AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0101120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0101120 MtrunA17_Chr1g0149451 95.419 633 27 2 8 638 9 641 0.0 1245
Msa0101120 MtrunA17_Chr3g0082141 31.229 301 175 6 52 325 141 436 4.28e-36 145
Msa0101120 MtrunA17_Chr1g0164561 33.333 219 120 4 132 325 7 224 3.09e-34 130
Msa0101120 MtrunA17_Chr5g0406251 26.689 296 193 10 35 325 275 551 4.33e-22 100
Msa0101120 MtrunA17_Chr4g0047211 29.293 198 132 3 133 329 116 306 6.58e-20 91.7
Msa0101120 MtrunA17_Chr4g0047191 29.293 198 132 3 133 329 121 311 7.33e-20 91.7
Msa0101120 MtrunA17_Chr5g0427651 25.497 302 203 8 33 327 623 909 1.25e-18 90.5
Msa0101120 MtrunA17_Chr4g0047201 28.283 198 134 3 133 329 277 467 2.90e-18 88.2
Msa0101120 MtrunA17_Chr2g0282321 29.293 198 132 3 133 329 238 428 8.98e-18 86.7
Msa0101120 MtrunA17_Chr1g0211611 24.917 301 200 11 39 333 285 565 5.08e-17 84.7
Msa0101120 MtrunA17_Chr3g0132791 25.733 307 203 9 33 329 630 921 1.03e-16 84.3
Msa0101120 MtrunA17_Chr3g0117811 21.802 344 225 9 1 319 11 335 5.60e-16 80.1
Msa0101120 MtrunA17_Chr3g0133541 26.642 274 179 8 60 324 313 573 1.10e-15 80.9
Msa0101120 MtrunA17_Chr2g0286501 35.766 137 83 4 144 277 126 260 4.06e-14 76.3
Msa0101120 MtrunA17_Chr5g0394681 26.087 184 129 3 133 315 181 358 5.09e-14 74.3
Msa0101120 MtrunA17_Chr4g0025041 28.931 159 100 5 160 316 98 245 5.55e-14 74.3
Msa0101120 MtrunA17_Chr1g0205071 23.810 189 137 3 133 320 173 355 5.84e-14 73.9
Msa0101120 MtrunA17_Chr8g0392871 25.180 278 183 9 47 319 735 992 6.88e-14 75.5
Msa0101120 MtrunA17_Chr6g0482711 31.056 161 103 4 161 319 759 913 2.42e-13 73.6
Msa0101120 MtrunA17_Chr4g0042731 24.837 306 203 11 35 328 121 411 3.09e-13 72.0
Msa0101120 MtrunA17_Chr4g0075541 25.253 198 139 4 133 329 162 351 3.28e-13 71.6
Msa0101120 MtrunA17_Chr3g0143531 22.909 275 177 5 54 318 25 274 3.91e-13 70.5
Msa0101120 MtrunA17_Chr7g0258051 23.308 266 190 6 52 316 14 266 5.88e-13 72.0
Msa0101120 MtrunA17_Chr5g0397931 28.977 176 109 5 161 326 522 691 6.07e-13 72.0
Msa0101120 MtrunA17_Chr1g0179331 28.322 286 176 11 45 322 549 813 1.54e-12 70.9
Msa0101120 MtrunA17_Chr1g0191171 24.841 314 197 10 24 319 650 942 2.43e-12 70.5
Msa0101120 MtrunA17_Chr2g0299991 26.000 200 129 7 129 316 138 330 3.11e-11 65.5
Msa0101120 MtrunA17_Chr5g0424501 27.381 168 108 5 149 315 286 440 3.45e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0101120 AT4G32250.3 63.542 576 196 7 24 594 14 580 0.0 740
Msa0101120 AT4G32250.2 63.542 576 196 7 24 594 14 580 0.0 740
Msa0101120 AT4G32250.1 63.542 576 196 7 24 594 14 580 0.0 740
Msa0101120 AT5G13530.1 32.237 304 172 10 51 325 135 433 3.60e-36 146
Msa0101120 AT5G13530.2 32.237 304 172 10 51 325 135 433 4.55e-36 146
Msa0101120 AT4G24480.1 26.866 335 204 10 22 330 624 943 3.38e-19 92.8
Msa0101120 AT4G24480.3 26.888 331 204 10 22 330 624 938 2.28e-18 90.1
Msa0101120 AT4G24480.2 26.888 331 204 10 22 330 624 938 2.37e-18 90.1
Msa0101120 AT4G35780.1 23.779 307 208 11 29 328 264 551 7.47e-18 87.8
Msa0101120 AT2G17700.1 23.795 332 222 13 6 325 230 542 1.02e-17 87.4
Msa0101120 AT4G38470.2 24.839 310 209 10 22 326 257 547 1.15e-17 87.0
Msa0101120 AT4G38470.1 25.484 310 203 11 22 326 257 543 2.12e-17 86.3
Msa0101120 AT1G05100.1 32.044 181 106 7 141 315 89 258 2.65e-16 81.3
Msa0101120 AT3G63260.1 25.521 192 135 3 130 319 178 363 9.41e-16 80.1
Msa0101120 AT3G01490.1 22.772 303 212 6 33 319 87 383 2.88e-15 79.0
Msa0101120 AT4G26890.1 28.108 185 119 4 134 316 77 249 1.44e-14 77.0
Msa0101120 AT5G01850.1 27.861 201 130 5 132 325 90 282 2.10e-14 75.5
Msa0101120 AT5G01850.2 27.861 201 130 5 132 325 114 306 2.34e-14 75.5
Msa0101120 AT3G46930.1 26.131 199 138 4 133 329 240 431 3.25e-14 75.9
Msa0101120 AT3G46930.2 26.131 199 138 4 133 329 275 466 3.62e-14 75.9
Msa0101120 AT4G38470.3 25.856 263 171 10 22 279 257 500 4.83e-14 75.5
Msa0101120 AT1G08720.1 26.761 284 182 9 47 325 665 927 1.12e-13 75.1
Msa0101120 AT1G62400.1 25.253 198 139 4 133 329 161 350 1.71e-13 73.2
Msa0101120 AT5G11850.1 24.818 274 184 7 52 320 607 863 2.69e-13 73.9
Msa0101120 AT1G73660.1 24.088 274 186 7 52 320 746 1002 5.14e-13 73.2
Msa0101120 AT1G32320.1 26.493 268 163 11 60 316 54 298 6.88e-13 70.5
Msa0101120 AT5G58950.1 25.126 199 141 3 133 330 284 475 7.34e-13 72.0
Msa0101120 AT2G42640.4 28.571 182 118 6 138 319 567 736 1.81e-12 70.9
Msa0101120 AT3G45790.1 28.571 231 143 6 44 264 92 310 2.11e-12 69.7
Msa0101120 AT2G42640.1 28.571 182 118 6 138 319 605 774 2.42e-12 70.9
Msa0101120 AT1G18160.1 24.088 274 186 7 52 320 713 969 2.59e-12 70.9
Msa0101120 AT5G03730.2 26.071 280 180 11 47 319 547 806 7.54e-12 68.9
Msa0101120 AT5G03730.1 26.071 280 180 11 47 319 547 806 7.54e-12 68.9
Msa0101120 AT3G46140.1 27.897 233 146 6 42 264 90 310 9.57e-12 67.8
Msa0101120 AT4G23050.2 29.299 157 103 4 161 315 567 717 1.04e-11 68.6
Msa0101120 AT4G23050.1 29.299 157 103 4 161 315 566 716 1.05e-11 68.6
Msa0101120 AT4G29810.3 27.363 201 125 8 129 318 147 337 1.50e-11 66.6
Msa0101120 AT4G29810.1 27.136 199 124 8 129 316 138 326 4.06e-11 65.5
Msa0101120 AT4G29810.2 27.136 199 124 8 129 316 147 335 4.43e-11 65.5

Find 226 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGAGTTGGGAGGCTTTC+TGG 0.085084 1_3:-7600209 None:intergenic
AAACTCTCCTTTCTTAAAAT+TGG 0.109577 1_3:+7596934 Msa0101120:five_prime_UTR
TGACAACGATCAAGCGATTT+TGG 0.146585 1_3:+7598994 Msa0101120:CDS
GATTCGAATGGCGTCGTAAA+AGG 0.159414 1_3:+7600590 Msa0101120:CDS
GGTTGAGTGTTAAGTTTATT+TGG 0.163491 1_3:+7597859 Msa0101120:five_prime_UTR
GAAGAACATTACATGGTTTA+AGG 0.171246 1_3:-7598967 None:intergenic
AGAGCTTCTGTTGGATTTAT+TGG 0.180068 1_3:+7600466 Msa0101120:CDS
ACCTCTGGTTTCCATTGTTC+TGG 0.192206 1_3:-7599106 None:intergenic
CATGGAATTTCAATGTTAAA+TGG 0.209362 1_3:+7598594 Msa0101120:CDS
AAGTTGTAAATATCCTTTAA+AGG 0.215622 1_3:+7601200 Msa0101120:three_prime_UTR
TAAGTCAATGAAGATGTATT+TGG 0.232759 1_3:+7598016 Msa0101120:five_prime_UTR
GTTGAGTGTTAAGTTTATTT+GGG 0.240390 1_3:+7597860 Msa0101120:five_prime_UTR
