| ! | TTTATGGGTAAAGCTTTGTC+AGG | + | chr2_2:65491899-65491918 | None:intergenic | 35.0% |
| TGTATAAAGCTGAAGCTGAA+GGG | + | chr2_2:65491958-65491977 | None:intergenic | 35.0% | |
| TTGTATAAAGCTGAAGCTGA+AGG | + | chr2_2:65491959-65491978 | None:intergenic | 35.0% | |
| CCACTTGAACGTAAAAAAGA+TGG | + | chr2_2:65492056-65492075 | None:intergenic | 35.0% | |
| !!! | CCATCTTTTTTACGTTCAAG+TGG | - | chr2_2:65492053-65492072 | Msa0265260:five_prime_UTR | 35.0% |
| GAGTTGCATGTAGAGATACT+TGG | + | chr2_2:65485956-65485975 | None:intergenic | 40.0% | |
| !! | AAGGAGTTGGTGAAGAGAAA+GGG | + | chr2_2:65486234-65486253 | None:intergenic | 40.0% |
| ! | TAGGTTTTTACCCGATCCAA+TGG | - | chr2_2:65486293-65486312 | Msa0265260:three_prime_UTR | 40.0% |
| AATACGAGGTTCCATTGGAT+CGG | + | chr2_2:65486307-65486326 | None:intergenic | 40.0% | |
| TTACCAATACGAGGTTCCAT+TGG | + | chr2_2:65486312-65486331 | None:intergenic | 40.0% | |
| ! | ATTGGTAACAAGTTCCGTCT+TGG | - | chr2_2:65486324-65486343 | Msa0265260:three_prime_UTR | 40.0% |
| ! | TACCAATTTTGCGACCAAGA+CGG | + | chr2_2:65486341-65486360 | None:intergenic | 40.0% |
| !! | AAAATTGGTAGCGGATCCTT+CGG | - | chr2_2:65486351-65486370 | Msa0265260:exon | 40.0% |
| ! | TTGGTTCGACAACTCAAAAG+GGG | - | chr2_2:65487143-65487162 | Msa0265260:intron | 40.0% |
| CTGAATAAATCCTCGAGACT+TGG | + | chr2_2:65487564-65487583 | None:intergenic | 40.0% | |
| ! | CCAGCATGAGTACAGTTTTA+AGG | + | chr2_2:65487608-65487627 | None:intergenic | 40.0% |
| CCTTAAAACTGTACTCATGC+TGG | - | chr2_2:65487605-65487624 | Msa0265260:intron | 40.0% | |
| GGAAAGAGACGAAGCAATAA+AGG | + | chr2_2:65487651-65487670 | None:intergenic | 40.0% | |
| AAACCAGACAACTTCCTCAT+GGG | - | chr2_2:65487774-65487793 | Msa0265260:CDS | 40.0% | |
| TATCCCTTTCTGTCATCTCT+TGG | - | chr2_2:65487856-65487875 | Msa0265260:intron | 40.0% | |
| CAATCCAAGAGATGACAGAA+AGG | + | chr2_2:65487863-65487882 | None:intergenic | 40.0% | |
| ATGGCATACACCTACAAAAG+AGG | + | chr2_2:65487907-65487926 | None:intergenic | 40.0% | |
| !! | TAGGTGTATGCCATTGACTT+CGG | - | chr2_2:65487913-65487932 | Msa0265260:intron | 40.0% |
| TTTAGCAAGACCGAAGTCAA+TGG | + | chr2_2:65487926-65487945 | None:intergenic | 40.0% | |
| CCTGTAAGGTATATGCTGAT+GGG | + | chr2_2:65487968-65487987 | None:intergenic | 40.0% | |
| ACCTGTAAGGTATATGCTGA+TGG | + | chr2_2:65487969-65487988 | None:intergenic | 40.0% | |
| CTCTGTTACACATCCACATT+TGG | + | chr2_2:65488353-65488372 | None:intergenic | 40.0% | |
| GATGTGTAACAGAGAATTGC+TGG | - | chr2_2:65488359-65488378 | Msa0265260:CDS | 40.0% | |
| ! | GATCCTTTTTGTCCCAATTG+TGG | - | chr2_2:65488458-65488477 | Msa0265260:intron | 40.0% |
| AGAAACTAGCACCCACAATT+GGG | + | chr2_2:65488473-65488492 | None:intergenic | 40.0% | |
| TAGAAACTAGCACCCACAAT+TGG | + | chr2_2:65488474-65488493 | None:intergenic | 40.0% | |
| TTTCAACAGAGAAAATGGCG+AGG | - | chr2_2:65488626-65488645 | Msa0265260:intron | 40.0% | |
