Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272070 | XP_003593289.1 | 98.739 | 555 | 7 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272070 | sp|Q9FMU5|UTP18_ARATH | 62.478 | 565 | 183 | 11 | 1 | 555 | 1 | 546 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272070 | G7IS79 | 98.739 | 555 | 7 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1129 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0190240 | Msa0272070 | 0.912422 | 1.982786e-83 | -8.615850e-47 |
| Msa0232420 | Msa0272070 | 0.998632 | 3.974076e-271 | -8.615850e-47 |
| Msa0272070 | Msa0403710 | 0.806869 | 6.672183e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272070 | MtrunA17_Chr2g0331501 | 91.532 | 555 | 47 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1053 |
| Msa0272070 | MtrunA17_Chr2g0279781 | 91.532 | 555 | 6 | 1 | 1 | 555 | 1 | 514 | 0.0 | 1029 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272070 | AT5G14050.1 | 62.478 | 565 | 183 | 11 | 1 | 555 | 1 | 546 | 0.0 | 676 |
Find 114 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTATTCACCTCCTGAATT+TGG | 0.168421 | 2_3:-3610926 | Msa0272070:CDS |
| GACTGGGCGCAGCTGGATTC+AGG | 0.199184 | 2_3:-3610590 | Msa0272070:CDS |
| ATGGAACTGAACTGAATTAA+TGG | 0.221155 | 2_3:+3610367 | None:intergenic |
| GAGGATGAGGATTTGATATC+TGG | 0.277710 | 2_3:-3610668 | Msa0272070:CDS |
| TAGCCAAAGTCAACAGATTA+AGG | 0.291410 | 2_3:-3610706 | Msa0272070:CDS |
| CTGAGAAGTCAGCATCTTCT+TGG | 0.323321 | 2_3:+3610807 | None:intergenic |
| AAAGCTATCATTTGAGAATC+AGG | 0.336697 | 2_3:+3610077 | None:intergenic |
| AAGGAAGATACTTTCAATCT+TGG | 0.340340 | 2_3:+3610268 | None:intergenic |
| GAAGAGTATTGAAGTGTTTG+AGG | 0.342182 | 2_3:-3610105 | Msa0272070:CDS |
| AGATTATCAATGGTCTTGAT+AGG | 0.358024 | 2_3:+3609738 | None:intergenic |
| TACTTCAGGCATGGTGATAA+TGG | 0.362722 | 2_3:+3609481 | None:intergenic |
| GGTCAGCTGCTTCTTGCTGC+TGG | 0.365476 | 2_3:-3610338 | Msa0272070:CDS |
| TCAACAGATTAAGGAAGTTA+AGG | 0.371537 | 2_3:-3610697 | Msa0272070:CDS |
| AGGAACTGACTGGGCGCAGC+TGG | 0.391668 | 2_3:-3610597 | Msa0272070:CDS |
| GTTAAGGAAGGAGGAGGATG+AGG | 0.392451 | 2_3:-3610681 | Msa0272070:CDS |
| TGGGCTAAAATCAATACAAC+GGG | 0.399262 | 2_3:+3609563 | None:intergenic |
| TGGAACTGAACTGAATTAAT+GGG | 0.402013 | 2_3:+3610368 | None:intergenic |
| CTTCCTTAATCTGTTGACTT+TGG | 0.407960 | 2_3:+3610703 | None:intergenic |
| GGGTCTCATGTGATAATATC+AGG | 0.415547 | 2_3:-3610206 | Msa0272070:CDS |
| ATGGCTGTAGGAAATGCTTC+AGG | 0.420095 | 2_3:-3609528 | Msa0272070:CDS |
| TTATAGTCTTGATTTAGTTA+AGG | 0.420893 | 2_3:-3610168 | Msa0272070:CDS |
| TTCGAATGGGGCAATCTTCA+AGG | 0.424695 | 2_3:+3610249 | None:intergenic |
| TCAGTTCAGTTCCATCGAAA+TGG | 0.438541 | 2_3:-3610359 | Msa0272070:CDS |
| AAATACTAGCAATCTGTTCA+AGG | 0.442805 | 2_3:-3609674 | Msa0272070:CDS |
| TTCAGTATTCAGATTATCAA+TGG | 0.445525 | 2_3:+3609728 | None:intergenic |
| AATATACAAGATCCCGCTAA+TGG | 0.453091 | 2_3:-3610392 | Msa0272070:CDS |
| TACAATAGCGAGGAATTTCT+CGG | 0.460074 | 2_3:-3609774 | Msa0272070:CDS |
| GAGCCGAGGTTACGAGGATC+TGG | 0.461776 | 2_3:-3610507 | Msa0272070:CDS |
| GTAGATGAAGGCTGTTTAAA+CGG | 0.466326 | 2_3:-3609867 | Msa0272070:CDS |
| TCACCTCCTGAATTTGGAAA+GGG | 0.467907 | 2_3:-3610920 | Msa0272070:CDS |
| GCTGCAAAATGTGTCCCTAC+TGG | 0.467974 | 2_3:+3609825 | None:intergenic |
| AAGGCTAGAGTTGATAAGAT+TGG | 0.470242 | 2_3:-3610149 | Msa0272070:CDS |
| AGCTCAACCGAGGAACTGAC+TGG | 0.472580 | 2_3:-3610607 | Msa0272070:CDS |
| TGATGGTCATATTTACCATT+GGG | 0.474225 | 2_3:-3609922 | Msa0272070:CDS |
| GATAAGATTGGTCCGCTGTT+GGG | 0.475592 | 2_3:-3610137 | Msa0272070:CDS |
| ACTGGGCGCAGCTGGATTCA+GGG | 0.478998 | 2_3:-3610589 | Msa0272070:CDS |
| AAGCATCTTTCTTGCCCGAT+GGG | 0.479466 | 2_3:-3610226 | Msa0272070:CDS |
| TTTGCAGCTGGTTCAGCTAG+TGG | 0.484592 | 2_3:-3609810 | Msa0272070:CDS |
| GTGATGGTCATATTTACCAT+TGG | 0.489547 | 2_3:-3609923 | Msa0272070:CDS |
| AAGGAAGTTAAGGAAGGAGG+AGG | 0.489554 | 2_3:-3610687 | Msa0272070:CDS |
| AAAGCCGGTGTGGGTGGATG+AGG | 0.489666 | 2_3:-3610753 | Msa0272070:CDS |
| CAGAGTATGTGTCAAGATTG+AGG | 0.492768 | 2_3:-3610643 | Msa0272070:CDS |
| ACAAAGTCGAAGCAATTAGT+TGG | 0.498298 | 2_3:-3610020 | Msa0272070:CDS |
| ACAATAGCGAGGAATTTCTC+GGG | 0.503579 | 2_3:-3609773 | Msa0272070:CDS |
| AGAGTATGTGTCAAGATTGA+GGG | 0.513752 | 2_3:-3610642 | Msa0272070:CDS |
| GAATTAATGGGACCATTAGC+GGG | 0.514356 | 2_3:+3610380 | None:intergenic |