GTTAAGCACCATCTTTAAAA+AGG 0.241242 1_3:-7601005 None:intergenic
TGAATAACATTAGTTGAAAA+TGG 0.243158 1_3:+7601132 Msa0101120:three_prime_UTR
TGTTCTGGAGCCATGTAATT+AGG 0.250797 1_3:-7599091 None:intergenic
ATACAGAGCTAATCCTTTAA+AGG 0.253814 1_3:-7601213 None:intergenic
GAGCTTCTGTTGGATTTATT+GGG 0.274049 1_3:+7600467 Msa0101120:CDS
TAAAGAAACAACCTTTGTTT+TGG 0.297214 1_3:-7596999 None:intergenic
TGCTGAAGTTTCAAAGGTTC+AGG 0.298858 1_3:-7598378 None:intergenic
GGTGTTTATTTATGCATTAA+AGG 0.300816 1_3:+7597406 Msa0101120:five_prime_UTR
TTAGAACGTACTGCAGATTA+TGG 0.302417 1_3:+7600274 Msa0101120:CDS
TCTAGACATTCCTGAATCTA+AGG 0.302873 1_3:-7598241 None:intergenic
GGGCTTAACACATTCTCTTT+TGG 0.303938 1_3:-7600565 None:intergenic
TTTCCAGGGATGGTGAGTTT+TGG 0.309534 1_3:+7600676 Msa0101120:CDS
ATATTCTGCGCGTCTTTAAA+AGG 0.310548 1_3:+7599356 Msa0101120:CDS
CCGAGGGATGGGTGACCTCC+TGG 0.311465 1_3:+7597607 Msa0101120:five_prime_UTR
GTCGATGTATGAATTCTTAT+AGG 0.311891 1_3:-7600331 None:intergenic
TGTTTGGTTGTCAAGTTTCC+AGG 0.313479 1_3:+7600661 Msa0101120:CDS
TAGTCAGTGCTGCCTGATTT+TGG 0.315215 1_3:-7600133 None:intergenic
GTATCTGTTGACTTTCTTGT+TGG 0.318605 1_3:+7597289 Msa0101120:five_prime_UTR
TTCACATGATCCTCTTTGAT+TGG 0.322968 1_3:-7598504 None:intergenic
TCTGCGTGGGCCAGTTTGTT+AGG 0.324940 1_3:+7600542 Msa0101120:CDS
TTTACTTGATATCACTTCAT+AGG 0.337285 1_3:+7597811 Msa0101120:five_prime_UTR
CTGCTACTGGTAGGATTTCA+TGG 0.337558 1_3:+7600623 Msa0101120:CDS
AGTATTACAACCTTAGATTC+AGG 0.360396 1_3:+7598231 Msa0101120:CDS
GAGGACCCTTTGGTGATGTT+TGG 0.361104 1_3:+7598412 Msa0101120:CDS
CCATGGGTTATAATCCTTGT+AGG 0.362031 1_3:-7600946 None:intergenic
AAGGAGTTTCTAGTGTTTGC+TGG 0.368878 1_3:+7598568 Msa0101120:CDS
ATCATATAGGATTTGAGTTC+AGG 0.372845 1_3:+7597434 Msa0101120:five_prime_UTR
ACATCTTAGCAGCAACTTCA+TGG 0.384443 1_3:-7598476 None:intergenic
TTGAAACTTCAGCACCGAAT+TGG 0.395091 1_3:+7598387 Msa0101120:CDS
GAAACGGATTCATGGGGATT+CGG 0.395952 1_3:+7599148 Msa0101120:CDS
ATTCGAATGGCGTCGTAAAA+GGG 0.398237 1_3:+7600591 Msa0101120:CDS
CCTCTCAAAGGATCAACTTC+AGG 0.398972 1_3:+7600168 Msa0101120:CDS
TTGAAACTAGGCATATTAGT+TGG 0.401044 1_3:+7600847 Msa0101120:CDS
TCGATGTATGAATTCTTATA+GGG 0.403661 1_3:-7600330 None:intergenic
CGAATTGGTCGAGGACCCTT+TGG 0.406343 1_3:+7598402 Msa0101120:CDS
GAACAATCGAAATGGAATCT+TGG 0.408065 1_3:-7596977 None:intergenic
TCTACCGTCATTGCGATTGA+TGG 0.408374 1_3:-7600446 None:intergenic
ATATTTACAGCTTTGAAACT+AGG 0.412019 1_3:+7600835 Msa0101120:CDS
TGAAGAGCCAAGCAAAAGAT+TGG 0.413672 1_3:-7599032 None:intergenic
AATCTGCAGTTAAGCGTGTT+TGG 0.415346 1_3:+7597584 Msa0101120:five_prime_UTR
CAGTTAAGCGTGTTTGGCCG+AGG 0.416179 1_3:+7597590 Msa0101120:five_prime_UTR
ATGAAAGTAATTCCAAAATC+AGG 0.416519 1_3:+7600121 Msa0101120:CDS
ATGGCCTGGCAGCTGGTGAT+TGG 0.421439 1_3:+7600371 Msa0101120:CDS
TTATTGGGCTGCAAACTCTC+TGG 0.426673 1_3:+7600482 Msa0101120:CDS
GTGTTTATTTATGCATTAAA+GGG 0.427125 1_3:+7597407 Msa0101120:five_prime_UTR
AGGGGAGGGGCCTCTGCTAC+TGG 0.429138 1_3:+7600610 Msa0101120:CDS
TTGACAACCAAACACCCATT+TGG 0.430784 1_3:-7600652 None:intergenic
ATGCCTAGTACAACTAGAAC+AGG 0.431258 1_3:-7600814 None:intergenic
AATCCATGGACTTGCGCGAT+TGG 0.432685 1_3:-7598352 None:intergenic
TGTCATTTGAAACGGATTCA+TGG 0.434134 1_3:+7599140 Msa0101120:CDS
GGAGGAGGATGGAGATATCA+AGG 0.438936 1_3:+7600094 Msa0101120:CDS
TCTGTTGACTTTCTTGTTGG+TGG 0.439907 1_3:+7597292 Msa0101120:five_prime_UTR
AAGCGTGTTTGGCCGAGGGA+TGG 0.443512 1_3:+7597595 Msa0101120:five_prime_UTR
TGTCCTGTTGGTGAAATATA+CGG 0.443667 1_3:+7599217 Msa0101120:CDS
GATACTACCAAATGGGTGTT+TGG 0.448805 1_3:+7600645 Msa0101120:CDS
TTCCCAAAACTCACCATCCC+TGG 0.449001 1_3:-7600679 None:intergenic
GTCATTTGAAACGGATTCAT+GGG 0.449610 1_3:+7599141 Msa0101120:CDS
TTTGAGGAATCGACCTTCAA+TGG 0.455368 1_3:+7599330 Msa0101120:CDS
GTCACGAATGGCCTGGCAGC+TGG 0.457715 1_3:+7600364 Msa0101120:CDS
TCTAGTGTTTGCTGGTTACA+TGG 0.459137 1_3:+7598576 Msa0101120:CDS
GAAAGTACAGCTGATAGAAT+TGG 0.460485 1_3:-7601094 None:intergenic
TCTCCCATTGAGAATATCCT+TGG 0.462519 1_3:+7599289 Msa0101120:CDS
CAAAGGGTCCTCGACCAATT+CGG 0.467685 1_3:-7598401 None:intergenic
ATTTCATGGATACTACCAAA+TGG 0.474128 1_3:+7600637 Msa0101120:CDS
ATTAAAGGGTAGCATCATAT+AGG 0.474213 1_3:+7597421 Msa0101120:five_prime_UTR
CGAGGGATGGGTGACCTCCT+GGG 0.475664 1_3:+7597608 Msa0101120:five_prime_UTR
AGTGTTAAGTTTATTTGGGG+TGG 0.477588 1_3:+7597864 Msa0101120:five_prime_UTR
GACATAGGGCCTCTGACCTC+TGG 0.481700 1_3:-7599121 None:intergenic
GGTTGTCAAGTTTCCAGGGA+TGG 0.483297 1_3:+7600666 Msa0101120:CDS
GTCTTTCGGGATTGTAAACA+TGG 0.483744 1_3:+7597714 Msa0101120:five_prime_UTR
AAAGGTTCAGGTTCAATCCA+TGG 0.486677 1_3:-7598366 None:intergenic
TCATTAGCTAGTGTTTGAAC+TGG 0.490555 1_3:+7601067 Msa0101120:three_prime_UTR
AGTTGGGAGGCTTTCTGGAT+CGG 0.491406 1_3:-7600204 None:intergenic
AGCGTGTTTGGCCGAGGGAT+GGG 0.492465 1_3:+7597596 Msa0101120:five_prime_UTR
AAGCCAACGACAGTTCCGTC+TGG 0.492923 1_3:-7600253 None:intergenic
AGGCCCTATGTCATTTGAAA+CGG 0.494592 1_3:+7599132 Msa0101120:CDS
GAAGAGCCAAGCAAAAGATT+GGG 0.495194 1_3:-7599031 None:intergenic
AAACCCTTCAGAACTCGAAA+TGG 0.495513 1_3:+7600510 Msa0101120:CDS
AAATTGTATGACGGTTCAAT+TGG 0.497991 1_3:+7598731 Msa0101120:CDS
CTGAATGAACTGGCTAATGA+TGG 0.498348 1_3:+7600073 Msa0101120:CDS
GGTACGCTTGAAAGATGAAA+AGG 0.498765 1_3:+7600393 Msa0101120:CDS
AGACCTGTTCTAGTTGTACT+AGG 0.500576 1_3:+7600811 Msa0101120:CDS
TAACCCATGGCAACACAACA+TGG 0.500752 1_3:+7600959 Msa0101120:CDS
CGACCAATCGCGCAAGTCCA+TGG 0.502376 1_3:+7598349 Msa0101120:CDS
GATCCGTATATTTCACCAAC+AGG 0.502608 1_3:-7599220 None:intergenic
GAGGGGCCTCTGCTACTGGT+AGG 0.503223 1_3:+7600614 Msa0101120:CDS
TGGCCTGGCAGCTGGTGATT+GGG 0.503490 1_3:+7600372 Msa0101120:CDS
ACGTTATTAACATTGAGCTT+AGG 0.503963 1_3:-7598161 None:intergenic
ATGGGAGAAGGAAGGCCACT+TGG 0.504464 1_3:-7599274 None:intergenic
AACTTCAACCTCGGAAGGAT+CGG 0.506263 1_3:-7600719 None:intergenic
TGCACCAAGGATATTCTCAA+TGG 0.506987 1_3:-7599293 None:intergenic
CGCAGAATATCTACCATTGA+AGG 0.507993 1_3:-7599343 None:intergenic
