Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190240 | XP_003593289.1 | 98.919 | 555 | 6 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190240 | sp|Q9FMU5|UTP18_ARATH | 62.655 | 565 | 182 | 11 | 1 | 555 | 1 | 546 | 0.0 | 680 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190240 | G7IS79 | 98.919 | 555 | 6 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1129 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0114600 | Msa0190240 | 0.815750 | 7.876731e-52 | -8.615850e-47 |
| Msa0190240 | Msa0226900 | 0.825063 | 5.750362e-54 | -8.615850e-47 |
| Msa0190240 | Msa0232420 | 0.911441 | 6.058381e-83 | -8.615850e-47 |
| Msa0190240 | Msa0272070 | 0.912422 | 1.982786e-83 | -8.615850e-47 |
| Msa0190240 | Msa0403710 | 0.819575 | 1.080628e-52 | -8.615850e-47 |
| Msa0190240 | Msa0524110 | 0.829862 | 4.058204e-55 | -8.615850e-47 |
| Msa0190240 | Msa1060230 | 0.804127 | 2.507885e-49 | -8.615850e-47 |
| Msa0190240 | Msa1085420 | 0.809229 | 2.098126e-50 | -8.615850e-47 |
| Msa0190240 | Msa1105460 | 0.802949 | 4.400407e-49 | -8.615850e-47 |
| Msa0190240 | Msa1205490 | 0.828563 | 8.387759e-55 | -8.615850e-47 |
| Msa0190240 | Msa1221780 | -0.802243 | 6.154775e-49 | -8.615850e-47 |
| Msa0190240 | Msa1297640 | 0.818680 | 1.727672e-52 | -8.615850e-47 |
| Msa0190240 | Msa1297690 | 0.817610 | 3.015876e-52 | -8.615850e-47 |
| Msa0190240 | Msa1367890 | 0.812887 | 3.381031e-51 | -8.615850e-47 |
| Msa0190240 | Msa1451140 | 0.805623 | 1.220792e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190240 | MtrunA17_Chr2g0331501 | 91.712 | 555 | 46 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1056 |
| Msa0190240 | MtrunA17_Chr2g0279781 | 91.712 | 555 | 5 | 1 | 1 | 555 | 1 | 514 | 0.0 | 1030 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190240 | AT5G14050.1 | 62.655 | 565 | 182 | 11 | 1 | 555 | 1 | 546 | 0.0 | 680 |
Find 115 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTATTCACCTCCTGAATT+TGG | 0.168421 | 2_1:+5681818 | Msa0190240:CDS |
| GACTGGGCGCAGCTGGATTC+AGG | 0.199184 | 2_1:+5682154 | Msa0190240:CDS |
| ATGGAACTGAACTGAATTAA+TGG | 0.221155 | 2_1:-5682377 | None:intergenic |
| GAGGATGAGGATTTGATATC+TGG | 0.277710 | 2_1:+5682076 | Msa0190240:CDS |
| TAGCCAAAGTCAACAGATTA+AGG | 0.291410 | 2_1:+5682038 | Msa0190240:CDS |
| CTGAGAAGTCAGCATCTTCT+TGG | 0.323321 | 2_1:-5681937 | None:intergenic |
| AAAGCTATCATTTGAGAATC+AGG | 0.336697 | 2_1:-5682667 | None:intergenic |
| AAGGAAGATACTTTCAATCT+TGG | 0.340340 | 2_1:-5682476 | None:intergenic |
| GAAGAGTATTGAAGTGTTTG+AGG | 0.342182 | 2_1:+5682639 | Msa0190240:CDS |
| AGATTATCAATGGTCTTGAT+AGG | 0.358024 | 2_1:-5683006 | None:intergenic |
| TACTTCAGGCATGGTGATAA+TGG | 0.362722 | 2_1:-5683263 | None:intergenic |
| GGTCAGCTGCTTCTTGCTGC+TGG | 0.365476 | 2_1:+5682406 | Msa0190240:CDS |
| TCAACAGATTAAGGAAGTTA+AGG | 0.371537 | 2_1:+5682047 | Msa0190240:CDS |
| AGGAACTGACTGGGCGCAGC+TGG | 0.391668 | 2_1:+5682147 | Msa0190240:CDS |
| GTTAAGGAAGGAGGAGGATG+AGG | 0.392451 | 2_1:+5682063 | Msa0190240:CDS |
| TGGGCTAAAATCAATACAAC+GGG | 0.399262 | 2_1:-5683181 | None:intergenic |
| TGGAACTGAACTGAATTAAT+GGG | 0.402013 | 2_1:-5682376 | None:intergenic |
| CTTCCTTAATCTGTTGACTT+TGG | 0.407960 | 2_1:-5682041 | None:intergenic |
| GGGTCTCAGGTGATAATATC+AGG | 0.411556 | 2_1:+5682538 | Msa0190240:CDS |
| TTTCTTGCCCGATGGGTCTC+AGG | 0.414581 | 2_1:+5682525 | Msa0190240:CDS |
| ATGGCTGTAGGAAATGCTTC+AGG | 0.420095 | 2_1:+5683216 | Msa0190240:CDS |
| TTATAGTCTTGATTTAGTTA+AGG | 0.420893 | 2_1:+5682576 | Msa0190240:CDS |
| TTCGAATGGGGCAATCTTCA+AGG | 0.424695 | 2_1:-5682495 | None:intergenic |
| TCAGTTCAGTTCCATCGAAA+TGG | 0.438541 | 2_1:+5682385 | Msa0190240:CDS |
| AAATACTAGCAATCTGTTCA+AGG | 0.442805 | 2_1:+5683070 | Msa0190240:CDS |
| TTCAGTATTCAGATTATCAA+TGG | 0.445525 | 2_1:-5683016 | None:intergenic |
| AATATACAAGATCCCGCTAA+TGG | 0.453091 | 2_1:+5682352 | Msa0190240:CDS |
| TACAATAGCGAGGAATTTCT+CGG | 0.460074 | 2_1:+5682970 | Msa0190240:CDS |
| GAGCCGAGGTTACGAGGATC+TGG | 0.461776 | 2_1:+5682237 | Msa0190240:CDS |
| GTAGATGAAGGCTGTTTAAA+CGG | 0.466326 | 2_1:+5682877 | Msa0190240:CDS |
| TCACCTCCTGAATTTGGAAA+GGG | 0.467907 | 2_1:+5681824 | Msa0190240:CDS |
| GCTGCAAAATGTGTCCCTAC+TGG | 0.467974 | 2_1:-5682919 | None:intergenic |
| AAGGCTAGAGTTGATAAGAT+TGG | 0.470242 | 2_1:+5682595 | Msa0190240:CDS |
| AGCTCAACCGAGGAACTGAC+TGG | 0.472580 | 2_1:+5682137 | Msa0190240:CDS |
| TGATGGTCATATTTACCATT+GGG | 0.474225 | 2_1:+5682822 | Msa0190240:CDS |
| GATAAGATTGGTCCGCTGTT+GGG | 0.475592 | 2_1:+5682607 | Msa0190240:CDS |