| TGATAAGATTGGTCCGCTGT+TGG | 0.514998 | 2_3:-3610138 | Msa0272070:CDS |
| GATTGGTCCGCTGTTGGGTA+GGG | 0.516250 | 2_3:-3610132 | Msa0272070:CDS |
| GGATGCCGCGGCTTCTGCAA+AGG | 0.518753 | 2_3:-3610882 | Msa0272070:CDS |
| GCTGCGCCCAGTCAGTTCCT+CGG | 0.520974 | 2_3:+3610600 | None:intergenic |
| TGAATTAATGGGACCATTAG+CGG | 0.525771 | 2_3:+3610379 | None:intergenic |
| ATTAAGGAAGTTAAGGAAGG+AGG | 0.530708 | 2_3:-3610690 | Msa0272070:CDS |
| GGTGGATGAGGAAGAAGAAA+AGG | 0.532095 | 2_3:-3610741 | Msa0272070:CDS |
| TTCGAGTATTCAAGATGTCC+TGG | 0.533881 | 2_3:+3610428 | None:intergenic |
| AAAGGAAATGAGGTTGAAGA+TGG | 0.535620 | 2_3:-3611070 | Msa0272070:CDS |
| AGATTGGTCCGCTGTTGGGT+AGG | 0.539038 | 2_3:-3610133 | Msa0272070:CDS |
| TTCACCTCCTGAATTTGGAA+AGG | 0.542160 | 2_3:-3610921 | Msa0272070:CDS |
| GCTCTTTGTACTTCTCCAGT+AGG | 0.543723 | 2_3:-3609840 | Msa0272070:CDS |
| AGATGGAAAGGAAGAACAGT+TGG | 0.550771 | 2_3:-3611002 | Msa0272070:CDS |
| TTGAGCTACTCTTCACAACC+AGG | 0.551752 | 2_3:+3610459 | None:intergenic |
| CAATACAACGGGGATAATGC+AGG | 0.553209 | 2_3:+3609574 | None:intergenic |
| AAAGAGGAAGCTAGATGGAA+AGG | 0.553316 | 2_3:-3611014 | Msa0272070:CDS |
| TGATAATCTGAATACTGAAG+TGG | 0.554817 | 2_3:-3609724 | Msa0272070:CDS |
| TTGTTAAGCGCTGGTGGTGA+TGG | 0.557212 | 2_3:-3609939 | Msa0272070:CDS |
| AAAGCATCTTTCTTGCCCGA+TGG | 0.557386 | 2_3:-3610227 | Msa0272070:CDS |
| TTCTTGCTGCTGGATTAGAC+CGG | 0.558175 | 2_3:-3610328 | Msa0272070:CDS |
| AAATGAGGTTGAAGATGGGA+AGG | 0.558756 | 2_3:-3611065 | Msa0272070:CDS |
| AAGGAAATGAGGTTGAAGAT+GGG | 0.562237 | 2_3:-3611069 | Msa0272070:CDS |
| AGTAGCTCAAAATTGTTGCC+AGG | 0.564255 | 2_3:-3610446 | Msa0272070:CDS |
| GGAGTTTGATGTTGATACTG+AGG | 0.566399 | 2_3:-3611044 | Msa0272070:CDS |
| CTCTTTGTACTTCTCCAGTA+GGG | 0.567092 | 2_3:-3609839 | Msa0272070:CDS |
| CAGATTAAGGAAGTTAAGGA+AGG | 0.571312 | 2_3:-3610693 | Msa0272070:CDS |
| ACCTCCTGAATTTGGAAAGG+GGG | 0.574743 | 2_3:-3610918 | Msa0272070:CDS |
| TGCTGTGAGCCGAGGTTACG+AGG | 0.576924 | 2_3:-3610513 | Msa0272070:CDS |
| CATCCAGATCCTCGTAACCT+CGG | 0.587962 | 2_3:+3610504 | None:intergenic |
| ATTATCACATGAGACCCATC+GGG | 0.588919 | 2_3:+3610212 | None:intergenic |
| AATACTAGCAATCTGTTCAA+GGG | 0.593971 | 2_3:-3609673 | Msa0272070:CDS |
| GGAAGTTGTGAAAGGAAATG+AGG | 0.594864 | 2_3:-3611080 | Msa0272070:CDS |
| TTTCTGATCTACTTCAGGCA+TGG | 0.600646 | 2_3:+3609472 | None:intergenic |
| TATTATCACATGAGACCCAT+CGG | 0.603056 | 2_3:+3610211 | None:intergenic |
| GAAGCAGCTGACCATTTCGA+TGG | 0.604108 | 2_3:+3610348 | None:intergenic |
| ATACACAAAGGTGTAGATGA+AGG | 0.605326 | 2_3:-3609879 | Msa0272070:CDS |
| CTTCAGTAAAAGCTAATGAA+CGG | 0.605560 | 2_3:+3609973 | None:intergenic |
| TGTGAATATTTACAATAGCG+AGG | 0.608077 | 2_3:-3609784 | Msa0272070:CDS |
| AAAAGGGAGGAAGTTGTGAA+AGG | 0.616065 | 2_3:-3611088 | Msa0272070:CDS |
| AATAAAGCTGCTGTGAGCCG+AGG | 0.616455 | 2_3:-3610521 | Msa0272070:CDS |
| AGAAGCCTTTGCAGAAGCCG+CGG | 0.617253 | 2_3:+3610877 | None:intergenic |
| TCTCAGAACAAATGAAGACC+TGG | 0.621951 | 2_3:-3610477 | Msa0272070:CDS |
| ACCATTGGGATCTGAGAACA+AGG | 0.623692 | 2_3:-3609908 | Msa0272070:CDS |
| CTGGGCTAAAATCAATACAA+CGG | 0.628701 | 2_3:+3609562 | None:intergenic |
| ACAGCCATAAAACCACCACC+TGG | 0.630227 | 2_3:+3609543 | None:intergenic |
| TGATGATGAGGTGGATGCCG+CGG | 0.633167 | 2_3:-3610894 | Msa0272070:CDS |
| AAAGGAAGAACAGTTGGCAA+AGG | 0.637301 | 2_3:-3610996 | Msa0272070:CDS |
| CACCTCCTGAATTTGGAAAG+GGG | 0.637398 | 2_3:-3610919 | Msa0272070:CDS |
| GCTCAACCGAGGAACTGACT+GGG | 0.639373 | 2_3:-3610606 | Msa0272070:CDS |
| CCAGTTAGAGAAAACAGTGT+AGG | 0.639938 | 2_3:+3609614 | None:intergenic |
| GTTGGTACTCTGAAGATGAA+CGG | 0.640176 | 2_3:-3610002 | Msa0272070:CDS |
| TTAGAGAAAACAGTGTAGGA+TGG | 0.640295 | 2_3:+3609618 | None:intergenic |
| CAATAGCGAGGAATTTCTCG+GGG | 0.640898 | 2_3:-3609772 | Msa0272070:CDS |
| GAAAAGAAAGCCGGTGTGGG+TGG | 0.643363 | 2_3:-3610759 | Msa0272070:CDS |
| TGCAGGCTCGCATTTGAACG+CGG | 0.645712 | 2_3:+3609591 | None:intergenic |
| TCTTCCTCATCCACCCACAC+CGG | 0.648855 | 2_3:+3610749 | None:intergenic |
| CTTTGAAAAGAAAGCCGGTG+TGG | 0.649038 | 2_3:-3610763 | Msa0272070:CDS |
| TTCTCTTCCCTACCCAACAG+CGG | 0.649632 | 2_3:+3610125 | None:intergenic |
| TGATGCTTTGAAAAGAAAGC+CGG | 0.651576 | 2_3:-3610768 | Msa0272070:CDS |
| CAGCCATAAAACCACCACCT+GGG | 0.668450 | 2_3:+3609544 | None:intergenic |
| CATCTTCTTGGTAAACAGTG+AGG | 0.681529 | 2_3:+3610819 | None:intergenic |
