Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248370 | XP_013462721.1 | 97.555 | 409 | 10 | 0 | 1 | 409 | 1 | 409 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248370 | sp|A7S4N4|SERIC_NEMVE | 32.960 | 446 | 251 | 16 | 3 | 409 | 20 | 456 | 4.18e-59 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248370 | B7FII2 | 97.555 | 409 | 10 | 0 | 1 | 409 | 1 | 409 | 0.0 | 811 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006650 | Msa0248370 | 0.825296 | 5.065463e-54 | -8.615850e-47 |
| Msa0101120 | Msa0248370 | 0.800929 | 1.144376e-48 | -8.615850e-47 |
| Msa0248370 | Msa1346080 | 0.821559 | 3.786167e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248370 | MtrunA17_Chr2g0287641 | 97.555 | 409 | 10 | 0 | 1 | 409 | 1 | 409 | 0.0 | 811 |
| Msa0248370 | MtrunA17_Chr7g0237091 | 63.021 | 384 | 135 | 5 | 28 | 408 | 31 | 410 | 8.45e-172 | 486 |
| Msa0248370 | MtrunA17_Chr8g0390691 | 31.332 | 383 | 237 | 7 | 28 | 407 | 34 | 393 | 2.03e-60 | 201 |
| Msa0248370 | MtrunA17_Chr6g0485111 | 31.127 | 408 | 243 | 10 | 13 | 407 | 16 | 398 | 1.13e-59 | 199 |
| Msa0248370 | MtrunA17_Chr1g0169271 | 30.570 | 386 | 241 | 8 | 26 | 406 | 47 | 410 | 2.08e-54 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248370 | AT3G06170.1 | 77.017 | 409 | 92 | 2 | 1 | 408 | 1 | 408 | 0.0 | 641 |
| Msa0248370 | AT1G16180.2 | 63.452 | 394 | 139 | 4 | 18 | 408 | 21 | 412 | 1.61e-171 | 486 |
| Msa0248370 | AT1G16180.1 | 63.452 | 394 | 139 | 4 | 18 | 408 | 21 | 412 | 1.61e-171 | 486 |
| Msa0248370 | AT3G24460.2 | 32.134 | 389 | 244 | 7 | 21 | 407 | 33 | 403 | 4.17e-63 | 208 |
| Msa0248370 | AT3G24460.1 | 32.134 | 389 | 244 | 7 | 21 | 407 | 33 | 403 | 4.17e-63 | 208 |
| Msa0248370 | AT2G33205.8 | 31.152 | 382 | 240 | 6 | 28 | 406 | 49 | 410 | 7.63e-59 | 198 |
| Msa0248370 | AT2G33205.5 | 31.152 | 382 | 240 | 6 | 28 | 406 | 49 | 410 | 7.63e-59 | 198 |
| Msa0248370 | AT2G33205.1 | 31.070 | 383 | 237 | 7 | 28 | 406 | 49 | 408 | 1.78e-58 | 197 |
| Msa0248370 | AT4G13345.1 | 31.548 | 336 | 207 | 5 | 74 | 407 | 78 | 392 | 4.41e-57 | 192 |
| Msa0248370 | AT4G13345.2 | 30.952 | 336 | 209 | 5 | 74 | 407 | 78 | 392 | 4.91e-56 | 189 |
| Msa0248370 | AT4G13345.6 | 30.952 | 336 | 209 | 5 | 74 | 407 | 78 | 392 | 4.91e-56 | 189 |
| Msa0248370 | AT2G33205.9 | 30.623 | 369 | 233 | 6 | 28 | 393 | 49 | 397 | 1.09e-53 | 184 |
| Msa0248370 | AT2G33205.2 | 31.722 | 331 | 203 | 6 | 79 | 406 | 5 | 315 | 5.69e-52 | 177 |
| Msa0248370 | AT4G13345.4 | 31.366 | 322 | 198 | 5 | 74 | 393 | 78 | 378 | 1.57e-51 | 178 |
| Msa0248370 | AT2G33205.7 | 32.362 | 309 | 186 | 6 | 101 | 406 | 12 | 300 | 1.23e-50 | 173 |
| Msa0248370 | AT2G33205.6 | 28.698 | 338 | 219 | 5 | 28 | 363 | 49 | 366 | 5.04e-44 | 157 |
| Msa0248370 | AT4G13345.5 | 28.522 | 291 | 186 | 4 | 74 | 363 | 78 | 347 | 9.28e-41 | 148 |
| Msa0248370 | AT2G33205.3 | 28.205 | 273 | 192 | 4 | 28 | 298 | 49 | 319 | 2.02e-34 | 130 |
| Msa0248370 | AT2G33205.4 | 28.205 | 273 | 192 | 4 | 28 | 298 | 49 | 319 | 2.02e-34 | 130 |
| Msa0248370 | AT4G13345.3 | 32.990 | 194 | 128 | 2 | 74 | 266 | 78 | 270 | 1.53e-32 | 125 |
| Msa0248370 | AT4G13345.7 | 32.990 | 194 | 128 | 2 | 74 | 266 | 78 | 270 | 1.53e-32 | 125 |
Find 119 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCAGCCATGCTTCTTTC+TGG | 0.128877 | 2_2:+32286605 | Msa0248370:CDS |
| TTTAAGAGGGTGCAATTTAA+TGG | 0.209606 | 2_2:+32286945 | Msa0248370:three_prime_UTR |
| CCAGTGAGTGCTGGTGTTTA+AGG | 0.224404 | 2_2:+32287171 | Msa0248370:three_prime_UTR |
| GTGCGTCTCTTATAGTTTCT+TGG | 0.240519 | 2_2:+32282594 | Msa0248370:CDS |
| GTAAGCATTATGTACAATAA+TGG | 0.279631 | 2_2:-32287133 | None:intergenic |
| TGCAATTTAATGGACAAAAT+TGG | 0.290339 | 2_2:+32286955 | Msa0248370:three_prime_UTR |
| ATGTATCACGCCTATCATTT+TGG | 0.291291 | 2_2:-32283584 | None:intergenic |
| AGAAGTTGGAGCACCCCTTT+TGG | 0.315618 | 2_2:+32282625 | Msa0248370:CDS |
| ATGTTGGTTGGACATCAGTA+TGG | 0.324260 | 2_2:+32286663 | Msa0248370:CDS |
| CATACCATACGCTAGCATTA+TGG | 0.326992 | 2_2:-32283682 | None:intergenic |
| TAGGATTCATATCGAAGTTT+GGG | 0.329009 | 2_2:+32283780 | Msa0248370:intron |
| GCTCTACTTGTTATATCAAT+TGG | 0.330521 | 2_2:+32283980 | Msa0248370:CDS |
| GTAGGATTCATATCGAAGTT+TGG | 0.336621 | 2_2:+32283779 | Msa0248370:intron |
| AAGTTCAAGAGCAAAATTAA+TGG | 0.340498 | 2_2:-32286823 | None:intergenic |
| AATGTTTGTGTTGTGATAAA+TGG | 0.341158 | 2_2:+32287063 | Msa0248370:three_prime_UTR |
| TAAGCATTATGTACAATAAT+GGG | 0.344969 | 2_2:-32287132 | None:intergenic |
| GGAAGAAGGAAAAGGCAAAA+AGG | 0.345273 | 2_2:+32286511 | Msa0248370:CDS |
| TGCTAGCGAGGGCAAATATT+AGG | 0.356747 | 2_2:-32286580 | None:intergenic |
| CTCTGTTCCTCTGTAGCATC+TGG | 0.364520 | 2_2:+32282527 | Msa0248370:CDS |
| TACGCTAGCATTATGGAATC+TGG | 0.370977 | 2_2:-32283675 | None:intergenic |
| CACATTAGGGATTAATAGAA+TGG | 0.377573 | 2_2:+32286910 | Msa0248370:three_prime_UTR |
| TACTCGACTGTACCCACAAT+TGG | 0.381293 | 2_2:+32283837 | Msa0248370:CDS |
| CTAGTACTATTACCTGCTTT+AGG | 0.399032 | 2_2:-32286294 | None:intergenic |
| AGCACCGGTACGCTCGTTCT+TGG | 0.406430 | 2_2:+32286189 | Msa0248370:CDS |
| CCTTCACACCGATCATTATG+AGG | 0.407217 | 2_2:-32283560 | None:intergenic |
| GCCGTTCTTCGCGTGAGCTT+GGG | 0.408329 | 2_2:+32283510 | Msa0248370:CDS |
| TTGTATTCTGCTCTTCGTGC+TGG | 0.417988 | 2_2:+32286237 | Msa0248370:CDS |
| AACTAAGCAAATTCGCGATC+AGG | 0.419335 | 2_2:-32286755 | None:intergenic |
| AGCCGTTCTTCGCGTGAGCT+TGG | 0.419506 | 2_2:+32283509 | Msa0248370:CDS |