| ACTGGGCGCAGCTGGATTCA+GGG | 0.478998 | 2_1:+5682155 | Msa0190240:CDS |
| AAGCATCTTTCTTGCCCGAT+GGG | 0.479466 | 2_1:+5682518 | Msa0190240:CDS |
| TTTGCAGCTGGTTCAGCTAG+TGG | 0.484592 | 2_1:+5682934 | Msa0190240:CDS |
| GTGATGGTCATATTTACCAT+TGG | 0.489547 | 2_1:+5682821 | Msa0190240:CDS |
| AAGGAAGTTAAGGAAGGAGG+AGG | 0.489554 | 2_1:+5682057 | Msa0190240:CDS |
| AAAGCCGGTGTGGGTGGATG+AGG | 0.489666 | 2_1:+5681991 | Msa0190240:CDS |
| CAGAGTATGTGTCAAGATTG+AGG | 0.492768 | 2_1:+5682101 | Msa0190240:CDS |
| ACAAAGTCGAAGCAATTAGT+TGG | 0.498298 | 2_1:+5682724 | Msa0190240:CDS |
| ACAATAGCGAGGAATTTCTC+GGG | 0.503579 | 2_1:+5682971 | Msa0190240:CDS |
| AGAGTATGTGTCAAGATTGA+GGG | 0.513752 | 2_1:+5682102 | Msa0190240:CDS |
| GAATTAATGGGACCATTAGC+GGG | 0.514356 | 2_1:-5682364 | None:intergenic |
| TGATAAGATTGGTCCGCTGT+TGG | 0.514998 | 2_1:+5682606 | Msa0190240:CDS |
| GATTGGTCCGCTGTTGGGTA+GGG | 0.516250 | 2_1:+5682612 | Msa0190240:CDS |
| GGATGCCGCGGCTTCTGCAA+AGG | 0.518753 | 2_1:+5681862 | Msa0190240:CDS |
| GCTGCGCCCAGTCAGTTCCT+CGG | 0.520974 | 2_1:-5682144 | None:intergenic |
| TGAATTAATGGGACCATTAG+CGG | 0.525771 | 2_1:-5682365 | None:intergenic |
| ATTAAGGAAGTTAAGGAAGG+AGG | 0.530708 | 2_1:+5682054 | Msa0190240:CDS |
| GGTGGATGAGGAAGAAGAAA+AGG | 0.532095 | 2_1:+5682003 | Msa0190240:CDS |
| TTCGAGTATTCAAGATGTCC+TGG | 0.533881 | 2_1:-5682316 | None:intergenic |
| AAAGGAAATGAGGTTGAAGA+TGG | 0.535620 | 2_1:+5681674 | Msa0190240:CDS |
| AGATTGGTCCGCTGTTGGGT+AGG | 0.539038 | 2_1:+5682611 | Msa0190240:CDS |
| TTCACCTCCTGAATTTGGAA+AGG | 0.542160 | 2_1:+5681823 | Msa0190240:CDS |
| GCTCTTTGTACTTCTCCAGT+AGG | 0.543723 | 2_1:+5682904 | Msa0190240:CDS |
| ATTATCACCTGAGACCCATC+GGG | 0.550131 | 2_1:-5682532 | None:intergenic |
| AGATGGAAAGGAAGAACAGT+TGG | 0.550771 | 2_1:+5681742 | Msa0190240:CDS |
| TTGAGCTACTCTTCACAACC+AGG | 0.551752 | 2_1:-5682285 | None:intergenic |
| CAATACAACGGGGATAATGC+AGG | 0.553209 | 2_1:-5683170 | None:intergenic |
| AAAGAGGAAGCTAGATGGAA+AGG | 0.553316 | 2_1:+5681730 | Msa0190240:CDS |
| TGATAATCTGAATACTGAAG+TGG | 0.554817 | 2_1:+5683020 | Msa0190240:CDS |
| TTGTTAAGCGCTGGTGGTGA+TGG | 0.557212 | 2_1:+5682805 | Msa0190240:CDS |
| AAAGCATCTTTCTTGCCCGA+TGG | 0.557386 | 2_1:+5682517 | Msa0190240:CDS |
| TTCTTGCTGCTGGATTAGAC+CGG | 0.558175 | 2_1:+5682416 | Msa0190240:CDS |
| TATTATCACCTGAGACCCAT+CGG | 0.558404 | 2_1:-5682533 | None:intergenic |
| AAATGAGGTTGAAGATGGGA+AGG | 0.558756 | 2_1:+5681679 | Msa0190240:CDS |
| AAGGAAATGAGGTTGAAGAT+GGG | 0.562237 | 2_1:+5681675 | Msa0190240:CDS |
| AGTAGCTCAAAATTGTTGCC+AGG | 0.564255 | 2_1:+5682298 | Msa0190240:CDS |
| GGAGTTTGATGTTGATACTG+AGG | 0.566399 | 2_1:+5681700 | Msa0190240:CDS |
| CTCTTTGTACTTCTCCAGTA+GGG | 0.567092 | 2_1:+5682905 | Msa0190240:CDS |
| CAGATTAAGGAAGTTAAGGA+AGG | 0.571312 | 2_1:+5682051 | Msa0190240:CDS |
| ACCTCCTGAATTTGGAAAGG+GGG | 0.574743 | 2_1:+5681826 | Msa0190240:CDS |
| TGCTGTGAGCCGAGGTTACG+AGG | 0.576924 | 2_1:+5682231 | Msa0190240:CDS |
| CATCCAGATCCTCGTAACCT+CGG | 0.587962 | 2_1:-5682240 | None:intergenic |
| AATACTAGCAATCTGTTCAA+GGG | 0.593971 | 2_1:+5683071 | Msa0190240:CDS |
| GGAAGTTGTGAAAGGAAATG+AGG | 0.594864 | 2_1:+5681664 | Msa0190240:CDS |
| TTTCTGATCTACTTCAGGCA+TGG | 0.600646 | 2_1:-5683272 | None:intergenic |
| GAAGCAGCTGACCATTTCGA+TGG | 0.604108 | 2_1:-5682396 | None:intergenic |
| ATACACAAAGGTGTAGATGA+AGG | 0.605326 | 2_1:+5682865 | Msa0190240:CDS |
| CTTCAGTAAAAGCTAATGAA+CGG | 0.605560 | 2_1:-5682771 | None:intergenic |
| TGTGAATATTTACAATAGCG+AGG | 0.608077 | 2_1:+5682960 | Msa0190240:CDS |
| AAAAGGGAGGAAGTTGTGAA+AGG | 0.616065 | 2_1:+5681656 | Msa0190240:CDS |
| AATAAAGCTGCTGTGAGCCG+AGG | 0.616455 | 2_1:+5682223 | Msa0190240:CDS |
| AGAAGCCTTTGCAGAAGCCG+CGG | 0.617253 | 2_1:-5681867 | None:intergenic |
| TCTCAGAACAAATGAAGACC+TGG | 0.621951 | 2_1:+5682267 | Msa0190240:CDS |
| ACCATTGGGATCTGAGAACA+AGG | 0.623692 | 2_1:+5682836 | Msa0190240:CDS |
| CTGGGCTAAAATCAATACAA+CGG | 0.628701 | 2_1:-5683182 | None:intergenic |
| ACAGCCATAAAACCACCACC+TGG | 0.630227 | 2_1:-5683201 | None:intergenic |
| TGATGATGAGGTGGATGCCG+CGG | 0.633167 | 2_1:+5681850 | Msa0190240:CDS |
| AAAGGAAGAACAGTTGGCAA+AGG | 0.637301 | 2_1:+5681748 | Msa0190240:CDS |
| CACCTCCTGAATTTGGAAAG+GGG | 0.637398 | 2_1:+5681825 | Msa0190240:CDS |
| GCTCAACCGAGGAACTGACT+GGG | 0.639373 | 2_1:+5682138 | Msa0190240:CDS |
| CCAGTTAGAGAAAACAGTGT+AGG | 0.639938 | 2_1:-5683130 | None:intergenic |
| GTTGGTACTCTGAAGATGAA+CGG | 0.640176 | 2_1:+5682742 | Msa0190240:CDS |
| TTAGAGAAAACAGTGTAGGA+TGG | 0.640295 | 2_1:-5683126 | None:intergenic |
