Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232420 | XP_003593289.1 | 98.739 | 555 | 7 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232420 | sp|Q9FMU5|UTP18_ARATH | 62.478 | 565 | 183 | 11 | 1 | 555 | 1 | 546 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232420 | G7IS79 | 98.739 | 555 | 7 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1129 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0190240 | Msa0232420 | 0.911441 | 6.058381e-83 | -8.615850e-47 |
| Msa0232420 | Msa0272070 | 0.998632 | 3.974076e-271 | -8.615850e-47 |
| Msa0232420 | Msa0403710 | 0.809759 | 1.614334e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232420 | MtrunA17_Chr2g0331501 | 91.532 | 555 | 47 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1053 |
| Msa0232420 | MtrunA17_Chr2g0279781 | 91.532 | 555 | 6 | 1 | 1 | 555 | 1 | 514 | 0.0 | 1029 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232420 | AT5G14050.1 | 62.478 | 565 | 183 | 11 | 1 | 555 | 1 | 546 | 0.0 | 676 |
Find 114 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTATTCACCTCCTGAATT+TGG | 0.168421 | 2_2:-4699308 | Msa0232420:CDS |
| GACTGGGCGCAGCTGGATTC+AGG | 0.199184 | 2_2:-4698972 | Msa0232420:CDS |
| ATGGAACTGAACTGAATTAA+TGG | 0.221155 | 2_2:+4698749 | None:intergenic |
| GAGGATGAGGATTTGATATC+TGG | 0.277710 | 2_2:-4699050 | Msa0232420:CDS |
| TAGCCAAAGTCAACAGATTA+AGG | 0.291410 | 2_2:-4699088 | Msa0232420:CDS |
| CTGAGAAGTCAGCATCTTCT+TGG | 0.323321 | 2_2:+4699189 | None:intergenic |
| AAAGCTATCATTTGAGAATC+AGG | 0.336697 | 2_2:+4698459 | None:intergenic |
| AAGGAAGATACTTTCAATCT+TGG | 0.340340 | 2_2:+4698650 | None:intergenic |
| GAAGAGTATTGAAGTGTTTG+AGG | 0.342182 | 2_2:-4698487 | Msa0232420:CDS |
| AGATTATCAATGGTCTTGAT+AGG | 0.358024 | 2_2:+4698120 | None:intergenic |
| TACTTCAGGCATGGTGATAA+TGG | 0.362722 | 2_2:+4697863 | None:intergenic |
| GGTCAGCTGCTTCTTGCTGC+TGG | 0.365476 | 2_2:-4698720 | Msa0232420:CDS |
| TCAACAGATTAAGGAAGTTA+AGG | 0.371537 | 2_2:-4699079 | Msa0232420:CDS |
| AGGAACTGACTGGGCGCAGC+TGG | 0.391668 | 2_2:-4698979 | Msa0232420:CDS |
| GTTAAGGAAGGAGGAGGATG+AGG | 0.392451 | 2_2:-4699063 | Msa0232420:CDS |
| TGGGCTAAAATCAATACAAC+GGG | 0.399262 | 2_2:+4697945 | None:intergenic |
| TGGAACTGAACTGAATTAAT+GGG | 0.402013 | 2_2:+4698750 | None:intergenic |
| CTTCCTTAATCTGTTGACTT+TGG | 0.407960 | 2_2:+4699085 | None:intergenic |
| GGGTCTCATGTGATAATATC+AGG | 0.415547 | 2_2:-4698588 | Msa0232420:CDS |
| ATGGCTGTAGGAAATGCTTC+AGG | 0.420095 | 2_2:-4697910 | Msa0232420:CDS |
| TTATAGTCTTGATTTAGTTA+AGG | 0.420893 | 2_2:-4698550 | Msa0232420:CDS |
| TTCGAATGGGGCAATCTTCA+AGG | 0.424695 | 2_2:+4698631 | None:intergenic |
| TCAGTTCAGTTCCATCGAAA+TGG | 0.438541 | 2_2:-4698741 | Msa0232420:CDS |
| AAATACTAGCAATCTGTTCA+AGG | 0.442805 | 2_2:-4698056 | Msa0232420:CDS |
| TTCAGTATTCAGATTATCAA+TGG | 0.445525 | 2_2:+4698110 | None:intergenic |
| AATATACAAGATCCCGCTAA+TGG | 0.453091 | 2_2:-4698774 | Msa0232420:CDS |
| TACAATAGCGAGGAATTTCT+CGG | 0.460074 | 2_2:-4698156 | Msa0232420:CDS |
| GAGCCGAGGTTACGAGGATC+TGG | 0.461776 | 2_2:-4698889 | Msa0232420:CDS |
| GTAGATGAAGGCTGTTTAAA+CGG | 0.466326 | 2_2:-4698249 | Msa0232420:CDS |
| TCACCTCCTGAATTTGGAAA+GGG | 0.467907 | 2_2:-4699302 | Msa0232420:CDS |
| GCTGCAAAATGTGTCCCTAC+TGG | 0.467974 | 2_2:+4698207 | None:intergenic |
| AAGGCTAGAGTTGATAAGAT+TGG | 0.470242 | 2_2:-4698531 | Msa0232420:CDS |
| AGCTCAACCGAGGAACTGAC+TGG | 0.472580 | 2_2:-4698989 | Msa0232420:CDS |
| TGATGGTCATATTTACCATT+GGG | 0.474225 | 2_2:-4698304 | Msa0232420:CDS |
| GATAAGATTGGTCCGCTGTT+GGG | 0.475592 | 2_2:-4698519 | Msa0232420:CDS |
| ACTGGGCGCAGCTGGATTCA+GGG | 0.478998 | 2_2:-4698971 | Msa0232420:CDS |
| AAGCATCTTTCTTGCCCGAT+GGG | 0.479466 | 2_2:-4698608 | Msa0232420:CDS |
| TTTGCAGCTGGTTCAGCTAG+TGG | 0.484592 | 2_2:-4698192 | Msa0232420:CDS |
| GTGATGGTCATATTTACCAT+TGG | 0.489547 | 2_2:-4698305 | Msa0232420:CDS |
| AAGGAAGTTAAGGAAGGAGG+AGG | 0.489554 | 2_2:-4699069 | Msa0232420:CDS |
| AAAGCCGGTGTGGGTGGATG+AGG | 0.489666 | 2_2:-4699135 | Msa0232420:CDS |
| CAGAGTATGTGTCAAGATTG+AGG | 0.492768 | 2_2:-4699025 | Msa0232420:CDS |
| ACAAAGTCGAAGCAATTAGT+TGG | 0.498298 | 2_2:-4698402 | Msa0232420:CDS |
| ACAATAGCGAGGAATTTCTC+GGG | 0.503579 | 2_2:-4698155 | Msa0232420:CDS |
| AGAGTATGTGTCAAGATTGA+GGG | 0.513752 | 2_2:-4699024 | Msa0232420:CDS |
| GAATTAATGGGACCATTAGC+GGG | 0.514356 | 2_2:+4698762 | None:intergenic |