| CCCTAATGTGACAAAAGATC+AGG | 0.422999 | 2_2:-32286897 | None:intergenic |
| TCTTGGATTCTCAGAGAAGT+TGG | 0.423831 | 2_2:+32282611 | Msa0248370:CDS |
| GTTGGACATCAGTATGGGTT+CGG | 0.425250 | 2_2:+32286669 | Msa0248370:CDS |
| CAGCCATGCTTCTTTCTGGA+TGG | 0.429458 | 2_2:+32286609 | Msa0248370:CDS |
| TAGCAAGACCATTGAGTGTA+TGG | 0.433736 | 2_2:+32287005 | Msa0248370:three_prime_UTR |
| GGCACAGAATGGGTTACTGC+TGG | 0.436632 | 2_2:+32286695 | Msa0248370:CDS |
| GTTGTATCTGTGGAGTCTCT+TGG | 0.437802 | 2_2:+32286718 | Msa0248370:CDS |
| AATGAATAGGAATAGCTAAC+TGG | 0.439268 | 2_2:-32286551 | None:intergenic |
| ATCTGAGCTTTCAGATGTGC+TGG | 0.450473 | 2_2:-32286633 | None:intergenic |
| GGATATGAAATACATTTAAG+AGG | 0.452111 | 2_2:+32286931 | Msa0248370:three_prime_UTR |
| GGACTGTAAAGTCAGTGATA+TGG | 0.453462 | 2_2:+32283622 | Msa0248370:CDS |
| TTGATACCATTCCTTTGTGT+GGG | 0.464431 | 2_2:-32283481 | None:intergenic |
| ATTGCAGCATTTACGCTGTC+AGG | 0.472578 | 2_2:+32284010 | Msa0248370:CDS |
| TATTAGGTGGAAGAATGAAT+AGG | 0.473207 | 2_2:-32286564 | None:intergenic |
| CCTTAAACACCAGCACTCAC+TGG | 0.474192 | 2_2:-32287171 | None:intergenic |
| CAAACATTCTATACATAGGT+AGG | 0.482457 | 2_2:-32287048 | None:intergenic |
| CAGATATGATAGATGTTGGT+TGG | 0.482935 | 2_2:+32286651 | Msa0248370:CDS |
| CCCATGCATCATTCCAATTG+TGG | 0.483302 | 2_2:-32283850 | None:intergenic |
| TTCTCTTGTCTGAAAAGTAA+TGG | 0.489901 | 2_2:+32286776 | Msa0248370:three_prime_UTR |
| AACAGACAACATATCTATGT+AGG | 0.490020 | 2_2:-32287205 | None:intergenic |
| TTACCTGCTTTAGGTGAAGA+TGG | 0.492811 | 2_2:-32286285 | None:intergenic |
| AGTTGTTGCTCTACATCCTA+AGG | 0.498071 | 2_2:+32284126 | Msa0248370:CDS |
| GTGTGAAGGACCAAAATGAT+AGG | 0.498462 | 2_2:+32283574 | Msa0248370:CDS |
| TCTTCCACTTCTTCAAGAAG+AGG | 0.502485 | 2_2:-32286494 | None:intergenic |
| GGTTCGGATTGGCACAGAAT+GGG | 0.502709 | 2_2:+32286685 | Msa0248370:CDS |
| TAAAGTGATATCACAGATGC+AGG | 0.505430 | 2_2:-32286084 | None:intergenic |
| TTTCAATACCATACACTCAA+TGG | 0.507144 | 2_2:-32287013 | None:intergenic |
| CTTGATACCATTCCTTTGTG+TGG | 0.508843 | 2_2:-32283482 | None:intergenic |
| CCATGCATCATTCCAATTGT+GGG | 0.511035 | 2_2:-32283849 | None:intergenic |
| CAAACCTCTTCTTGAAGAAG+TGG | 0.512475 | 2_2:+32286490 | Msa0248370:CDS |
| GGGTTCGGATTGGCACAGAA+TGG | 0.517496 | 2_2:+32286684 | Msa0248370:CDS |
| GGGCTAAAACAACAAAGAAC+AGG | 0.518147 | 2_2:-32283539 | None:intergenic |
| CTTCTTGAAGAAGTGGAAGA+AGG | 0.518193 | 2_2:+32286497 | Msa0248370:CDS |
| CGTACCGGTGCTTACAGCTC+TGG | 0.518345 | 2_2:-32286178 | None:intergenic |
| TTCATATCGAAGTTTGGGGC+TGG | 0.530950 | 2_2:+32283785 | Msa0248370:CDS |
| TTACTGCTGGGTTGTATCTG+TGG | 0.537397 | 2_2:+32286708 | Msa0248370:CDS |
| CAAGAATCATCGACATGGAA+AGG | 0.545245 | 2_2:-32284090 | None:intergenic |
| TCCCAAGCTCACGCGAAGAA+CGG | 0.549025 | 2_2:-32283511 | None:intergenic |
| GAAGAAGTGGAAGAAGGAAA+AGG | 0.550592 | 2_2:+32286503 | Msa0248370:CDS |
| CTTAAACACCAGCACTCACT+GGG | 0.560792 | 2_2:-32287170 | None:intergenic |
| CTGTGCATATGTGTGTTACA+CGG | 0.564842 | 2_2:+32286107 | Msa0248370:CDS |
| ACATCAGTATGGGTTCGGAT+TGG | 0.567017 | 2_2:+32286674 | Msa0248370:CDS |
| ACTTGCAGGGATAGATTCAT+CGG | 0.567845 | 2_2:+32283455 | Msa0248370:intron |
| TGTTGGTTGGACATCAGTAT+GGG | 0.571374 | 2_2:+32286664 | Msa0248370:CDS |
| ACAGACAACATATCTATGTA+GGG | 0.573000 | 2_2:-32287204 | None:intergenic |
| AAAATGATAGGCGTGATACA+TGG | 0.575329 | 2_2:+32283586 | Msa0248370:CDS |
| ATTGCACTCCCAGTGAGTGC+TGG | 0.576630 | 2_2:+32287162 | Msa0248370:three_prime_UTR |
| CCTAATGTGACAAAAGATCA+GGG | 0.582344 | 2_2:-32286896 | None:intergenic |
| CATGCCAAGAACGAGCGTAC+CGG | 0.583517 | 2_2:-32286193 | None:intergenic |
| TTCGGAACAGAGTAAGAGAG+AGG | 0.588669 | 2_2:-32286850 | None:intergenic |
| GGCTGAATACATGCTAGCGA+GGG | 0.591827 | 2_2:-32286591 | None:intergenic |
| GATTCCATAATGCTAGCGTA+TGG | 0.593678 | 2_2:+32283678 | Msa0248370:CDS |
| TCAAATTCGACAGTGAAACA+AGG | 0.595013 | 2_2:+32282439 | Msa0248370:five_prime_UTR |
| CCCACAATTGGAATGATGCA+TGG | 0.597215 | 2_2:+32283849 | Msa0248370:CDS |
| AAACATTCTATACATAGGTA+GGG | 0.597542 | 2_2:-32287047 | None:intergenic |
| ATTCTATACATAGGTAGGGA+AGG | 0.597817 | 2_2:-32287043 | None:intergenic |
| AGAGATTCCAGATGCTACAG+AGG | 0.599480 | 2_2:-32282534 | None:intergenic |
| TCGGAACAGAGTAAGAGAGA+GGG | 0.600040 | 2_2:-32286849 | None:intergenic |
| GATATGAAATACATTTAAGA+GGG | 0.601271 | 2_2:+32286932 | Msa0248370:three_prime_UTR |
| TGGCTGAATACATGCTAGCG+AGG | 0.601902 | 2_2:-32286592 | None:intergenic |
| ATACATGGCACCATGGTGGA+TGG | 0.602093 | 2_2:+32283601 | Msa0248370:CDS |
| TTTATTTGGTTCAACCCTGG+GGG | 0.607174 | 2_2:+32284040 | Msa0248370:CDS |
| CCTCATAATGATCGGTGTGA+AGG | 0.607647 | 2_2:+32283560 | Msa0248370:CDS |
| CCACAATTGGAATGATGCAT+GGG | 0.607719 | 2_2:+32283850 | Msa0248370:CDS |
| CCACCATCTTCACCTAAAGC+AGG | 0.610630 | 2_2:+32286282 | Msa0248370:CDS |
| CGGATACCCACACAAAGGAA+TGG | 0.612647 | 2_2:+32283475 | Msa0248370:CDS |
| AACACAAACATTCTATACAT+AGG | 0.619087 | 2_2:-32287052 | None:intergenic |
| TGCTGCACATCTTTAACATG+TGG | 0.624992 | 2_2:+32282503 | Msa0248370:CDS |
| AGCTCAGATATGATAGATGT+TGG | 0.626002 | 2_2:+32286647 | Msa0248370:CDS |
| ACAACATATCTATGTAGGGA+AGG | 0.626304 | 2_2:-32287200 | None:intergenic |
| AATCTGGAATGAAGAATGCA+AGG | 0.631056 | 2_2:-32283659 | None:intergenic |
| GCATGATAAACAACACGACA+TGG | 0.631933 | 2_2:-32282483 | None:intergenic |