| CAATAGCGAGGAATTTCTCG+GGG | 0.640898 | 2_1:+5682972 | Msa0190240:CDS |
| GAAAAGAAAGCCGGTGTGGG+TGG | 0.643363 | 2_1:+5681985 | Msa0190240:CDS |
| TGCAGGCTCGCATTTGAACG+CGG | 0.645712 | 2_1:-5683153 | None:intergenic |
| TCTTCCTCATCCACCCACAC+CGG | 0.648855 | 2_1:-5681995 | None:intergenic |
| CTTTGAAAAGAAAGCCGGTG+TGG | 0.649038 | 2_1:+5681981 | Msa0190240:CDS |
| TTCTCTTCCCTACCCAACAG+CGG | 0.649632 | 2_1:-5682619 | None:intergenic |
| TGATGCTTTGAAAAGAAAGC+CGG | 0.651576 | 2_1:+5681976 | Msa0190240:CDS |
| CAGCCATAAAACCACCACCT+GGG | 0.668450 | 2_1:-5683200 | None:intergenic |
| CATCTTCTTGGTAAACAGTG+AGG | 0.685265 | 2_1:-5681925 | None:intergenic |
| TTTGAAAAGAAAGCCGGTGT+GGG | 0.693980 | 2_1:+5681982 | Msa0190240:CDS |
| ACAAGGACTTGTATACACAA+AGG | 0.694652 | 2_1:+5682853 | Msa0190240:CDS |
| CAGCATGCAAAGCTCAACCG+AGG | 0.712589 | 2_1:+5682127 | Msa0190240:CDS |
| TCCTTGTTCTCAGATCCCAA+TGG | 0.719029 | 2_1:-5682837 | None:intergenic |
| TGAGGCGACTATCTGCAGAA+CGG | 0.726428 | 2_1:-5681907 | None:intergenic |
| AATAGCGAGGAATTTCTCGG+GGG | 0.758971 | 2_1:+5682973 | Msa0190240:CDS |
| GGGCTAAAATCAATACAACG+GGG | 0.814054 | 2_1:-5683180 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAAATTTTTTCAAATTGA+TGG | + | chr2_1:5682442-5682461 | Msa0190240:CDS | 15.0% |
| !!! | CTTAAATTTTTTCAAATTGA+TGG | + | chr2_1:5682442-5682461 | Msa0190240:CDS | 15.0% |
| !! | TTTGAAAAAATTTAAGCTTC+CGG | - | chr2_1:5682438-5682457 | None:intergenic | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | + | chr2_1:5682576-5682595 | Msa0190240:CDS | 20.0% |
| !! | TTTGAAAAAATTTAAGCTTC+CGG | - | chr2_1:5682438-5682457 | None:intergenic | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | + | chr2_1:5682576-5682595 | Msa0190240:CDS | 20.0% |
| !!! | TTTTTCAAATTGATGGCAAA+CGG | + | chr2_1:5682449-5682468 | Msa0190240:CDS | 25.0% |
| !! | CAATGAAGGTTATATTTTAC+TGG | + | chr2_1:5682696-5682715 | Msa0190240:CDS | 25.0% |
| ! | TTCAGTATTCAGATTATCAA+TGG | - | chr2_1:5683019-5683038 | None:intergenic | 25.0% |
| !!! | TTTTTCAAATTGATGGCAAA+CGG | + | chr2_1:5682449-5682468 | Msa0190240:CDS | 25.0% |
| !! | CAATGAAGGTTATATTTTAC+TGG | + | chr2_1:5682696-5682715 | Msa0190240:CDS | 25.0% |
| ! | TTCAGTATTCAGATTATCAA+TGG | - | chr2_1:5683019-5683038 | None:intergenic | 25.0% |
| ! | CTCTAAAAATGAGACGAAAA+GGG | + | chr2_1:5681640-5681659 | Msa0190240:CDS | 30.0% |
| TCAACAGATTAAGGAAGTTA+AGG | + | chr2_1:5682047-5682066 | Msa0190240:CDS | 30.0% | |
| TGGAACTGAACTGAATTAAT+GGG | - | chr2_1:5682379-5682398 | None:intergenic | 30.0% | |
| ATGGAACTGAACTGAATTAA+TGG | - | chr2_1:5682380-5682399 | None:intergenic | 30.0% | |
| AAGGAAGATACTTTCAATCT+TGG | - | chr2_1:5682479-5682498 | None:intergenic | 30.0% | |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | - | chr2_1:5682511-5682530 | None:intergenic | 30.0% |
| AAAGCTATCATTTGAGAATC+AGG | - | chr2_1:5682670-5682689 | None:intergenic | 30.0% | |
| ! | TTCTCAAATGATAGCTTTTG+TGG | + | chr2_1:5682672-5682691 | Msa0190240:CDS | 30.0% |
| ! | TCTCAAATGATAGCTTTTGT+GGG | + | chr2_1:5682673-5682692 | Msa0190240:CDS | 30.0% |
| CTTCAGTAAAAGCTAATGAA+CGG | - | chr2_1:5682774-5682793 | None:intergenic | 30.0% | |
| !!! | TCATTAGCTTTTACTGAAGA+TGG | + | chr2_1:5682775-5682794 | Msa0190240:CDS | 30.0% |
| TGATGGTCATATTTACCATT+GGG | + | chr2_1:5682822-5682841 | Msa0190240:CDS | 30.0% | |
| TGTGAATATTTACAATAGCG+AGG | + | chr2_1:5682960-5682979 | Msa0190240:CDS | 30.0% | |
| ! | AGATTATCAATGGTCTTGAT+AGG | - | chr2_1:5683009-5683028 | None:intergenic | 30.0% |
| TGATAATCTGAATACTGAAG+TGG | + | chr2_1:5683020-5683039 | Msa0190240:CDS | 30.0% | |
| AAATACTAGCAATCTGTTCA+AGG | + | chr2_1:5683070-5683089 | Msa0190240:CDS | 30.0% | |
| AATACTAGCAATCTGTTCAA+GGG | + | chr2_1:5683071-5683090 | Msa0190240:CDS | 30.0% | |
| ! | CTCTAAAAATGAGACGAAAA+GGG | + | chr2_1:5681640-5681659 | Msa0190240:CDS | 30.0% |
| TCAACAGATTAAGGAAGTTA+AGG | + | chr2_1:5682047-5682066 | Msa0190240:CDS | 30.0% | |
| TGGAACTGAACTGAATTAAT+GGG | - | chr2_1:5682379-5682398 | None:intergenic | 30.0% | |
| ATGGAACTGAACTGAATTAA+TGG | - | chr2_1:5682380-5682399 | None:intergenic | 30.0% | |
| AAGGAAGATACTTTCAATCT+TGG | - | chr2_1:5682479-5682498 | None:intergenic | 30.0% | |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | - | chr2_1:5682511-5682530 | None:intergenic | 30.0% |
| AAAGCTATCATTTGAGAATC+AGG | - | chr2_1:5682670-5682689 | None:intergenic | 30.0% | |
| ! | TTCTCAAATGATAGCTTTTG+TGG | + | chr2_1:5682672-5682691 | Msa0190240:CDS | 30.0% |