| AACTGTAGGACTGACAATAG+CGG | - | chr2_2:65488690-65488709 | Msa0265260:intron | 40.0% | |
| GTTTCCGCTTTGACAACTAT+GGG | - | chr2_2:65489190-65489209 | Msa0265260:intron | 40.0% | |
| TTGTCCCATAGTTGTCAAAG+CGG | + | chr2_2:65489197-65489216 | None:intergenic | 40.0% | |
| ! | TTGCGGTGTCAATTGATTCA+TGG | - | chr2_2:65489271-65489290 | Msa0265260:intron | 40.0% |
| ! | CTTTTTCTACCAGGTGAGAT+TGG | + | chr2_2:65489299-65489318 | None:intergenic | 40.0% |
| CAATCTCACCTGGTAGAAAA+AGG | - | chr2_2:65489297-65489316 | Msa0265260:intron | 40.0% | |
| CCCAGTAATCAACTTAGTTG+TGG | - | chr2_2:65489452-65489471 | Msa0265260:intron | 40.0% | |
| !! | CCCACAACTAAGTTGATTAC+TGG | + | chr2_2:65489456-65489475 | None:intergenic | 40.0% |
| AGATACAAAGGCAAGTGAGT+TGG | + | chr2_2:65489600-65489619 | None:intergenic | 40.0% | |
| TTGGCGTTTGATTCTGAACT+TGG | - | chr2_2:65489624-65489643 | Msa0265260:intron | 40.0% | |
| TGGCGTTTGATTCTGAACTT+GGG | - | chr2_2:65489625-65489644 | Msa0265260:intron | 40.0% | |
| ATTTATCAGAGCAAAGCCGT+AGG | - | chr2_2:65489663-65489682 | Msa0265260:intron | 40.0% | |
| TTTATCAGAGCAAAGCCGTA+GGG | - | chr2_2:65489664-65489683 | Msa0265260:intron | 40.0% | |
| ! | GCCACGCTTTATTAGGATAA+AGG | + | chr2_2:65489958-65489977 | None:intergenic | 40.0% |
| ! | AAAGCAAGCCACGCTTTATT+AGG | + | chr2_2:65489965-65489984 | None:intergenic | 40.0% |
| ! | TTTTGTTAGTCCTTGTGTCG+TGG | - | chr2_2:65489984-65490003 | Msa0265260:intron | 40.0% |
| AAGTACGAAGCGAATTCTGA+GGG | + | chr2_2:65490014-65490033 | None:intergenic | 40.0% | |
| CTTCGTACTTCCATTACTGT+CGG | - | chr2_2:65490024-65490043 | Msa0265260:intron | 40.0% | |
| ! | CGACCCTGGTCTATTATTTT+AGG | - | chr2_2:65490497-65490516 | Msa0265260:CDS | 40.0% |
| TGGGGAAATTTCTGTTTAGG+TGG | - | chr2_2:65490691-65490710 | Msa0265260:intron | 40.0% | |
| GGGGAAATTTCTGTTTAGGT+GGG | - | chr2_2:65490692-65490711 | Msa0265260:intron | 40.0% | |
| GGGAAATTTCTGTTTAGGTG+GGG | - | chr2_2:65490693-65490712 | Msa0265260:intron | 40.0% | |
| ! | CTTGTCTAGACAAAAAGCAC+CGG | - | chr2_2:65490795-65490814 | Msa0265260:intron | 40.0% |
| ATTAACCTCGGCAAACACAT+AGG | + | chr2_2:65491294-65491313 | None:intergenic | 40.0% | |
| ! | TTTGAGCACCAGAGGTTTTA+AGG | + | chr2_2:65491567-65491586 | None:intergenic | 40.0% |
| TGAATTTCTTTGAGCACCAG+AGG | + | chr2_2:65491575-65491594 | None:intergenic | 40.0% | |
| CACAAAGCAACAACATCTTC+TGG | - | chr2_2:65491613-65491632 | Msa0265260:intron | 40.0% | |
| AATTCAGGCTCTCAATACCT+CGG | + | chr2_2:65491678-65491697 | None:intergenic | 40.0% | |
| CCTTCTCGTCATTGAAATTC+AGG | + | chr2_2:65491693-65491712 | None:intergenic | 40.0% | |
| CCTGAATTTCAATGACGAGA+AGG | - | chr2_2:65491690-65491709 | Msa0265260:intron | 40.0% | |
| TCTTGATCACCGTATCTTGT+TGG | - | chr2_2:65491734-65491753 | Msa0265260:CDS | 40.0% | |
| ACAACAGACAACAATCCACT+CGG | + | chr2_2:65491797-65491816 | None:intergenic | 40.0% | |
| TGAGGAAAGCTACTACAAGT+TGG | - | chr2_2:65491826-65491845 | Msa0265260:five_prime_UTR | 40.0% | |