| TGAGGAGACTATCTGCAGAA+CGG | 0.693456 | 2_3:+3610837 | None:intergenic |
| TTTGAAAAGAAAGCCGGTGT+GGG | 0.693980 | 2_3:-3610762 | Msa0272070:CDS |
| ACAAGGACTTGTATACACAA+AGG | 0.694652 | 2_3:-3609891 | Msa0272070:CDS |
| CAGCATGCAAAGCTCAACCG+AGG | 0.712589 | 2_3:-3610617 | Msa0272070:CDS |
| TCCTTGTTCTCAGATCCCAA+TGG | 0.719029 | 2_3:+3609907 | None:intergenic |
| AATAGCGAGGAATTTCTCGG+GGG | 0.758971 | 2_3:-3609771 | Msa0272070:CDS |
| GGGCTAAAATCAATACAACG+GGG | 0.814054 | 2_3:+3609564 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAAATTTTTTCAAATTGA+TGG | - | chr2_3:3610313-3610332 | Msa0272070:CDS | 15.0% |
| !!! | CTTAAATTTTTTCAAATTGA+TGG | - | chr2_3:3610313-3610332 | Msa0272070:CDS | 15.0% |
| !! | TTTGAAAAAATTTAAGCTTC+CGG | + | chr2_3:3610309-3610328 | None:intergenic | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | - | chr2_3:3610447-3610466 | Msa0272070:CDS | 20.0% |
| !! | TTTGAAAAAATTTAAGCTTC+CGG | + | chr2_3:3610309-3610328 | None:intergenic | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | - | chr2_3:3610447-3610466 | Msa0272070:CDS | 20.0% |
| !!! | TTTTTCAAATTGATGGCAAA+CGG | - | chr2_3:3610320-3610339 | Msa0272070:CDS | 25.0% |
| !! | CAATGAAGGTTATATTTTAC+TGG | - | chr2_3:3610567-3610586 | Msa0272070:CDS | 25.0% |
| ! | TTCAGTATTCAGATTATCAA+TGG | + | chr2_3:3610890-3610909 | None:intergenic | 25.0% |
| !!! | TTTTTCAAATTGATGGCAAA+CGG | - | chr2_3:3610320-3610339 | Msa0272070:CDS | 25.0% |
| !! | CAATGAAGGTTATATTTTAC+TGG | - | chr2_3:3610567-3610586 | Msa0272070:CDS | 25.0% |
| ! | TTCAGTATTCAGATTATCAA+TGG | + | chr2_3:3610890-3610909 | None:intergenic | 25.0% |
| ! | CTCTAAAAATGAGACGAAAA+GGG | - | chr2_3:3609511-3609530 | Msa0272070:CDS | 30.0% |
| TCAACAGATTAAGGAAGTTA+AGG | - | chr2_3:3609918-3609937 | Msa0272070:CDS | 30.0% | |
| TGGAACTGAACTGAATTAAT+GGG | + | chr2_3:3610250-3610269 | None:intergenic | 30.0% | |
| ATGGAACTGAACTGAATTAA+TGG | + | chr2_3:3610251-3610270 | None:intergenic | 30.0% | |
| AAGGAAGATACTTTCAATCT+TGG | + | chr2_3:3610350-3610369 | None:intergenic | 30.0% | |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | + | chr2_3:3610382-3610401 | None:intergenic | 30.0% |
| AAAGCTATCATTTGAGAATC+AGG | + | chr2_3:3610541-3610560 | None:intergenic | 30.0% | |
| ! | TTCTCAAATGATAGCTTTTG+TGG | - | chr2_3:3610543-3610562 | Msa0272070:CDS | 30.0% |
| ! | TCTCAAATGATAGCTTTTGT+GGG | - | chr2_3:3610544-3610563 | Msa0272070:CDS | 30.0% |
| CTTCAGTAAAAGCTAATGAA+CGG | + | chr2_3:3610645-3610664 | None:intergenic | 30.0% | |
| !!! | TCATTAGCTTTTACTGAAGA+TGG | - | chr2_3:3610646-3610665 | Msa0272070:CDS | 30.0% |
| TGATGGTCATATTTACCATT+GGG | - | chr2_3:3610693-3610712 | Msa0272070:CDS | 30.0% | |
| TGTGAATATTTACAATAGCG+AGG | - | chr2_3:3610831-3610850 | Msa0272070:CDS | 30.0% | |
| ! | AGATTATCAATGGTCTTGAT+AGG | + | chr2_3:3610880-3610899 | None:intergenic | 30.0% |
| TGATAATCTGAATACTGAAG+TGG | - | chr2_3:3610891-3610910 | Msa0272070:CDS | 30.0% | |
| AAATACTAGCAATCTGTTCA+AGG | - | chr2_3:3610941-3610960 | Msa0272070:CDS | 30.0% | |
| AATACTAGCAATCTGTTCAA+GGG | - | chr2_3:3610942-3610961 | Msa0272070:CDS | 30.0% | |
| ! | CTCTAAAAATGAGACGAAAA+GGG | - | chr2_3:3609511-3609530 | Msa0272070:CDS | 30.0% |
| TCAACAGATTAAGGAAGTTA+AGG | - | chr2_3:3609918-3609937 | Msa0272070:CDS | 30.0% | |
| TGGAACTGAACTGAATTAAT+GGG | + | chr2_3:3610250-3610269 | None:intergenic | 30.0% | |
| ATGGAACTGAACTGAATTAA+TGG | + | chr2_3:3610251-3610270 | None:intergenic | 30.0% | |
| AAGGAAGATACTTTCAATCT+TGG | + | chr2_3:3610350-3610369 | None:intergenic | 30.0% | |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | + | chr2_3:3610382-3610401 | None:intergenic | 30.0% |
| AAAGCTATCATTTGAGAATC+AGG | + | chr2_3:3610541-3610560 | None:intergenic | 30.0% | |
| ! | TTCTCAAATGATAGCTTTTG+TGG | - | chr2_3:3610543-3610562 | Msa0272070:CDS | 30.0% |
| ! | TCTCAAATGATAGCTTTTGT+GGG | - | chr2_3:3610544-3610563 | Msa0272070:CDS | 30.0% |
| CTTCAGTAAAAGCTAATGAA+CGG | + | chr2_3:3610645-3610664 | None:intergenic | 30.0% | |
| !!! | TCATTAGCTTTTACTGAAGA+TGG | - | chr2_3:3610646-3610665 | Msa0272070:CDS | 30.0% |
| TGATGGTCATATTTACCATT+GGG | - | chr2_3:3610693-3610712 | Msa0272070:CDS | 30.0% | |
| TGTGAATATTTACAATAGCG+AGG | - | chr2_3:3610831-3610850 | Msa0272070:CDS | 30.0% | |
| ! | AGATTATCAATGGTCTTGAT+AGG | + | chr2_3:3610880-3610899 | None:intergenic | 30.0% |