| TGATAAGATTGGTCCGCTGT+TGG | 0.514998 | 2_2:-4698520 | Msa0232420:CDS |
| GATTGGTCCGCTGTTGGGTA+GGG | 0.516250 | 2_2:-4698514 | Msa0232420:CDS |
| GGATGCCGCGGCTTCTGCAA+AGG | 0.518753 | 2_2:-4699264 | Msa0232420:CDS |
| GCTGCGCCCAGTCAGTTCCT+CGG | 0.520974 | 2_2:+4698982 | None:intergenic |
| TGAATTAATGGGACCATTAG+CGG | 0.525771 | 2_2:+4698761 | None:intergenic |
| ATTAAGGAAGTTAAGGAAGG+AGG | 0.530708 | 2_2:-4699072 | Msa0232420:CDS |
| GGTGGATGAGGAAGAAGAAA+AGG | 0.532095 | 2_2:-4699123 | Msa0232420:CDS |
| TTCGAGTATTCAAGATGTCC+TGG | 0.533881 | 2_2:+4698810 | None:intergenic |
| AAAGGAAATGAGGTTGAAGA+TGG | 0.535620 | 2_2:-4699452 | Msa0232420:CDS |
| AGATTGGTCCGCTGTTGGGT+AGG | 0.539038 | 2_2:-4698515 | Msa0232420:CDS |
| TTCACCTCCTGAATTTGGAA+AGG | 0.542160 | 2_2:-4699303 | Msa0232420:CDS |
| GCTCTTTGTACTTCTCCAGT+AGG | 0.543723 | 2_2:-4698222 | Msa0232420:CDS |
| AGATGGAAAGGAAGAACAGT+TGG | 0.550771 | 2_2:-4699384 | Msa0232420:CDS |
| TTGAGCTACTCTTCACAACC+AGG | 0.551752 | 2_2:+4698841 | None:intergenic |
| CAATACAACGGGGATAATGC+AGG | 0.553209 | 2_2:+4697956 | None:intergenic |
| AAAGAGGAAGCTAGATGGAA+AGG | 0.553316 | 2_2:-4699396 | Msa0232420:CDS |
| TGATAATCTGAATACTGAAG+TGG | 0.554817 | 2_2:-4698106 | Msa0232420:CDS |
| TTGTTAAGCGCTGGTGGTGA+TGG | 0.557212 | 2_2:-4698321 | Msa0232420:CDS |
| AAAGCATCTTTCTTGCCCGA+TGG | 0.557386 | 2_2:-4698609 | Msa0232420:CDS |
| TTCTTGCTGCTGGATTAGAC+CGG | 0.558175 | 2_2:-4698710 | Msa0232420:CDS |
| AAATGAGGTTGAAGATGGGA+AGG | 0.558756 | 2_2:-4699447 | Msa0232420:CDS |
| AAGGAAATGAGGTTGAAGAT+GGG | 0.562237 | 2_2:-4699451 | Msa0232420:CDS |
| AGTAGCTCAAAATTGTTGCC+AGG | 0.564255 | 2_2:-4698828 | Msa0232420:CDS |
| GGAGTTTGATGTTGATACTG+AGG | 0.566399 | 2_2:-4699426 | Msa0232420:CDS |
| CTCTTTGTACTTCTCCAGTA+GGG | 0.567092 | 2_2:-4698221 | Msa0232420:CDS |
| CAGATTAAGGAAGTTAAGGA+AGG | 0.571312 | 2_2:-4699075 | Msa0232420:CDS |
| ACCTCCTGAATTTGGAAAGG+GGG | 0.574743 | 2_2:-4699300 | Msa0232420:CDS |
| TGCTGTGAGCCGAGGTTACG+AGG | 0.576924 | 2_2:-4698895 | Msa0232420:CDS |
| CATCCAGATCCTCGTAACCT+CGG | 0.587962 | 2_2:+4698886 | None:intergenic |
| ATTATCACATGAGACCCATC+GGG | 0.588919 | 2_2:+4698594 | None:intergenic |
| AATACTAGCAATCTGTTCAA+GGG | 0.593971 | 2_2:-4698055 | Msa0232420:CDS |
| GGAAGTTGTGAAAGGAAATG+AGG | 0.594864 | 2_2:-4699462 | Msa0232420:CDS |
| TTTCTGATCTACTTCAGGCA+TGG | 0.600646 | 2_2:+4697854 | None:intergenic |
| TATTATCACATGAGACCCAT+CGG | 0.603056 | 2_2:+4698593 | None:intergenic |
| GAAGCAGCTGACCATTTCGA+TGG | 0.604108 | 2_2:+4698730 | None:intergenic |
| ATACACAAAGGTGTAGATGA+AGG | 0.605326 | 2_2:-4698261 | Msa0232420:CDS |
| CTTCAGTAAAAGCTAATGAA+CGG | 0.605560 | 2_2:+4698355 | None:intergenic |
| TGTGAATATTTACAATAGCG+AGG | 0.608077 | 2_2:-4698166 | Msa0232420:CDS |
| AAAAGGGAGGAAGTTGTGAA+AGG | 0.616065 | 2_2:-4699470 | Msa0232420:CDS |
| AATAAAGCTGCTGTGAGCCG+AGG | 0.616455 | 2_2:-4698903 | Msa0232420:CDS |
| AGAAGCCTTTGCAGAAGCCG+CGG | 0.617253 | 2_2:+4699259 | None:intergenic |
| TCTCAGAACAAATGAAGACC+TGG | 0.621951 | 2_2:-4698859 | Msa0232420:CDS |
| ACCATTGGGATCTGAGAACA+AGG | 0.623692 | 2_2:-4698290 | Msa0232420:CDS |
| CTGGGCTAAAATCAATACAA+CGG | 0.628701 | 2_2:+4697944 | None:intergenic |
| ACAGCCATAAAACCACCACC+TGG | 0.630227 | 2_2:+4697925 | None:intergenic |
| TGATGATGAGGTGGATGCCG+CGG | 0.633167 | 2_2:-4699276 | Msa0232420:CDS |
| AAAGGAAGAACAGTTGGCAA+AGG | 0.637301 | 2_2:-4699378 | Msa0232420:CDS |
| CACCTCCTGAATTTGGAAAG+GGG | 0.637398 | 2_2:-4699301 | Msa0232420:CDS |
| GCTCAACCGAGGAACTGACT+GGG | 0.639373 | 2_2:-4698988 | Msa0232420:CDS |
| CCAGTTAGAGAAAACAGTGT+AGG | 0.639938 | 2_2:+4697996 | None:intergenic |
| GTTGGTACTCTGAAGATGAA+CGG | 0.640176 | 2_2:-4698384 | Msa0232420:CDS |
| TTAGAGAAAACAGTGTAGGA+TGG | 0.640295 | 2_2:+4698000 | None:intergenic |
| CAATAGCGAGGAATTTCTCG+GGG | 0.640898 | 2_2:-4698154 | Msa0232420:CDS |
| GAAAAGAAAGCCGGTGTGGG+TGG | 0.643363 | 2_2:-4699141 | Msa0232420:CDS |
| TGCAGGCTCGCATTTGAACG+CGG | 0.645712 | 2_2:+4697973 | None:intergenic |
| TCTTCCTCATCCACCCACAC+CGG | 0.648855 | 2_2:+4699131 | None:intergenic |
| CTTTGAAAAGAAAGCCGGTG+TGG | 0.649038 | 2_2:-4699145 | Msa0232420:CDS |
| TTCTCTTCCCTACCCAACAG+CGG | 0.649632 | 2_2:+4698507 | None:intergenic |
| TGATGCTTTGAAAAGAAAGC+CGG | 0.651576 | 2_2:-4699150 | Msa0232420:CDS |
| CAGCCATAAAACCACCACCT+GGG | 0.668450 | 2_2:+4697926 | None:intergenic |
| CATCTTCTTGGTAAACAGTG+AGG | 0.681529 | 2_2:+4699201 | None:intergenic |