| GAGGAAAGCTACTACAAGTT+GGG | - | chr2_2:65491827-65491846 | Msa0265260:five_prime_UTR | 40.0% | |
| GGCTACGTGTTTATTCGAGT+TGG | + | chr2_2:65485978-65485997 | None:intergenic | 45.0% | |
| ACTCGAATAAACACGTAGCC+AGG | - | chr2_2:65485978-65485997 | Msa0265260:three_prime_UTR | 45.0% | |
| AGCAACTAGATCAAACCACC+TGG | + | chr2_2:65485999-65486018 | None:intergenic | 45.0% | |
| TGGTTTGATCTAGTTGCTGC+TGG | - | chr2_2:65486001-65486020 | Msa0265260:three_prime_UTR | 45.0% | |
| GAAAAGGCGAGGGACAAAAT+TGG | + | chr2_2:65486174-65486193 | None:intergenic | 45.0% | |
| TTGGTGAAGAGAAAGGGAAG+GGG | + | chr2_2:65486228-65486247 | None:intergenic | 45.0% | |
| ! | GTTGGTGAAGAGAAAGGGAA+GGG | + | chr2_2:65486229-65486248 | None:intergenic | 45.0% |
| !! | AGTTGGTGAAGAGAAAGGGA+AGG | + | chr2_2:65486230-65486249 | None:intergenic | 45.0% |
| !! | GAAGGAGTTGGTGAAGAGAA+AGG | + | chr2_2:65486235-65486254 | None:intergenic | 45.0% |
| ATACGAGGTTCCATTGGATC+GGG | + | chr2_2:65486306-65486325 | None:intergenic | 45.0% | |
| GATCCAATGGAACCTCGTAT+TGG | - | chr2_2:65486306-65486325 | Msa0265260:three_prime_UTR | 45.0% | |
| !! | CGGAACTTGTTACCAATACG+AGG | + | chr2_2:65486321-65486340 | None:intergenic | 45.0% |
| TTCCGTCTTGGTCGCAAAAT+TGG | - | chr2_2:65486336-65486355 | Msa0265260:three_prime_UTR | 45.0% | |
| CTTGGTCGCAAAATTGGTAG+CGG | - | chr2_2:65486342-65486361 | Msa0265260:three_prime_UTR | 45.0% | |
| GGTGTGCTTTATGGAATGTG+TGG | - | chr2_2:65487006-65487025 | Msa0265260:intron | 45.0% | |
| GTGCTTTATGGAATGTGTGG+TGG | - | chr2_2:65487009-65487028 | Msa0265260:intron | 45.0% | |
| CTGATAGGTGTGTGTGACTA+AGG | - | chr2_2:65487082-65487101 | Msa0265260:intron | 45.0% | |
| !! | GACAACTCAAAAGGGGTGTT+TGG | - | chr2_2:65487150-65487169 | Msa0265260:intron | 45.0% |
| GTACAACAACTGAGGATGCT+TGG | + | chr2_2:65487327-65487346 | None:intergenic | 45.0% | |
| !!! | GGCTACTTTTATATGGCAGC+TGG | - | chr2_2:65487471-65487490 | Msa0265260:intron | 45.0% |
| ATCCCGAATGTGAGATGGTT+TGG | - | chr2_2:65487495-65487514 | Msa0265260:intron | 45.0% | |
| ACGCCAAACCATCTCACATT+CGG | + | chr2_2:65487501-65487520 | None:intergenic | 45.0% | |
| CAAACCAGACAACTTCCTCA+TGG | - | chr2_2:65487773-65487792 | Msa0265260:CDS | 45.0% | |
| ! | AGGTATATGCTGATGGGTAG+AGG | + | chr2_2:65487962-65487981 | None:intergenic | 45.0% |
| CCCATCAGCATATACCTTAC+AGG | - | chr2_2:65487965-65487984 | Msa0265260:intron | 45.0% | |
| ATTCGGGTGATGACATTAGG+TGG | - | chr2_2:65488198-65488217 | Msa0265260:CDS | 45.0% | |
| CACCCACAATTGGGACAAAA+AGG | + | chr2_2:65488464-65488483 | None:intergenic | 45.0% | |
| AGAGAAAATGGCGAGGTCTT+AGG | - | chr2_2:65488633-65488652 | Msa0265260:intron | 45.0% | |
| GGGAGGTGAAAGAAAACTGT+AGG | - | chr2_2:65488676-65488695 | Msa0265260:intron | 45.0% | |
| AGGCAAAAGCGGAACAAAAG+CGG | - | chr2_2:65488788-65488807 | Msa0265260:intron | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | + | chr2_2:65489189-65489208 | None:intergenic | 45.0% | |