GAATTTCAATGTTAAATGGA+AGG 0.512178 1_3:+7598598 Msa0101120:CDS
TTTCTTGTTGGTGGTTGATG+AGG 0.512270 1_3:+7597301 Msa0101120:five_prime_UTR
TGGCAGGTACGGGATCGATC+TGG 0.512572 1_3:+7598898 Msa0101120:intron
CTCAAAGGATCAACTTCAGG+TGG 0.513886 1_3:+7600171 Msa0101120:CDS
TTATGGATTTGTTCTAGTGA+GGG 0.514209 1_3:+7600291 Msa0101120:CDS
TCAGATATTGCTCAGAGGCT+TGG 0.514336 1_3:+7599064 Msa0101120:CDS
GTTTGGTTGTCAAGTTTCCA+GGG 0.514420 1_3:+7600662 Msa0101120:CDS
TTGATGAGGGAACAAGTGAT+TGG 0.514638 1_3:+7597315 Msa0101120:five_prime_UTR
CAGAAAATTTCAAAGATCAC+AGG 0.514716 1_3:-7598196 None:intergenic
CCAGGAGGTCACCCATCCCT+CGG 0.515557 1_3:-7597607 None:intergenic
ATTGTAAACATGGGTATCAA+TGG 0.516132 1_3:+7597724 Msa0101120:five_prime_UTR
ACACATCACCTCAAAACATC+AGG 0.516904 1_3:-7598794 None:intergenic
CATGGACTTGCGCGATTGGT+CGG 0.519277 1_3:-7598348 None:intergenic
ATGGTTTAAGGTTGAGAACA+AGG 0.524109 1_3:-7598955 None:intergenic
AATTTCAATGTTAAATGGAA+GGG 0.525630 1_3:+7598599 Msa0101120:CDS
TTGCAGGTCACTGAATGAAC+TGG 0.528545 1_3:+7600063 Msa0101120:intron
CGCTTAACTGCAGATTCTGA+TGG 0.530436 1_3:-7597577 None:intergenic
TTTCGATTGTTCCAAAACAA+AGG 0.530834 1_3:+7596988 Msa0101120:five_prime_UTR
TCTGCCATTTCGAGTTCTGA+AGG 0.531466 1_3:-7600514 None:intergenic
GTACCCAATCACCAGCTGCC+AGG 0.532200 1_3:-7600375 None:intergenic
TTTCATGGATACTACCAAAT+GGG 0.532985 1_3:+7600638 Msa0101120:CDS
AGCAAACACTAGAAACTCCT+TGG 0.533146 1_3:-7598566 None:intergenic
TGAACGCGTCACGAATGGCC+TGG 0.537908 1_3:+7600357 Msa0101120:CDS
CACCGAGTGGTTCCTCTCAA+AGG 0.541938 1_3:+7600156 Msa0101120:CDS
CCTTGGTATGGATGTCCTGT+TGG 0.543914 1_3:+7599205 Msa0101120:CDS
ATTATGGATTTGTTCTAGTG+AGG 0.545782 1_3:+7600290 Msa0101120:CDS
AGTTAAGCGTGTTTGGCCGA+GGG 0.548295 1_3:+7597591 Msa0101120:five_prime_UTR
ATTCGGTGCTGAAGTTTCAA+AGG 0.549441 1_3:-7598384 None:intergenic
TTCTTGTTGGTGGTTGATGA+GGG 0.549496 1_3:+7597302 Msa0101120:five_prime_UTR
TACGACGCCATTCGAATCGA+GGG 0.550381 1_3:-7600585 None:intergenic
GAATCCGTTTCAAATGACAT+AGG 0.550959 1_3:-7599136 None:intergenic
TCATTGAGAAGAACATTACA+TGG 0.551201 1_3:-7598974 None:intergenic
GCACCAAGGATATTCTCAAT+GGG 0.552742 1_3:-7599292 None:intergenic
TCTTGGAGAAACAAAGAACT+AGG 0.554643 1_3:-7596960 None:intergenic
TTCGAATGGCGTCGTAAAAG+GGG 0.556323 1_3:+7600592 Msa0101120:CDS
TAGTTGGAAACAAAGTGAAA+AGG 0.558036 1_3:+7600863 Msa0101120:CDS
AACATGTTGAGGATCATCAC+TGG 0.559885 1_3:+7600782 Msa0101120:CDS
AAAATCAACAACTTCAACCT+CGG 0.561609 1_3:-7600728 None:intergenic
ACTGGTAGTCAACCTTGGTA+TGG 0.562801 1_3:+7599193 Msa0101120:CDS
AAAAGGATATTAGCAACTGA+AGG 0.563136 1_3:-7600988 None:intergenic
TGAGATTTGCATGAGTTGGG+AGG 0.563242 1_3:-7600217 None:intergenic
TTGAGTGTTAAGTTTATTTG+GGG 0.563417 1_3:+7597861 Msa0101120:five_prime_UTR
AACCCATGGCAACACAACAT+GGG 0.563805 1_3:+7600960 Msa0101120:CDS
CTGCCATTTCGAGTTCTGAA+GGG 0.564065 1_3:-7600513 None:intergenic
AGCCAACGACAGTTCCGTCT+GGG 0.566135 1_3:-7600252 None:intergenic
GGGCTGCAAACTCTCTGGAA+TGG 0.566139 1_3:+7600487 Msa0101120:CDS
ACTCTTGAACGCGTCACGAA+TGG 0.567776 1_3:+7600352 Msa0101120:CDS
AGGAATGTCTAGAGAAGTCA+TGG 0.568023 1_3:+7598251 Msa0101120:CDS
GTGCAACACAAGGACTTCCC+AGG 0.568792 1_3:-7597625 None:intergenic
GTATTTACATATTTATTCCG+AGG 0.570546 1_3:+7597929 Msa0101120:five_prime_UTR
GTCAAAACAACAGTCCTACA+AGG 0.572453 1_3:+7600932 Msa0101120:CDS
TGGCTAATGATGGAGGAGGA+TGG 0.574319 1_3:+7600083 Msa0101120:CDS
ACCCATGGCAACACAACATG+GGG 0.575393 1_3:+7600961 Msa0101120:CDS
ATTACATGGCTCCAGAACAA+TGG 0.575533 1_3:+7599095 Msa0101120:CDS
TCAACTTCAGGTGGGTGACA+TGG 0.577067 1_3:+7600180 Msa0101120:CDS
AGAAAAGTATCAACATGTTG+AGG 0.578832 1_3:+7600771 Msa0101120:CDS
GTATTTGTTACTTCTTAGAG+TGG 0.581235 1_3:+7597492 Msa0101120:five_prime_UTR
TGCAAGCCAAACATCACCAA+AGG 0.581260 1_3:-7598418 None:intergenic
AGGATATTCTCAATGGGAGA+AGG 0.581766 1_3:-7599286 None:intergenic
TTTGTTCTAGTGAGGGTCCA+CGG 0.582005 1_3:+7600298 Msa0101120:CDS
TGGGAATGAATCAAACACCT+TGG 0.582420 1_3:+7600696 Msa0101120:CDS
TCAACAACTTCAACCTCGGA+AGG 0.582617 1_3:-7600724 None:intergenic
CATTCCATCAATCGCAATGA+CGG 0.585990 1_3:+7600442 Msa0101120:CDS
TGGGAGAAGGAAGGCCACTT+GGG 0.586231 1_3:-7599273 None:intergenic
CGGTTCAATTGGTGACAAGT+TGG 0.586939 1_3:+7598742 Msa0101120:CDS
AATCCGTTTCAAATGACATA+GGG 0.587008 1_3:-7599135 None:intergenic
TTGTTGTTGCTCAGACAACA+AGG 0.587800 1_3:+7598040 Msa0101120:five_prime_UTR
AAGGAAAAGCACTCACCGGT+GGG 0.588053 1_3:+7600412 Msa0101120:CDS
TACGGGATCGATCTGGCTCA+AGG 0.590380 1_3:+7598905 Msa0101120:CDS
ACAAAGTGAAAAGGTGCAAG+AGG 0.591652 1_3:+7600872 Msa0101120:CDS
CACCTTGGCCGATCCTTCCG+AGG 0.592446 1_3:+7600711 Msa0101120:CDS
AACCTCGGAAGGATCGGCCA+AGG 0.594129 1_3:-7600713 None:intergenic
TGGCTAGACTAAGAGATGGA+TGG 0.594983 1_3:+7598762 Msa0101120:CDS
GATGTTACATCCAATCAAAG+AGG 0.595757 1_3:+7598494 Msa0101120:CDS
TTACGACGCCATTCGAATCG+AGG 0.595769 1_3:-7600586 None:intergenic
GCAAGCCAAACATCACCAAA+GGG 0.597883 1_3:-7598417 None:intergenic
GAATTATGCTTGAAGTGCCA+AGG 0.602260 1_3:+7598549 Msa0101120:CDS
CTTCAGCACCGAATTGGTCG+AGG 0.602330 1_3:+7598393 Msa0101120:CDS
GCTTGGAAGTCCTAATTACA+TGG 0.604254 1_3:+7599081 Msa0101120:CDS
ATCATTATGAAATTGTATGA+CGG 0.604681 1_3:+7598722 Msa0101120:CDS
TGTTGACTGGTAGTCAACCT+TGG 0.606529 1_3:+7599188 Msa0101120:CDS
ACCGTTGTTGAAATGTTGAC+TGG 0.606786 1_3:+7599175 Msa0101120:CDS
CCTGAAGTTGATCCTTTGAG+AGG 0.610469 1_3:-7600168 None:intergenic
AATGGCGTCGTAAAAGGGGA+GGG 0.612881 1_3:+7600596 Msa0101120:CDS
GTCCCAGACGGAACTGTCGT+TGG 0.613432 1_3:+7600250 Msa0101120:CDS
TGTTAAGCCCTCGATTCGAA+TGG 0.618387 1_3:+7600578 Msa0101120:CDS
TCATTTGAAACGGATTCATG+GGG 0.622874 1_3:+7599142 Msa0101120:CDS
TGAAAAGGAAAAGCACTCAC+CGG 0.625000 1_3:+7600408 Msa0101120:CDS
ATGGCAGAATCATTCTGCGT+GGG 0.627438 1_3:+7600529 Msa0101120:CDS
AAGTTGGCTAGACTAAGAGA+TGG 0.628842 1_3:+7598758 Msa0101120:CDS
TGAAATCCTACCAGTAGCAG+AGG 0.629390 1_3:-7600620 None:intergenic
AAAGGAAAAGCACTCACCGG+TGG 0.630780 1_3:+7600411 Msa0101120:CDS
ATCCTTTGAGAGGAACCACT+CGG 0.632608 1_3:-7600158 None:intergenic
ATGGCGTCGTAAAAGGGGAG+GGG 0.637421 1_3:+7600597 Msa0101120:CDS