| ! | TCTCAAATGATAGCTTTTGT+GGG | + | chr2_1:5682673-5682692 | Msa0190240:CDS | 30.0% |
| CTTCAGTAAAAGCTAATGAA+CGG | - | chr2_1:5682774-5682793 | None:intergenic | 30.0% | |
| !!! | TCATTAGCTTTTACTGAAGA+TGG | + | chr2_1:5682775-5682794 | Msa0190240:CDS | 30.0% |
| TGATGGTCATATTTACCATT+GGG | + | chr2_1:5682822-5682841 | Msa0190240:CDS | 30.0% | |
| TGTGAATATTTACAATAGCG+AGG | + | chr2_1:5682960-5682979 | Msa0190240:CDS | 30.0% | |
| ! | AGATTATCAATGGTCTTGAT+AGG | - | chr2_1:5683009-5683028 | None:intergenic | 30.0% |
| TGATAATCTGAATACTGAAG+TGG | + | chr2_1:5683020-5683039 | Msa0190240:CDS | 30.0% | |
| AAATACTAGCAATCTGTTCA+AGG | + | chr2_1:5683070-5683089 | Msa0190240:CDS | 30.0% | |
| AATACTAGCAATCTGTTCAA+GGG | + | chr2_1:5683071-5683090 | Msa0190240:CDS | 30.0% | |
| !! | GCTCTAAAAATGAGACGAAA+AGG | + | chr2_1:5681639-5681658 | Msa0190240:CDS | 35.0% |
| TAAAAATGAGACGAAAAGGG+AGG | + | chr2_1:5681643-5681662 | Msa0190240:CDS | 35.0% | |
| AAAGGAAATGAGGTTGAAGA+TGG | + | chr2_1:5681674-5681693 | Msa0190240:CDS | 35.0% | |
| AAGGAAATGAGGTTGAAGAT+GGG | + | chr2_1:5681675-5681694 | Msa0190240:CDS | 35.0% | |
| ATACTGAGGAAACGAAAAAG+AGG | + | chr2_1:5681714-5681733 | Msa0190240:CDS | 35.0% | |
| ! | AAGCTTGAGAGCTTTTTGTT+TGG | + | chr2_1:5681791-5681810 | Msa0190240:CDS | 35.0% |
| !! | AGCTTGAGAGCTTTTTGTTT+GGG | + | chr2_1:5681792-5681811 | Msa0190240:CDS | 35.0% |
| !! | TGATGCTTTGAAAAGAAAGC+CGG | + | chr2_1:5681976-5681995 | Msa0190240:CDS | 35.0% |
| TAGCCAAAGTCAACAGATTA+AGG | + | chr2_1:5682038-5682057 | Msa0190240:CDS | 35.0% | |
| !! | CTTCCTTAATCTGTTGACTT+TGG | - | chr2_1:5682044-5682063 | None:intergenic | 35.0% |
| CAGATTAAGGAAGTTAAGGA+AGG | + | chr2_1:5682051-5682070 | Msa0190240:CDS | 35.0% | |
| ATTAAGGAAGTTAAGGAAGG+AGG | + | chr2_1:5682054-5682073 | Msa0190240:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | + | chr2_1:5682102-5682121 | Msa0190240:CDS | 35.0% | |
| AATATACAAGATCCCGCTAA+TGG | + | chr2_1:5682352-5682371 | Msa0190240:CDS | 35.0% | |
| TGAATTAATGGGACCATTAG+CGG | - | chr2_1:5682368-5682387 | None:intergenic | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | - | chr2_1:5682510-5682529 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | - | chr2_1:5682512-5682531 | None:intergenic | 35.0% |
| !! | AAGGCTAGAGTTGATAAGAT+TGG | + | chr2_1:5682595-5682614 | Msa0190240:CDS | 35.0% |
| !! | GAAGAGTATTGAAGTGTTTG+AGG | + | chr2_1:5682639-5682658 | Msa0190240:CDS | 35.0% |
| ACAAAGTCGAAGCAATTAGT+TGG | + | chr2_1:5682724-5682743 | Msa0190240:CDS | 35.0% | |
| GTGATGGTCATATTTACCAT+TGG | + | chr2_1:5682821-5682840 | Msa0190240:CDS | 35.0% | |
| ACAAGGACTTGTATACACAA+AGG | + | chr2_1:5682853-5682872 | Msa0190240:CDS | 35.0% | |
| ! | ATACACAAAGGTGTAGATGA+AGG | + | chr2_1:5682865-5682884 | Msa0190240:CDS | 35.0% |
| GTAGATGAAGGCTGTTTAAA+CGG | + | chr2_1:5682877-5682896 | Msa0190240:CDS | 35.0% | |
| TACAATAGCGAGGAATTTCT+CGG | + | chr2_1:5682970-5682989 | Msa0190240:CDS | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | - | chr2_1:5683129-5683148 | None:intergenic | 35.0% | |
| TGGGCTAAAATCAATACAAC+GGG | - | chr2_1:5683184-5683203 | None:intergenic | 35.0% | |
| CTGGGCTAAAATCAATACAA+CGG | - | chr2_1:5683185-5683204 | None:intergenic | 35.0% | |
| !! | GCTCTAAAAATGAGACGAAA+AGG | + | chr2_1:5681639-5681658 | Msa0190240:CDS | 35.0% |
| TAAAAATGAGACGAAAAGGG+AGG | + | chr2_1:5681643-5681662 | Msa0190240:CDS | 35.0% | |
| AAAGGAAATGAGGTTGAAGA+TGG | + | chr2_1:5681674-5681693 | Msa0190240:CDS | 35.0% | |
| AAGGAAATGAGGTTGAAGAT+GGG | + | chr2_1:5681675-5681694 | Msa0190240:CDS | 35.0% | |
| ATACTGAGGAAACGAAAAAG+AGG | + | chr2_1:5681714-5681733 | Msa0190240:CDS | 35.0% | |
| ! | AAGCTTGAGAGCTTTTTGTT+TGG | + | chr2_1:5681791-5681810 | Msa0190240:CDS | 35.0% |
| !! | AGCTTGAGAGCTTTTTGTTT+GGG | + | chr2_1:5681792-5681811 | Msa0190240:CDS | 35.0% |
| !! | TGATGCTTTGAAAAGAAAGC+CGG | + | chr2_1:5681976-5681995 | Msa0190240:CDS | 35.0% |
| TAGCCAAAGTCAACAGATTA+AGG | + | chr2_1:5682038-5682057 | Msa0190240:CDS | 35.0% | |
| !! | CTTCCTTAATCTGTTGACTT+TGG | - | chr2_1:5682044-5682063 | None:intergenic | 35.0% |
| CAGATTAAGGAAGTTAAGGA+AGG | + | chr2_1:5682051-5682070 | Msa0190240:CDS | 35.0% | |
| ATTAAGGAAGTTAAGGAAGG+AGG | + | chr2_1:5682054-5682073 | Msa0190240:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | + | chr2_1:5682102-5682121 | Msa0190240:CDS | 35.0% | |
| AATATACAAGATCCCGCTAA+TGG | + | chr2_1:5682352-5682371 | Msa0190240:CDS | 35.0% | |