| CGTTTCCGCTTTGACAACTA+TGG | - | chr2_2:65489189-65489208 | Msa0265260:intron | 45.0% | |
| GGCGTTTGATTCTGAACTTG+GGG | - | chr2_2:65489626-65489645 | Msa0265260:intron | 45.0% | |
| GTGATTCTAAGTCGTCCCTA+CGG | + | chr2_2:65489682-65489701 | None:intergenic | 45.0% | |
| AGGGACGACTTAGAATCACT+TGG | - | chr2_2:65489683-65489702 | Msa0265260:intron | 45.0% | |
| ! | GGTATTTCTACAGCCTTCCA+TGG | - | chr2_2:65489807-65489826 | Msa0265260:intron | 45.0% |
| ! | CTTTTAATCCCTGCCATGGA+AGG | + | chr2_2:65489823-65489842 | None:intergenic | 45.0% |
| AGTACGAAGCGAATTCTGAG+GGG | + | chr2_2:65490013-65490032 | None:intergenic | 45.0% | |
| GAAGTACGAAGCGAATTCTG+AGG | + | chr2_2:65490015-65490034 | None:intergenic | 45.0% | |
| TCCATTACTGTCGGTCATTG+CGG | - | chr2_2:65490033-65490052 | Msa0265260:intron | 45.0% | |
| TTCTGTTTAGGTGGGGAAGA+TGG | - | chr2_2:65490700-65490719 | Msa0265260:intron | 45.0% | |
| AAGATGGTAGACATGCTGGT+TGG | - | chr2_2:65490716-65490735 | Msa0265260:CDS | 45.0% | |
| CCATTTGAGTCACTTGGTAC+CGG | + | chr2_2:65490817-65490836 | None:intergenic | 45.0% | |
| CAATTCTGCACAGACACACA+TGG | + | chr2_2:65491078-65491097 | None:intergenic | 45.0% | |
| TATGTCCTATGTGTTTGCCG+AGG | - | chr2_2:65491286-65491305 | Msa0265260:intron | 45.0% | |
| !! | AGGGTATTGTGACAACAAGC+AGG | + | chr2_2:65491344-65491363 | None:intergenic | 45.0% |
| TCTAATTTCTTCCGGCCTAG+TGG | - | chr2_2:65491436-65491455 | Msa0265260:intron | 45.0% | |
| ACTCGTCTTGTAGATCCACT+AGG | + | chr2_2:65491454-65491473 | None:intergenic | 45.0% | |
| AGTGGATCTACAAGACGAGT+AGG | - | chr2_2:65491454-65491473 | Msa0265260:intron | 45.0% | |
| AACAACTGCATCACGACTGT+TGG | + | chr2_2:65491488-65491507 | None:intergenic | 45.0% | |
| TTGTGCTCCGATGATGTGAT+AGG | + | chr2_2:65491598-65491617 | None:intergenic | 45.0% | |
| CAAGATACGGTGATCAAGAG+TGG | + | chr2_2:65491733-65491752 | None:intergenic | 45.0% | |
| !! | AAATTAATTATTTATTTACT+TGG | - | chr2_2:65489786-65489805 | Msa0265260:intron | 5.0% |
| !!! | TTTTAATGTTTTTTTTTTAA+TGG | - | chr2_2:65490637-65490656 | Msa0265260:intron | 5.0% |
| !!! | TTTAATGTTTTTTTTTTAAT+GGG | - | chr2_2:65490638-65490657 | Msa0265260:intron | 5.0% |
| !!! | TTTTTTTTTTGAAAAATTAA+TGG | - | chr2_2:65490671-65490690 | Msa0265260:intron | 5.0% |
| !!! | TTTTTTTTTGAAAAATTAAT+GGG | - | chr2_2:65490672-65490691 | Msa0265260:intron | 5.0% |
| CGAATAAACACGTAGCCAGG+TGG | - | chr2_2:65485981-65486000 | Msa0265260:three_prime_UTR | 50.0% | |
| AAGGGAAGGGGGAAAAGGAA+CGG | + | chr2_2:65486216-65486235 | None:intergenic | 50.0% | |
| AGAGAAAGGGAAGGGGGAAA+AGG | + | chr2_2:65486221-65486240 | None:intergenic | 50.0% | |
| TGGTGAAGAGAAAGGGAAGG+GGG | + | chr2_2:65486227-65486246 | None:intergenic | 50.0% | |
| TCCTTCGGCGAGATCTATCT+CGG | - | chr2_2:65486366-65486385 | Msa0265260:exon | 50.0% | |
| CTGGTATCCCGAATGTGAGA+TGG | - | chr2_2:65487490-65487509 | Msa0265260:intron | 50.0% | |