| TGATAATCTGAATACTGAAG+TGG | - | chr2_3:3610891-3610910 | Msa0272070:CDS | 30.0% | |
| AAATACTAGCAATCTGTTCA+AGG | - | chr2_3:3610941-3610960 | Msa0272070:CDS | 30.0% | |
| AATACTAGCAATCTGTTCAA+GGG | - | chr2_3:3610942-3610961 | Msa0272070:CDS | 30.0% | |
| !! | GCTCTAAAAATGAGACGAAA+AGG | - | chr2_3:3609510-3609529 | Msa0272070:CDS | 35.0% |
| TAAAAATGAGACGAAAAGGG+AGG | - | chr2_3:3609514-3609533 | Msa0272070:CDS | 35.0% | |
| AAAGGAAATGAGGTTGAAGA+TGG | - | chr2_3:3609545-3609564 | Msa0272070:CDS | 35.0% | |
| AAGGAAATGAGGTTGAAGAT+GGG | - | chr2_3:3609546-3609565 | Msa0272070:CDS | 35.0% | |
| ATACTGAGGAAACGAAAAAG+AGG | - | chr2_3:3609585-3609604 | Msa0272070:CDS | 35.0% | |
| ! | AAGCTTGAGAGCTTTTTGTT+TGG | - | chr2_3:3609662-3609681 | Msa0272070:CDS | 35.0% |
| !! | AGCTTGAGAGCTTTTTGTTT+GGG | - | chr2_3:3609663-3609682 | Msa0272070:CDS | 35.0% |
| !! | TGATGCTTTGAAAAGAAAGC+CGG | - | chr2_3:3609847-3609866 | Msa0272070:CDS | 35.0% |
| TAGCCAAAGTCAACAGATTA+AGG | - | chr2_3:3609909-3609928 | Msa0272070:CDS | 35.0% | |
| !! | CTTCCTTAATCTGTTGACTT+TGG | + | chr2_3:3609915-3609934 | None:intergenic | 35.0% |
| CAGATTAAGGAAGTTAAGGA+AGG | - | chr2_3:3609922-3609941 | Msa0272070:CDS | 35.0% | |
| ATTAAGGAAGTTAAGGAAGG+AGG | - | chr2_3:3609925-3609944 | Msa0272070:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | - | chr2_3:3609973-3609992 | Msa0272070:CDS | 35.0% | |
| AATATACAAGATCCCGCTAA+TGG | - | chr2_3:3610223-3610242 | Msa0272070:CDS | 35.0% | |
| TGAATTAATGGGACCATTAG+CGG | + | chr2_3:3610239-3610258 | None:intergenic | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | + | chr2_3:3610381-3610400 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | + | chr2_3:3610383-3610402 | None:intergenic | 35.0% |
| TATTATCACATGAGACCCAT+CGG | + | chr2_3:3610407-3610426 | None:intergenic | 35.0% | |
| !! | AAGGCTAGAGTTGATAAGAT+TGG | - | chr2_3:3610466-3610485 | Msa0272070:CDS | 35.0% |
| !! | GAAGAGTATTGAAGTGTTTG+AGG | - | chr2_3:3610510-3610529 | Msa0272070:CDS | 35.0% |
| ACAAAGTCGAAGCAATTAGT+TGG | - | chr2_3:3610595-3610614 | Msa0272070:CDS | 35.0% | |
| GTGATGGTCATATTTACCAT+TGG | - | chr2_3:3610692-3610711 | Msa0272070:CDS | 35.0% | |
| ACAAGGACTTGTATACACAA+AGG | - | chr2_3:3610724-3610743 | Msa0272070:CDS | 35.0% | |
| ! | ATACACAAAGGTGTAGATGA+AGG | - | chr2_3:3610736-3610755 | Msa0272070:CDS | 35.0% |
| GTAGATGAAGGCTGTTTAAA+CGG | - | chr2_3:3610748-3610767 | Msa0272070:CDS | 35.0% | |
| TACAATAGCGAGGAATTTCT+CGG | - | chr2_3:3610841-3610860 | Msa0272070:CDS | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | + | chr2_3:3611000-3611019 | None:intergenic | 35.0% | |
| TGGGCTAAAATCAATACAAC+GGG | + | chr2_3:3611055-3611074 | None:intergenic | 35.0% | |
| CTGGGCTAAAATCAATACAA+CGG | + | chr2_3:3611056-3611075 | None:intergenic | 35.0% | |
| !! | GCTCTAAAAATGAGACGAAA+AGG | - | chr2_3:3609510-3609529 | Msa0272070:CDS | 35.0% |
| TAAAAATGAGACGAAAAGGG+AGG | - | chr2_3:3609514-3609533 | Msa0272070:CDS | 35.0% | |
| AAAGGAAATGAGGTTGAAGA+TGG | - | chr2_3:3609545-3609564 | Msa0272070:CDS | 35.0% | |
| AAGGAAATGAGGTTGAAGAT+GGG | - | chr2_3:3609546-3609565 | Msa0272070:CDS | 35.0% | |
| ATACTGAGGAAACGAAAAAG+AGG | - | chr2_3:3609585-3609604 | Msa0272070:CDS | 35.0% | |
| ! | AAGCTTGAGAGCTTTTTGTT+TGG | - | chr2_3:3609662-3609681 | Msa0272070:CDS | 35.0% |
| !! | AGCTTGAGAGCTTTTTGTTT+GGG | - | chr2_3:3609663-3609682 | Msa0272070:CDS | 35.0% |
| !! | TGATGCTTTGAAAAGAAAGC+CGG | - | chr2_3:3609847-3609866 | Msa0272070:CDS | 35.0% |
| TAGCCAAAGTCAACAGATTA+AGG | - | chr2_3:3609909-3609928 | Msa0272070:CDS | 35.0% | |
| !! | CTTCCTTAATCTGTTGACTT+TGG | + | chr2_3:3609915-3609934 | None:intergenic | 35.0% |
| CAGATTAAGGAAGTTAAGGA+AGG | - | chr2_3:3609922-3609941 | Msa0272070:CDS | 35.0% | |
| ATTAAGGAAGTTAAGGAAGG+AGG | - | chr2_3:3609925-3609944 | Msa0272070:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | - | chr2_3:3609973-3609992 | Msa0272070:CDS | 35.0% | |
| AATATACAAGATCCCGCTAA+TGG | - | chr2_3:3610223-3610242 | Msa0272070:CDS | 35.0% | |
| TGAATTAATGGGACCATTAG+CGG | + | chr2_3:3610239-3610258 | None:intergenic | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | + | chr2_3:3610381-3610400 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | + | chr2_3:3610383-3610402 | None:intergenic | 35.0% |
| TATTATCACATGAGACCCAT+CGG | + | chr2_3:3610407-3610426 | None:intergenic | 35.0% | |
| !! | AAGGCTAGAGTTGATAAGAT+TGG | - | chr2_3:3610466-3610485 | Msa0272070:CDS | 35.0% |