| TGAGGAGACTATCTGCAGAA+CGG | 0.693456 | 2_2:+4699219 | None:intergenic |
| TTTGAAAAGAAAGCCGGTGT+GGG | 0.693980 | 2_2:-4699144 | Msa0232420:CDS |
| ACAAGGACTTGTATACACAA+AGG | 0.694652 | 2_2:-4698273 | Msa0232420:CDS |
| CAGCATGCAAAGCTCAACCG+AGG | 0.712589 | 2_2:-4698999 | Msa0232420:CDS |
| TCCTTGTTCTCAGATCCCAA+TGG | 0.719029 | 2_2:+4698289 | None:intergenic |
| AATAGCGAGGAATTTCTCGG+GGG | 0.758971 | 2_2:-4698153 | Msa0232420:CDS |
| GGGCTAAAATCAATACAACG+GGG | 0.814054 | 2_2:+4697946 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAAATTTTTTCAAATTGA+TGG | - | chr2_2:4698695-4698714 | Msa0232420:CDS | 15.0% |
| !!! | CTTAAATTTTTTCAAATTGA+TGG | - | chr2_2:4698695-4698714 | Msa0232420:CDS | 15.0% |
| !! | TTTGAAAAAATTTAAGCTTC+CGG | + | chr2_2:4698691-4698710 | None:intergenic | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | - | chr2_2:4698829-4698848 | Msa0232420:CDS | 20.0% |
| !! | TTTGAAAAAATTTAAGCTTC+CGG | + | chr2_2:4698691-4698710 | None:intergenic | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | - | chr2_2:4698829-4698848 | Msa0232420:CDS | 20.0% |
| !!! | TTTTTCAAATTGATGGCAAA+CGG | - | chr2_2:4698702-4698721 | Msa0232420:CDS | 25.0% |
| !! | CAATGAAGGTTATATTTTAC+TGG | - | chr2_2:4698949-4698968 | Msa0232420:CDS | 25.0% |
| ! | TTCAGTATTCAGATTATCAA+TGG | + | chr2_2:4699272-4699291 | None:intergenic | 25.0% |
| !!! | TTTTTCAAATTGATGGCAAA+CGG | - | chr2_2:4698702-4698721 | Msa0232420:CDS | 25.0% |
| !! | CAATGAAGGTTATATTTTAC+TGG | - | chr2_2:4698949-4698968 | Msa0232420:CDS | 25.0% |
| ! | TTCAGTATTCAGATTATCAA+TGG | + | chr2_2:4699272-4699291 | None:intergenic | 25.0% |
| ! | CTCTAAAAATGAGACGAAAA+GGG | - | chr2_2:4697893-4697912 | Msa0232420:CDS | 30.0% |
| TCAACAGATTAAGGAAGTTA+AGG | - | chr2_2:4698300-4698319 | Msa0232420:CDS | 30.0% | |
| TGGAACTGAACTGAATTAAT+GGG | + | chr2_2:4698632-4698651 | None:intergenic | 30.0% | |
| ATGGAACTGAACTGAATTAA+TGG | + | chr2_2:4698633-4698652 | None:intergenic | 30.0% | |
| AAGGAAGATACTTTCAATCT+TGG | + | chr2_2:4698732-4698751 | None:intergenic | 30.0% | |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | + | chr2_2:4698764-4698783 | None:intergenic | 30.0% |
| AAAGCTATCATTTGAGAATC+AGG | + | chr2_2:4698923-4698942 | None:intergenic | 30.0% | |
| ! | TTCTCAAATGATAGCTTTTG+TGG | - | chr2_2:4698925-4698944 | Msa0232420:CDS | 30.0% |
| ! | TCTCAAATGATAGCTTTTGT+GGG | - | chr2_2:4698926-4698945 | Msa0232420:CDS | 30.0% |
| CTTCAGTAAAAGCTAATGAA+CGG | + | chr2_2:4699027-4699046 | None:intergenic | 30.0% | |
| !!! | TCATTAGCTTTTACTGAAGA+TGG | - | chr2_2:4699028-4699047 | Msa0232420:CDS | 30.0% |
| TGATGGTCATATTTACCATT+GGG | - | chr2_2:4699075-4699094 | Msa0232420:CDS | 30.0% | |
| TGTGAATATTTACAATAGCG+AGG | - | chr2_2:4699213-4699232 | Msa0232420:CDS | 30.0% | |
| ! | AGATTATCAATGGTCTTGAT+AGG | + | chr2_2:4699262-4699281 | None:intergenic | 30.0% |
| TGATAATCTGAATACTGAAG+TGG | - | chr2_2:4699273-4699292 | Msa0232420:CDS | 30.0% | |
| AAATACTAGCAATCTGTTCA+AGG | - | chr2_2:4699323-4699342 | Msa0232420:CDS | 30.0% | |
| AATACTAGCAATCTGTTCAA+GGG | - | chr2_2:4699324-4699343 | Msa0232420:CDS | 30.0% | |
| ! | CTCTAAAAATGAGACGAAAA+GGG | - | chr2_2:4697893-4697912 | Msa0232420:CDS | 30.0% |
| TCAACAGATTAAGGAAGTTA+AGG | - | chr2_2:4698300-4698319 | Msa0232420:CDS | 30.0% | |
| TGGAACTGAACTGAATTAAT+GGG | + | chr2_2:4698632-4698651 | None:intergenic | 30.0% | |
| ATGGAACTGAACTGAATTAA+TGG | + | chr2_2:4698633-4698652 | None:intergenic | 30.0% | |
| AAGGAAGATACTTTCAATCT+TGG | + | chr2_2:4698732-4698751 | None:intergenic | 30.0% | |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | + | chr2_2:4698764-4698783 | None:intergenic | 30.0% |
| AAAGCTATCATTTGAGAATC+AGG | + | chr2_2:4698923-4698942 | None:intergenic | 30.0% | |
| ! | TTCTCAAATGATAGCTTTTG+TGG | - | chr2_2:4698925-4698944 | Msa0232420:CDS | 30.0% |
| ! | TCTCAAATGATAGCTTTTGT+GGG | - | chr2_2:4698926-4698945 | Msa0232420:CDS | 30.0% |
| CTTCAGTAAAAGCTAATGAA+CGG | + | chr2_2:4699027-4699046 | None:intergenic | 30.0% | |
| !!! | TCATTAGCTTTTACTGAAGA+TGG | - | chr2_2:4699028-4699047 | Msa0232420:CDS | 30.0% |
| TGATGGTCATATTTACCATT+GGG | - | chr2_2:4699075-4699094 | Msa0232420:CDS | 30.0% | |
| TGTGAATATTTACAATAGCG+AGG | - | chr2_2:4699213-4699232 | Msa0232420:CDS | 30.0% | |
| ! | AGATTATCAATGGTCTTGAT+AGG | + | chr2_2:4699262-4699281 | None:intergenic | 30.0% |