| AAGTCCAGAGCTGTAAGCAC+CGG | 0.637116 | 2_2:+32286174 | Msa0248370:CDS |
| GCACAGAATGGGTTACTGCT+GGG | 0.638801 | 2_2:+32286696 | Msa0248370:CDS |
| AGATGGTGGTGATAAGAATG+TGG | 0.644221 | 2_2:-32286268 | None:intergenic |
| TGTGCATATGTGTGTTACAC+GGG | 0.646582 | 2_2:+32286108 | Msa0248370:CDS |
| AGGATTCATATCGAAGTTTG+GGG | 0.647048 | 2_2:+32283781 | Msa0248370:intron |
| CTTCACACCGATCATTATGA+GGG | 0.650240 | 2_2:-32283559 | None:intergenic |
| AAAAGCAAGAATCATCGACA+TGG | 0.658360 | 2_2:-32284095 | None:intergenic |
| CCTCGAGGTTATGAGTGCAA+TGG | 0.658730 | 2_2:+32286144 | Msa0248370:CDS |
| TCGCGATCAGGAAACAACAA+AGG | 0.672382 | 2_2:-32286743 | None:intergenic |
| GGTCCATCCAGAAAGAAGCA+TGG | 0.675448 | 2_2:-32286612 | None:intergenic |
| TAGCGAGGGCAAATATTAGG+TGG | 0.692044 | 2_2:-32286577 | None:intergenic |
| ACTTTACAGTCCATCCACCA+TGG | 0.694999 | 2_2:-32283611 | None:intergenic |
| CGTGATACATGGCACCATGG+TGG | 0.700209 | 2_2:+32283597 | Msa0248370:CDS |
| TTCATCGGATACCCACACAA+AGG | 0.723258 | 2_2:+32283470 | Msa0248370:CDS |
| AGGCGTGATACATGGCACCA+TGG | 0.725656 | 2_2:+32283594 | Msa0248370:CDS |
| GGTCTTTCTAGTGAACCTCG+AGG | 0.738371 | 2_2:+32286129 | Msa0248370:CDS |
| CCATTGCACTCATAACCTCG+AGG | 0.750267 | 2_2:-32286144 | None:intergenic |
| CCTGCTTTAGGTGAAGATGG+TGG | 0.751455 | 2_2:-32286282 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAACTATATAAAGAATTT+TGG | - | chr2_2:32283903-32283922 | None:intergenic | 10.0% |
| !!! | AGTCTTAATTTTTATTTTTA+TGG | + | chr2_2:32285867-32285886 | Msa0248370:intron | 10.0% |
| !! | CAATTGTAAAATAAATTAAA+AGG | - | chr2_2:32286013-32286032 | None:intergenic | 10.0% |
| !!! | TTTTGTAGTAATTTTCATTT+GGG | + | chr2_2:32282692-32282711 | Msa0248370:intron | 15.0% |
| !!! | TTATATAGTTAATTTTCCTA+TGG | + | chr2_2:32283910-32283929 | Msa0248370:intron | 15.0% |
| !! | GCAATAATTAAATTTAATGA+TGG | - | chr2_2:32284742-32284761 | None:intergenic | 15.0% |
| !! | AAGTAATGTGAAAAATATAA+AGG | + | chr2_2:32284993-32285012 | Msa0248370:intron | 15.0% |
| !! | AGTAATGTGAAAAATATAAA+GGG | + | chr2_2:32284994-32285013 | Msa0248370:intron | 15.0% |
| !! | AATATATATTCCATACAAAA+TGG | + | chr2_2:32285050-32285069 | Msa0248370:intron | 15.0% |
| !!! | ATCTTATTGTTTGTTTTTAT+AGG | + | chr2_2:32285475-32285494 | Msa0248370:intron | 15.0% |
| !! | AATAAAAATTAAGACTCTTA+GGG | - | chr2_2:32285863-32285882 | None:intergenic | 15.0% |
| !! | AAATAAAAATTAAGACTCTT+AGG | - | chr2_2:32285864-32285883 | None:intergenic | 15.0% |
| !! | ATTGATCAAGATTAAAAATA+AGG | + | chr2_2:32285926-32285945 | Msa0248370:intron | 15.0% |
| !! | TTGTAAAATAAATTAAAAGG+AGG | - | chr2_2:32286010-32286029 | None:intergenic | 15.0% |
| !! | TAAAATCTTTAGCTAAAGAA+AGG | - | chr2_2:32282670-32282689 | None:intergenic | 20.0% |
| !!! | CTTTTGTAGTAATTTTCATT+TGG | + | chr2_2:32282691-32282710 | Msa0248370:intron | 20.0% |
| !! | ATTGGTTAAGTTTGATAAAT+TGG | + | chr2_2:32282729-32282748 | Msa0248370:intron | 20.0% |
| !! | TTGGTTAAGTTTGATAAATT+GGG | + | chr2_2:32282730-32282749 | Msa0248370:intron | 20.0% |
| !! | ATATTATATCCTATGAAGTA+CGG | - | chr2_2:32282924-32282943 | None:intergenic | 20.0% |
| !! | ATGATTATTTAGTGCTTATT+TGG | + | chr2_2:32283019-32283038 | Msa0248370:intron | 20.0% |
| !! | TATATAATATTGTCGAATTG+GGG | - | chr2_2:32283216-32283235 | None:intergenic | 20.0% |
| !! | GTATATAATATTGTCGAATT+GGG | - | chr2_2:32283217-32283236 | None:intergenic | 20.0% |
| !! | AGTATATAATATTGTCGAAT+TGG | - | chr2_2:32283218-32283237 | None:intergenic | 20.0% |
| !! | GTATCCAAAAACTTATATAT+TGG | - | chr2_2:32283316-32283335 | None:intergenic | 20.0% |
| !! | TATATAAATTCAAACTTGCA+GGG | + | chr2_2:32283442-32283461 | Msa0248370:intron | 20.0% |
| !! | ATGCAAATTTATTAGCATAA+AGG | - | chr2_2:32283947-32283966 | None:intergenic | 20.0% |
| !! | TATTATGATTAATTGCTGAT+AGG | - | chr2_2:32284630-32284649 | None:intergenic | 20.0% |
| !! | TATAAGGAATATACTTGTTT+AGG | - | chr2_2:32284804-32284823 | None:intergenic | 20.0% |
| !! | ATTAAGTTAAGATCAGTATA+AGG | - | chr2_2:32284820-32284839 | None:intergenic | 20.0% |
| !!! | TATTTTTCACATTACTTAGA+AGG | - | chr2_2:32284990-32285009 | None:intergenic | 20.0% |
| !! | GTAATGTGAAAAATATAAAG+GGG | + | chr2_2:32284995-32285014 | Msa0248370:intron | 20.0% |
| !! | TAATGTGAAAAATATAAAGG+GGG | + | chr2_2:32284996-32285015 | Msa0248370:intron | 20.0% |
| !! | ACTAATAAACAATTCTTAGA+AGG | - | chr2_2:32285903-32285922 | None:intergenic | 20.0% |
| !! | TGAAATTCAATATGTTTGAA+AGG | + | chr2_2:32285954-32285973 | Msa0248370:intron | 20.0% |
| !! | TAATAATATAGTGCAAAAAC+AGG | + | chr2_2:32286044-32286063 | Msa0248370:intron | 20.0% |
| !!! | TTTCTGGAATATGTTTATTT+AGG | + | chr2_2:32286461-32286480 | Msa0248370:intron | 20.0% |
| !!! | TTGTCATCTTCATTTATTTT+CGG | - | chr2_2:32286871-32286890 | None:intergenic | 20.0% |
| !! | GATATGAAATACATTTAAGA+GGG | + | chr2_2:32286932-32286951 | Msa0248370:three_prime_UTR | 20.0% |
| !! | TAAGCATTATGTACAATAAT+GGG | - | chr2_2:32287135-32287154 | None:intergenic | 20.0% |
| ! | TAGAGAAAAACTTGAAACTT+TGG | + | chr2_2:32282973-32282992 | Msa0248370:intron | 25.0% |
| !! | AGTGCCAATATATAAGTTTT+TGG | + | chr2_2:32283309-32283328 | Msa0248370:intron | 25.0% |
| !! | TGATTTTCTCTCTTTTCATT+TGG | + | chr2_2:32283419-32283438 | Msa0248370:intron | 25.0% |
| ! | GTATATAAATTCAAACTTGC+AGG | + | chr2_2:32283441-32283460 | Msa0248370:intron | 25.0% |
| ! | TTGAGAAAGATGAACAAAAA+TGG | + | chr2_2:32283873-32283892 | Msa0248370:CDS | 25.0% |