| TGAATTAATGGGACCATTAG+CGG | - | chr2_1:5682368-5682387 | None:intergenic | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | - | chr2_1:5682510-5682529 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | - | chr2_1:5682512-5682531 | None:intergenic | 35.0% |
| !! | AAGGCTAGAGTTGATAAGAT+TGG | + | chr2_1:5682595-5682614 | Msa0190240:CDS | 35.0% |
| !! | GAAGAGTATTGAAGTGTTTG+AGG | + | chr2_1:5682639-5682658 | Msa0190240:CDS | 35.0% |
| ACAAAGTCGAAGCAATTAGT+TGG | + | chr2_1:5682724-5682743 | Msa0190240:CDS | 35.0% | |
| GTGATGGTCATATTTACCAT+TGG | + | chr2_1:5682821-5682840 | Msa0190240:CDS | 35.0% | |
| ACAAGGACTTGTATACACAA+AGG | + | chr2_1:5682853-5682872 | Msa0190240:CDS | 35.0% | |
| ! | ATACACAAAGGTGTAGATGA+AGG | + | chr2_1:5682865-5682884 | Msa0190240:CDS | 35.0% |
| GTAGATGAAGGCTGTTTAAA+CGG | + | chr2_1:5682877-5682896 | Msa0190240:CDS | 35.0% | |
| TACAATAGCGAGGAATTTCT+CGG | + | chr2_1:5682970-5682989 | Msa0190240:CDS | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | - | chr2_1:5683129-5683148 | None:intergenic | 35.0% | |
| TGGGCTAAAATCAATACAAC+GGG | - | chr2_1:5683184-5683203 | None:intergenic | 35.0% | |
| CTGGGCTAAAATCAATACAA+CGG | - | chr2_1:5683185-5683204 | None:intergenic | 35.0% | |
| AAAAGGGAGGAAGTTGTGAA+AGG | + | chr2_1:5681656-5681675 | Msa0190240:CDS | 40.0% | |
| GGAAGTTGTGAAAGGAAATG+AGG | + | chr2_1:5681664-5681683 | Msa0190240:CDS | 40.0% | |
| AAATGAGGTTGAAGATGGGA+AGG | + | chr2_1:5681679-5681698 | Msa0190240:CDS | 40.0% | |
| GGAGTTTGATGTTGATACTG+AGG | + | chr2_1:5681700-5681719 | Msa0190240:CDS | 40.0% | |
| ACGAAAAAGAGGAAGCTAGA+TGG | + | chr2_1:5681725-5681744 | Msa0190240:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | + | chr2_1:5681730-5681749 | Msa0190240:CDS | 40.0% | |
| AGATGGAAAGGAAGAACAGT+TGG | + | chr2_1:5681742-5681761 | Msa0190240:CDS | 40.0% | |
| AAAGGAAGAACAGTTGGCAA+AGG | + | chr2_1:5681748-5681767 | Msa0190240:CDS | 40.0% | |
| CTCTATTCACCTCCTGAATT+TGG | + | chr2_1:5681818-5681837 | Msa0190240:CDS | 40.0% | |
| TTCACCTCCTGAATTTGGAA+AGG | + | chr2_1:5681823-5681842 | Msa0190240:CDS | 40.0% | |
| TCACCTCCTGAATTTGGAAA+GGG | + | chr2_1:5681824-5681843 | Msa0190240:CDS | 40.0% | |
| CATCTTCTTGGTAAACAGTG+AGG | - | chr2_1:5681928-5681947 | None:intergenic | 40.0% | |
| TTTGAAAAGAAAGCCGGTGT+GGG | + | chr2_1:5681982-5682001 | Msa0190240:CDS | 40.0% | |
| GAGGATGAGGATTTGATATC+TGG | + | chr2_1:5682076-5682095 | Msa0190240:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | + | chr2_1:5682101-5682120 | Msa0190240:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | + | chr2_1:5682169-5682188 | Msa0190240:CDS | 40.0% | |
| TCTCAGAACAAATGAAGACC+TGG | + | chr2_1:5682267-5682286 | Msa0190240:CDS | 40.0% | |
| AGTAGCTCAAAATTGTTGCC+AGG | + | chr2_1:5682298-5682317 | Msa0190240:CDS | 40.0% | |
| TTCGAGTATTCAAGATGTCC+TGG | - | chr2_1:5682319-5682338 | None:intergenic | 40.0% | |
| GAATTAATGGGACCATTAGC+GGG | - | chr2_1:5682367-5682386 | None:intergenic | 40.0% | |
| TCAGTTCAGTTCCATCGAAA+TGG | + | chr2_1:5682385-5682404 | Msa0190240:CDS | 40.0% | |
| TATTATCACCTGAGACCCAT+CGG | - | chr2_1:5682536-5682555 | None:intergenic | 40.0% | |
| ! | ATAGCTTTTGTGGGCAATGA+AGG | + | chr2_1:5682682-5682701 | Msa0190240:CDS | 40.0% |
| ! | GTTGGTACTCTGAAGATGAA+CGG | + | chr2_1:5682742-5682761 | Msa0190240:CDS | 40.0% |
| GGACAAAAATTGTTAAGCGC+TGG | + | chr2_1:5682796-5682815 | Msa0190240:CDS | 40.0% | |
| !! | CAAAAATTGTTAAGCGCTGG+TGG | + | chr2_1:5682799-5682818 | Msa0190240:CDS | 40.0% |
| CTCTTTGTACTTCTCCAGTA+GGG | + | chr2_1:5682905-5682924 | Msa0190240:CDS | 40.0% | |
| ACAATAGCGAGGAATTTCTC+GGG | + | chr2_1:5682971-5682990 | Msa0190240:CDS | 40.0% | |
| CCAGTTAGAGAAAACAGTGT+AGG | - | chr2_1:5683133-5683152 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | + | chr2_1:5683130-5683149 | Msa0190240:CDS | 40.0% |
| GGGCTAAAATCAATACAACG+GGG | - | chr2_1:5683183-5683202 | None:intergenic | 40.0% | |
| !!! | CGTTGTATTGATTTTAGCCC+AGG | + | chr2_1:5683183-5683202 | Msa0190240:CDS | 40.0% |
| !!! | TGTATTGATTTTAGCCCAGG+TGG | + | chr2_1:5683186-5683205 | Msa0190240:CDS | 40.0% |
| AAAAGGGAGGAAGTTGTGAA+AGG | + | chr2_1:5681656-5681675 | Msa0190240:CDS | 40.0% | |
| GGAAGTTGTGAAAGGAAATG+AGG | + | chr2_1:5681664-5681683 | Msa0190240:CDS | 40.0% | |
| AAATGAGGTTGAAGATGGGA+AGG | + | chr2_1:5681679-5681698 | Msa0190240:CDS | 40.0% | |
| GGAGTTTGATGTTGATACTG+AGG | + | chr2_1:5681700-5681719 | Msa0190240:CDS | 40.0% | |
| ACGAAAAAGAGGAAGCTAGA+TGG | + | chr2_1:5681725-5681744 | Msa0190240:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | + | chr2_1:5681730-5681749 | Msa0190240:CDS | 40.0% | |