| TGATAATCTGAATACTGAAG+TGG | - | chr2_2:4699273-4699292 | Msa0232420:CDS | 30.0% | |
| AAATACTAGCAATCTGTTCA+AGG | - | chr2_2:4699323-4699342 | Msa0232420:CDS | 30.0% | |
| AATACTAGCAATCTGTTCAA+GGG | - | chr2_2:4699324-4699343 | Msa0232420:CDS | 30.0% | |
| !! | GCTCTAAAAATGAGACGAAA+AGG | - | chr2_2:4697892-4697911 | Msa0232420:CDS | 35.0% |
| TAAAAATGAGACGAAAAGGG+AGG | - | chr2_2:4697896-4697915 | Msa0232420:CDS | 35.0% | |
| AAAGGAAATGAGGTTGAAGA+TGG | - | chr2_2:4697927-4697946 | Msa0232420:CDS | 35.0% | |
| AAGGAAATGAGGTTGAAGAT+GGG | - | chr2_2:4697928-4697947 | Msa0232420:CDS | 35.0% | |
| ATACTGAGGAAACGAAAAAG+AGG | - | chr2_2:4697967-4697986 | Msa0232420:CDS | 35.0% | |
| ! | AAGCTTGAGAGCTTTTTGTT+TGG | - | chr2_2:4698044-4698063 | Msa0232420:CDS | 35.0% |
| !! | AGCTTGAGAGCTTTTTGTTT+GGG | - | chr2_2:4698045-4698064 | Msa0232420:CDS | 35.0% |
| !! | TGATGCTTTGAAAAGAAAGC+CGG | - | chr2_2:4698229-4698248 | Msa0232420:CDS | 35.0% |
| TAGCCAAAGTCAACAGATTA+AGG | - | chr2_2:4698291-4698310 | Msa0232420:CDS | 35.0% | |
| !! | CTTCCTTAATCTGTTGACTT+TGG | + | chr2_2:4698297-4698316 | None:intergenic | 35.0% |
| CAGATTAAGGAAGTTAAGGA+AGG | - | chr2_2:4698304-4698323 | Msa0232420:CDS | 35.0% | |
| ATTAAGGAAGTTAAGGAAGG+AGG | - | chr2_2:4698307-4698326 | Msa0232420:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | - | chr2_2:4698355-4698374 | Msa0232420:CDS | 35.0% | |
| AATATACAAGATCCCGCTAA+TGG | - | chr2_2:4698605-4698624 | Msa0232420:CDS | 35.0% | |
| TGAATTAATGGGACCATTAG+CGG | + | chr2_2:4698621-4698640 | None:intergenic | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | + | chr2_2:4698763-4698782 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | + | chr2_2:4698765-4698784 | None:intergenic | 35.0% |
| TATTATCACATGAGACCCAT+CGG | + | chr2_2:4698789-4698808 | None:intergenic | 35.0% | |
| !! | AAGGCTAGAGTTGATAAGAT+TGG | - | chr2_2:4698848-4698867 | Msa0232420:CDS | 35.0% |
| !! | GAAGAGTATTGAAGTGTTTG+AGG | - | chr2_2:4698892-4698911 | Msa0232420:CDS | 35.0% |
| ACAAAGTCGAAGCAATTAGT+TGG | - | chr2_2:4698977-4698996 | Msa0232420:CDS | 35.0% | |
| GTGATGGTCATATTTACCAT+TGG | - | chr2_2:4699074-4699093 | Msa0232420:CDS | 35.0% | |
| ACAAGGACTTGTATACACAA+AGG | - | chr2_2:4699106-4699125 | Msa0232420:CDS | 35.0% | |
| ! | ATACACAAAGGTGTAGATGA+AGG | - | chr2_2:4699118-4699137 | Msa0232420:CDS | 35.0% |
| GTAGATGAAGGCTGTTTAAA+CGG | - | chr2_2:4699130-4699149 | Msa0232420:CDS | 35.0% | |
| TACAATAGCGAGGAATTTCT+CGG | - | chr2_2:4699223-4699242 | Msa0232420:CDS | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | + | chr2_2:4699382-4699401 | None:intergenic | 35.0% | |
| TGGGCTAAAATCAATACAAC+GGG | + | chr2_2:4699437-4699456 | None:intergenic | 35.0% | |
| CTGGGCTAAAATCAATACAA+CGG | + | chr2_2:4699438-4699457 | None:intergenic | 35.0% | |
| !! | GCTCTAAAAATGAGACGAAA+AGG | - | chr2_2:4697892-4697911 | Msa0232420:CDS | 35.0% |
| TAAAAATGAGACGAAAAGGG+AGG | - | chr2_2:4697896-4697915 | Msa0232420:CDS | 35.0% | |
| AAAGGAAATGAGGTTGAAGA+TGG | - | chr2_2:4697927-4697946 | Msa0232420:CDS | 35.0% | |
| AAGGAAATGAGGTTGAAGAT+GGG | - | chr2_2:4697928-4697947 | Msa0232420:CDS | 35.0% | |
| ATACTGAGGAAACGAAAAAG+AGG | - | chr2_2:4697967-4697986 | Msa0232420:CDS | 35.0% | |
| ! | AAGCTTGAGAGCTTTTTGTT+TGG | - | chr2_2:4698044-4698063 | Msa0232420:CDS | 35.0% |
| !! | AGCTTGAGAGCTTTTTGTTT+GGG | - | chr2_2:4698045-4698064 | Msa0232420:CDS | 35.0% |
| !! | TGATGCTTTGAAAAGAAAGC+CGG | - | chr2_2:4698229-4698248 | Msa0232420:CDS | 35.0% |
| TAGCCAAAGTCAACAGATTA+AGG | - | chr2_2:4698291-4698310 | Msa0232420:CDS | 35.0% | |
| !! | CTTCCTTAATCTGTTGACTT+TGG | + | chr2_2:4698297-4698316 | None:intergenic | 35.0% |
| CAGATTAAGGAAGTTAAGGA+AGG | - | chr2_2:4698304-4698323 | Msa0232420:CDS | 35.0% | |
| ATTAAGGAAGTTAAGGAAGG+AGG | - | chr2_2:4698307-4698326 | Msa0232420:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | - | chr2_2:4698355-4698374 | Msa0232420:CDS | 35.0% | |
| AATATACAAGATCCCGCTAA+TGG | - | chr2_2:4698605-4698624 | Msa0232420:CDS | 35.0% | |
| TGAATTAATGGGACCATTAG+CGG | + | chr2_2:4698621-4698640 | None:intergenic | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | + | chr2_2:4698763-4698782 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | + | chr2_2:4698765-4698784 | None:intergenic | 35.0% |
| TATTATCACATGAGACCCAT+CGG | + | chr2_2:4698789-4698808 | None:intergenic | 35.0% | |
| !! | AAGGCTAGAGTTGATAAGAT+TGG | - | chr2_2:4698848-4698867 | Msa0232420:CDS | 35.0% |