| CGCCAAACCATCTCACATTC+GGG | + | chr2_2:65487500-65487519 | None:intergenic | 50.0% | |
| ! | GTGAGATGGTTTGGCGTAGA+AGG | - | chr2_2:65487504-65487523 | Msa0265260:intron | 50.0% |
| TTTACTGGGACCAAGTCTCG+AGG | - | chr2_2:65487551-65487570 | Msa0265260:intron | 50.0% | |
| ! | ACTCATGCTGGCTGATCAGA+TGG | - | chr2_2:65487617-65487636 | Msa0265260:intron | 50.0% |
| ! | ATGCTGGCTGATCAGATGGT+AGG | - | chr2_2:65487621-65487640 | Msa0265260:CDS | 50.0% |
| AGACCCATGAGGAAGTTGTC+TGG | + | chr2_2:65487780-65487799 | None:intergenic | 50.0% | |
| AGACAACTTCCTCATGGGTC+TGG | - | chr2_2:65487779-65487798 | Msa0265260:CDS | 50.0% | |
| GACAACTTCCTCATGGGTCT+GGG | - | chr2_2:65487780-65487799 | Msa0265260:CDS | 50.0% | |
| ACAACTTCCTCATGGGTCTG+GGG | - | chr2_2:65487781-65487800 | Msa0265260:CDS | 50.0% | |
| GAAAATGGCGAGGTCTTAGG+TGG | - | chr2_2:65488636-65488655 | Msa0265260:intron | 50.0% | |
| CTGACAATAGCGGTCTAACG+CGG | - | chr2_2:65488700-65488719 | Msa0265260:intron | 50.0% | |
| GGCAAAAGCGGAACAAAAGC+GGG | - | chr2_2:65488789-65488808 | Msa0265260:intron | 50.0% | |
| TTCATGGAGCCAATCTCACC+TGG | - | chr2_2:65489287-65489306 | Msa0265260:intron | 50.0% | |
| TTTCTACAGCCTTCCATGGC+AGG | - | chr2_2:65489811-65489830 | Msa0265260:intron | 50.0% | |
| TTCTACAGCCTTCCATGGCA+GGG | - | chr2_2:65489812-65489831 | Msa0265260:intron | 50.0% | |
| !! | CCTGCTTTTAATCCCTGCCA+TGG | + | chr2_2:65489827-65489846 | None:intergenic | 50.0% |
| CCATGGCAGGGATTAAAAGC+AGG | - | chr2_2:65489824-65489843 | Msa0265260:intron | 50.0% | |
| ACCGCAATGACCGACAGTAA+TGG | + | chr2_2:65490037-65490056 | None:intergenic | 50.0% | |
| ! | CGCGACCTTTTCATTCGTGA+AGG | - | chr2_2:65490098-65490117 | Msa0265260:intron | 50.0% |
| CTTACAATGGCACGTGCAGA+AGG | + | chr2_2:65490316-65490335 | None:intergenic | 50.0% | |
| ! | TCTGCACGTGCCATTGTAAG+TGG | - | chr2_2:65490316-65490335 | Msa0265260:CDS | 50.0% |
| TAGCACACCGCCACTTACAA+TGG | + | chr2_2:65490329-65490348 | None:intergenic | 50.0% | |
| AGTGGCATATTGCAGGGTTC+TGG | - | chr2_2:65490397-65490416 | Msa0265260:intron | 50.0% | |
| ! | ATATTGCAGGGTTCTGGTGC+TGG | - | chr2_2:65490403-65490422 | Msa0265260:intron | 50.0% |
| ! | TATTGCAGGGTTCTGGTGCT+GGG | - | chr2_2:65490404-65490423 | Msa0265260:intron | 50.0% |
| CCAGAGTTTCTTCTACGAGC+AGG | + | chr2_2:65490754-65490773 | None:intergenic | 50.0% | |
| CCTGCTCGTAGAAGAAACTC+TGG | - | chr2_2:65490751-65490770 | Msa0265260:CDS | 50.0% | |
| CCGGTACCAAGTGACTCAAA+TGG | - | chr2_2:65490814-65490833 | Msa0265260:intron | 50.0% | |
| GTCTTGTAGATCCACTAGGC+CGG | + | chr2_2:65491450-65491469 | None:intergenic | 50.0% | |
| !!! | GAGGTTTTAAGGAGTGCTCC+AGG | + | chr2_2:65491556-65491575 | None:intergenic | 50.0% |
| ! | GGAGCACTCCTTAAAACCTC+TGG | - | chr2_2:65491556-65491575 | Msa0265260:intron | 50.0% |
| CTTTCTCACAAACTGCCGAG+TGG | - | chr2_2:65491779-65491798 | Msa0265260:exon | 50.0% | |