GAATGGCGTCGTAAAAGGGG+AGG 0.641779 1_3:+7600595 Msa0101120:CDS
TATTCTCAATGGGAGAAGGA+AGG 0.642358 1_3:-7599282 None:intergenic
AATGACGGTAGAGCTTCTGT+TGG 0.643785 1_3:+7600457 Msa0101120:CDS
CAATGGAAACCAGAGGTCAG+AGG 0.644185 1_3:+7599112 Msa0101120:CDS
ACATGTTGAGGATCATCACT+GGG 0.644328 1_3:+7600783 Msa0101120:CDS
GAGGGATGAAGTGCAACACA+AGG 0.648511 1_3:-7597635 None:intergenic
TCAAAGGATCAACTTCAGGT+GGG 0.652726 1_3:+7600172 Msa0101120:CDS
ATGGAATGTAGAATCCCCAC+CGG 0.657028 1_3:-7600427 None:intergenic
GAAAAGCTGCATATCCCAAG+TGG 0.662621 1_3:+7599259 Msa0101120:CDS
ACCAGTCAACATTTCAACAA+CGG 0.664981 1_3:-7599176 None:intergenic
CCTACAAGGATTATAACCCA+TGG 0.667895 1_3:+7600946 Msa0101120:CDS
AATGGCAGAATCATTCTGCG+TGG 0.675086 1_3:+7600528 Msa0101120:CDS
TCTTTCGGGATTGTAAACAT+GGG 0.678318 1_3:+7597715 Msa0101120:five_prime_UTR
AATGAACTGGCTAATGATGG+AGG 0.681313 1_3:+7600076 Msa0101120:CDS
CAAAACATGAATGTCCCAGA+CGG 0.682309 1_3:+7600238 Msa0101120:CDS
CCATGGCAACACAACATGGG+GGG 0.686405 1_3:+7600963 Msa0101120:CDS
GTAAACATGGGTATCAATGG+CGG 0.686930 1_3:+7597727 Msa0101120:five_prime_UTR
TTAGCTCAGATATTGCTCAG+AGG 0.694542 1_3:+7599059 Msa0101120:CDS
AGGAAAAGCACTCACCGGTG+GGG 0.698636 1_3:+7600413 Msa0101120:CDS
GAACTGGCTAATGATGGAGG+AGG 0.699870 1_3:+7600079 Msa0101120:CDS
TCCAGAACAATGGAAACCAG+AGG 0.702393 1_3:+7599105 Msa0101120:CDS
CATACTCAAAACATGCACCA+AGG 0.704149 1_3:-7599306 None:intergenic
CCCATGGCAACACAACATGG+GGG 0.707761 1_3:+7600962 Msa0101120:CDS
TTATAGGGTCATGAATACCG+TGG 0.720576 1_3:-7600315 None:intergenic
CCAACAGGACATCCATACCA+AGG 0.725485 1_3:-7599205 None:intergenic
GATAGTGTAGAAACATCACA+TGG 0.731382 1_3:-7597667 None:intergenic
CAACACAAGGACTTCCCAGG+AGG 0.733345 1_3:-7597622 None:intergenic
GCAGCACTGACTACACCGAG+TGG 0.764598 1_3:+7600143 Msa0101120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAAATTCTTTTTTTGA+GGG + chr1_3:7597384-7597403 Msa0101120:five_prime_UTR 10.0%
!! AAAAATACATAATAAAGAAA+AGG - chr1_3:7598091-7598110 None:intergenic 10.0%
!! ATAAATAGATATTAACTAAA+AGG - chr1_3:7599980-7599999 None:intergenic 10.0%
!! TTCAAAATAATGAAAAACAT+TGG - chr1_3:7597137-7597156 None:intergenic 15.0%
!!! CTTAAAAAATTCTTTTTTTG+AGG + chr1_3:7597383-7597402 Msa0101120:five_prime_UTR 15.0%
!!! TAAAAAATTCTTTTTTTGAG+GGG + chr1_3:7597385-7597404 Msa0101120:five_prime_UTR 15.0%
!!! ACTATCTTTTTATTTAAAGA+AGG + chr1_3:7597684-7597703 Msa0101120:five_prime_UTR 15.0%
!!! CTATCTTTTTATTTAAAGAA+GGG + chr1_3:7597685-7597704 Msa0101120:five_prime_UTR 15.0%
!!! TATCTTTTTATTTAAAGAAG+GGG + chr1_3:7597686-7597705 Msa0101120:five_prime_UTR 15.0%
!! AAAAAATAAAATGCAAACAA+AGG - chr1_3:7597754-7597773 None:intergenic 15.0%
!!! TTCTTTATTATGTATTTTTG+TGG + chr1_3:7598092-7598111 Msa0101120:five_prime_UTR 15.0%
!! ACATGTTAAGAATTTAAAAA+TGG + chr1_3:7599823-7599842 Msa0101120:intron 15.0%
!! TCTTTGATAAAAATGAATGA+TGG + chr1_3:7597346-7597365 Msa0101120:five_prime_UTR 20.0%
!! CTTTGATAAAAATGAATGAT+GGG + chr1_3:7597347-7597366 Msa0101120:five_prime_UTR 20.0%
!! GTGTTTATTTATGCATTAAA+GGG + chr1_3:7597407-7597426 Msa0101120:five_prime_UTR 20.0%
!!! ATCTTTTTATTTAAAGAAGG+GGG + chr1_3:7597687-7597706 Msa0101120:five_prime_UTR 20.0%
!!! TTCTTTTGATTATGAGATTT+TGG + chr1_3:7598290-7598309 Msa0101120:CDS 20.0%
!! AATTTCAATGTTAAATGGAA+GGG + chr1_3:7598599-7598618 Msa0101120:CDS 20.0%
!! ATCATTATGAAATTGTATGA+CGG + chr1_3:7598722-7598741 Msa0101120:CDS 20.0%
!!! ATCTTTAACTTATATAGCAT+AGG + chr1_3:7598835-7598854 Msa0101120:intron 20.0%
!!! TCTTTAACTTATATAGCATA+GGG + chr1_3:7598836-7598855 Msa0101120:intron 20.0%
!! ATGCTAAATTAAACAAGAAT+CGG - chr1_3:7599428-7599447 None:intergenic 20.0%
!!! CAAAGATAGAAATATTTTGT+TGG - chr1_3:7599917-7599936 None:intergenic 20.0%
!!! CAACAAAATATTTCTATCTT+TGG + chr1_3:7599915-7599934 Msa0101120:intron 20.0%
!! TGAATAACATTAGTTGAAAA+TGG + chr1_3:7601132-7601151 Msa0101120:three_prime_UTR 20.0%
!! AAGTTGTAAATATCCTTTAA+AGG + chr1_3:7601200-7601219 Msa0101120:three_prime_UTR 20.0%
! AAACTCTCCTTTCTTAAAAT+TGG + chr1_3:7596934-7596953 Msa0101120:five_prime_UTR 25.0%
!!! TAGGAATCCAATTTTAAGAA+AGG - chr1_3:7596944-7596963 None:intergenic 25.0%
!!! TAAAGAAACAACCTTTGTTT+TGG - chr1_3:7597002-7597021 None:intergenic 25.0%
!!! ATTTTTTAAGCAATTGAGAG+AGG - chr1_3:7597373-7597392 None:intergenic 25.0%
! GGTGTTTATTTATGCATTAA+AGG + chr1_3:7597406-7597425 Msa0101120:five_prime_UTR 25.0%
! TTTACTTGATATCACTTCAT+AGG + chr1_3:7597811-7597830 Msa0101120:five_prime_UTR 25.0%
!!! GCTATTGTAGTTTTGATATA+TGG + chr1_3:7597838-7597857 Msa0101120:five_prime_UTR 25.0%
! GTTGAGTGTTAAGTTTATTT+GGG + chr1_3:7597860-7597879 Msa0101120:five_prime_UTR 25.0%
! TTGAGTGTTAAGTTTATTTG+GGG + chr1_3:7597861-7597880 Msa0101120:five_prime_UTR 25.0%
! GTATTTACATATTTATTCCG+AGG + chr1_3:7597929-7597948 Msa0101120:five_prime_UTR 25.0%
!! ATATAACATTTTTCTTGCCT+CGG - chr1_3:7597949-7597968 None:intergenic 25.0%
! TAAGTCAATGAAGATGTATT+TGG + chr1_3:7598016-7598035 Msa0101120:five_prime_UTR 25.0%
! CATGGAATTTCAATGTTAAA+TGG + chr1_3:7598594-7598613 Msa0101120:CDS 25.0%
! GAATTTCAATGTTAAATGGA+AGG + chr1_3:7598598-7598617 Msa0101120:CDS 25.0%
! GTGCATTTATTTCAATGTAT+AGG + chr1_3:7598635-7598654 Msa0101120:intron 25.0%
! AAAATTACTGGTCAATACTA+AGG + chr1_3:7598859-7598878 Msa0101120:intron 25.0%
! TTTCAATTATCACTTCACAT+TGG + chr1_3:7599459-7599478 Msa0101120:intron 25.0%
!!! CTTATTGATTTAGTTCTTTC+AGG - chr1_3:7599733-7599752 None:intergenic 25.0%
!!! CATGGTTATCTTTTTAGTTA+GGG + chr1_3:7599775-7599794 Msa0101120:intron 25.0%
! ATGAAAGTAATTCCAAAATC+AGG + chr1_3:7600121-7600140 Msa0101120:CDS 25.0%
! TCGATGTATGAATTCTTATA+GGG - chr1_3:7600333-7600352 None:intergenic 25.0%
!!! TTGATTTTAACACTTGTACT+GGG + chr1_3:7600743-7600762 Msa0101120:CDS 25.0%
!!! ATATTTACAGCTTTGAAACT+AGG + chr1_3:7600835-7600854 Msa0101120:CDS 25.0%
!!! GCTAATATCCTTTTTAAAGA+TGG + chr1_3:7600997-7601016 Msa0101120:CDS 25.0%
!!! TTGTTTTGGAACAATCGAAA+TGG - chr1_3:7596988-7597007 None:intergenic 30.0%
TTTCGATTGTTCCAAAACAA+AGG + chr1_3:7596988-7597007 Msa0101120:five_prime_UTR 30.0%