| !! | GAAGAGTATTGAAGTGTTTG+AGG | - | chr2_2:4698892-4698911 | Msa0232420:CDS | 35.0% |
| ACAAAGTCGAAGCAATTAGT+TGG | - | chr2_2:4698977-4698996 | Msa0232420:CDS | 35.0% | |
| GTGATGGTCATATTTACCAT+TGG | - | chr2_2:4699074-4699093 | Msa0232420:CDS | 35.0% | |
| ACAAGGACTTGTATACACAA+AGG | - | chr2_2:4699106-4699125 | Msa0232420:CDS | 35.0% | |
| ! | ATACACAAAGGTGTAGATGA+AGG | - | chr2_2:4699118-4699137 | Msa0232420:CDS | 35.0% |
| GTAGATGAAGGCTGTTTAAA+CGG | - | chr2_2:4699130-4699149 | Msa0232420:CDS | 35.0% | |
| TACAATAGCGAGGAATTTCT+CGG | - | chr2_2:4699223-4699242 | Msa0232420:CDS | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | + | chr2_2:4699382-4699401 | None:intergenic | 35.0% | |
| TGGGCTAAAATCAATACAAC+GGG | + | chr2_2:4699437-4699456 | None:intergenic | 35.0% | |
| CTGGGCTAAAATCAATACAA+CGG | + | chr2_2:4699438-4699457 | None:intergenic | 35.0% | |
| AAAAGGGAGGAAGTTGTGAA+AGG | - | chr2_2:4697909-4697928 | Msa0232420:CDS | 40.0% | |
| GGAAGTTGTGAAAGGAAATG+AGG | - | chr2_2:4697917-4697936 | Msa0232420:CDS | 40.0% | |
| AAATGAGGTTGAAGATGGGA+AGG | - | chr2_2:4697932-4697951 | Msa0232420:CDS | 40.0% | |
| GGAGTTTGATGTTGATACTG+AGG | - | chr2_2:4697953-4697972 | Msa0232420:CDS | 40.0% | |
| ACGAAAAAGAGGAAGCTAGA+TGG | - | chr2_2:4697978-4697997 | Msa0232420:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | - | chr2_2:4697983-4698002 | Msa0232420:CDS | 40.0% | |
| AGATGGAAAGGAAGAACAGT+TGG | - | chr2_2:4697995-4698014 | Msa0232420:CDS | 40.0% | |
| AAAGGAAGAACAGTTGGCAA+AGG | - | chr2_2:4698001-4698020 | Msa0232420:CDS | 40.0% | |
| CTCTATTCACCTCCTGAATT+TGG | - | chr2_2:4698071-4698090 | Msa0232420:CDS | 40.0% | |
| TTCACCTCCTGAATTTGGAA+AGG | - | chr2_2:4698076-4698095 | Msa0232420:CDS | 40.0% | |
| TCACCTCCTGAATTTGGAAA+GGG | - | chr2_2:4698077-4698096 | Msa0232420:CDS | 40.0% | |
| CATCTTCTTGGTAAACAGTG+AGG | + | chr2_2:4698181-4698200 | None:intergenic | 40.0% | |
| TTTGAAAAGAAAGCCGGTGT+GGG | - | chr2_2:4698235-4698254 | Msa0232420:CDS | 40.0% | |
| GAGGATGAGGATTTGATATC+TGG | - | chr2_2:4698329-4698348 | Msa0232420:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | - | chr2_2:4698354-4698373 | Msa0232420:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | - | chr2_2:4698422-4698441 | Msa0232420:CDS | 40.0% | |
| TCTCAGAACAAATGAAGACC+TGG | - | chr2_2:4698520-4698539 | Msa0232420:CDS | 40.0% | |
| AGTAGCTCAAAATTGTTGCC+AGG | - | chr2_2:4698551-4698570 | Msa0232420:CDS | 40.0% | |
| TTCGAGTATTCAAGATGTCC+TGG | + | chr2_2:4698572-4698591 | None:intergenic | 40.0% | |
| GAATTAATGGGACCATTAGC+GGG | + | chr2_2:4698620-4698639 | None:intergenic | 40.0% | |
| TCAGTTCAGTTCCATCGAAA+TGG | - | chr2_2:4698638-4698657 | Msa0232420:CDS | 40.0% | |
| ATTATCACATGAGACCCATC+GGG | + | chr2_2:4698788-4698807 | None:intergenic | 40.0% | |
| GGGTCTCATGTGATAATATC+AGG | - | chr2_2:4698791-4698810 | Msa0232420:CDS | 40.0% | |
| ! | ATAGCTTTTGTGGGCAATGA+AGG | - | chr2_2:4698935-4698954 | Msa0232420:CDS | 40.0% |
| ! | GTTGGTACTCTGAAGATGAA+CGG | - | chr2_2:4698995-4699014 | Msa0232420:CDS | 40.0% |
| GGACAAAAATTGTTAAGCGC+TGG | - | chr2_2:4699049-4699068 | Msa0232420:CDS | 40.0% | |
| !! | CAAAAATTGTTAAGCGCTGG+TGG | - | chr2_2:4699052-4699071 | Msa0232420:CDS | 40.0% |
| CTCTTTGTACTTCTCCAGTA+GGG | - | chr2_2:4699158-4699177 | Msa0232420:CDS | 40.0% | |
| ACAATAGCGAGGAATTTCTC+GGG | - | chr2_2:4699224-4699243 | Msa0232420:CDS | 40.0% | |
| CCAGTTAGAGAAAACAGTGT+AGG | + | chr2_2:4699386-4699405 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | - | chr2_2:4699383-4699402 | Msa0232420:CDS | 40.0% |
| GGGCTAAAATCAATACAACG+GGG | + | chr2_2:4699436-4699455 | None:intergenic | 40.0% | |
| !!! | CGTTGTATTGATTTTAGCCC+AGG | - | chr2_2:4699436-4699455 | Msa0232420:CDS | 40.0% |
| !!! | TGTATTGATTTTAGCCCAGG+TGG | - | chr2_2:4699439-4699458 | Msa0232420:CDS | 40.0% |
| AAAAGGGAGGAAGTTGTGAA+AGG | - | chr2_2:4697909-4697928 | Msa0232420:CDS | 40.0% | |
| GGAAGTTGTGAAAGGAAATG+AGG | - | chr2_2:4697917-4697936 | Msa0232420:CDS | 40.0% | |
| AAATGAGGTTGAAGATGGGA+AGG | - | chr2_2:4697932-4697951 | Msa0232420:CDS | 40.0% | |
| GGAGTTTGATGTTGATACTG+AGG | - | chr2_2:4697953-4697972 | Msa0232420:CDS | 40.0% | |
| ACGAAAAAGAGGAAGCTAGA+TGG | - | chr2_2:4697978-4697997 | Msa0232420:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | - | chr2_2:4697983-4698002 | Msa0232420:CDS | 40.0% | |