| ! | GCTAATAAATTTGCATGTTT+AGG | + | chr2_2:32283951-32283970 | Msa0248370:intron | 25.0% |
| !! | TGTCAGGAATTCTTTTTATT+TGG | + | chr2_2:32284026-32284045 | Msa0248370:CDS | 25.0% |
| !!! | TTTTTTTGTGCTTTGATATG+CGG | + | chr2_2:32284266-32284285 | Msa0248370:intron | 25.0% |
| ! | CCACAATCTACTATAATTAA+TGG | - | chr2_2:32284324-32284343 | None:intergenic | 25.0% |
| ! | CCATTAATTATAGTAGATTG+TGG | + | chr2_2:32284321-32284340 | Msa0248370:intron | 25.0% |
| !! | AAATATTGTTAAGGTTGGTT+AGG | - | chr2_2:32284475-32284494 | None:intergenic | 25.0% |
| ! | AACCAACCTTAACAATATTT+CGG | + | chr2_2:32284475-32284494 | Msa0248370:intron | 25.0% |
| ! | TTCATTCCGAAATATTGTTA+AGG | - | chr2_2:32284484-32284503 | None:intergenic | 25.0% |
| !!! | TTTATATTTTAACGGACGAT+TGG | + | chr2_2:32284665-32284684 | Msa0248370:intron | 25.0% |
| ! | AAATTGTTTCGATGTAAACA+CGG | + | chr2_2:32284889-32284908 | Msa0248370:intron | 25.0% |
| !!! | CCAACAAGTTCTAAATTAAT+GGG | - | chr2_2:32285400-32285419 | None:intergenic | 25.0% |
| !! | CCATTAATTTAGAACTTGTT+GGG | + | chr2_2:32285398-32285417 | Msa0248370:intron | 25.0% |
| ! | AAGTTCAATTGTTTAAGTCA+TGG | + | chr2_2:32285705-32285724 | Msa0248370:intron | 25.0% |
| ! | GGATTAATGTCTTGATTAAA+TGG | + | chr2_2:32285757-32285776 | Msa0248370:intron | 25.0% |
| !! | GTATATTTTCATTCATGTGT+TGG | + | chr2_2:32286338-32286357 | Msa0248370:intron | 25.0% |
| ! | TATGAAAGTTGTGGTATATA+AGG | - | chr2_2:32286390-32286409 | None:intergenic | 25.0% |
| ! | TTCCATGATATAAAAGTTTC+TGG | + | chr2_2:32286445-32286464 | Msa0248370:intron | 25.0% |
| !! | TTCCAGAAACTTTTATATCA+TGG | - | chr2_2:32286450-32286469 | None:intergenic | 25.0% |
| ! | AAGTTCAAGAGCAAAATTAA+TGG | - | chr2_2:32286826-32286845 | None:intergenic | 25.0% |
| ! | GGATATGAAATACATTTAAG+AGG | + | chr2_2:32286931-32286950 | Msa0248370:three_prime_UTR | 25.0% |
| !! | TGCAATTTAATGGACAAAAT+TGG | + | chr2_2:32286955-32286974 | Msa0248370:three_prime_UTR | 25.0% |
| ! | AAACATTCTATACATAGGTA+GGG | - | chr2_2:32287050-32287069 | None:intergenic | 25.0% |
| ! | AACACAAACATTCTATACAT+AGG | - | chr2_2:32287055-32287074 | None:intergenic | 25.0% |
| ! | AATGTTTGTGTTGTGATAAA+TGG | + | chr2_2:32287063-32287082 | Msa0248370:three_prime_UTR | 25.0% |
| !!! | TACAATAATGGGTGTAAAAA+TGG | - | chr2_2:32287124-32287143 | None:intergenic | 25.0% |
| ! | GTAAGCATTATGTACAATAA+TGG | - | chr2_2:32287136-32287155 | None:intergenic | 25.0% |
| TCTCAAAAATCAGCTAGAAT+CGG | + | chr2_2:32282554-32282573 | Msa0248370:CDS | 30.0% | |
| ! | ACATGGAATTTTCTCCAAAA+GGG | - | chr2_2:32282642-32282661 | None:intergenic | 30.0% |
| ! | TACATGGAATTTTCTCCAAA+AGG | - | chr2_2:32282643-32282662 | None:intergenic | 30.0% |
| ! | AAAAAAGTTAGTTTCGCACT+TGG | + | chr2_2:32283070-32283089 | Msa0248370:intron | 30.0% |
| ! | AAAAAGTTAGTTTCGCACTT+GGG | + | chr2_2:32283071-32283090 | Msa0248370:intron | 30.0% |
| TGTATATGTATAATACCCGT+AGG | + | chr2_2:32283761-32283780 | Msa0248370:intron | 30.0% | |
| AAACTTCGATATGAATCCTA+CGG | - | chr2_2:32283780-32283799 | None:intergenic | 30.0% | |
| TAGGATTCATATCGAAGTTT+GGG | + | chr2_2:32283780-32283799 | Msa0248370:intron | 30.0% | |
| AAAGGCAAATAGAAAACCAT+AGG | - | chr2_2:32283929-32283948 | None:intergenic | 30.0% | |
| !! | GCTCTACTTGTTATATCAAT+TGG | + | chr2_2:32283980-32283999 | Msa0248370:CDS | 30.0% |
| !! | TTTTTATTTGGTTCAACCCT+GGG | + | chr2_2:32284038-32284057 | Msa0248370:CDS | 30.0% |
| GCATTTCTATTCATTACCTT+AGG | - | chr2_2:32284145-32284164 | None:intergenic | 30.0% | |
| ACTCATATTGCACAAAAACA+TGG | - | chr2_2:32284197-32284216 | None:intergenic | 30.0% | |
| TTTGTGCAATATGAGTTGTT+TGG | + | chr2_2:32284201-32284220 | Msa0248370:intron | 30.0% | |
| CAAATTAGATTGTGATAGCT+TGG | + | chr2_2:32284294-32284313 | Msa0248370:intron | 30.0% | |
| TTCCGAAATATTGTTAAGGT+TGG | - | chr2_2:32284480-32284499 | None:intergenic | 30.0% | |
| ! | GAAGGTTTTCCATTTTGTTA+CGG | + | chr2_2:32284687-32284706 | Msa0248370:intron | 30.0% |
| AAACTACTACCGTAACAAAA+TGG | - | chr2_2:32284699-32284718 | None:intergenic | 30.0% | |
| ! | TAATGATGGAACTGAAAAAC+CGG | - | chr2_2:32284728-32284747 | None:intergenic | 30.0% |
| ! | TTGCACTAGTTTATGATTCT+AGG | + | chr2_2:32284839-32284858 | Msa0248370:intron | 30.0% |
| TTACAAATTACATACAGGGA+CGG | + | chr2_2:32285020-32285039 | Msa0248370:intron | 30.0% | |
| ! | TTGGTGAATTTTATTGAGAG+GGG | - | chr2_2:32285076-32285095 | None:intergenic | 30.0% |
| ! | CTTGGTGAATTTTATTGAGA+GGG | - | chr2_2:32285077-32285096 | None:intergenic | 30.0% |
| ACGTTTGCAATAAACCAAAT+AGG | + | chr2_2:32285125-32285144 | Msa0248370:intron | 30.0% | |
| GCTTAATACATTTACCTAGA+TGG | - | chr2_2:32285151-32285170 | None:intergenic | 30.0% | |
| ! | CCCATTAATTTAGAACTTGT+TGG | + | chr2_2:32285397-32285416 | Msa0248370:intron | 30.0% |
| !! | CCCAACAAGTTCTAAATTAA+TGG | - | chr2_2:32285401-32285420 | None:intergenic | 30.0% |
| !! | TAATTTAGAACTTGTTGGGT+TGG | + | chr2_2:32285402-32285421 | Msa0248370:intron | 30.0% |
| !! | AATTTAGAACTTGTTGGGTT+GGG | + | chr2_2:32285403-32285422 | Msa0248370:intron | 30.0% |
| TTATTGTGAATCGTGAGATA+TGG | + | chr2_2:32285509-32285528 | Msa0248370:intron | 30.0% | |
| TATTGTGAATCGTGAGATAT+GGG | + | chr2_2:32285510-32285529 | Msa0248370:intron | 30.0% | |
| TGGATTTATGAATCGCATAT+TGG | - | chr2_2:32285657-32285676 | None:intergenic | 30.0% | |
| TAAATTAAAAGGAGGCTAAC+TGG | - | chr2_2:32286002-32286021 | None:intergenic | 30.0% | |