| !! | GAAGAGTATTGAAGTGTTTG+AGG | - | chr2_3:3610510-3610529 | Msa0272070:CDS | 35.0% |
| ACAAAGTCGAAGCAATTAGT+TGG | - | chr2_3:3610595-3610614 | Msa0272070:CDS | 35.0% | |
| GTGATGGTCATATTTACCAT+TGG | - | chr2_3:3610692-3610711 | Msa0272070:CDS | 35.0% | |
| ACAAGGACTTGTATACACAA+AGG | - | chr2_3:3610724-3610743 | Msa0272070:CDS | 35.0% | |
| ! | ATACACAAAGGTGTAGATGA+AGG | - | chr2_3:3610736-3610755 | Msa0272070:CDS | 35.0% |
| GTAGATGAAGGCTGTTTAAA+CGG | - | chr2_3:3610748-3610767 | Msa0272070:CDS | 35.0% | |
| TACAATAGCGAGGAATTTCT+CGG | - | chr2_3:3610841-3610860 | Msa0272070:CDS | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | + | chr2_3:3611000-3611019 | None:intergenic | 35.0% | |
| TGGGCTAAAATCAATACAAC+GGG | + | chr2_3:3611055-3611074 | None:intergenic | 35.0% | |
| CTGGGCTAAAATCAATACAA+CGG | + | chr2_3:3611056-3611075 | None:intergenic | 35.0% | |
| AAAAGGGAGGAAGTTGTGAA+AGG | - | chr2_3:3609527-3609546 | Msa0272070:CDS | 40.0% | |
| GGAAGTTGTGAAAGGAAATG+AGG | - | chr2_3:3609535-3609554 | Msa0272070:CDS | 40.0% | |
| AAATGAGGTTGAAGATGGGA+AGG | - | chr2_3:3609550-3609569 | Msa0272070:CDS | 40.0% | |
| GGAGTTTGATGTTGATACTG+AGG | - | chr2_3:3609571-3609590 | Msa0272070:CDS | 40.0% | |
| ACGAAAAAGAGGAAGCTAGA+TGG | - | chr2_3:3609596-3609615 | Msa0272070:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | - | chr2_3:3609601-3609620 | Msa0272070:CDS | 40.0% | |
| AGATGGAAAGGAAGAACAGT+TGG | - | chr2_3:3609613-3609632 | Msa0272070:CDS | 40.0% | |
| AAAGGAAGAACAGTTGGCAA+AGG | - | chr2_3:3609619-3609638 | Msa0272070:CDS | 40.0% | |
| CTCTATTCACCTCCTGAATT+TGG | - | chr2_3:3609689-3609708 | Msa0272070:CDS | 40.0% | |
| TTCACCTCCTGAATTTGGAA+AGG | - | chr2_3:3609694-3609713 | Msa0272070:CDS | 40.0% | |
| TCACCTCCTGAATTTGGAAA+GGG | - | chr2_3:3609695-3609714 | Msa0272070:CDS | 40.0% | |
| CATCTTCTTGGTAAACAGTG+AGG | + | chr2_3:3609799-3609818 | None:intergenic | 40.0% | |
| TTTGAAAAGAAAGCCGGTGT+GGG | - | chr2_3:3609853-3609872 | Msa0272070:CDS | 40.0% | |
| GAGGATGAGGATTTGATATC+TGG | - | chr2_3:3609947-3609966 | Msa0272070:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | - | chr2_3:3609972-3609991 | Msa0272070:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | - | chr2_3:3610040-3610059 | Msa0272070:CDS | 40.0% | |
| TCTCAGAACAAATGAAGACC+TGG | - | chr2_3:3610138-3610157 | Msa0272070:CDS | 40.0% | |
| AGTAGCTCAAAATTGTTGCC+AGG | - | chr2_3:3610169-3610188 | Msa0272070:CDS | 40.0% | |
| TTCGAGTATTCAAGATGTCC+TGG | + | chr2_3:3610190-3610209 | None:intergenic | 40.0% | |
| GAATTAATGGGACCATTAGC+GGG | + | chr2_3:3610238-3610257 | None:intergenic | 40.0% | |
| TCAGTTCAGTTCCATCGAAA+TGG | - | chr2_3:3610256-3610275 | Msa0272070:CDS | 40.0% | |
| ATTATCACATGAGACCCATC+GGG | + | chr2_3:3610406-3610425 | None:intergenic | 40.0% | |
| GGGTCTCATGTGATAATATC+AGG | - | chr2_3:3610409-3610428 | Msa0272070:CDS | 40.0% | |
| ! | ATAGCTTTTGTGGGCAATGA+AGG | - | chr2_3:3610553-3610572 | Msa0272070:CDS | 40.0% |
| ! | GTTGGTACTCTGAAGATGAA+CGG | - | chr2_3:3610613-3610632 | Msa0272070:CDS | 40.0% |
| GGACAAAAATTGTTAAGCGC+TGG | - | chr2_3:3610667-3610686 | Msa0272070:CDS | 40.0% | |
| !! | CAAAAATTGTTAAGCGCTGG+TGG | - | chr2_3:3610670-3610689 | Msa0272070:CDS | 40.0% |
| CTCTTTGTACTTCTCCAGTA+GGG | - | chr2_3:3610776-3610795 | Msa0272070:CDS | 40.0% | |
| ACAATAGCGAGGAATTTCTC+GGG | - | chr2_3:3610842-3610861 | Msa0272070:CDS | 40.0% | |
| CCAGTTAGAGAAAACAGTGT+AGG | + | chr2_3:3611004-3611023 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | - | chr2_3:3611001-3611020 | Msa0272070:CDS | 40.0% |
| GGGCTAAAATCAATACAACG+GGG | + | chr2_3:3611054-3611073 | None:intergenic | 40.0% | |
| !!! | CGTTGTATTGATTTTAGCCC+AGG | - | chr2_3:3611054-3611073 | Msa0272070:CDS | 40.0% |
| !!! | TGTATTGATTTTAGCCCAGG+TGG | - | chr2_3:3611057-3611076 | Msa0272070:CDS | 40.0% |
| AAAAGGGAGGAAGTTGTGAA+AGG | - | chr2_3:3609527-3609546 | Msa0272070:CDS | 40.0% | |
| GGAAGTTGTGAAAGGAAATG+AGG | - | chr2_3:3609535-3609554 | Msa0272070:CDS | 40.0% | |
| AAATGAGGTTGAAGATGGGA+AGG | - | chr2_3:3609550-3609569 | Msa0272070:CDS | 40.0% | |
| GGAGTTTGATGTTGATACTG+AGG | - | chr2_3:3609571-3609590 | Msa0272070:CDS | 40.0% | |
| ACGAAAAAGAGGAAGCTAGA+TGG | - | chr2_3:3609596-3609615 | Msa0272070:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | - | chr2_3:3609601-3609620 | Msa0272070:CDS | 40.0% | |