| AGATGGAAAGGAAGAACAGT+TGG | + | chr2_1:5681742-5681761 | Msa0190240:CDS | 40.0% | |
| AAAGGAAGAACAGTTGGCAA+AGG | + | chr2_1:5681748-5681767 | Msa0190240:CDS | 40.0% | |
| CTCTATTCACCTCCTGAATT+TGG | + | chr2_1:5681818-5681837 | Msa0190240:CDS | 40.0% | |
| TTCACCTCCTGAATTTGGAA+AGG | + | chr2_1:5681823-5681842 | Msa0190240:CDS | 40.0% | |
| TCACCTCCTGAATTTGGAAA+GGG | + | chr2_1:5681824-5681843 | Msa0190240:CDS | 40.0% | |
| CATCTTCTTGGTAAACAGTG+AGG | - | chr2_1:5681928-5681947 | None:intergenic | 40.0% | |
| TTTGAAAAGAAAGCCGGTGT+GGG | + | chr2_1:5681982-5682001 | Msa0190240:CDS | 40.0% | |
| GAGGATGAGGATTTGATATC+TGG | + | chr2_1:5682076-5682095 | Msa0190240:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | + | chr2_1:5682101-5682120 | Msa0190240:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | + | chr2_1:5682169-5682188 | Msa0190240:CDS | 40.0% | |
| TCTCAGAACAAATGAAGACC+TGG | + | chr2_1:5682267-5682286 | Msa0190240:CDS | 40.0% | |
| AGTAGCTCAAAATTGTTGCC+AGG | + | chr2_1:5682298-5682317 | Msa0190240:CDS | 40.0% | |
| TTCGAGTATTCAAGATGTCC+TGG | - | chr2_1:5682319-5682338 | None:intergenic | 40.0% | |
| GAATTAATGGGACCATTAGC+GGG | - | chr2_1:5682367-5682386 | None:intergenic | 40.0% | |
| TCAGTTCAGTTCCATCGAAA+TGG | + | chr2_1:5682385-5682404 | Msa0190240:CDS | 40.0% | |
| TATTATCACCTGAGACCCAT+CGG | - | chr2_1:5682536-5682555 | None:intergenic | 40.0% | |
| ! | ATAGCTTTTGTGGGCAATGA+AGG | + | chr2_1:5682682-5682701 | Msa0190240:CDS | 40.0% |
| ! | GTTGGTACTCTGAAGATGAA+CGG | + | chr2_1:5682742-5682761 | Msa0190240:CDS | 40.0% |
| GGACAAAAATTGTTAAGCGC+TGG | + | chr2_1:5682796-5682815 | Msa0190240:CDS | 40.0% | |
| !! | CAAAAATTGTTAAGCGCTGG+TGG | + | chr2_1:5682799-5682818 | Msa0190240:CDS | 40.0% |
| CTCTTTGTACTTCTCCAGTA+GGG | + | chr2_1:5682905-5682924 | Msa0190240:CDS | 40.0% | |
| ACAATAGCGAGGAATTTCTC+GGG | + | chr2_1:5682971-5682990 | Msa0190240:CDS | 40.0% | |
| CCAGTTAGAGAAAACAGTGT+AGG | - | chr2_1:5683133-5683152 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | + | chr2_1:5683130-5683149 | Msa0190240:CDS | 40.0% |
| GGGCTAAAATCAATACAACG+GGG | - | chr2_1:5683183-5683202 | None:intergenic | 40.0% | |
| !!! | CGTTGTATTGATTTTAGCCC+AGG | + | chr2_1:5683183-5683202 | Msa0190240:CDS | 40.0% |
| !!! | TGTATTGATTTTAGCCCAGG+TGG | + | chr2_1:5683186-5683205 | Msa0190240:CDS | 40.0% |
| CACCTCCTGAATTTGGAAAG+GGG | + | chr2_1:5681825-5681844 | Msa0190240:CDS | 45.0% | |
| ACCTCCTGAATTTGGAAAGG+GGG | + | chr2_1:5681826-5681845 | Msa0190240:CDS | 45.0% | |
| TCATCCCCCTTTCCAAATTC+AGG | - | chr2_1:5681833-5681852 | None:intergenic | 45.0% | |
| CTGAGAAGTCAGCATCTTCT+TGG | - | chr2_1:5681940-5681959 | None:intergenic | 45.0% | |
| ! | CTTTGAAAAGAAAGCCGGTG+TGG | + | chr2_1:5681981-5682000 | Msa0190240:CDS | 45.0% |
| GGTGGATGAGGAAGAAGAAA+AGG | + | chr2_1:5682003-5682022 | Msa0190240:CDS | 45.0% | |
| AAGGAAGTTAAGGAAGGAGG+AGG | + | chr2_1:5682057-5682076 | Msa0190240:CDS | 45.0% | |
| GCTGGATTCAGGGTCAAAAA+TGG | + | chr2_1:5682165-5682184 | Msa0190240:CDS | 45.0% | |
| TTGAGCTACTCTTCACAACC+AGG | - | chr2_1:5682288-5682307 | None:intergenic | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | + | chr2_1:5682416-5682435 | Msa0190240:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | - | chr2_1:5682498-5682517 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | + | chr2_1:5682517-5682536 | Msa0190240:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | + | chr2_1:5682518-5682537 | Msa0190240:CDS | 45.0% | |
| ATTATCACCTGAGACCCATC+GGG | - | chr2_1:5682535-5682554 | None:intergenic | 45.0% | |
| GGGTCTCAGGTGATAATATC+AGG | + | chr2_1:5682538-5682557 | Msa0190240:CDS | 45.0% | |
| ! | TGATAAGATTGGTCCGCTGT+TGG | + | chr2_1:5682606-5682625 | Msa0190240:CDS | 45.0% |
| ! | GATAAGATTGGTCCGCTGTT+GGG | + | chr2_1:5682607-5682626 | Msa0190240:CDS | 45.0% |
| ACCATTGGGATCTGAGAACA+AGG | + | chr2_1:5682836-5682855 | Msa0190240:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | - | chr2_1:5682840-5682859 | None:intergenic | 45.0% | |
| GCTCTTTGTACTTCTCCAGT+AGG | + | chr2_1:5682904-5682923 | Msa0190240:CDS | 45.0% | |
| CAATAGCGAGGAATTTCTCG+GGG | + | chr2_1:5682972-5682991 | Msa0190240:CDS | 45.0% | |
| AATAGCGAGGAATTTCTCGG+GGG | + | chr2_1:5682973-5682992 | Msa0190240:CDS | 45.0% | |
| CAATACAACGGGGATAATGC+AGG | - | chr2_1:5683173-5683192 | None:intergenic | 45.0% | |
| !! | ATTGATTTTAGCCCAGGTGG+TGG | + | chr2_1:5683189-5683208 | Msa0190240:CDS | 45.0% |
| ATGGCTGTAGGAAATGCTTC+AGG | + | chr2_1:5683216-5683235 | Msa0190240:CDS | 45.0% | |