ATTAAAGGGTAGCATCATAT+AGG + chr1_3:7597421-7597440 Msa0101120:five_prime_UTR 30.0%
! ATCATATAGGATTTGAGTTC+AGG + chr1_3:7597434-7597453 Msa0101120:five_prime_UTR 30.0%
! GTATTTGTTACTTCTTAGAG+TGG + chr1_3:7597492-7597511 Msa0101120:five_prime_UTR 30.0%
AAACATCACATGGCAAAAAA+TGG - chr1_3:7597660-7597679 None:intergenic 30.0%
ATTGTAAACATGGGTATCAA+TGG + chr1_3:7597724-7597743 Msa0101120:five_prime_UTR 30.0%
GGTTGAGTGTTAAGTTTATT+TGG + chr1_3:7597859-7597878 Msa0101120:five_prime_UTR 30.0%
ACGTTATTAACATTGAGCTT+AGG - chr1_3:7598164-7598183 None:intergenic 30.0%
CAGAAAATTTCAAAGATCAC+AGG - chr1_3:7598199-7598218 None:intergenic 30.0%
AGTATTACAACCTTAGATTC+AGG + chr1_3:7598231-7598250 Msa0101120:CDS 30.0%
TTAAATGGAAGGGTTAGATT+TGG + chr1_3:7598609-7598628 Msa0101120:intron 30.0%
TAGCTTGATAGAAGTCAAAA+GGG - chr1_3:7598674-7598693 None:intergenic 30.0%
! TTAGCTTGATAGAAGTCAAA+AGG - chr1_3:7598675-7598694 None:intergenic 30.0%
AAATTGTATGACGGTTCAAT+TGG + chr1_3:7598731-7598750 Msa0101120:CDS 30.0%
TATAGCATAGGGAAAATTAC+TGG + chr1_3:7598847-7598866 Msa0101120:intron 30.0%
GAAGAACATTACATGGTTTA+AGG - chr1_3:7598970-7598989 None:intergenic 30.0%
TCATTGAGAAGAACATTACA+TGG - chr1_3:7598977-7598996 None:intergenic 30.0%
AATCCGTTTCAAATGACATA+GGG - chr1_3:7599138-7599157 None:intergenic 30.0%
!! CATGTTTTGAGTATGATTTG+AGG + chr1_3:7599314-7599333 Msa0101120:CDS 30.0%
TCGGCATCAGAAAAAAAAAA+TGG - chr1_3:7599409-7599428 None:intergenic 30.0%
TTATGATCATGACCGATTAT+TGG + chr1_3:7599543-7599562 Msa0101120:intron 30.0%
ATTCCTGTGATGTATTATCT+TGG + chr1_3:7599661-7599680 Msa0101120:intron 30.0%
TTCCTGTGATGTATTATCTT+GGG + chr1_3:7599662-7599681 Msa0101120:intron 30.0%
!!! GCATGGTTATCTTTTTAGTT+AGG + chr1_3:7599774-7599793 Msa0101120:intron 30.0%
!!! TTTTGAGATTTGCATGAGTT+GGG - chr1_3:7600223-7600242 None:intergenic 30.0%
! ATTATGGATTTGTTCTAGTG+AGG + chr1_3:7600290-7600309 Msa0101120:CDS 30.0%
! TTATGGATTTGTTCTAGTGA+GGG + chr1_3:7600291-7600310 Msa0101120:CDS 30.0%
GTCGATGTATGAATTCTTAT+AGG - chr1_3:7600334-7600353 None:intergenic 30.0%
ATTTCATGGATACTACCAAA+TGG + chr1_3:7600637-7600656 Msa0101120:CDS 30.0%
TTTCATGGATACTACCAAAT+GGG + chr1_3:7600638-7600657 Msa0101120:CDS 30.0%
AAAATCAACAACTTCAACCT+CGG - chr1_3:7600731-7600750 None:intergenic 30.0%
!! GTTGATTTTAACACTTGTAC+TGG + chr1_3:7600742-7600761 Msa0101120:CDS 30.0%
!! AGAAAAGTATCAACATGTTG+AGG + chr1_3:7600771-7600790 Msa0101120:CDS 30.0%
TTGAAACTAGGCATATTAGT+TGG + chr1_3:7600847-7600866 Msa0101120:CDS 30.0%
TAGTTGGAAACAAAGTGAAA+AGG + chr1_3:7600863-7600882 Msa0101120:CDS 30.0%
AGCAAAAACCAATATGTTGA+AGG + chr1_3:7600910-7600929 Msa0101120:CDS 30.0%
!!! TGTTTTGACCTTCAACATAT+TGG - chr1_3:7600921-7600940 None:intergenic 30.0%
AAAAGGATATTAGCAACTGA+AGG - chr1_3:7600991-7601010 None:intergenic 30.0%
! GTTAAGCACCATCTTTAAAA+AGG - chr1_3:7601008-7601027 None:intergenic 30.0%
ATACAGAGCTAATCCTTTAA+AGG - chr1_3:7601216-7601235 None:intergenic 30.0%
TCTTGGAGAAACAAAGAACT+AGG - chr1_3:7596963-7596982 None:intergenic 35.0%
GAACAATCGAAATGGAATCT+TGG - chr1_3:7596980-7596999 None:intergenic 35.0%
!! GTATCTGTTGACTTTCTTGT+TGG + chr1_3:7597289-7597308 Msa0101120:five_prime_UTR 35.0%
ATCACATGGCAAAAAATGGA+GGG - chr1_3:7597656-7597675 None:intergenic 35.0%
GATAGTGTAGAAACATCACA+TGG - chr1_3:7597670-7597689 None:intergenic 35.0%
TCTTTCGGGATTGTAAACAT+GGG + chr1_3:7597715-7597734 Msa0101120:five_prime_UTR 35.0%
AGTGTTAAGTTTATTTGGGG+TGG + chr1_3:7597864-7597883 Msa0101120:five_prime_UTR 35.0%
TCTAGACATTCCTGAATCTA+AGG - chr1_3:7598244-7598263 None:intergenic 35.0%
GATGTTACATCCAATCAAAG+AGG + chr1_3:7598494-7598513 Msa0101120:CDS 35.0%
TTCACATGATCCTCTTTGAT+TGG - chr1_3:7598507-7598526 None:intergenic 35.0%
! TCTCATTACCTGATGTTTTG+AGG + chr1_3:7598786-7598805 Msa0101120:CDS 35.0%
!!! ATTTTAGAGCTTCACGCTAA+AGG + chr1_3:7598929-7598948 Msa0101120:CDS 35.0%
!!! TTTTAGAGCTTCACGCTAAA+GGG + chr1_3:7598930-7598949 Msa0101120:CDS 35.0%
! ATGGTTTAAGGTTGAGAACA+AGG - chr1_3:7598958-7598977 None:intergenic 35.0%
GAATCCGTTTCAAATGACAT+AGG - chr1_3:7599139-7599158 None:intergenic 35.0%
! TGTCATTTGAAACGGATTCA+TGG + chr1_3:7599140-7599159 Msa0101120:CDS 35.0%
! GTCATTTGAAACGGATTCAT+GGG + chr1_3:7599141-7599160 Msa0101120:CDS 35.0%
! TCATTTGAAACGGATTCATG+GGG + chr1_3:7599142-7599161 Msa0101120:CDS 35.0%
ACCAGTCAACATTTCAACAA+CGG - chr1_3:7599179-7599198 None:intergenic 35.0%
! TGTCCTGTTGGTGAAATATA+CGG + chr1_3:7599217-7599236 Msa0101120:CDS 35.0%
ATATTCTGCGCGTCTTTAAA+AGG + chr1_3:7599356-7599375 Msa0101120:CDS 35.0%
TCCTGTGAATATTCCAAGAT+TGG + chr1_3:7599580-7599599 Msa0101120:intron 35.0%
CCTGTGAATATTCCAAGATT+GGG + chr1_3:7599581-7599600 Msa0101120:intron 35.0%
TGAATATTCCAAGATTGGGT+AGG + chr1_3:7599585-7599604 Msa0101120:intron 35.0%
AGGAATACAGCTAATCTAGA+AGG - chr1_3:7599647-7599666 None:intergenic 35.0%
TTCCCAAGATAATACATCAC+AGG - chr1_3:7599667-7599686 None:intergenic 35.0%
!!! CTTGGGAAGTGTTTACATTT+TGG + chr1_3:7599679-7599698 Msa0101120:intron 35.0%
ATTCTTAACATGTGCCATGA+GGG - chr1_3:7599816-7599835 None:intergenic 35.0%
AATTCTTAACATGTGCCATG+AGG - chr1_3:7599817-7599836 None:intergenic 35.0%
!! CTTCTTAACTTGTGCCTTAA+GGG + chr1_3:7599938-7599957 Msa0101120:intron 35.0%
AATGTTATCTTGTGCCCTTA+AGG - chr1_3:7599955-7599974 None:intergenic 35.0%
!!! GTTTTGAGATTTGCATGAGT+TGG - chr1_3:7600224-7600243 None:intergenic 35.0%
TTAGAACGTACTGCAGATTA+TGG + chr1_3:7600274-7600293 Msa0101120:CDS 35.0%
AGAGCTTCTGTTGGATTTAT+TGG + chr1_3:7600466-7600485 Msa0101120:CDS 35.0%
GAGCTTCTGTTGGATTTATT+GGG + chr1_3:7600467-7600486 Msa0101120:CDS 35.0%
! TTTTAACACTTGTACTGGGA+TGG + chr1_3:7600747-7600766 Msa0101120:CDS 35.0%
TCATTAGCTAGTGTTTGAAC+TGG + chr1_3:7601067-7601086 Msa0101120:three_prime_UTR 35.0%
! GAAAGTACAGCTGATAGAAT+TGG - chr1_3:7601097-7601116 None:intergenic 35.0%
!! TCTGTTGACTTTCTTGTTGG+TGG + chr1_3:7597292-7597311 Msa0101120:five_prime_UTR 40.0%
!! TTTCTTGTTGGTGGTTGATG+AGG + chr1_3:7597301-7597320 Msa0101120:five_prime_UTR 40.0%