| AGATGGAAAGGAAGAACAGT+TGG | - | chr2_3:3609613-3609632 | Msa0272070:CDS | 40.0% | |
| AAAGGAAGAACAGTTGGCAA+AGG | - | chr2_3:3609619-3609638 | Msa0272070:CDS | 40.0% | |
| CTCTATTCACCTCCTGAATT+TGG | - | chr2_3:3609689-3609708 | Msa0272070:CDS | 40.0% | |
| TTCACCTCCTGAATTTGGAA+AGG | - | chr2_3:3609694-3609713 | Msa0272070:CDS | 40.0% | |
| TCACCTCCTGAATTTGGAAA+GGG | - | chr2_3:3609695-3609714 | Msa0272070:CDS | 40.0% | |
| CATCTTCTTGGTAAACAGTG+AGG | + | chr2_3:3609799-3609818 | None:intergenic | 40.0% | |
| TTTGAAAAGAAAGCCGGTGT+GGG | - | chr2_3:3609853-3609872 | Msa0272070:CDS | 40.0% | |
| GAGGATGAGGATTTGATATC+TGG | - | chr2_3:3609947-3609966 | Msa0272070:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | - | chr2_3:3609972-3609991 | Msa0272070:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | - | chr2_3:3610040-3610059 | Msa0272070:CDS | 40.0% | |
| TCTCAGAACAAATGAAGACC+TGG | - | chr2_3:3610138-3610157 | Msa0272070:CDS | 40.0% | |
| AGTAGCTCAAAATTGTTGCC+AGG | - | chr2_3:3610169-3610188 | Msa0272070:CDS | 40.0% | |
| TTCGAGTATTCAAGATGTCC+TGG | + | chr2_3:3610190-3610209 | None:intergenic | 40.0% | |
| GAATTAATGGGACCATTAGC+GGG | + | chr2_3:3610238-3610257 | None:intergenic | 40.0% | |
| TCAGTTCAGTTCCATCGAAA+TGG | - | chr2_3:3610256-3610275 | Msa0272070:CDS | 40.0% | |
| ATTATCACATGAGACCCATC+GGG | + | chr2_3:3610406-3610425 | None:intergenic | 40.0% | |
| GGGTCTCATGTGATAATATC+AGG | - | chr2_3:3610409-3610428 | Msa0272070:CDS | 40.0% | |
| ! | ATAGCTTTTGTGGGCAATGA+AGG | - | chr2_3:3610553-3610572 | Msa0272070:CDS | 40.0% |
| ! | GTTGGTACTCTGAAGATGAA+CGG | - | chr2_3:3610613-3610632 | Msa0272070:CDS | 40.0% |
| GGACAAAAATTGTTAAGCGC+TGG | - | chr2_3:3610667-3610686 | Msa0272070:CDS | 40.0% | |
| !! | CAAAAATTGTTAAGCGCTGG+TGG | - | chr2_3:3610670-3610689 | Msa0272070:CDS | 40.0% |
| CTCTTTGTACTTCTCCAGTA+GGG | - | chr2_3:3610776-3610795 | Msa0272070:CDS | 40.0% | |
| ACAATAGCGAGGAATTTCTC+GGG | - | chr2_3:3610842-3610861 | Msa0272070:CDS | 40.0% | |
| CCAGTTAGAGAAAACAGTGT+AGG | + | chr2_3:3611004-3611023 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | - | chr2_3:3611001-3611020 | Msa0272070:CDS | 40.0% |
| GGGCTAAAATCAATACAACG+GGG | + | chr2_3:3611054-3611073 | None:intergenic | 40.0% | |
| !!! | CGTTGTATTGATTTTAGCCC+AGG | - | chr2_3:3611054-3611073 | Msa0272070:CDS | 40.0% |
| !!! | TGTATTGATTTTAGCCCAGG+TGG | - | chr2_3:3611057-3611076 | Msa0272070:CDS | 40.0% |
| CACCTCCTGAATTTGGAAAG+GGG | - | chr2_3:3609696-3609715 | Msa0272070:CDS | 45.0% | |
| ACCTCCTGAATTTGGAAAGG+GGG | - | chr2_3:3609697-3609716 | Msa0272070:CDS | 45.0% | |
| TCATCCCCCTTTCCAAATTC+AGG | + | chr2_3:3609704-3609723 | None:intergenic | 45.0% | |
| TGAGGAGACTATCTGCAGAA+CGG | + | chr2_3:3609781-3609800 | None:intergenic | 45.0% | |
| CTGAGAAGTCAGCATCTTCT+TGG | + | chr2_3:3609811-3609830 | None:intergenic | 45.0% | |
| ! | CTTTGAAAAGAAAGCCGGTG+TGG | - | chr2_3:3609852-3609871 | Msa0272070:CDS | 45.0% |
| GGTGGATGAGGAAGAAGAAA+AGG | - | chr2_3:3609874-3609893 | Msa0272070:CDS | 45.0% | |
| AAGGAAGTTAAGGAAGGAGG+AGG | - | chr2_3:3609928-3609947 | Msa0272070:CDS | 45.0% | |
| GCTGGATTCAGGGTCAAAAA+TGG | - | chr2_3:3610036-3610055 | Msa0272070:CDS | 45.0% | |
| TTGAGCTACTCTTCACAACC+AGG | + | chr2_3:3610159-3610178 | None:intergenic | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | - | chr2_3:3610287-3610306 | Msa0272070:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | + | chr2_3:3610369-3610388 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | - | chr2_3:3610388-3610407 | Msa0272070:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | - | chr2_3:3610389-3610408 | Msa0272070:CDS | 45.0% | |
| ! | TGATAAGATTGGTCCGCTGT+TGG | - | chr2_3:3610477-3610496 | Msa0272070:CDS | 45.0% |
| ! | GATAAGATTGGTCCGCTGTT+GGG | - | chr2_3:3610478-3610497 | Msa0272070:CDS | 45.0% |
| ACCATTGGGATCTGAGAACA+AGG | - | chr2_3:3610707-3610726 | Msa0272070:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | + | chr2_3:3610711-3610730 | None:intergenic | 45.0% | |
| GCTCTTTGTACTTCTCCAGT+AGG | - | chr2_3:3610775-3610794 | Msa0272070:CDS | 45.0% | |
| CAATAGCGAGGAATTTCTCG+GGG | - | chr2_3:3610843-3610862 | Msa0272070:CDS | 45.0% | |
| AATAGCGAGGAATTTCTCGG+GGG | - | chr2_3:3610844-3610863 | Msa0272070:CDS | 45.0% | |
| CAATACAACGGGGATAATGC+AGG | + | chr2_3:3611044-3611063 | None:intergenic | 45.0% | |
| !! | ATTGATTTTAGCCCAGGTGG+TGG | - | chr2_3:3611060-3611079 | Msa0272070:CDS | 45.0% |