| CACCTCCTGAATTTGGAAAG+GGG | + | chr2_1:5681825-5681844 | Msa0190240:CDS | 45.0% | |
| ACCTCCTGAATTTGGAAAGG+GGG | + | chr2_1:5681826-5681845 | Msa0190240:CDS | 45.0% | |
| TCATCCCCCTTTCCAAATTC+AGG | - | chr2_1:5681833-5681852 | None:intergenic | 45.0% | |
| CTGAGAAGTCAGCATCTTCT+TGG | - | chr2_1:5681940-5681959 | None:intergenic | 45.0% | |
| ! | CTTTGAAAAGAAAGCCGGTG+TGG | + | chr2_1:5681981-5682000 | Msa0190240:CDS | 45.0% |
| GGTGGATGAGGAAGAAGAAA+AGG | + | chr2_1:5682003-5682022 | Msa0190240:CDS | 45.0% | |
| AAGGAAGTTAAGGAAGGAGG+AGG | + | chr2_1:5682057-5682076 | Msa0190240:CDS | 45.0% | |
| GCTGGATTCAGGGTCAAAAA+TGG | + | chr2_1:5682165-5682184 | Msa0190240:CDS | 45.0% | |
| TTGAGCTACTCTTCACAACC+AGG | - | chr2_1:5682288-5682307 | None:intergenic | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | + | chr2_1:5682416-5682435 | Msa0190240:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | - | chr2_1:5682498-5682517 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | + | chr2_1:5682517-5682536 | Msa0190240:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | + | chr2_1:5682518-5682537 | Msa0190240:CDS | 45.0% | |
| ATTATCACCTGAGACCCATC+GGG | - | chr2_1:5682535-5682554 | None:intergenic | 45.0% | |
| GGGTCTCAGGTGATAATATC+AGG | + | chr2_1:5682538-5682557 | Msa0190240:CDS | 45.0% | |
| ! | TGATAAGATTGGTCCGCTGT+TGG | + | chr2_1:5682606-5682625 | Msa0190240:CDS | 45.0% |
| ! | GATAAGATTGGTCCGCTGTT+GGG | + | chr2_1:5682607-5682626 | Msa0190240:CDS | 45.0% |
| ACCATTGGGATCTGAGAACA+AGG | + | chr2_1:5682836-5682855 | Msa0190240:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | - | chr2_1:5682840-5682859 | None:intergenic | 45.0% | |
| GCTCTTTGTACTTCTCCAGT+AGG | + | chr2_1:5682904-5682923 | Msa0190240:CDS | 45.0% | |
| CAATAGCGAGGAATTTCTCG+GGG | + | chr2_1:5682972-5682991 | Msa0190240:CDS | 45.0% | |
| AATAGCGAGGAATTTCTCGG+GGG | + | chr2_1:5682973-5682992 | Msa0190240:CDS | 45.0% | |
| CAATACAACGGGGATAATGC+AGG | - | chr2_1:5683173-5683192 | None:intergenic | 45.0% | |
| !! | ATTGATTTTAGCCCAGGTGG+TGG | + | chr2_1:5683189-5683208 | Msa0190240:CDS | 45.0% |
| ATGGCTGTAGGAAATGCTTC+AGG | + | chr2_1:5683216-5683235 | Msa0190240:CDS | 45.0% | |
| TCCCCCTTTCCAAATTCAGG+AGG | - | chr2_1:5681830-5681849 | None:intergenic | 50.0% | |
| ! | TGGAAAGGGGGATGATGATG+AGG | + | chr2_1:5681838-5681857 | Msa0190240:CDS | 50.0% |
| ! | AAAGGGGGATGATGATGAGG+TGG | + | chr2_1:5681841-5681860 | Msa0190240:CDS | 50.0% |
| TGAGGCGACTATCTGCAGAA+CGG | - | chr2_1:5681910-5681929 | None:intergenic | 50.0% | |
| GTTAAGGAAGGAGGAGGATG+AGG | + | chr2_1:5682063-5682082 | Msa0190240:CDS | 50.0% | |
| AATAAAGCTGCTGTGAGCCG+AGG | + | chr2_1:5682223-5682242 | Msa0190240:CDS | 50.0% | |
| CATCCAGATCCTCGTAACCT+CGG | - | chr2_1:5682243-5682262 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | - | chr2_1:5682399-5682418 | None:intergenic | 50.0% | |
| TTCTCTTCCCTACCCAACAG+CGG | - | chr2_1:5682622-5682641 | None:intergenic | 50.0% | |
| !! | TTGTTAAGCGCTGGTGGTGA+TGG | + | chr2_1:5682805-5682824 | Msa0190240:CDS | 50.0% |
| GCTGCAAAATGTGTCCCTAC+TGG | - | chr2_1:5682922-5682941 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | + | chr2_1:5682922-5682941 | Msa0190240:CDS | 50.0% |
| ! | TTTGCAGCTGGTTCAGCTAG+TGG | + | chr2_1:5682934-5682953 | Msa0190240:CDS | 50.0% |
| !! | TAGCCCAGGTGGTGGTTTTA+TGG | + | chr2_1:5683197-5683216 | Msa0190240:CDS | 50.0% |
| CAGCCATAAAACCACCACCT+GGG | - | chr2_1:5683203-5683222 | None:intergenic | 50.0% | |
| ACAGCCATAAAACCACCACC+TGG | - | chr2_1:5683204-5683223 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | + | chr2_1:5683204-5683223 | Msa0190240:CDS | 50.0% |
| TCCCCCTTTCCAAATTCAGG+AGG | - | chr2_1:5681830-5681849 | None:intergenic | 50.0% | |
| ! | TGGAAAGGGGGATGATGATG+AGG | + | chr2_1:5681838-5681857 | Msa0190240:CDS | 50.0% |
| ! | AAAGGGGGATGATGATGAGG+TGG | + | chr2_1:5681841-5681860 | Msa0190240:CDS | 50.0% |
| TGAGGCGACTATCTGCAGAA+CGG | - | chr2_1:5681910-5681929 | None:intergenic | 50.0% | |
| GTTAAGGAAGGAGGAGGATG+AGG | + | chr2_1:5682063-5682082 | Msa0190240:CDS | 50.0% | |
| AATAAAGCTGCTGTGAGCCG+AGG | + | chr2_1:5682223-5682242 | Msa0190240:CDS | 50.0% | |
| CATCCAGATCCTCGTAACCT+CGG | - | chr2_1:5682243-5682262 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | - | chr2_1:5682399-5682418 | None:intergenic | 50.0% | |
| TTCTCTTCCCTACCCAACAG+CGG | - | chr2_1:5682622-5682641 | None:intergenic | 50.0% | |
| !! | TTGTTAAGCGCTGGTGGTGA+TGG | + | chr2_1:5682805-5682824 | Msa0190240:CDS | 50.0% |