!! TTCTTGTTGGTGGTTGATGA+GGG + chr1_3:7597302-7597321 Msa0101120:five_prime_UTR 40.0%
TTGATGAGGGAACAAGTGAT+TGG + chr1_3:7597315-7597334 Msa0101120:five_prime_UTR 40.0%
AATCTGCAGTTAAGCGTGTT+TGG + chr1_3:7597584-7597603 Msa0101120:five_prime_UTR 40.0%
CATCACATGGCAAAAAATGG+AGG - chr1_3:7597657-7597676 None:intergenic 40.0%
AAGAAGGGGGAAATGTCTTT+CGG + chr1_3:7597700-7597719 Msa0101120:five_prime_UTR 40.0%
GTCTTTCGGGATTGTAAACA+TGG + chr1_3:7597714-7597733 Msa0101120:five_prime_UTR 40.0%
GTAAACATGGGTATCAATGG+CGG + chr1_3:7597727-7597746 Msa0101120:five_prime_UTR 40.0%
! TTGTTGTTGCTCAGACAACA+AGG + chr1_3:7598040-7598059 Msa0101120:five_prime_UTR 40.0%
AGGAATGTCTAGAGAAGTCA+TGG + chr1_3:7598251-7598270 Msa0101120:CDS 40.0%
! AAAGGTTCAGGTTCAATCCA+TGG - chr1_3:7598369-7598388 None:intergenic 40.0%
TGCTGAAGTTTCAAAGGTTC+AGG - chr1_3:7598381-7598400 None:intergenic 40.0%
!! ATTCGGTGCTGAAGTTTCAA+AGG - chr1_3:7598387-7598406 None:intergenic 40.0%
! TTGAAACTTCAGCACCGAAT+TGG + chr1_3:7598387-7598406 Msa0101120:CDS 40.0%
ACATCTTAGCAGCAACTTCA+TGG - chr1_3:7598479-7598498 None:intergenic 40.0%
! GAATTATGCTTGAAGTGCCA+AGG + chr1_3:7598549-7598568 Msa0101120:CDS 40.0%
AGCAAACACTAGAAACTCCT+TGG - chr1_3:7598569-7598588 None:intergenic 40.0%
!! AAGGAGTTTCTAGTGTTTGC+TGG + chr1_3:7598568-7598587 Msa0101120:CDS 40.0%
! TCTAGTGTTTGCTGGTTACA+TGG + chr1_3:7598576-7598595 Msa0101120:CDS 40.0%
AAGTTGGCTAGACTAAGAGA+TGG + chr1_3:7598758-7598777 Msa0101120:CDS 40.0%
ACACATCACCTCAAAACATC+AGG - chr1_3:7598797-7598816 None:intergenic 40.0%
GGTCAATACTAAGGATGTGT+TGG + chr1_3:7598868-7598887 Msa0101120:intron 40.0%
! AAGGATGTGTTGGTCGTTAA+TGG + chr1_3:7598878-7598897 Msa0101120:intron 40.0%
! TGACAACGATCAAGCGATTT+TGG + chr1_3:7598994-7599013 Msa0101120:CDS 40.0%
! GACAACGATCAAGCGATTTT+GGG + chr1_3:7598995-7599014 Msa0101120:CDS 40.0%
! GGTATTCCCAATCTTTTGCT+TGG + chr1_3:7599025-7599044 Msa0101120:CDS 40.0%
GAAGAGCCAAGCAAAAGATT+GGG - chr1_3:7599034-7599053 None:intergenic 40.0%
TGAAGAGCCAAGCAAAAGAT+TGG - chr1_3:7599035-7599054 None:intergenic 40.0%
TTAGCTCAGATATTGCTCAG+AGG + chr1_3:7599059-7599078 Msa0101120:CDS 40.0%
GCTTGGAAGTCCTAATTACA+TGG + chr1_3:7599081-7599100 Msa0101120:CDS 40.0%
!! TGTTCTGGAGCCATGTAATT+AGG - chr1_3:7599094-7599113 None:intergenic 40.0%
ATTACATGGCTCCAGAACAA+TGG + chr1_3:7599095-7599114 Msa0101120:CDS 40.0%
! AGGCCCTATGTCATTTGAAA+CGG + chr1_3:7599132-7599151 Msa0101120:CDS 40.0%
ACCGTTGTTGAAATGTTGAC+TGG + chr1_3:7599175-7599194 Msa0101120:CDS 40.0%
GATCCGTATATTTCACCAAC+AGG - chr1_3:7599223-7599242 None:intergenic 40.0%
TATTCTCAATGGGAGAAGGA+AGG - chr1_3:7599285-7599304 None:intergenic 40.0%
AGGATATTCTCAATGGGAGA+AGG - chr1_3:7599289-7599308 None:intergenic 40.0%
TCTCCCATTGAGAATATCCT+TGG + chr1_3:7599289-7599308 Msa0101120:CDS 40.0%
GCACCAAGGATATTCTCAAT+GGG - chr1_3:7599295-7599314 None:intergenic 40.0%
TGCACCAAGGATATTCTCAA+TGG - chr1_3:7599296-7599315 None:intergenic 40.0%
CATACTCAAAACATGCACCA+AGG - chr1_3:7599309-7599328 None:intergenic 40.0%
TTTGAGGAATCGACCTTCAA+TGG + chr1_3:7599330-7599349 Msa0101120:CDS 40.0%
CGCAGAATATCTACCATTGA+AGG - chr1_3:7599346-7599365 None:intergenic 40.0%
GGTACAGGTTCACCAATAAT+CGG - chr1_3:7599558-7599577 None:intergenic 40.0%
AATATTCACAGGACAGGTAC+AGG - chr1_3:7599573-7599592 None:intergenic 40.0%
TCTTGGAATATTCACAGGAC+AGG - chr1_3:7599579-7599598 None:intergenic 40.0%
CCCAATCTTGGAATATTCAC+AGG - chr1_3:7599584-7599603 None:intergenic 40.0%
TTCAGGTACAGACATTATCC+TGG - chr1_3:7599716-7599735 None:intergenic 40.0%
!! GCTTCTTAACTTGTGCCTTA+AGG + chr1_3:7599937-7599956 Msa0101120:intron 40.0%
ATTCATTCTGCCTATGTTGC+AGG + chr1_3:7600047-7600066 Msa0101120:intron 40.0%
CTGAATGAACTGGCTAATGA+TGG + chr1_3:7600073-7600092 Msa0101120:CDS 40.0%
AATGAACTGGCTAATGATGG+AGG + chr1_3:7600076-7600095 Msa0101120:CDS 40.0%
TCAAAGGATCAACTTCAGGT+GGG + chr1_3:7600172-7600191 Msa0101120:CDS 40.0%
CAAAACATGAATGTCCCAGA+CGG + chr1_3:7600238-7600257 Msa0101120:CDS 40.0%
TTATAGGGTCATGAATACCG+TGG - chr1_3:7600318-7600337 None:intergenic 40.0%
GGTACGCTTGAAAGATGAAA+AGG + chr1_3:7600393-7600412 Msa0101120:CDS 40.0%
!! TGAAAAGGAAAAGCACTCAC+CGG + chr1_3:7600408-7600427 Msa0101120:CDS 40.0%
CATTCCATCAATCGCAATGA+CGG + chr1_3:7600442-7600461 Msa0101120:CDS 40.0%
AAACCCTTCAGAACTCGAAA+TGG + chr1_3:7600510-7600529 Msa0101120:CDS 40.0%
! TCTCTTTTGGCCTAACAAAC+TGG - chr1_3:7600555-7600574 None:intergenic 40.0%
! GGGCTTAACACATTCTCTTT+TGG - chr1_3:7600568-7600587 None:intergenic 40.0%
ATTCGAATGGCGTCGTAAAA+GGG + chr1_3:7600591-7600610 Msa0101120:CDS 40.0%
GATACTACCAAATGGGTGTT+TGG + chr1_3:7600645-7600664 Msa0101120:CDS 40.0%
TTGACAACCAAACACCCATT+TGG - chr1_3:7600655-7600674 None:intergenic 40.0%
TGTTTGGTTGTCAAGTTTCC+AGG + chr1_3:7600661-7600680 Msa0101120:CDS 40.0%
GTTTGGTTGTCAAGTTTCCA+GGG + chr1_3:7600662-7600681 Msa0101120:CDS 40.0%
TGGGAATGAATCAAACACCT+TGG + chr1_3:7600696-7600715 Msa0101120:CDS 40.0%
AACATGTTGAGGATCATCAC+TGG + chr1_3:7600782-7600801 Msa0101120:CDS 40.0%
ACATGTTGAGGATCATCACT+GGG + chr1_3:7600783-7600802 Msa0101120:CDS 40.0%
! AGACCTGTTCTAGTTGTACT+AGG + chr1_3:7600811-7600830 Msa0101120:CDS 40.0%
ATGCCTAGTACAACTAGAAC+AGG - chr1_3:7600817-7600836 None:intergenic 40.0%
! ACAAAGTGAAAAGGTGCAAG+AGG + chr1_3:7600872-7600891 Msa0101120:CDS 40.0%
GTCAAAACAACAGTCCTACA+AGG + chr1_3:7600932-7600951 Msa0101120:CDS 40.0%
! CCATGGGTTATAATCCTTGT+AGG - chr1_3:7600949-7600968 None:intergenic 40.0%
CCTACAAGGATTATAACCCA+TGG + chr1_3:7600946-7600965 Msa0101120:CDS 40.0%
CGCTTAACTGCAGATTCTGA+TGG - chr1_3:7597580-7597599 None:intergenic 45.0%
AGAAGGGGGAAATGTCTTTC+GGG + chr1_3:7597701-7597720 Msa0101120:five_prime_UTR 45.0%
! TCGGAACAGCAGCAGTTTTA+GGG - chr1_3:7598332-7598351 None:intergenic 45.0%
GCAAGCCAAACATCACCAAA+GGG - chr1_3:7598420-7598439 None:intergenic 45.0%
TGCAAGCCAAACATCACCAA+AGG - chr1_3:7598421-7598440 None:intergenic 45.0%
! CGGTTCAATTGGTGACAAGT+TGG + chr1_3:7598742-7598761 Msa0101120:CDS 45.0%
TGGCTAGACTAAGAGATGGA+TGG + chr1_3:7598762-7598781 Msa0101120:CDS 45.0%