| ATGGCTGTAGGAAATGCTTC+AGG | - | chr2_3:3611087-3611106 | Msa0272070:CDS | 45.0% | |
| CACCTCCTGAATTTGGAAAG+GGG | - | chr2_3:3609696-3609715 | Msa0272070:CDS | 45.0% | |
| ACCTCCTGAATTTGGAAAGG+GGG | - | chr2_3:3609697-3609716 | Msa0272070:CDS | 45.0% | |
| TCATCCCCCTTTCCAAATTC+AGG | + | chr2_3:3609704-3609723 | None:intergenic | 45.0% | |
| TGAGGAGACTATCTGCAGAA+CGG | + | chr2_3:3609781-3609800 | None:intergenic | 45.0% | |
| CTGAGAAGTCAGCATCTTCT+TGG | + | chr2_3:3609811-3609830 | None:intergenic | 45.0% | |
| ! | CTTTGAAAAGAAAGCCGGTG+TGG | - | chr2_3:3609852-3609871 | Msa0272070:CDS | 45.0% |
| GGTGGATGAGGAAGAAGAAA+AGG | - | chr2_3:3609874-3609893 | Msa0272070:CDS | 45.0% | |
| AAGGAAGTTAAGGAAGGAGG+AGG | - | chr2_3:3609928-3609947 | Msa0272070:CDS | 45.0% | |
| GCTGGATTCAGGGTCAAAAA+TGG | - | chr2_3:3610036-3610055 | Msa0272070:CDS | 45.0% | |
| TTGAGCTACTCTTCACAACC+AGG | + | chr2_3:3610159-3610178 | None:intergenic | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | - | chr2_3:3610287-3610306 | Msa0272070:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | + | chr2_3:3610369-3610388 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | - | chr2_3:3610388-3610407 | Msa0272070:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | - | chr2_3:3610389-3610408 | Msa0272070:CDS | 45.0% | |
| ! | TGATAAGATTGGTCCGCTGT+TGG | - | chr2_3:3610477-3610496 | Msa0272070:CDS | 45.0% |
| ! | GATAAGATTGGTCCGCTGTT+GGG | - | chr2_3:3610478-3610497 | Msa0272070:CDS | 45.0% |
| ACCATTGGGATCTGAGAACA+AGG | - | chr2_3:3610707-3610726 | Msa0272070:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | + | chr2_3:3610711-3610730 | None:intergenic | 45.0% | |
| GCTCTTTGTACTTCTCCAGT+AGG | - | chr2_3:3610775-3610794 | Msa0272070:CDS | 45.0% | |
| CAATAGCGAGGAATTTCTCG+GGG | - | chr2_3:3610843-3610862 | Msa0272070:CDS | 45.0% | |
| AATAGCGAGGAATTTCTCGG+GGG | - | chr2_3:3610844-3610863 | Msa0272070:CDS | 45.0% | |
| CAATACAACGGGGATAATGC+AGG | + | chr2_3:3611044-3611063 | None:intergenic | 45.0% | |
| !! | ATTGATTTTAGCCCAGGTGG+TGG | - | chr2_3:3611060-3611079 | Msa0272070:CDS | 45.0% |
| ATGGCTGTAGGAAATGCTTC+AGG | - | chr2_3:3611087-3611106 | Msa0272070:CDS | 45.0% | |
| TCCCCCTTTCCAAATTCAGG+AGG | + | chr2_3:3609701-3609720 | None:intergenic | 50.0% | |
| ! | TGGAAAGGGGGATGATGATG+AGG | - | chr2_3:3609709-3609728 | Msa0272070:CDS | 50.0% |
| ! | AAAGGGGGATGATGATGAGG+TGG | - | chr2_3:3609712-3609731 | Msa0272070:CDS | 50.0% |
| GTTAAGGAAGGAGGAGGATG+AGG | - | chr2_3:3609934-3609953 | Msa0272070:CDS | 50.0% | |
| AATAAAGCTGCTGTGAGCCG+AGG | - | chr2_3:3610094-3610113 | Msa0272070:CDS | 50.0% | |
| CATCCAGATCCTCGTAACCT+CGG | + | chr2_3:3610114-3610133 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | + | chr2_3:3610270-3610289 | None:intergenic | 50.0% | |
| TTCTCTTCCCTACCCAACAG+CGG | + | chr2_3:3610493-3610512 | None:intergenic | 50.0% | |
| !! | TTGTTAAGCGCTGGTGGTGA+TGG | - | chr2_3:3610676-3610695 | Msa0272070:CDS | 50.0% |
| GCTGCAAAATGTGTCCCTAC+TGG | + | chr2_3:3610793-3610812 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | - | chr2_3:3610793-3610812 | Msa0272070:CDS | 50.0% |
| ! | TTTGCAGCTGGTTCAGCTAG+TGG | - | chr2_3:3610805-3610824 | Msa0272070:CDS | 50.0% |
| !! | TAGCCCAGGTGGTGGTTTTA+TGG | - | chr2_3:3611068-3611087 | Msa0272070:CDS | 50.0% |
| CAGCCATAAAACCACCACCT+GGG | + | chr2_3:3611074-3611093 | None:intergenic | 50.0% | |
| ACAGCCATAAAACCACCACC+TGG | + | chr2_3:3611075-3611094 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | - | chr2_3:3611075-3611094 | Msa0272070:CDS | 50.0% |
| TCCCCCTTTCCAAATTCAGG+AGG | + | chr2_3:3609701-3609720 | None:intergenic | 50.0% | |
| ! | TGGAAAGGGGGATGATGATG+AGG | - | chr2_3:3609709-3609728 | Msa0272070:CDS | 50.0% |
| ! | AAAGGGGGATGATGATGAGG+TGG | - | chr2_3:3609712-3609731 | Msa0272070:CDS | 50.0% |
| GTTAAGGAAGGAGGAGGATG+AGG | - | chr2_3:3609934-3609953 | Msa0272070:CDS | 50.0% | |
| AATAAAGCTGCTGTGAGCCG+AGG | - | chr2_3:3610094-3610113 | Msa0272070:CDS | 50.0% | |
| CATCCAGATCCTCGTAACCT+CGG | + | chr2_3:3610114-3610133 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | + | chr2_3:3610270-3610289 | None:intergenic | 50.0% | |
| TTCTCTTCCCTACCCAACAG+CGG | + | chr2_3:3610493-3610512 | None:intergenic | 50.0% | |
| !! | TTGTTAAGCGCTGGTGGTGA+TGG | - | chr2_3:3610676-3610695 | Msa0272070:CDS | 50.0% |