| ! | TCATTCATGTGTTGGTATTT+AGG | + | chr2_2:32286346-32286365 | Msa0248370:intron | 30.0% |
| TGACAAAACTATGAAAGTTG+TGG | - | chr2_2:32286399-32286418 | None:intergenic | 30.0% | |
| AATGAATAGGAATAGCTAAC+TGG | - | chr2_2:32286554-32286573 | None:intergenic | 30.0% | |
| TATTAGGTGGAAGAATGAAT+AGG | - | chr2_2:32286567-32286586 | None:intergenic | 30.0% | |
| TTCTCTTGTCTGAAAAGTAA+TGG | + | chr2_2:32286776-32286795 | Msa0248370:three_prime_UTR | 30.0% | |
| CACATTAGGGATTAATAGAA+TGG | + | chr2_2:32286910-32286929 | Msa0248370:three_prime_UTR | 30.0% | |
| ! | TTTAAGAGGGTGCAATTTAA+TGG | + | chr2_2:32286945-32286964 | Msa0248370:three_prime_UTR | 30.0% |
| TTTCAATACCATACACTCAA+TGG | - | chr2_2:32287016-32287035 | None:intergenic | 30.0% | |
| CAAACATTCTATACATAGGT+AGG | - | chr2_2:32287051-32287070 | None:intergenic | 30.0% | |
| TCAAATTCGACAGTGAAACA+AGG | + | chr2_2:32282439-32282458 | Msa0248370:five_prime_UTR | 35.0% | |
| ! | ATCGGTTACTGTTTTCTCTT+TGG | + | chr2_2:32282572-32282591 | Msa0248370:CDS | 35.0% |
| ! | CATGGAATTTTCTCCAAAAG+GGG | - | chr2_2:32282641-32282660 | None:intergenic | 35.0% |
| GCTAAAGAAAGGAACTTACA+TGG | - | chr2_2:32282659-32282678 | None:intergenic | 35.0% | |
| TGGGTATTCGTGTTAATGAT+TGG | + | chr2_2:32282711-32282730 | Msa0248370:intron | 35.0% | |
| TTCGATGCTTAGAATTGTGT+TGG | + | chr2_2:32282765-32282784 | Msa0248370:intron | 35.0% | |
| TATAGGTGTCAATCACATGT+CGG | - | chr2_2:32282797-32282816 | None:intergenic | 35.0% | |
| TGTCTGTGTCTGTTTCATAT+AGG | - | chr2_2:32282814-32282833 | None:intergenic | 35.0% | |
| GTTCAAATTCAGCTACTCAA+CGG | + | chr2_2:32283166-32283185 | Msa0248370:intron | 35.0% | |
| CATAGCGAGATTTGAACAAA+TGG | - | chr2_2:32283254-32283273 | None:intergenic | 35.0% | |
| ! | GCACTAGTGTTGTTAAATAG+AGG | - | chr2_2:32283294-32283313 | None:intergenic | 35.0% |
| !! | TTCACAAGTTTCAAGTTCTC+TGG | + | chr2_2:32283337-32283356 | Msa0248370:intron | 35.0% |
| TTGATACCATTCCTTTGTGT+GGG | - | chr2_2:32283484-32283503 | None:intergenic | 35.0% | |
| !! | GTTTTAGCCCTCATAATGAT+CGG | + | chr2_2:32283552-32283571 | Msa0248370:CDS | 35.0% |
| ! | ATGTATCACGCCTATCATTT+TGG | - | chr2_2:32283587-32283606 | None:intergenic | 35.0% |
| AAAATGATAGGCGTGATACA+TGG | + | chr2_2:32283586-32283605 | Msa0248370:CDS | 35.0% | |
| ! | AATCTGGAATGAAGAATGCA+AGG | - | chr2_2:32283662-32283681 | None:intergenic | 35.0% |
| TGTCAATCATCAATCTCACA+AGG | - | chr2_2:32283739-32283758 | None:intergenic | 35.0% | |
| AACTTCGATATGAATCCTAC+GGG | - | chr2_2:32283779-32283798 | None:intergenic | 35.0% | |
| GTAGGATTCATATCGAAGTT+TGG | + | chr2_2:32283779-32283798 | Msa0248370:intron | 35.0% | |
| AGGATTCATATCGAAGTTTG+GGG | + | chr2_2:32283781-32283800 | Msa0248370:intron | 35.0% | |
| !! | CTTTTTATTTGGTTCAACCC+TGG | + | chr2_2:32284037-32284056 | Msa0248370:CDS | 35.0% |
| !! | TTTTATTTGGTTCAACCCTG+GGG | + | chr2_2:32284039-32284058 | Msa0248370:CDS | 35.0% |
| AAAAGCAAGAATCATCGACA+TGG | - | chr2_2:32284098-32284117 | None:intergenic | 35.0% | |
| ATAGAGCTTCAATTGCTTAG+AGG | - | chr2_2:32284167-32284186 | None:intergenic | 35.0% | |
| AGAATGTGTGAGGGTTTATA+GGG | - | chr2_2:32284528-32284547 | None:intergenic | 35.0% | |
| TAGAATGTGTGAGGGTTTAT+AGG | - | chr2_2:32284529-32284548 | None:intergenic | 35.0% | |
| !! | CAGTTTGTTAGAATGTGTGA+GGG | - | chr2_2:32284537-32284556 | None:intergenic | 35.0% |
| ATTAATTGCTGATAGGACAC+TGG | - | chr2_2:32284623-32284642 | None:intergenic | 35.0% | |
| !!! | TATTTTAACGGACGATTGGA+AGG | + | chr2_2:32284669-32284688 | Msa0248370:intron | 35.0% |
| ! | ACGGTAGTAGTTTTCTTTTC+CGG | + | chr2_2:32284706-32284725 | Msa0248370:intron | 35.0% |
| ATTGAACCTGGTATGATTCT+GGG | + | chr2_2:32284777-32284796 | Msa0248370:intron | 35.0% | |
| TGTTCAATCATCCTCAAACT+CGG | - | chr2_2:32284963-32284982 | None:intergenic | 35.0% | |
| GGGCTTACAAATTACATACA+GGG | + | chr2_2:32285016-32285035 | Msa0248370:intron | 35.0% | |
| !! | GCTTGGTGAATTTTATTGAG+AGG | - | chr2_2:32285078-32285097 | None:intergenic | 35.0% |
| TATTGCAAACGTGCAACAAT+GGG | - | chr2_2:32285117-32285136 | None:intergenic | 35.0% | |
| TTATTGCAAACGTGCAACAA+TGG | - | chr2_2:32285118-32285137 | None:intergenic | 35.0% | |
| ATAAACCAAATAGGCCATCT+AGG | + | chr2_2:32285134-32285153 | Msa0248370:intron | 35.0% | |
| ATTTACCTAGATGGCCTATT+TGG | - | chr2_2:32285142-32285161 | None:intergenic | 35.0% | |
| AGTTGAATCCAACTCAAACA+AGG | + | chr2_2:32285197-32285216 | Msa0248370:intron | 35.0% | |
| GTTGAATCCAACTCAAACAA+GGG | + | chr2_2:32285198-32285217 | Msa0248370:intron | 35.0% | |
| GCTCAAAATTAGTACACTGT+GGG | - | chr2_2:32285239-32285258 | None:intergenic | 35.0% | |
| ! | AACTTTGTGATGTGCTATTG+AGG | + | chr2_2:32285735-32285754 | Msa0248370:intron | 35.0% |
| ! | ACTTTGTGATGTGCTATTGA+GGG | + | chr2_2:32285736-32285755 | Msa0248370:intron | 35.0% |
| AACTGGATGGAAATAAGTAC+TGG | - | chr2_2:32285985-32286004 | None:intergenic | 35.0% | |
| ATAGTGCAAAAACAGGTGAA+CGG | + | chr2_2:32286051-32286070 | Msa0248370:intron | 35.0% | |
| TAAAGTGATATCACAGATGC+AGG | - | chr2_2:32286087-32286106 | None:intergenic | 35.0% | |
| CTAGTACTATTACCTGCTTT+AGG | - | chr2_2:32286297-32286316 | None:intergenic | 35.0% | |
| GAAAGTTGTGGTATATAAGG+AGG | - | chr2_2:32286387-32286406 | None:intergenic | 35.0% | |
| AAAAGGCAAAAAGGAGGAAA+AGG | + | chr2_2:32286520-32286539 | Msa0248370:CDS | 35.0% | |
| AGCTCAGATATGATAGATGT+TGG | + | chr2_2:32286647-32286666 | Msa0248370:CDS | 35.0% | |
| CAGATATGATAGATGTTGGT+TGG | + | chr2_2:32286651-32286670 | Msa0248370:CDS | 35.0% | |