! ATGTGTTGGTCGTTAATGGC+AGG + chr1_3:7598882-7598901 Msa0101120:intron 45.0%
TTGGTCGTTAATGGCAGGTA+CGG + chr1_3:7598887-7598906 Msa0101120:intron 45.0%
TCAGATATTGCTCAGAGGCT+TGG + chr1_3:7599064-7599083 Msa0101120:CDS 45.0%
TCCAGAACAATGGAAACCAG+AGG + chr1_3:7599105-7599124 Msa0101120:CDS 45.0%
! ACCTCTGGTTTCCATTGTTC+TGG - chr1_3:7599109-7599128 None:intergenic 45.0%
! GAAACGGATTCATGGGGATT+CGG + chr1_3:7599148-7599167 Msa0101120:CDS 45.0%
! TGTTGACTGGTAGTCAACCT+TGG + chr1_3:7599188-7599207 Msa0101120:CDS 45.0%
ACTGGTAGTCAACCTTGGTA+TGG + chr1_3:7599193-7599212 Msa0101120:CDS 45.0%
GAAAAGCTGCATATCCCAAG+TGG + chr1_3:7599259-7599278 Msa0101120:CDS 45.0%
ACAACAGACCTACCCAATCT+TGG - chr1_3:7599596-7599615 None:intergenic 45.0%
AGATTGGGTAGGTCTGTTGT+AGG + chr1_3:7599596-7599615 Msa0101120:intron 45.0%
TGTTGTAGGACTAGAGCTCA+AGG + chr1_3:7599610-7599629 Msa0101120:intron 45.0%
!!! ATTTTGGCTTCCTCTGATCC+AGG + chr1_3:7599695-7599714 Msa0101120:intron 45.0%
CAGACATTATCCTGGATCAG+AGG - chr1_3:7599708-7599727 None:intergenic 45.0%
!! AGTGTTAACTTGTGCCCTCA+TGG + chr1_3:7599799-7599818 Msa0101120:intron 45.0%
CATTCAGTGACCTGCAACAT+AGG - chr1_3:7600060-7600079 None:intergenic 45.0%
TTGCAGGTCACTGAATGAAC+TGG + chr1_3:7600063-7600082 Msa0101120:intron 45.0%
! TAGTCAGTGCTGCCTGATTT+TGG - chr1_3:7600136-7600155 None:intergenic 45.0%
! ATCCTTTGAGAGGAACCACT+CGG - chr1_3:7600161-7600180 None:intergenic 45.0%
! CCTGAAGTTGATCCTTTGAG+AGG - chr1_3:7600171-7600190 None:intergenic 45.0%
CCTCTCAAAGGATCAACTTC+AGG + chr1_3:7600168-7600187 Msa0101120:CDS 45.0%
CTCAAAGGATCAACTTCAGG+TGG + chr1_3:7600171-7600190 Msa0101120:CDS 45.0%
! TGAGATTTGCATGAGTTGGG+AGG - chr1_3:7600220-7600239 None:intergenic 45.0%
TTTGTTCTAGTGAGGGTCCA+CGG + chr1_3:7600298-7600317 Msa0101120:CDS 45.0%
ATGGAATGTAGAATCCCCAC+CGG - chr1_3:7600430-7600449 None:intergenic 45.0%
TCTACCGTCATTGCGATTGA+TGG - chr1_3:7600449-7600468 None:intergenic 45.0%
AATGACGGTAGAGCTTCTGT+TGG + chr1_3:7600457-7600476 Msa0101120:CDS 45.0%
TTATTGGGCTGCAAACTCTC+TGG + chr1_3:7600482-7600501 Msa0101120:CDS 45.0%
!! CTGCCATTTCGAGTTCTGAA+GGG - chr1_3:7600516-7600535 None:intergenic 45.0%
!! TCTGCCATTTCGAGTTCTGA+AGG - chr1_3:7600517-7600536 None:intergenic 45.0%
AATGGCAGAATCATTCTGCG+TGG + chr1_3:7600528-7600547 Msa0101120:CDS 45.0%
ATGGCAGAATCATTCTGCGT+GGG + chr1_3:7600529-7600548 Msa0101120:CDS 45.0%
! TGTTAAGCCCTCGATTCGAA+TGG + chr1_3:7600578-7600597 Msa0101120:CDS 45.0%
GATTCGAATGGCGTCGTAAA+AGG + chr1_3:7600590-7600609 Msa0101120:CDS 45.0%
TTCGAATGGCGTCGTAAAAG+GGG + chr1_3:7600592-7600611 Msa0101120:CDS 45.0%
TGAAATCCTACCAGTAGCAG+AGG - chr1_3:7600623-7600642 None:intergenic 45.0%
CTGCTACTGGTAGGATTTCA+TGG + chr1_3:7600623-7600642 Msa0101120:CDS 45.0%
! TTTCCAGGGATGGTGAGTTT+TGG + chr1_3:7600676-7600695 Msa0101120:CDS 45.0%
! TTCCAGGGATGGTGAGTTTT+GGG + chr1_3:7600677-7600696 Msa0101120:CDS 45.0%
AACTTCAACCTCGGAAGGAT+CGG - chr1_3:7600722-7600741 None:intergenic 45.0%
TCAACAACTTCAACCTCGGA+AGG - chr1_3:7600727-7600746 None:intergenic 45.0%
TAACCCATGGCAACACAACA+TGG + chr1_3:7600959-7600978 Msa0101120:CDS 45.0%
AACCCATGGCAACACAACAT+GGG + chr1_3:7600960-7600979 Msa0101120:CDS 45.0%
AGTTAAGCGTGTTTGGCCGA+GGG + chr1_3:7597591-7597610 Msa0101120:five_prime_UTR 50.0%
GAGGGATGAAGTGCAACACA+AGG - chr1_3:7597638-7597657 None:intergenic 50.0%
!!! AGCAGCAGTTTTAGGGACGT+CGG - chr1_3:7598325-7598344 None:intergenic 50.0%
! GTCGGAACAGCAGCAGTTTT+AGG - chr1_3:7598333-7598352 None:intergenic 50.0%
AATCCATGGACTTGCGCGAT+TGG - chr1_3:7598355-7598374 None:intergenic 50.0%
CAAAGGGTCCTCGACCAATT+CGG - chr1_3:7598404-7598423 None:intergenic 50.0%
!! GAGGACCCTTTGGTGATGTT+TGG + chr1_3:7598412-7598431 Msa0101120:CDS 50.0%
TGGTCGTTAATGGCAGGTAC+GGG + chr1_3:7598888-7598907 Msa0101120:intron 50.0%
!! CAAGCGATTTTGGGAGACGT+TGG + chr1_3:7599004-7599023 Msa0101120:CDS 50.0%
CAATGGAAACCAGAGGTCAG+AGG + chr1_3:7599112-7599131 Msa0101120:CDS 50.0%
CCAACAGGACATCCATACCA+AGG - chr1_3:7599208-7599227 None:intergenic 50.0%
CCTTGGTATGGATGTCCTGT+TGG + chr1_3:7599205-7599224 Msa0101120:CDS 50.0%
AAGCTGTTTGTGCACGAGCA+TGG + chr1_3:7599757-7599776 Msa0101120:intron 50.0%
! GAACTGGCTAATGATGGAGG+AGG + chr1_3:7600079-7600098 Msa0101120:CDS 50.0%
! TGGCTAATGATGGAGGAGGA+TGG + chr1_3:7600083-7600102 Msa0101120:CDS 50.0%
GGAGGAGGATGGAGATATCA+AGG + chr1_3:7600094-7600113 Msa0101120:CDS 50.0%
TCAACTTCAGGTGGGTGACA+TGG + chr1_3:7600180-7600199 Msa0101120:CDS 50.0%
AGTTGGGAGGCTTTCTGGAT+CGG - chr1_3:7600207-7600226 None:intergenic 50.0%
ACTCTTGAACGCGTCACGAA+TGG + chr1_3:7600352-7600371 Msa0101120:CDS 50.0%
!! AAAGGAAAAGCACTCACCGG+TGG + chr1_3:7600411-7600430 Msa0101120:CDS 50.0%
!! AAGGAAAAGCACTCACCGGT+GGG + chr1_3:7600412-7600431 Msa0101120:CDS 50.0%
TACGACGCCATTCGAATCGA+GGG - chr1_3:7600588-7600607 None:intergenic 50.0%
TTACGACGCCATTCGAATCG+AGG - chr1_3:7600589-7600608 None:intergenic 50.0%
AATGGCGTCGTAAAAGGGGA+GGG + chr1_3:7600596-7600615 Msa0101120:CDS 50.0%
GGTTGTCAAGTTTCCAGGGA+TGG + chr1_3:7600666-7600685 Msa0101120:CDS 50.0%
TTCCCAAAACTCACCATCCC+TGG - chr1_3:7600682-7600701 None:intergenic 50.0%
ACCCATGGCAACACAACATG+GGG + chr1_3:7600961-7600980 Msa0101120:CDS 50.0%
CAGTTAAGCGTGTTTGGCCG+AGG + chr1_3:7597590-7597609 Msa0101120:five_prime_UTR 55.0%
CAACACAAGGACTTCCCAGG+AGG - chr1_3:7597625-7597644 None:intergenic 55.0%
GTGCAACACAAGGACTTCCC+AGG - chr1_3:7597628-7597647 None:intergenic 55.0%
CATGGACTTGCGCGATTGGT+CGG - chr1_3:7598351-7598370 None:intergenic 55.0%
! CTTCAGCACCGAATTGGTCG+AGG + chr1_3:7598393-7598412 Msa0101120:CDS 55.0%
CGAATTGGTCGAGGACCCTT+TGG + chr1_3:7598402-7598421 Msa0101120:CDS 55.0%
! TACGGGATCGATCTGGCTCA+AGG + chr1_3:7598905-7598924 Msa0101120:CDS 55.0%
TGGGAGAAGGAAGGCCACTT+GGG - chr1_3:7599276-7599295 None:intergenic 55.0%
ATGGGAGAAGGAAGGCCACT+TGG - chr1_3:7599277-7599296 None:intergenic 55.0%
CACCGAGTGGTTCCTCTCAA+AGG + chr1_3:7600156-7600175 Msa0101120:CDS 55.0%
! GCATGAGTTGGGAGGCTTTC+TGG - chr1_3:7600212-7600231 None:intergenic 55.0%
AGCCAACGACAGTTCCGTCT+GGG - chr1_3:7600255-7600274 None:intergenic 55.0%