| TGGATGCCAAAGCAACCCTG+AGG | - | chr2_2:65486063-65486082 | Msa0265260:three_prime_UTR | 55.0% | |
| GGATGCCAAAGCAACCCTGA+GGG | - | chr2_2:65486064-65486083 | Msa0265260:three_prime_UTR | 55.0% | |
| GATGCCAAAGCAACCCTGAG+GGG | - | chr2_2:65486065-65486084 | Msa0265260:three_prime_UTR | 55.0% | |
| GATTGTCTCTCCTCCCCTCA+GGG | + | chr2_2:65486081-65486100 | None:intergenic | 55.0% | |
| AGATTGTCTCTCCTCCCCTC+AGG | + | chr2_2:65486082-65486101 | None:intergenic | 55.0% | |
| AGGGAAGGGGGAAAAGGAAC+GGG | + | chr2_2:65486215-65486234 | None:intergenic | 55.0% | |
| ACCGAGATAGATCTCGCCGA+AGG | + | chr2_2:65486370-65486389 | None:intergenic | 55.0% | |
| ! | CTTTTGCCTAACGCGCGACT+CGG | + | chr2_2:65488777-65488796 | None:intergenic | 55.0% |
| AGTCGCGCGTTAGGCAAAAG+CGG | - | chr2_2:65488777-65488796 | Msa0265260:intron | 55.0% | |
| ! | TACCGCGCCGCGTCAATTTT+TGG | - | chr2_2:65489148-65489167 | Msa0265260:intron | 55.0% |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | - | chr2_2:65489149-65489168 | Msa0265260:intron | 55.0% |
| GGCCACCCCAAAAATTGACG+CGG | + | chr2_2:65489158-65489177 | None:intergenic | 55.0% | |
| AATGGCACGTGCAGAAGGAG+TGG | + | chr2_2:65490311-65490330 | None:intergenic | 55.0% | |
| ! | GCACGTGCCATTGTAAGTGG+CGG | - | chr2_2:65490319-65490338 | Msa0265260:CDS | 55.0% |
| GTAAGTGGCGGTGTGCTATC+TGG | - | chr2_2:65490331-65490350 | Msa0265260:CDS | 55.0% | |
| GCTGGTGGTAAGCCAGAACT+TGG | + | chr2_2:65490430-65490449 | None:intergenic | 55.0% | |
| TCAGCACTCACAACAGCTGG+TGG | + | chr2_2:65490445-65490464 | None:intergenic | 55.0% | |
| CTCTCAGCACTCACAACAGC+TGG | + | chr2_2:65490448-65490467 | None:intergenic | 55.0% | |
| !! | GTGAGTGCTGAGAGACCATC+AGG | - | chr2_2:65490454-65490473 | Msa0265260:intron | 55.0% |
| GGGGAAGATGGTAGACATGC+TGG | - | chr2_2:65490712-65490731 | Msa0265260:intron | 55.0% | |
| AACCCTCTCTTCCTCTTGCC+AGG | - | chr2_2:65491521-65491540 | Msa0265260:intron | 55.0% | |
| ACCCTCTCTTCCTCTTGCCA+GGG | - | chr2_2:65491522-65491541 | Msa0265260:intron | 55.0% | |
| TCCCTGGCAAGAGGAAGAGA+GGG | + | chr2_2:65491526-65491545 | None:intergenic | 55.0% | |
| ATCCCTGGCAAGAGGAAGAG+AGG | + | chr2_2:65491527-65491546 | None:intergenic | 55.0% | |
| TCTCTTCCTCTTGCCAGGGA+TGG | - | chr2_2:65491526-65491545 | Msa0265260:intron | 55.0% | |
| TCCTCCCCTCAGGGTTGCTT+TGG | + | chr2_2:65486072-65486091 | None:intergenic | 60.0% | |
| ACTTCCTCATGGGTCTGGGG+AGG | - | chr2_2:65487784-65487803 | Msa0265260:CDS | 60.0% | |
| GGAACAAAAGCGGGTCAGCG+CGG | - | chr2_2:65488798-65488817 | Msa0265260:intron | 60.0% | |
| GAACAAAAGCGGGTCAGCGC+GGG | - | chr2_2:65488799-65488818 | Msa0265260:intron | 60.0% | |
| GGGCAAAAAGCGGGTCAACG+CGG | - | chr2_2:65488819-65488838 | Msa0265260:intron | 60.0% | |
| GGCAAAAAGCGGGTCAACGC+GGG | - | chr2_2:65488820-65488839 | Msa0265260:intron | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | - | chr2_2:65488830-65488849 | Msa0265260:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | - | chr2_2:65488831-65488850 | Msa0265260:intron | 60.0% | |