| GCTGCAAAATGTGTCCCTAC+TGG | - | chr2_1:5682922-5682941 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | + | chr2_1:5682922-5682941 | Msa0190240:CDS | 50.0% |
| ! | TTTGCAGCTGGTTCAGCTAG+TGG | + | chr2_1:5682934-5682953 | Msa0190240:CDS | 50.0% |
| !! | TAGCCCAGGTGGTGGTTTTA+TGG | + | chr2_1:5683197-5683216 | Msa0190240:CDS | 50.0% |
| CAGCCATAAAACCACCACCT+GGG | - | chr2_1:5683203-5683222 | None:intergenic | 50.0% | |
| ACAGCCATAAAACCACCACC+TGG | - | chr2_1:5683204-5683223 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | + | chr2_1:5683204-5683223 | Msa0190240:CDS | 50.0% |
| ! | TGATGATGAGGTGGATGCCG+CGG | + | chr2_1:5681850-5681869 | Msa0190240:CDS | 55.0% |
| AGAAGCCTTTGCAGAAGCCG+CGG | - | chr2_1:5681870-5681889 | None:intergenic | 55.0% | |
| GAAAAGAAAGCCGGTGTGGG+TGG | + | chr2_1:5681985-5682004 | Msa0190240:CDS | 55.0% | |
| TCTTCCTCATCCACCCACAC+CGG | - | chr2_1:5681998-5682017 | None:intergenic | 55.0% | |
| CAGCATGCAAAGCTCAACCG+AGG | + | chr2_1:5682127-5682146 | Msa0190240:CDS | 55.0% | |
| AGCTCAACCGAGGAACTGAC+TGG | + | chr2_1:5682137-5682156 | Msa0190240:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | + | chr2_1:5682138-5682157 | Msa0190240:CDS | 55.0% | |
| TTTCTTGCCCGATGGGTCTC+AGG | + | chr2_1:5682525-5682544 | Msa0190240:CDS | 55.0% | |
| ! | AGATTGGTCCGCTGTTGGGT+AGG | + | chr2_1:5682611-5682630 | Msa0190240:CDS | 55.0% |
| ! | GATTGGTCCGCTGTTGGGTA+GGG | + | chr2_1:5682612-5682631 | Msa0190240:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | - | chr2_1:5683156-5683175 | None:intergenic | 55.0% | |
| ! | TGATGATGAGGTGGATGCCG+CGG | + | chr2_1:5681850-5681869 | Msa0190240:CDS | 55.0% |
| AGAAGCCTTTGCAGAAGCCG+CGG | - | chr2_1:5681870-5681889 | None:intergenic | 55.0% | |
| GAAAAGAAAGCCGGTGTGGG+TGG | + | chr2_1:5681985-5682004 | Msa0190240:CDS | 55.0% | |
| TCTTCCTCATCCACCCACAC+CGG | - | chr2_1:5681998-5682017 | None:intergenic | 55.0% | |
| CAGCATGCAAAGCTCAACCG+AGG | + | chr2_1:5682127-5682146 | Msa0190240:CDS | 55.0% | |
| AGCTCAACCGAGGAACTGAC+TGG | + | chr2_1:5682137-5682156 | Msa0190240:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | + | chr2_1:5682138-5682157 | Msa0190240:CDS | 55.0% | |
| TTTCTTGCCCGATGGGTCTC+AGG | + | chr2_1:5682525-5682544 | Msa0190240:CDS | 55.0% | |
| ! | AGATTGGTCCGCTGTTGGGT+AGG | + | chr2_1:5682611-5682630 | Msa0190240:CDS | 55.0% |
| ! | GATTGGTCCGCTGTTGGGTA+GGG | + | chr2_1:5682612-5682631 | Msa0190240:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | - | chr2_1:5683156-5683175 | None:intergenic | 55.0% | |
| AAAGCCGGTGTGGGTGGATG+AGG | + | chr2_1:5681991-5682010 | Msa0190240:CDS | 60.0% | |
| ACTGGGCGCAGCTGGATTCA+GGG | + | chr2_1:5682155-5682174 | Msa0190240:CDS | 60.0% | |
| TGCTGTGAGCCGAGGTTACG+AGG | + | chr2_1:5682231-5682250 | Msa0190240:CDS | 60.0% | |
| GAGCCGAGGTTACGAGGATC+TGG | + | chr2_1:5682237-5682256 | Msa0190240:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | + | chr2_1:5682406-5682425 | Msa0190240:CDS | 60.0% | |
| AAAGCCGGTGTGGGTGGATG+AGG | + | chr2_1:5681991-5682010 | Msa0190240:CDS | 60.0% | |
| ACTGGGCGCAGCTGGATTCA+GGG | + | chr2_1:5682155-5682174 | Msa0190240:CDS | 60.0% | |
| TGCTGTGAGCCGAGGTTACG+AGG | + | chr2_1:5682231-5682250 | Msa0190240:CDS | 60.0% | |
| GAGCCGAGGTTACGAGGATC+TGG | + | chr2_1:5682237-5682256 | Msa0190240:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | + | chr2_1:5682406-5682425 | Msa0190240:CDS | 60.0% | |
| GGATGCCGCGGCTTCTGCAA+AGG | + | chr2_1:5681862-5681881 | Msa0190240:CDS | 65.0% | |
| GCTGCGCCCAGTCAGTTCCT+CGG | - | chr2_1:5682147-5682166 | None:intergenic | 65.0% | |
| AGGAACTGACTGGGCGCAGC+TGG | + | chr2_1:5682147-5682166 | Msa0190240:CDS | 65.0% | |
| GACTGGGCGCAGCTGGATTC+AGG | + | chr2_1:5682154-5682173 | Msa0190240:CDS | 65.0% | |
| GGATGCCGCGGCTTCTGCAA+AGG | + | chr2_1:5681862-5681881 | Msa0190240:CDS | 65.0% | |
| GCTGCGCCCAGTCAGTTCCT+CGG | - | chr2_1:5682147-5682166 | None:intergenic | 65.0% | |
| AGGAACTGACTGGGCGCAGC+TGG | + | chr2_1:5682147-5682166 | Msa0190240:CDS | 65.0% | |
| GACTGGGCGCAGCTGGATTC+AGG | + | chr2_1:5682154-5682173 | Msa0190240:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 5681614 | 5683281 | 5681614 | ID=Msa0190240;Name=Msa0190240 |
| chr2_1 | mRNA | 5681614 | 5683281 | 5681614 | ID=Msa0190240-mRNA-1;Parent=Msa0190240;Name=Msa0190240-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|555 |
| chr2_1 | exon | 5681614 | 5683281 | 5681614 | ID=Msa0190240-mRNA-1:exon:2525;Parent=Msa0190240-mRNA-1 |
| chr2_1 | CDS | 5681614 | 5683281 | 5681614 | ID=Msa0190240-mRNA-1:cds;Parent=Msa0190240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