AAGCCAACGACAGTTCCGTC+TGG - chr1_3:7600256-7600275 None:intergenic 55.0%
!! AGGAAAAGCACTCACCGGTG+GGG + chr1_3:7600413-7600432 Msa0101120:CDS 55.0%
! GGGCTGCAAACTCTCTGGAA+TGG + chr1_3:7600487-7600506 Msa0101120:CDS 55.0%
! TCTGCGTGGGCCAGTTTGTT+AGG + chr1_3:7600542-7600561 Msa0101120:CDS 55.0%
GAATGGCGTCGTAAAAGGGG+AGG + chr1_3:7600595-7600614 Msa0101120:CDS 55.0%
ATGGCGTCGTAAAAGGGGAG+GGG + chr1_3:7600597-7600616 Msa0101120:CDS 55.0%
CCCCCATGTTGTGTTGCCAT+GGG - chr1_3:7600965-7600984 None:intergenic 55.0%
CCCATGGCAACACAACATGG+GGG + chr1_3:7600962-7600981 Msa0101120:CDS 55.0%
CCATGGCAACACAACATGGG+GGG + chr1_3:7600963-7600982 Msa0101120:CDS 55.0%
AAGCGTGTTTGGCCGAGGGA+TGG + chr1_3:7597595-7597614 Msa0101120:five_prime_UTR 60.0%
AGCGTGTTTGGCCGAGGGAT+GGG + chr1_3:7597596-7597615 Msa0101120:five_prime_UTR 60.0%
CGACCAATCGCGCAAGTCCA+TGG + chr1_3:7598349-7598368 Msa0101120:CDS 60.0%
TGGCAGGTACGGGATCGATC+TGG + chr1_3:7598898-7598917 Msa0101120:intron 60.0%
GACATAGGGCCTCTGACCTC+TGG - chr1_3:7599124-7599143 None:intergenic 60.0%
!! GCAGCACTGACTACACCGAG+TGG + chr1_3:7600143-7600162 Msa0101120:CDS 60.0%
GTCCCAGACGGAACTGTCGT+TGG + chr1_3:7600250-7600269 Msa0101120:CDS 60.0%
TGAACGCGTCACGAATGGCC+TGG + chr1_3:7600357-7600376 Msa0101120:CDS 60.0%
ATGGCCTGGCAGCTGGTGAT+TGG + chr1_3:7600371-7600390 Msa0101120:CDS 60.0%
TGGCCTGGCAGCTGGTGATT+GGG + chr1_3:7600372-7600391 Msa0101120:CDS 60.0%
GTACCCAATCACCAGCTGCC+AGG - chr1_3:7600378-7600397 None:intergenic 60.0%
AACCTCGGAAGGATCGGCCA+AGG - chr1_3:7600716-7600735 None:intergenic 60.0%
CCCCCCATGTTGTGTTGCCA+TGG - chr1_3:7600966-7600985 None:intergenic 60.0%
CCAGGAGGTCACCCATCCCT+CGG - chr1_3:7597610-7597629 None:intergenic 65.0%
CGAGGGATGGGTGACCTCCT+GGG + chr1_3:7597608-7597627 Msa0101120:five_prime_UTR 65.0%
GTCACGAATGGCCTGGCAGC+TGG + chr1_3:7600364-7600383 Msa0101120:CDS 65.0%
GAGGGGCCTCTGCTACTGGT+AGG + chr1_3:7600614-7600633 Msa0101120:CDS 65.0%
CACCTTGGCCGATCCTTCCG+AGG + chr1_3:7600711-7600730 Msa0101120:CDS 65.0%
CCGAGGGATGGGTGACCTCC+TGG + chr1_3:7597607-7597626 Msa0101120:five_prime_UTR 70.0%
AGGGGAGGGGCCTCTGCTAC+TGG + chr1_3:7600610-7600629 Msa0101120:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 7596933 7601290 7596933 ID=Msa0101120;Name=Msa0101120
chr1_3 mRNA 7596933 7601290 7596933 ID=Msa0101120-mRNA-1;Parent=Msa0101120;Name=Msa0101120-mRNA-1;_AED=0.02;_eAED=0.02;_QI=1295|1|1|1|1|1|4|264|638
chr1_3 exon 7596933 7598620 7596933 ID=Msa0101120-mRNA-1:exon:3004;Parent=Msa0101120-mRNA-1
chr1_3 exon 7598716 7598807 7598716 ID=Msa0101120-mRNA-1:exon:3005;Parent=Msa0101120-mRNA-1
chr1_3 exon 7598904 7599377 7598904 ID=Msa0101120-mRNA-1:exon:3006;Parent=Msa0101120-mRNA-1
chr1_3 exon 7600069 7601290 7600069 ID=Msa0101120-mRNA-1:exon:3007;Parent=Msa0101120-mRNA-1
chr1_3 five_prime_UTR 7596933 7598227 7596933 ID=Msa0101120-mRNA-1:five_prime_utr;Parent=Msa0101120-mRNA-1
chr1_3 CDS 7598228 7598620 7598228 ID=Msa0101120-mRNA-1:cds;Parent=Msa0101120-mRNA-1
chr1_3 CDS 7598716 7598807 7598716 ID=Msa0101120-mRNA-1:cds;Parent=Msa0101120-mRNA-1
chr1_3 CDS 7598904 7599377 7598904 ID=Msa0101120-mRNA-1:cds;Parent=Msa0101120-mRNA-1
chr1_3 CDS 7600069 7601026 7600069 ID=Msa0101120-mRNA-1:cds;Parent=Msa0101120-mRNA-1
chr1_3 three_prime_UTR 7601027 7601290 7601027 ID=Msa0101120-mRNA-1:three_prime_utr;Parent=Msa0101120-mRNA-1
Gene Sequence

>Msa0101120

ATGAGTATTACAACCTTAGATTCAGGAATGTCTAGAGAAGTCATGGCTTCTTCATCAGCTGCTTCTTTTGATTATGAGATTTTGGATAAAGATACCGACGTCCCTAAAACTGCTGCTGTTCCGACCAATCGCGCAAGTCCATGGATTGAACCTGAACCTTTGAAACTTCAGCACCGAATTGGTCGAGGACCCTTTGGTGATGTTTGGCTTGCAACTCTTCATCAGTCAACTGAAGATTATGATGAGCACCATGAAGTTGCTGCTAAGATGTTACATCCAATCAAAGAGGATCATGTGAAGATTGTATTGAAGAAATTCAATGAATTATGCTTGAAGTGCCAAGGAGTTTCTAGTGTTTGCTGGTTACATGGAATTTCAATGTTAAATGGAAGGATCTGCATCATTATGAAATTGTATGACGGTTCAATTGGTGACAAGTTGGCTAGACTAAGAGATGGATGGATCTCATTACCTGATGTTTTGAGGTACGGGATCGATCTGGCTCAAGGCATTTTAGAGCTTCACGCTAAAGGGATCCTTGTTCTCAACCTTAAACCATGTAATGTTCTTCTCAATGACAACGATCAAGCGATTTTGGGAGACGTTGGTATTCCCAATCTTTTGCTTGGCTCTTCATTCGTTAGCTCAGATATTGCTCAGAGGCTTGGAAGTCCTAATTACATGGCTCCAGAACAATGGAAACCAGAGGTCAGAGGCCCTATGTCATTTGAAACGGATTCATGGGGATTCGGATGCACCGTTGTTGAAATGTTGACTGGTAGTCAACCTTGGTATGGATGTCCTGTTGGTGAAATATACGGATCAGTTGTCGAAAAGCATGAAAAGCTGCATATCCCAAGTGGCCTTCCTTCTCCCATTGAGAATATCCTTGGTGCATGTTTTGAGTATGATTTGAGGAATCGACCTTCAATGGTAGATATTCTGCGCGTCTTTAAAAGGTCACTGAATGAACTGGCTAATGATGGAGGAGGATGGAGATATCAAGGAAACATGAAAGTAATTCCAAAATCAGGCAGCACTGACTACACCGAGTGGTTCCTCTCAAAGGATCAACTTCAGGTGGGTGACATGGTCCGATCCAGAAAGCCTCCCAACTCATGCAAATCTCAAAACATGAATGTCCCAGACGGAACTGTCGTTGGCTTAGAACGTACTGCAGATTATGGATTTGTTCTAGTGAGGGTCCACGGTATTCATGACCCTATAAGAATTCATACATCGACTCTTGAACGCGTCACGAATGGCCTGGCAGCTGGTGATTGGGTACGCTTGAAAGATGAAAAGGAAAAGCACTCACCGGTGGGGATTCTACATTCCATCAATCGCAATGACGGTAGAGCTTCTGTTGGATTTATTGGGCTGCAAACTCTCTGGAATGGAAACCCTTCAGAACTCGAAATGGCAGAATCATTCTGCGTGGGCCAGTTTGTTAGGCCAAAAGAGAATGTGTTAAGCCCTCGATTCGAATGGCGTCGTAAAAGGGGAGGGGCCTCTGCTACTGGTAGGATTTCATGGATACTACCAAATGGGTGTTTGGTTGTCAAGTTTCCAGGGATGGTGAGTTTTGGGAATGAATCAAACACCTTGGCCGATCCTTCCGAGGTTGAAGTTGTTGATTTTAACACTTGTACTGGGATGGTAGAAAAGTATCAACATGTTGAGGATCATCACTGGGCTGTAAGACCTGTTCTAGTTGTACTAGGCATATTTACAGCTTTGAAACTAGGCATATTAGTTGGAAACAAAGTGAAAAGGTGCAAGAGGTTCAATGCAAAAGAAAGCAAAAACCAATATGTTGAAGGTCAAAACAACAGTCCTACAAGGATTATAACCCATGGCAACACAACATGGGGGGTTCCTTCAGTTGCTAATATCCTTTTTAAAGATGGTGCTTAA
Protein sequence

>Msa0101120

MSITTLDSGMSREVMASSSAASFDYEILDKDTDVPKTAAVPTNRASPWIEPEPLKLQHRIGRGPFGDVWLATLHQSTEDYDEHHEVAAKMLHPIKEDHVKIVLKKFNELCLKCQGVSSVCWLHGISMLNGRICIIMKLYDGSIGDKLARLRDGWISLPDVLRYGIDLAQGILELHAKGILVLNLKPCNVLLNDNDQAILGDVGIPNLLLGSSFVSSDIAQRLGSPNYMAPEQWKPEVRGPMSFETDSWGFGCTVVEMLTGSQPWYGCPVGEIYGSVVEKHEKLHIPSGLPSPIENILGACFEYDLRNRPSMVDILRVFKRSLNELANDGGGWRYQGNMKVIPKSGSTDYTEWFLSKDQLQVGDMVRSRKPPNSCKSQNMNVPDGTVVGLERTADYGFVLVRVHGIHDPIRIHTSTLERVTNGLAAGDWVRLKDEKEKHSPVGILHSINRNDGRASVGFIGLQTLWNGNPSELEMAESFCVGQFVRPKENVLSPRFEWRRKRGGASATGRISWILPNGCLVVKFPGMVSFGNESNTLADPSEVEVVDFNTCTGMVEKYQHVEDHHWAVRPVLVVLGIFTALKLGILVGNKVKRCKRFNAKESKNQYVEGQNNSPTRIITHGNTTWGVPSVANILFKDGA*