| AGATGGAAAGGAAGAACAGT+TGG | - | chr2_2:4697995-4698014 | Msa0232420:CDS | 40.0% | |
| AAAGGAAGAACAGTTGGCAA+AGG | - | chr2_2:4698001-4698020 | Msa0232420:CDS | 40.0% | |
| CTCTATTCACCTCCTGAATT+TGG | - | chr2_2:4698071-4698090 | Msa0232420:CDS | 40.0% | |
| TTCACCTCCTGAATTTGGAA+AGG | - | chr2_2:4698076-4698095 | Msa0232420:CDS | 40.0% | |
| TCACCTCCTGAATTTGGAAA+GGG | - | chr2_2:4698077-4698096 | Msa0232420:CDS | 40.0% | |
| CATCTTCTTGGTAAACAGTG+AGG | + | chr2_2:4698181-4698200 | None:intergenic | 40.0% | |
| TTTGAAAAGAAAGCCGGTGT+GGG | - | chr2_2:4698235-4698254 | Msa0232420:CDS | 40.0% | |
| GAGGATGAGGATTTGATATC+TGG | - | chr2_2:4698329-4698348 | Msa0232420:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | - | chr2_2:4698354-4698373 | Msa0232420:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | - | chr2_2:4698422-4698441 | Msa0232420:CDS | 40.0% | |
| TCTCAGAACAAATGAAGACC+TGG | - | chr2_2:4698520-4698539 | Msa0232420:CDS | 40.0% | |
| AGTAGCTCAAAATTGTTGCC+AGG | - | chr2_2:4698551-4698570 | Msa0232420:CDS | 40.0% | |
| TTCGAGTATTCAAGATGTCC+TGG | + | chr2_2:4698572-4698591 | None:intergenic | 40.0% | |
| GAATTAATGGGACCATTAGC+GGG | + | chr2_2:4698620-4698639 | None:intergenic | 40.0% | |
| TCAGTTCAGTTCCATCGAAA+TGG | - | chr2_2:4698638-4698657 | Msa0232420:CDS | 40.0% | |
| ATTATCACATGAGACCCATC+GGG | + | chr2_2:4698788-4698807 | None:intergenic | 40.0% | |
| GGGTCTCATGTGATAATATC+AGG | - | chr2_2:4698791-4698810 | Msa0232420:CDS | 40.0% | |
| ! | ATAGCTTTTGTGGGCAATGA+AGG | - | chr2_2:4698935-4698954 | Msa0232420:CDS | 40.0% |
| ! | GTTGGTACTCTGAAGATGAA+CGG | - | chr2_2:4698995-4699014 | Msa0232420:CDS | 40.0% |
| GGACAAAAATTGTTAAGCGC+TGG | - | chr2_2:4699049-4699068 | Msa0232420:CDS | 40.0% | |
| !! | CAAAAATTGTTAAGCGCTGG+TGG | - | chr2_2:4699052-4699071 | Msa0232420:CDS | 40.0% |
| CTCTTTGTACTTCTCCAGTA+GGG | - | chr2_2:4699158-4699177 | Msa0232420:CDS | 40.0% | |
| ACAATAGCGAGGAATTTCTC+GGG | - | chr2_2:4699224-4699243 | Msa0232420:CDS | 40.0% | |
| CCAGTTAGAGAAAACAGTGT+AGG | + | chr2_2:4699386-4699405 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | - | chr2_2:4699383-4699402 | Msa0232420:CDS | 40.0% |
| GGGCTAAAATCAATACAACG+GGG | + | chr2_2:4699436-4699455 | None:intergenic | 40.0% | |
| !!! | CGTTGTATTGATTTTAGCCC+AGG | - | chr2_2:4699436-4699455 | Msa0232420:CDS | 40.0% |
| !!! | TGTATTGATTTTAGCCCAGG+TGG | - | chr2_2:4699439-4699458 | Msa0232420:CDS | 40.0% |
| CACCTCCTGAATTTGGAAAG+GGG | - | chr2_2:4698078-4698097 | Msa0232420:CDS | 45.0% | |
| ACCTCCTGAATTTGGAAAGG+GGG | - | chr2_2:4698079-4698098 | Msa0232420:CDS | 45.0% | |
| TCATCCCCCTTTCCAAATTC+AGG | + | chr2_2:4698086-4698105 | None:intergenic | 45.0% | |
| TGAGGAGACTATCTGCAGAA+CGG | + | chr2_2:4698163-4698182 | None:intergenic | 45.0% | |
| CTGAGAAGTCAGCATCTTCT+TGG | + | chr2_2:4698193-4698212 | None:intergenic | 45.0% | |
| ! | CTTTGAAAAGAAAGCCGGTG+TGG | - | chr2_2:4698234-4698253 | Msa0232420:CDS | 45.0% |
| GGTGGATGAGGAAGAAGAAA+AGG | - | chr2_2:4698256-4698275 | Msa0232420:CDS | 45.0% | |
| AAGGAAGTTAAGGAAGGAGG+AGG | - | chr2_2:4698310-4698329 | Msa0232420:CDS | 45.0% | |
| GCTGGATTCAGGGTCAAAAA+TGG | - | chr2_2:4698418-4698437 | Msa0232420:CDS | 45.0% | |
| TTGAGCTACTCTTCACAACC+AGG | + | chr2_2:4698541-4698560 | None:intergenic | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | - | chr2_2:4698669-4698688 | Msa0232420:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | + | chr2_2:4698751-4698770 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | - | chr2_2:4698770-4698789 | Msa0232420:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | - | chr2_2:4698771-4698790 | Msa0232420:CDS | 45.0% | |
| ! | TGATAAGATTGGTCCGCTGT+TGG | - | chr2_2:4698859-4698878 | Msa0232420:CDS | 45.0% |
| ! | GATAAGATTGGTCCGCTGTT+GGG | - | chr2_2:4698860-4698879 | Msa0232420:CDS | 45.0% |
| ACCATTGGGATCTGAGAACA+AGG | - | chr2_2:4699089-4699108 | Msa0232420:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | + | chr2_2:4699093-4699112 | None:intergenic | 45.0% | |
| GCTCTTTGTACTTCTCCAGT+AGG | - | chr2_2:4699157-4699176 | Msa0232420:CDS | 45.0% | |
| CAATAGCGAGGAATTTCTCG+GGG | - | chr2_2:4699225-4699244 | Msa0232420:CDS | 45.0% | |
| AATAGCGAGGAATTTCTCGG+GGG | - | chr2_2:4699226-4699245 | Msa0232420:CDS | 45.0% | |
| CAATACAACGGGGATAATGC+AGG | + | chr2_2:4699426-4699445 | None:intergenic | 45.0% | |
| !! | ATTGATTTTAGCCCAGGTGG+TGG | - | chr2_2:4699442-4699461 | Msa0232420:CDS | 45.0% |