| GCTGCAAAATGTGTCCCTAC+TGG | + | chr2_3:3610793-3610812 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | - | chr2_3:3610793-3610812 | Msa0272070:CDS | 50.0% |
| ! | TTTGCAGCTGGTTCAGCTAG+TGG | - | chr2_3:3610805-3610824 | Msa0272070:CDS | 50.0% |
| !! | TAGCCCAGGTGGTGGTTTTA+TGG | - | chr2_3:3611068-3611087 | Msa0272070:CDS | 50.0% |
| CAGCCATAAAACCACCACCT+GGG | + | chr2_3:3611074-3611093 | None:intergenic | 50.0% | |
| ACAGCCATAAAACCACCACC+TGG | + | chr2_3:3611075-3611094 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | - | chr2_3:3611075-3611094 | Msa0272070:CDS | 50.0% |
| ! | TGATGATGAGGTGGATGCCG+CGG | - | chr2_3:3609721-3609740 | Msa0272070:CDS | 55.0% |
| AGAAGCCTTTGCAGAAGCCG+CGG | + | chr2_3:3609741-3609760 | None:intergenic | 55.0% | |
| GAAAAGAAAGCCGGTGTGGG+TGG | - | chr2_3:3609856-3609875 | Msa0272070:CDS | 55.0% | |
| TCTTCCTCATCCACCCACAC+CGG | + | chr2_3:3609869-3609888 | None:intergenic | 55.0% | |
| CAGCATGCAAAGCTCAACCG+AGG | - | chr2_3:3609998-3610017 | Msa0272070:CDS | 55.0% | |
| AGCTCAACCGAGGAACTGAC+TGG | - | chr2_3:3610008-3610027 | Msa0272070:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | - | chr2_3:3610009-3610028 | Msa0272070:CDS | 55.0% | |
| ! | AGATTGGTCCGCTGTTGGGT+AGG | - | chr2_3:3610482-3610501 | Msa0272070:CDS | 55.0% |
| ! | GATTGGTCCGCTGTTGGGTA+GGG | - | chr2_3:3610483-3610502 | Msa0272070:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | + | chr2_3:3611027-3611046 | None:intergenic | 55.0% | |
| ! | TGATGATGAGGTGGATGCCG+CGG | - | chr2_3:3609721-3609740 | Msa0272070:CDS | 55.0% |
| AGAAGCCTTTGCAGAAGCCG+CGG | + | chr2_3:3609741-3609760 | None:intergenic | 55.0% | |
| GAAAAGAAAGCCGGTGTGGG+TGG | - | chr2_3:3609856-3609875 | Msa0272070:CDS | 55.0% | |
| TCTTCCTCATCCACCCACAC+CGG | + | chr2_3:3609869-3609888 | None:intergenic | 55.0% | |
| CAGCATGCAAAGCTCAACCG+AGG | - | chr2_3:3609998-3610017 | Msa0272070:CDS | 55.0% | |
| AGCTCAACCGAGGAACTGAC+TGG | - | chr2_3:3610008-3610027 | Msa0272070:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | - | chr2_3:3610009-3610028 | Msa0272070:CDS | 55.0% | |
| ! | AGATTGGTCCGCTGTTGGGT+AGG | - | chr2_3:3610482-3610501 | Msa0272070:CDS | 55.0% |
| ! | GATTGGTCCGCTGTTGGGTA+GGG | - | chr2_3:3610483-3610502 | Msa0272070:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | + | chr2_3:3611027-3611046 | None:intergenic | 55.0% | |
| AAAGCCGGTGTGGGTGGATG+AGG | - | chr2_3:3609862-3609881 | Msa0272070:CDS | 60.0% | |
| ACTGGGCGCAGCTGGATTCA+GGG | - | chr2_3:3610026-3610045 | Msa0272070:CDS | 60.0% | |
| TGCTGTGAGCCGAGGTTACG+AGG | - | chr2_3:3610102-3610121 | Msa0272070:CDS | 60.0% | |
| GAGCCGAGGTTACGAGGATC+TGG | - | chr2_3:3610108-3610127 | Msa0272070:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | - | chr2_3:3610277-3610296 | Msa0272070:CDS | 60.0% | |
| AAAGCCGGTGTGGGTGGATG+AGG | - | chr2_3:3609862-3609881 | Msa0272070:CDS | 60.0% | |
| ACTGGGCGCAGCTGGATTCA+GGG | - | chr2_3:3610026-3610045 | Msa0272070:CDS | 60.0% | |
| TGCTGTGAGCCGAGGTTACG+AGG | - | chr2_3:3610102-3610121 | Msa0272070:CDS | 60.0% | |
| GAGCCGAGGTTACGAGGATC+TGG | - | chr2_3:3610108-3610127 | Msa0272070:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | - | chr2_3:3610277-3610296 | Msa0272070:CDS | 60.0% | |
| GGATGCCGCGGCTTCTGCAA+AGG | - | chr2_3:3609733-3609752 | Msa0272070:CDS | 65.0% | |
| GCTGCGCCCAGTCAGTTCCT+CGG | + | chr2_3:3610018-3610037 | None:intergenic | 65.0% | |
| AGGAACTGACTGGGCGCAGC+TGG | - | chr2_3:3610018-3610037 | Msa0272070:CDS | 65.0% | |
| GACTGGGCGCAGCTGGATTC+AGG | - | chr2_3:3610025-3610044 | Msa0272070:CDS | 65.0% | |
| GGATGCCGCGGCTTCTGCAA+AGG | - | chr2_3:3609733-3609752 | Msa0272070:CDS | 65.0% | |
| GCTGCGCCCAGTCAGTTCCT+CGG | + | chr2_3:3610018-3610037 | None:intergenic | 65.0% | |
| AGGAACTGACTGGGCGCAGC+TGG | - | chr2_3:3610018-3610037 | Msa0272070:CDS | 65.0% | |
| GACTGGGCGCAGCTGGATTC+AGG | - | chr2_3:3610025-3610044 | Msa0272070:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 3609485 | 3611152 | 3609485 | ID=Msa0272070;Name=Msa0272070 |
| chr2_3 | mRNA | 3609485 | 3611152 | 3609485 | ID=Msa0272070-mRNA-1;Parent=Msa0272070;Name=Msa0272070-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|555 |
| chr2_3 | exon | 3609485 | 3611152 | 3609485 | ID=Msa0272070-mRNA-1:exon:1819;Parent=Msa0272070-mRNA-1 |
| chr2_3 | CDS | 3609485 | 3611152 | 3609485 | ID=Msa0272070-mRNA-1:cds;Parent=Msa0272070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