| CCTAATGTGACAAAAGATCA+GGG | - | chr2_2:32286899-32286918 | None:intergenic | 35.0% | |
| ! | CCTGATCTTTTGTCACATTA+GGG | + | chr2_2:32286897-32286916 | Msa0248370:three_prime_UTR | 35.0% |
| ATTCTATACATAGGTAGGGA+AGG | - | chr2_2:32287046-32287065 | None:intergenic | 35.0% | |
| GCATGATAAACAACACGACA+TGG | - | chr2_2:32282486-32282505 | None:intergenic | 40.0% | |
| TGCTGCACATCTTTAACATG+TGG | + | chr2_2:32282503-32282522 | Msa0248370:CDS | 40.0% | |
| GTGCGTCTCTTATAGTTTCT+TGG | + | chr2_2:32282594-32282613 | Msa0248370:CDS | 40.0% | |
| TCTTGGATTCTCAGAGAAGT+TGG | + | chr2_2:32282611-32282630 | Msa0248370:CDS | 40.0% | |
| CTGACATTGATACGTCAACA+TGG | - | chr2_2:32282876-32282895 | None:intergenic | 40.0% | |
| GTATCAATGTCAGAGTTGTC+TGG | + | chr2_2:32282883-32282902 | Msa0248370:intron | 40.0% | |
| ATGAAGTACGGACATAGACA+AGG | - | chr2_2:32282912-32282931 | None:intergenic | 40.0% | |
| TGTCTATGTCCGTACTTCAT+AGG | + | chr2_2:32282912-32282931 | Msa0248370:intron | 40.0% | |
| TTGTCGAATTGGGGCTATAA+CGG | - | chr2_2:32283207-32283226 | None:intergenic | 40.0% | |
| !! | AGTTCTCTGGTTCTCTGAAT+TGG | + | chr2_2:32283350-32283369 | Msa0248370:intron | 40.0% |
| ACTTGCAGGGATAGATTCAT+CGG | + | chr2_2:32283455-32283474 | Msa0248370:intron | 40.0% | |
| CTTGATACCATTCCTTTGTG+TGG | - | chr2_2:32283485-32283504 | None:intergenic | 40.0% | |
| GGGCTAAAACAACAAAGAAC+AGG | - | chr2_2:32283542-32283561 | None:intergenic | 40.0% | |
| CTTCACACCGATCATTATGA+GGG | - | chr2_2:32283562-32283581 | None:intergenic | 40.0% | |
| GTGTGAAGGACCAAAATGAT+AGG | + | chr2_2:32283574-32283593 | Msa0248370:CDS | 40.0% | |
| GGACTGTAAAGTCAGTGATA+TGG | + | chr2_2:32283622-32283641 | Msa0248370:CDS | 40.0% | |
| TACGCTAGCATTATGGAATC+TGG | - | chr2_2:32283678-32283697 | None:intergenic | 40.0% | |
| GATTCCATAATGCTAGCGTA+TGG | + | chr2_2:32283678-32283697 | Msa0248370:CDS | 40.0% | |
| CATACCATACGCTAGCATTA+TGG | - | chr2_2:32283685-32283704 | None:intergenic | 40.0% | |
| AATCTCACAAGGAACCAAGA+GGG | - | chr2_2:32283728-32283747 | None:intergenic | 40.0% | |
| CCATGCATCATTCCAATTGT+GGG | - | chr2_2:32283852-32283871 | None:intergenic | 40.0% | |
| CCACAATTGGAATGATGCAT+GGG | + | chr2_2:32283850-32283869 | Msa0248370:CDS | 40.0% | |
| ! | TTTATTTGGTTCAACCCTGG+GGG | + | chr2_2:32284040-32284059 | Msa0248370:CDS | 40.0% |
| CAAGAATCATCGACATGGAA+AGG | - | chr2_2:32284093-32284112 | None:intergenic | 40.0% | |
| AGTTGTTGCTCTACATCCTA+AGG | + | chr2_2:32284126-32284145 | Msa0248370:CDS | 40.0% | |
| TGAGTTCAAGAGCTCTACAA+TGG | + | chr2_2:32284364-32284383 | Msa0248370:intron | 40.0% | |
| AGCTCTACAATGGTGAGAAA+TGG | + | chr2_2:32284374-32284393 | Msa0248370:intron | 40.0% | |
| !!! | GGAGAGTTTTCTTTCTGGTT+AGG | - | chr2_2:32284454-32284473 | None:intergenic | 40.0% |
| ! | GGTTAGGAGAGTTTTCTTTC+TGG | - | chr2_2:32284459-32284478 | None:intergenic | 40.0% |
| GGGTTTATAGGGAAAAGGAT+GGG | - | chr2_2:32284517-32284536 | None:intergenic | 40.0% | |
| AGGGTTTATAGGGAAAAGGA+TGG | - | chr2_2:32284518-32284537 | None:intergenic | 40.0% | |
| TGTGAGGGTTTATAGGGAAA+AGG | - | chr2_2:32284522-32284541 | None:intergenic | 40.0% | |
| !! | GCAGTTTGTTAGAATGTGTG+AGG | - | chr2_2:32284538-32284557 | None:intergenic | 40.0% |
| TAGAGGAAGAATTGCTGATG+TGG | - | chr2_2:32284560-32284579 | None:intergenic | 40.0% | |
| AATAACCAGGCTGAAAAGAC+AGG | - | chr2_2:32284584-32284603 | None:intergenic | 40.0% | |
| ! | TGTCTTTTCAGCCTGGTTAT+TGG | + | chr2_2:32284583-32284602 | Msa0248370:intron | 40.0% |
| ! | GTCTTTTCAGCCTGGTTATT+GGG | + | chr2_2:32284584-32284603 | Msa0248370:intron | 40.0% |
| TGTTGTTGTGACATTGAACC+TGG | + | chr2_2:32284765-32284784 | Msa0248370:intron | 40.0% | |
| CATTGAACCTGGTATGATTC+TGG | + | chr2_2:32284776-32284795 | Msa0248370:intron | 40.0% | |
| GGGGCTTACAAATTACATAC+AGG | + | chr2_2:32285015-32285034 | Msa0248370:intron | 40.0% | |
| AAATTACATACAGGGACGGA+GGG | + | chr2_2:32285024-32285043 | Msa0248370:intron | 40.0% | |
| CAAAATTAGTACACTGTGGG+TGG | - | chr2_2:32285236-32285255 | None:intergenic | 40.0% | |
| GGCTCAAAATTAGTACACTG+TGG | - | chr2_2:32285240-32285259 | None:intergenic | 40.0% | |
| !! | CAGCTACTGTTTCTGTCATA+TGG | - | chr2_2:32285677-32285696 | None:intergenic | 40.0% |
| CATATGACAGAAACAGTAGC+TGG | + | chr2_2:32285675-32285694 | Msa0248370:intron | 40.0% | |
| TGTCAGTAGCTGCATTTAGA+GGG | + | chr2_2:32285785-32285804 | Msa0248370:intron | 40.0% | |
| TTAAAAGGAGGCTAACTGGA+TGG | - | chr2_2:32285998-32286017 | None:intergenic | 40.0% | |
| CTGTGCATATGTGTGTTACA+CGG | + | chr2_2:32286107-32286126 | Msa0248370:CDS | 40.0% | |
| TGTGCATATGTGTGTTACAC+GGG | + | chr2_2:32286108-32286127 | Msa0248370:CDS | 40.0% | |
| ! | AGATGGTGGTGATAAGAATG+TGG | - | chr2_2:32286271-32286290 | None:intergenic | 40.0% |
| ! | TTACCTGCTTTAGGTGAAGA+TGG | - | chr2_2:32286288-32286307 | None:intergenic | 40.0% |
| CAAACCTCTTCTTGAAGAAG+TGG | + | chr2_2:32286490-32286509 | Msa0248370:CDS | 40.0% | |
| TCTTCCACTTCTTCAAGAAG+AGG | - | chr2_2:32286497-32286516 | None:intergenic | 40.0% | |
| CTTCTTGAAGAAGTGGAAGA+AGG | + | chr2_2:32286497-32286516 | Msa0248370:CDS | 40.0% | |
| GAAGAAGTGGAAGAAGGAAA+AGG | + | chr2_2:32286503-32286522 | Msa0248370:CDS | 40.0% | |
| GGAAGAAGGAAAAGGCAAAA+AGG | + | chr2_2:32286511-32286530 | Msa0248370:CDS | 40.0% | |
| AGAAGGAAAAGGCAAAAAGG+AGG | + | chr2_2:32286514-32286533 | Msa0248370:CDS | 40.0% | |