| ATGGCTGTAGGAAATGCTTC+AGG | - | chr2_2:4699469-4699488 | Msa0232420:CDS | 45.0% | |
| CACCTCCTGAATTTGGAAAG+GGG | - | chr2_2:4698078-4698097 | Msa0232420:CDS | 45.0% | |
| ACCTCCTGAATTTGGAAAGG+GGG | - | chr2_2:4698079-4698098 | Msa0232420:CDS | 45.0% | |
| TCATCCCCCTTTCCAAATTC+AGG | + | chr2_2:4698086-4698105 | None:intergenic | 45.0% | |
| TGAGGAGACTATCTGCAGAA+CGG | + | chr2_2:4698163-4698182 | None:intergenic | 45.0% | |
| CTGAGAAGTCAGCATCTTCT+TGG | + | chr2_2:4698193-4698212 | None:intergenic | 45.0% | |
| ! | CTTTGAAAAGAAAGCCGGTG+TGG | - | chr2_2:4698234-4698253 | Msa0232420:CDS | 45.0% |
| GGTGGATGAGGAAGAAGAAA+AGG | - | chr2_2:4698256-4698275 | Msa0232420:CDS | 45.0% | |
| AAGGAAGTTAAGGAAGGAGG+AGG | - | chr2_2:4698310-4698329 | Msa0232420:CDS | 45.0% | |
| GCTGGATTCAGGGTCAAAAA+TGG | - | chr2_2:4698418-4698437 | Msa0232420:CDS | 45.0% | |
| TTGAGCTACTCTTCACAACC+AGG | + | chr2_2:4698541-4698560 | None:intergenic | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | - | chr2_2:4698669-4698688 | Msa0232420:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | + | chr2_2:4698751-4698770 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | - | chr2_2:4698770-4698789 | Msa0232420:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | - | chr2_2:4698771-4698790 | Msa0232420:CDS | 45.0% | |
| ! | TGATAAGATTGGTCCGCTGT+TGG | - | chr2_2:4698859-4698878 | Msa0232420:CDS | 45.0% |
| ! | GATAAGATTGGTCCGCTGTT+GGG | - | chr2_2:4698860-4698879 | Msa0232420:CDS | 45.0% |
| ACCATTGGGATCTGAGAACA+AGG | - | chr2_2:4699089-4699108 | Msa0232420:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | + | chr2_2:4699093-4699112 | None:intergenic | 45.0% | |
| GCTCTTTGTACTTCTCCAGT+AGG | - | chr2_2:4699157-4699176 | Msa0232420:CDS | 45.0% | |
| CAATAGCGAGGAATTTCTCG+GGG | - | chr2_2:4699225-4699244 | Msa0232420:CDS | 45.0% | |
| AATAGCGAGGAATTTCTCGG+GGG | - | chr2_2:4699226-4699245 | Msa0232420:CDS | 45.0% | |
| CAATACAACGGGGATAATGC+AGG | + | chr2_2:4699426-4699445 | None:intergenic | 45.0% | |
| !! | ATTGATTTTAGCCCAGGTGG+TGG | - | chr2_2:4699442-4699461 | Msa0232420:CDS | 45.0% |
| ATGGCTGTAGGAAATGCTTC+AGG | - | chr2_2:4699469-4699488 | Msa0232420:CDS | 45.0% | |
| TCCCCCTTTCCAAATTCAGG+AGG | + | chr2_2:4698083-4698102 | None:intergenic | 50.0% | |
| ! | TGGAAAGGGGGATGATGATG+AGG | - | chr2_2:4698091-4698110 | Msa0232420:CDS | 50.0% |
| ! | AAAGGGGGATGATGATGAGG+TGG | - | chr2_2:4698094-4698113 | Msa0232420:CDS | 50.0% |
| GTTAAGGAAGGAGGAGGATG+AGG | - | chr2_2:4698316-4698335 | Msa0232420:CDS | 50.0% | |
| AATAAAGCTGCTGTGAGCCG+AGG | - | chr2_2:4698476-4698495 | Msa0232420:CDS | 50.0% | |
| CATCCAGATCCTCGTAACCT+CGG | + | chr2_2:4698496-4698515 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | + | chr2_2:4698652-4698671 | None:intergenic | 50.0% | |
| TTCTCTTCCCTACCCAACAG+CGG | + | chr2_2:4698875-4698894 | None:intergenic | 50.0% | |
| !! | TTGTTAAGCGCTGGTGGTGA+TGG | - | chr2_2:4699058-4699077 | Msa0232420:CDS | 50.0% |
| GCTGCAAAATGTGTCCCTAC+TGG | + | chr2_2:4699175-4699194 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | - | chr2_2:4699175-4699194 | Msa0232420:CDS | 50.0% |
| ! | TTTGCAGCTGGTTCAGCTAG+TGG | - | chr2_2:4699187-4699206 | Msa0232420:CDS | 50.0% |
| !! | TAGCCCAGGTGGTGGTTTTA+TGG | - | chr2_2:4699450-4699469 | Msa0232420:CDS | 50.0% |
| CAGCCATAAAACCACCACCT+GGG | + | chr2_2:4699456-4699475 | None:intergenic | 50.0% | |
| ACAGCCATAAAACCACCACC+TGG | + | chr2_2:4699457-4699476 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | - | chr2_2:4699457-4699476 | Msa0232420:CDS | 50.0% |
| TCCCCCTTTCCAAATTCAGG+AGG | + | chr2_2:4698083-4698102 | None:intergenic | 50.0% | |
| ! | TGGAAAGGGGGATGATGATG+AGG | - | chr2_2:4698091-4698110 | Msa0232420:CDS | 50.0% |
| ! | AAAGGGGGATGATGATGAGG+TGG | - | chr2_2:4698094-4698113 | Msa0232420:CDS | 50.0% |
| GTTAAGGAAGGAGGAGGATG+AGG | - | chr2_2:4698316-4698335 | Msa0232420:CDS | 50.0% | |
| AATAAAGCTGCTGTGAGCCG+AGG | - | chr2_2:4698476-4698495 | Msa0232420:CDS | 50.0% | |
| CATCCAGATCCTCGTAACCT+CGG | + | chr2_2:4698496-4698515 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | + | chr2_2:4698652-4698671 | None:intergenic | 50.0% | |
| TTCTCTTCCCTACCCAACAG+CGG | + | chr2_2:4698875-4698894 | None:intergenic | 50.0% | |
| !! | TTGTTAAGCGCTGGTGGTGA+TGG | - | chr2_2:4699058-4699077 | Msa0232420:CDS | 50.0% |