| ! | GCGGGCGCTTTTACATGACG+CGG | + | chr2_2:65489116-65489135 | None:intergenic | 60.0% |
| AATTGACGCGGCGCGGTAAG+CGG | + | chr2_2:65489146-65489165 | None:intergenic | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | + | chr2_2:65489153-65489172 | None:intergenic | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr2_2:65489150-65489169 | Msa0265260:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr2_2:65489153-65489172 | Msa0265260:intron | 60.0% |
| TGAGGGGTAGCCACGACACA+AGG | + | chr2_2:65489997-65490016 | None:intergenic | 60.0% | |
| ! | TCTGGTGCTGGGCCAAGTTC+TGG | - | chr2_2:65490415-65490434 | Msa0265260:intron | 60.0% |
| GGACTACCATCCCTGGCAAG+AGG | + | chr2_2:65491535-65491554 | None:intergenic | 60.0% | |
| CTTGCCAGGGATGGTAGTCC+TGG | - | chr2_2:65491535-65491554 | Msa0265260:intron | 60.0% | |
| TGCTCCAGGACTACCATCCC+TGG | + | chr2_2:65491542-65491561 | None:intergenic | 60.0% | |
| GCCAAAGCAACCCTGAGGGG+AGG | - | chr2_2:65486068-65486087 | Msa0265260:three_prime_UTR | 65.0% | |
| GGGTCAGCGCGGGCAAAAAG+CGG | - | chr2_2:65488809-65488828 | Msa0265260:intron | 65.0% | |
| GGTCAGCGCGGGCAAAAAGC+GGG | - | chr2_2:65488810-65488829 | Msa0265260:intron | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | + | chr2_2:65489145-65489164 | None:intergenic | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | + | chr2_2:65489184-65489203 | None:intergenic | 65.0% | |
| CTCGCCTCCCCAGACCCATG+AGG | + | chr2_2:65487791-65487810 | None:intergenic | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | - | chr2_2:65488711-65488730 | Msa0265260:intron | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | + | chr2_2:65488757-65488776 | None:intergenic | 70.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | - | chr2_2:65488768-65488787 | Msa0265260:intron | 70.0% | |
| ! | AACGCGGCGCGATCGCGGCG+CGG | - | chr2_2:65488716-65488735 | Msa0265260:intron | 80.0% |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | + | chr2_2:65489134-65489153 | None:intergenic | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | + | chr2_2:65489135-65489154 | None:intergenic | 80.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | + | chr2_2:65489179-65489198 | None:intergenic | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | - | chr2_2:65488721-65488740 | Msa0265260:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 65485953 | 65492140 | 65485953 | ID=Msa0265260;Name=Msa0265260 |
| chr2_2 | mRNA | 65485953 | 65492140 | 65485953 | ID=Msa0265260-mRNA-1;Parent=Msa0265260;Name=Msa0265260-mRNA-1;_AED=0.15;_eAED=0.15;_QI=359|1|1|1|1|1|14|417|475 |