| TATTCAGCCATGCTTCTTTC+TGG | + | chr2_2:32286605-32286624 | Msa0248370:CDS | 40.0% | |
| ! | ATGTTGGTTGGACATCAGTA+TGG | + | chr2_2:32286663-32286682 | Msa0248370:CDS | 40.0% |
| ! | TGTTGGTTGGACATCAGTAT+GGG | + | chr2_2:32286664-32286683 | Msa0248370:CDS | 40.0% |
| AACTAAGCAAATTCGCGATC+AGG | - | chr2_2:32286758-32286777 | None:intergenic | 40.0% | |
| ! | CCCTGATCTTTTGTCACATT+AGG | + | chr2_2:32286896-32286915 | Msa0248370:three_prime_UTR | 40.0% |
| CCCTAATGTGACAAAAGATC+AGG | - | chr2_2:32286900-32286919 | None:intergenic | 40.0% | |
| TAGCAAGACCATTGAGTGTA+TGG | + | chr2_2:32287005-32287024 | Msa0248370:three_prime_UTR | 40.0% | |
| AGAGATTCCAGATGCTACAG+AGG | - | chr2_2:32282537-32282556 | None:intergenic | 45.0% | |
| !! | ACTCAACGGTGTTGTGCTAT+AGG | + | chr2_2:32283180-32283199 | Msa0248370:intron | 45.0% |
| !! | CTCAACGGTGTTGTGCTATA+GGG | + | chr2_2:32283181-32283200 | Msa0248370:intron | 45.0% |
| TTCATCGGATACCCACACAA+AGG | + | chr2_2:32283470-32283489 | Msa0248370:CDS | 45.0% | |
| CCTTCACACCGATCATTATG+AGG | - | chr2_2:32283563-32283582 | None:intergenic | 45.0% | |
| CCTCATAATGATCGGTGTGA+AGG | + | chr2_2:32283560-32283579 | Msa0248370:CDS | 45.0% | |
| ACTTTACAGTCCATCCACCA+TGG | - | chr2_2:32283614-32283633 | None:intergenic | 45.0% | |
| AGTCCTTACTTTCTCCCTCT+TGG | + | chr2_2:32283711-32283730 | Msa0248370:intron | 45.0% | |
| GAACCAAGAGGGAGAAAGTA+AGG | - | chr2_2:32283717-32283736 | None:intergenic | 45.0% | |
| CAATCTCACAAGGAACCAAG+AGG | - | chr2_2:32283729-32283748 | None:intergenic | 45.0% | |
| ! | TTCATATCGAAGTTTGGGGC+TGG | + | chr2_2:32283785-32283804 | Msa0248370:CDS | 45.0% |
| TACTCGACTGTACCCACAAT+TGG | + | chr2_2:32283837-32283856 | Msa0248370:CDS | 45.0% | |
| CCCACAATTGGAATGATGCA+TGG | + | chr2_2:32283849-32283868 | Msa0248370:CDS | 45.0% | |
| CCCATGCATCATTCCAATTG+TGG | - | chr2_2:32283853-32283872 | None:intergenic | 45.0% | |
| ATTGCAGCATTTACGCTGTC+AGG | + | chr2_2:32284010-32284029 | Msa0248370:CDS | 45.0% | |
| !! | GTTTGGAGTTCTAGGAACTC+TGG | - | chr2_2:32284417-32284436 | None:intergenic | 45.0% |
| AGGAACATAGTGCTCTGGTT+TGG | - | chr2_2:32284434-32284453 | None:intergenic | 45.0% | |
| TGGTTAGGAACATAGTGCTC+TGG | - | chr2_2:32284439-32284458 | None:intergenic | 45.0% | |
| AGGCTGAAAAGACAGGTTAG+AGG | - | chr2_2:32284577-32284596 | None:intergenic | 45.0% | |
| ! | TCTAACCTGTCTTTTCAGCC+TGG | + | chr2_2:32284576-32284595 | Msa0248370:intron | 45.0% |
| !!! | GCTGATAGGACACTGGTTTT+GGG | - | chr2_2:32284616-32284635 | None:intergenic | 45.0% |
| !!! | TGCTGATAGGACACTGGTTT+TGG | - | chr2_2:32284617-32284636 | None:intergenic | 45.0% |
| TTAGGACCCAGAATCATACC+AGG | - | chr2_2:32284786-32284805 | None:intergenic | 45.0% | |
| GCATAGAATCACCGAGTTTG+AGG | + | chr2_2:32284949-32284968 | Msa0248370:intron | 45.0% | |
| CAAATTACATACAGGGACGG+AGG | + | chr2_2:32285023-32285042 | Msa0248370:intron | 45.0% | |
| !! | TTGAGAGGGGCCATTTTGTA+TGG | - | chr2_2:32285063-32285082 | None:intergenic | 45.0% |
| ! | CGTGCAACAATGGGTTTCTT+CGG | - | chr2_2:32285108-32285127 | None:intergenic | 45.0% |
| ! | CTAGGTTCCCTTGTTTGAGT+TGG | - | chr2_2:32285208-32285227 | None:intergenic | 45.0% |
| ATTAGTACACTGTGGGTGGT+GGG | - | chr2_2:32285232-32285251 | None:intergenic | 45.0% | |
| AATTAGTACACTGTGGGTGG+TGG | - | chr2_2:32285233-32285252 | None:intergenic | 45.0% | |
| AGACACATCGACAAATCGCA+AGG | - | chr2_2:32285261-32285280 | None:intergenic | 45.0% | |
| ! | GGTTGGGTCTTTGTTTGATC+CGG | + | chr2_2:32285419-32285438 | Msa0248370:intron | 45.0% |
| ! | TCGAGTTGCTATGCTTAGAC+CGG | - | chr2_2:32285441-32285460 | None:intergenic | 45.0% |
| CTGTCAGTAGCTGCATTTAG+AGG | + | chr2_2:32285784-32285803 | Msa0248370:intron | 45.0% | |
| GTCAGTAGCTGCATTTAGAG+GGG | + | chr2_2:32285786-32285805 | Msa0248370:intron | 45.0% | |
| TTGTATTCTGCTCTTCGTGC+TGG | + | chr2_2:32286237-32286256 | Msa0248370:CDS | 45.0% | |
| AGCAGGTAATAGTACTAGCC+AGG | + | chr2_2:32286299-32286318 | Msa0248370:intron | 45.0% | |
| ACGAGATCGTAAAAGAGTCC+TGG | - | chr2_2:32286320-32286339 | None:intergenic | 45.0% | |
| TAGCGAGGGCAAATATTAGG+TGG | - | chr2_2:32286580-32286599 | None:intergenic | 45.0% | |
| TGCTAGCGAGGGCAAATATT+AGG | - | chr2_2:32286583-32286602 | None:intergenic | 45.0% | |
| ATCTGAGCTTTCAGATGTGC+TGG | - | chr2_2:32286636-32286655 | None:intergenic | 45.0% | |
| GTTGGACATCAGTATGGGTT+CGG | + | chr2_2:32286669-32286688 | Msa0248370:CDS | 45.0% | |
| ACATCAGTATGGGTTCGGAT+TGG | + | chr2_2:32286674-32286693 | Msa0248370:CDS | 45.0% | |
| TTACTGCTGGGTTGTATCTG+TGG | + | chr2_2:32286708-32286727 | Msa0248370:CDS | 45.0% | |
| GTTGTATCTGTGGAGTCTCT+TGG | + | chr2_2:32286718-32286737 | Msa0248370:CDS | 45.0% | |
| TCGCGATCAGGAAACAACAA+AGG | - | chr2_2:32286746-32286765 | None:intergenic | 45.0% | |
| TCGGAACAGAGTAAGAGAGA+GGG | - | chr2_2:32286852-32286871 | None:intergenic | 45.0% | |
| TTCGGAACAGAGTAAGAGAG+AGG | - | chr2_2:32286853-32286872 | None:intergenic | 45.0% | |
| CTTAAACACCAGCACTCACT+GGG | - | chr2_2:32287173-32287192 | None:intergenic | 45.0% | |
| !!! | TTAATTTGTTTATATTTTAA+CGG | + | chr2_2:32284657-32284676 | Msa0248370:intron | 5.0% |
| CTCTGTTCCTCTGTAGCATC+TGG | + | chr2_2:32282527-32282546 | Msa0248370:CDS | 50.0% | |
| !! | AGAAGTTGGAGCACCCCTTT+TGG | + | chr2_2:32282625-32282644 | Msa0248370:CDS | 50.0% |
| AAACGTCGTGCTCGGAACAA+AGG | - | chr2_2:32283379-32283398 | None:intergenic | 50.0% | |
| AGCACAAGAAACGTCGTGCT+CGG | - | chr2_2:32283387-32283406 | None:intergenic | 50.0% | |