| GCTGCAAAATGTGTCCCTAC+TGG | + | chr2_2:4699175-4699194 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | - | chr2_2:4699175-4699194 | Msa0232420:CDS | 50.0% |
| ! | TTTGCAGCTGGTTCAGCTAG+TGG | - | chr2_2:4699187-4699206 | Msa0232420:CDS | 50.0% |
| !! | TAGCCCAGGTGGTGGTTTTA+TGG | - | chr2_2:4699450-4699469 | Msa0232420:CDS | 50.0% |
| CAGCCATAAAACCACCACCT+GGG | + | chr2_2:4699456-4699475 | None:intergenic | 50.0% | |
| ACAGCCATAAAACCACCACC+TGG | + | chr2_2:4699457-4699476 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | - | chr2_2:4699457-4699476 | Msa0232420:CDS | 50.0% |
| ! | TGATGATGAGGTGGATGCCG+CGG | - | chr2_2:4698103-4698122 | Msa0232420:CDS | 55.0% |
| AGAAGCCTTTGCAGAAGCCG+CGG | + | chr2_2:4698123-4698142 | None:intergenic | 55.0% | |
| GAAAAGAAAGCCGGTGTGGG+TGG | - | chr2_2:4698238-4698257 | Msa0232420:CDS | 55.0% | |
| TCTTCCTCATCCACCCACAC+CGG | + | chr2_2:4698251-4698270 | None:intergenic | 55.0% | |
| CAGCATGCAAAGCTCAACCG+AGG | - | chr2_2:4698380-4698399 | Msa0232420:CDS | 55.0% | |
| AGCTCAACCGAGGAACTGAC+TGG | - | chr2_2:4698390-4698409 | Msa0232420:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | - | chr2_2:4698391-4698410 | Msa0232420:CDS | 55.0% | |
| ! | AGATTGGTCCGCTGTTGGGT+AGG | - | chr2_2:4698864-4698883 | Msa0232420:CDS | 55.0% |
| ! | GATTGGTCCGCTGTTGGGTA+GGG | - | chr2_2:4698865-4698884 | Msa0232420:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | + | chr2_2:4699409-4699428 | None:intergenic | 55.0% | |
| ! | TGATGATGAGGTGGATGCCG+CGG | - | chr2_2:4698103-4698122 | Msa0232420:CDS | 55.0% |
| AGAAGCCTTTGCAGAAGCCG+CGG | + | chr2_2:4698123-4698142 | None:intergenic | 55.0% | |
| GAAAAGAAAGCCGGTGTGGG+TGG | - | chr2_2:4698238-4698257 | Msa0232420:CDS | 55.0% | |
| TCTTCCTCATCCACCCACAC+CGG | + | chr2_2:4698251-4698270 | None:intergenic | 55.0% | |
| CAGCATGCAAAGCTCAACCG+AGG | - | chr2_2:4698380-4698399 | Msa0232420:CDS | 55.0% | |
| AGCTCAACCGAGGAACTGAC+TGG | - | chr2_2:4698390-4698409 | Msa0232420:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | - | chr2_2:4698391-4698410 | Msa0232420:CDS | 55.0% | |
| ! | AGATTGGTCCGCTGTTGGGT+AGG | - | chr2_2:4698864-4698883 | Msa0232420:CDS | 55.0% |
| ! | GATTGGTCCGCTGTTGGGTA+GGG | - | chr2_2:4698865-4698884 | Msa0232420:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | + | chr2_2:4699409-4699428 | None:intergenic | 55.0% | |
| AAAGCCGGTGTGGGTGGATG+AGG | - | chr2_2:4698244-4698263 | Msa0232420:CDS | 60.0% | |
| ACTGGGCGCAGCTGGATTCA+GGG | - | chr2_2:4698408-4698427 | Msa0232420:CDS | 60.0% | |
| TGCTGTGAGCCGAGGTTACG+AGG | - | chr2_2:4698484-4698503 | Msa0232420:CDS | 60.0% | |
| GAGCCGAGGTTACGAGGATC+TGG | - | chr2_2:4698490-4698509 | Msa0232420:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | - | chr2_2:4698659-4698678 | Msa0232420:CDS | 60.0% | |
| AAAGCCGGTGTGGGTGGATG+AGG | - | chr2_2:4698244-4698263 | Msa0232420:CDS | 60.0% | |
| ACTGGGCGCAGCTGGATTCA+GGG | - | chr2_2:4698408-4698427 | Msa0232420:CDS | 60.0% | |
| TGCTGTGAGCCGAGGTTACG+AGG | - | chr2_2:4698484-4698503 | Msa0232420:CDS | 60.0% | |
| GAGCCGAGGTTACGAGGATC+TGG | - | chr2_2:4698490-4698509 | Msa0232420:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | - | chr2_2:4698659-4698678 | Msa0232420:CDS | 60.0% | |
| GGATGCCGCGGCTTCTGCAA+AGG | - | chr2_2:4698115-4698134 | Msa0232420:CDS | 65.0% | |
| GCTGCGCCCAGTCAGTTCCT+CGG | + | chr2_2:4698400-4698419 | None:intergenic | 65.0% | |
| AGGAACTGACTGGGCGCAGC+TGG | - | chr2_2:4698400-4698419 | Msa0232420:CDS | 65.0% | |
| GACTGGGCGCAGCTGGATTC+AGG | - | chr2_2:4698407-4698426 | Msa0232420:CDS | 65.0% | |
| GGATGCCGCGGCTTCTGCAA+AGG | - | chr2_2:4698115-4698134 | Msa0232420:CDS | 65.0% | |
| GCTGCGCCCAGTCAGTTCCT+CGG | + | chr2_2:4698400-4698419 | None:intergenic | 65.0% | |
| AGGAACTGACTGGGCGCAGC+TGG | - | chr2_2:4698400-4698419 | Msa0232420:CDS | 65.0% | |
| GACTGGGCGCAGCTGGATTC+AGG | - | chr2_2:4698407-4698426 | Msa0232420:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 4697867 | 4699534 | 4697867 | ID=Msa0232420;Name=Msa0232420 |
| chr2_2 | mRNA | 4697867 | 4699534 | 4697867 | ID=Msa0232420-mRNA-1;Parent=Msa0232420;Name=Msa0232420-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|555 |
| chr2_2 | exon | 4697867 | 4699534 | 4697867 | ID=Msa0232420-mRNA-1:exon:2013;Parent=Msa0232420-mRNA-1 |
| chr2_2 | CDS | 4697867 | 4699534 | 4697867 | ID=Msa0232420-mRNA-1:cds;Parent=Msa0232420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