| chr2_2 | exon | 65485953 | 65486666 | 65485953 | ID=Msa0265260-mRNA-1:exon:20641;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65487241 | 65487383 | 65487241 | ID=Msa0265260-mRNA-1:exon:20640;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65487618 | 65487681 | 65487618 | ID=Msa0265260-mRNA-1:exon:20639;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65487763 | 65487845 | 65487763 | ID=Msa0265260-mRNA-1:exon:20638;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65487974 | 65488100 | 65487974 | ID=Msa0265260-mRNA-1:exon:20637;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65488189 | 65488273 | 65488189 | ID=Msa0265260-mRNA-1:exon:20636;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65488358 | 65488421 | 65488358 | ID=Msa0265260-mRNA-1:exon:20635;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65488519 | 65488580 | 65488519 | ID=Msa0265260-mRNA-1:exon:20634;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65490107 | 65490177 | 65490107 | ID=Msa0265260-mRNA-1:exon:20633;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65490275 | 65490370 | 65490275 | ID=Msa0265260-mRNA-1:exon:20632;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65490455 | 65490603 | 65490455 | ID=Msa0265260-mRNA-1:exon:20631;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65490713 | 65490782 | 65490713 | ID=Msa0265260-mRNA-1:exon:20630;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65491563 | 65491603 | 65491563 | ID=Msa0265260-mRNA-1:exon:20629;Parent=Msa0265260-mRNA-1 |
| chr2_2 | exon | 65491706 | 65492140 | 65491706 | ID=Msa0265260-mRNA-1:exon:20628;Parent=Msa0265260-mRNA-1 |
| chr2_2 | five_prime_UTR | 65491782 | 65492140 | 65491782 | ID=Msa0265260-mRNA-1:five_prime_utr;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65491706 | 65491781 | 65491706 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65491563 | 65491603 | 65491563 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65490713 | 65490782 | 65490713 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65490455 | 65490603 | 65490455 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65490275 | 65490370 | 65490275 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65490107 | 65490177 | 65490107 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65488519 | 65488580 | 65488519 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65488358 | 65488421 | 65488358 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65488189 | 65488273 | 65488189 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65487974 | 65488100 | 65487974 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65487763 | 65487845 | 65487763 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65487618 | 65487681 | 65487618 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65487241 | 65487383 | 65487241 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | CDS | 65486370 | 65486666 | 65486370 | ID=Msa0265260-mRNA-1:cds;Parent=Msa0265260-mRNA-1 |
| chr2_2 | three_prime_UTR | 65485953 | 65486369 | 65485953 | ID=Msa0265260-mRNA-1:three_prime_utr;Parent=Msa0265260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