| CGGATACCCACACAAAGGAA+TGG | + | chr2_2:32283475-32283494 | Msa0248370:CDS | 50.0% | |
| ! | ATACATGGCACCATGGTGGA+TGG | + | chr2_2:32283601-32283620 | Msa0248370:CDS | 50.0% |
| !! | GTGCTCTGGTTTGGAGTTCT+AGG | - | chr2_2:32284425-32284444 | None:intergenic | 50.0% |
| TCAGCCTGGTTATTGGGCTT+AGG | + | chr2_2:32284590-32284609 | Msa0248370:intron | 50.0% | |
| TACACTCGCAATGTCTCGCA+TGG | + | chr2_2:32284912-32284931 | Msa0248370:intron | 50.0% | |
| CAATGTCTCGCATGGACTCA+TGG | + | chr2_2:32284920-32284939 | Msa0248370:intron | 50.0% | |
| ! | ACAATGGGTTTCTTCGGTGG+CGG | - | chr2_2:32285102-32285121 | None:intergenic | 50.0% |
| ! | GCAACAATGGGTTTCTTCGG+TGG | - | chr2_2:32285105-32285124 | None:intergenic | 50.0% |
| ! | GGTCTTTCTAGTGAACCTCG+AGG | + | chr2_2:32286129-32286148 | Msa0248370:CDS | 50.0% |
| CCATTGCACTCATAACCTCG+AGG | - | chr2_2:32286147-32286166 | None:intergenic | 50.0% | |
| CCTCGAGGTTATGAGTGCAA+TGG | + | chr2_2:32286144-32286163 | Msa0248370:CDS | 50.0% | |
| AAGTCCAGAGCTGTAAGCAC+CGG | + | chr2_2:32286174-32286193 | Msa0248370:CDS | 50.0% | |
| ! | CCTGCTTTAGGTGAAGATGG+TGG | - | chr2_2:32286285-32286304 | None:intergenic | 50.0% |
| CCACCATCTTCACCTAAAGC+AGG | + | chr2_2:32286282-32286301 | Msa0248370:CDS | 50.0% | |
| GGCTGAATACATGCTAGCGA+GGG | - | chr2_2:32286594-32286613 | None:intergenic | 50.0% | |
| TGGCTGAATACATGCTAGCG+AGG | - | chr2_2:32286595-32286614 | None:intergenic | 50.0% | |
| CAGCCATGCTTCTTTCTGGA+TGG | + | chr2_2:32286609-32286628 | Msa0248370:CDS | 50.0% | |
| GGTCCATCCAGAAAGAAGCA+TGG | - | chr2_2:32286615-32286634 | None:intergenic | 50.0% | |
| !! | GGTTCGGATTGGCACAGAAT+GGG | + | chr2_2:32286685-32286704 | Msa0248370:CDS | 50.0% |
| !! | GCACAGAATGGGTTACTGCT+GGG | + | chr2_2:32286696-32286715 | Msa0248370:CDS | 50.0% |
| CCTTAAACACCAGCACTCAC+TGG | - | chr2_2:32287174-32287193 | None:intergenic | 50.0% | |
| !! | CCAGTGAGTGCTGGTGTTTA+AGG | + | chr2_2:32287171-32287190 | Msa0248370:three_prime_UTR | 50.0% |
| TCCCAAGCTCACGCGAAGAA+CGG | - | chr2_2:32283514-32283533 | None:intergenic | 55.0% | |
| AGGCGTGATACATGGCACCA+TGG | + | chr2_2:32283594-32283613 | Msa0248370:CDS | 55.0% | |
| CGTGATACATGGCACCATGG+TGG | + | chr2_2:32283597-32283616 | Msa0248370:CDS | 55.0% | |
| AACCCTGGGGGATATGACTG+TGG | + | chr2_2:32284052-32284071 | Msa0248370:CDS | 55.0% | |
| GACCACAGTCATATCCCCCA+GGG | - | chr2_2:32284057-32284076 | None:intergenic | 55.0% | |
| AGACCACAGTCATATCCCCC+AGG | - | chr2_2:32284058-32284077 | None:intergenic | 55.0% | |
| GGGAAAAGGATGGGTGAGTG+AGG | - | chr2_2:32284508-32284527 | None:intergenic | 55.0% | |
| TGGGCCTAAGCCCAATAACC+AGG | - | chr2_2:32284597-32284616 | None:intergenic | 55.0% | |
| CATGCCAAGAACGAGCGTAC+CGG | - | chr2_2:32286196-32286215 | None:intergenic | 55.0% | |
| !! | GGGTTCGGATTGGCACAGAA+TGG | + | chr2_2:32286684-32286703 | Msa0248370:CDS | 55.0% |
| !! | GGCACAGAATGGGTTACTGC+TGG | + | chr2_2:32286695-32286714 | Msa0248370:CDS | 55.0% |
| ATTGCACTCCCAGTGAGTGC+TGG | + | chr2_2:32287162-32287181 | Msa0248370:three_prime_UTR | 55.0% | |
| AGCCGTTCTTCGCGTGAGCT+TGG | + | chr2_2:32283509-32283528 | Msa0248370:CDS | 60.0% | |
| GCCGTTCTTCGCGTGAGCTT+GGG | + | chr2_2:32283510-32283529 | Msa0248370:CDS | 60.0% | |
| !! | GTTTCTTCGGTGGCGGAGCT+TGG | - | chr2_2:32285095-32285114 | None:intergenic | 60.0% |
| !! | ACACTGTGGGTGGTGGGACT+AGG | - | chr2_2:32285226-32285245 | None:intergenic | 60.0% |
| ! | CGTACCGGTGCTTACAGCTC+TGG | - | chr2_2:32286181-32286200 | None:intergenic | 60.0% |
| !! | AGCACCGGTACGCTCGTTCT+TGG | + | chr2_2:32286189-32286208 | Msa0248370:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 32282351 | 32287214 | 32282351 | ID=Msa0248370;Name=Msa0248370 |
| chr2_2 | mRNA | 32282351 | 32287214 | 32282351 | ID=Msa0248370-mRNA-1;Parent=Msa0248370;Name=Msa0248370-mRNA-1;_AED=0.06;_eAED=0.06;_QI=134|1|1|1|1|1|6|439|409 |
| chr2_2 | exon | 32282351 | 32282659 | 32282351 | ID=Msa0248370-mRNA-1:exon:11040;Parent=Msa0248370-mRNA-1 |
| chr2_2 | exon | 32283463 | 32283699 | 32283463 | ID=Msa0248370-mRNA-1:exon:11041;Parent=Msa0248370-mRNA-1 |
| chr2_2 | exon | 32283783 | 32283894 | 32283783 | ID=Msa0248370-mRNA-1:exon:11042;Parent=Msa0248370-mRNA-1 |
| chr2_2 | exon | 32283973 | 32284147 | 32283973 | ID=Msa0248370-mRNA-1:exon:11043;Parent=Msa0248370-mRNA-1 |
| chr2_2 | exon | 32286066 | 32286303 | 32286066 | ID=Msa0248370-mRNA-1:exon:11044;Parent=Msa0248370-mRNA-1 |
| chr2_2 | exon | 32286483 | 32287214 | 32286483 | ID=Msa0248370-mRNA-1:exon:11045;Parent=Msa0248370-mRNA-1 |
| chr2_2 | five_prime_UTR | 32282351 | 32282484 | 32282351 | ID=Msa0248370-mRNA-1:five_prime_utr;Parent=Msa0248370-mRNA-1 |
| chr2_2 | CDS | 32282485 | 32282659 | 32282485 | ID=Msa0248370-mRNA-1:cds;Parent=Msa0248370-mRNA-1 |
| chr2_2 | CDS | 32283463 | 32283699 | 32283463 | ID=Msa0248370-mRNA-1:cds;Parent=Msa0248370-mRNA-1 |
| chr2_2 | CDS | 32283783 | 32283894 | 32283783 | ID=Msa0248370-mRNA-1:cds;Parent=Msa0248370-mRNA-1 |
| chr2_2 | CDS | 32283973 | 32284147 | 32283973 | ID=Msa0248370-mRNA-1:cds;Parent=Msa0248370-mRNA-1 |
| chr2_2 | CDS | 32286066 | 32286303 | 32286066 | ID=Msa0248370-mRNA-1:cds;Parent=Msa0248370-mRNA-1 |
| chr2_2 | CDS | 32286483 | 32286775 | 32286483 | ID=Msa0248370-mRNA-1:cds;Parent=Msa0248370-mRNA-1 |
| chr2_2 | three_prime_UTR | 32286776 | 32287214 | 32286776 | ID=Msa0248370-mRNA-1:three_prime_utr;Parent=Msa0248370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
