Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250830 | XP_039682983.1 | 82.609 | 69 | 12 | 0 | 138 | 206 | 1 | 69 | 3.48e-31 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250830 | A0A072UBY5 | 82.609 | 69 | 12 | 0 | 138 | 206 | 1 | 69 | 1.66e-31 | 130 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0163960 | Msa0250830 | 0.800991 | 1.111595e-48 | -8.615850e-47 |
| Msa0250830 | Msa0518480 | 0.801245 | 9.863007e-49 | -8.615850e-47 |
| Msa0250830 | Msa1031530 | 0.804906 | 1.725339e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0250830 | MtrunA17_Chr7g0219411 | 66.667 | 69 | 23 | 0 | 138 | 206 | 1 | 69 | 3.07e-29 | 104 |
| Msa0250830 | MtrunA17_Chr4g0021711 | 85.106 | 47 | 7 | 0 | 138 | 184 | 1 | 47 | 1.76e-23 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 178 sgRNAs with CRISPR-Local
Find 458 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTAGCTTCTAAGATTT+TGG | 0.089717 | 2_2:+39909802 | None:intergenic |
| TGGGAACCTGTCACCTTTAA+TGG | 0.138871 | 2_2:-39916220 | Msa0250830:CDS |
| GGTGAGTAGCTTACAATTTC+TGG | 0.155113 | 2_2:-39911887 | Msa0250830:three_prime_UTR |
| CAGTGATAAGCAGGGAATTT+TGG | 0.157767 | 2_2:+39913772 | None:intergenic |
| CAGAGATGACTTTCCATTAA+AGG | 0.174666 | 2_2:+39916207 | None:intergenic |
| CTTCTCAGATATGCATATTC+TGG | 0.176517 | 2_2:-39913243 | Msa0250830:three_prime_UTR |
| GGTTAATAATATTTGATTAA+AGG | 0.189723 | 2_2:-39911510 | Msa0250830:three_prime_UTR |
| AAGAGCTTTAGTGGGGTTTC+AGG | 0.191873 | 2_2:-39909752 | Msa0250830:three_prime_UTR |
| GATTTAGATGTTTGGAAAAT+TGG | 0.193115 | 2_2:-39914083 | Msa0250830:CDS |
| AAATGGATGAACTTTGTTTC+TGG | 0.193232 | 2_2:-39913182 | Msa0250830:three_prime_UTR |
| TTGTAACCTGTACGAGATTA+AGG | 0.197325 | 2_2:-39909985 | Msa0250830:three_prime_UTR |
| CTTAGTTTGATTGTGTTATT+TGG | 0.200672 | 2_2:-39911955 | Msa0250830:three_prime_UTR |
| AATTTCAAGTTTGAACCTTT+TGG | 0.225491 | 2_2:+39916169 | None:intergenic |
| ATTAAATGAATAATGAAATT+TGG | 0.229133 | 2_2:-39911914 | Msa0250830:three_prime_UTR |
| TCAATTCCAAATATATAAAA+TGG | 0.243734 | 2_2:+39912379 | None:intergenic |
| GCGCAGTAGTGGTTCTGTTT+TGG | 0.247233 | 2_2:-39910028 | Msa0250830:three_prime_UTR |
| TGTTTGGAAAATTGGCTTTA+GGG | 0.250881 | 2_2:-39914075 | Msa0250830:CDS |
| AATTTCTGGAACACATTTAC+TGG | 0.256969 | 2_2:+39909713 | None:intergenic |
| AACTAACTCAACCTAATTTC+TGG | 0.257754 | 2_2:+39909699 | None:intergenic |
| AAATGGTGTCTTGGCATTAA+AGG | 0.268839 | 2_2:-39910069 | Msa0250830:three_prime_UTR |
| TTAATGCCAAGACACCATTT+TGG | 0.269941 | 2_2:+39910072 | None:intergenic |
| TATAATAACAAAATAGAAAT+AGG | 0.274155 | 2_2:+39911786 | None:intergenic |
| ATGTTTGGAAAATTGGCTTT+AGG | 0.279632 | 2_2:-39914076 | Msa0250830:CDS |
| GGTAAGAACAGTAGTTAATA+TGG | 0.285239 | 2_2:+39912476 | None:intergenic |
| CTTCATCAACATATTTGATT+TGG | 0.290460 | 2_2:-39911385 | Msa0250830:three_prime_UTR |
| GTTGGCTAATCAAATACTTT+AGG | 0.291016 | 2_2:-39911597 | Msa0250830:three_prime_UTR |
| TGATCGGATCTGAAGAAATT+TGG | 0.299468 | 2_2:+39917412 | None:intergenic |
| GTAAATGTGTTCCAGAAATT+AGG | 0.303899 | 2_2:-39909710 | Msa0250830:three_prime_UTR |
| TCTTGGATCAATTAAACTTA+AGG | 0.316742 | 2_2:-39912509 | Msa0250830:three_prime_UTR |
| GAAAGAAGGAAGAGGGGATT+AGG | 0.322092 | 2_2:+39911219 | None:intergenic |
| CCTGCTGGTTCGGTTTGGAT+TGG | 0.329253 | 2_2:-39909848 | Msa0250830:three_prime_UTR |
| AAAGGCTGGGGAGTATCTTC+TGG | 0.335547 | 2_2:-39910051 | Msa0250830:three_prime_UTR |
| TGATAATGGTGCTGGTACTA+TGG | 0.338989 | 2_2:-39912302 | Msa0250830:three_prime_UTR |
| CTGTATCAAGGACTTGAAAA+AGG | 0.339743 | 2_2:-39914105 | Msa0250830:CDS |
| GGTTTCAGGGGAAGTACTTA+TGG | 0.344510 | 2_2:-39909738 | Msa0250830:three_prime_UTR |
| GTACTCTTTCTCATCAGTTT+AGG | 0.349525 | 2_2:-39911543 | Msa0250830:three_prime_UTR |
| GGCTGAAAACTAATATTTGT+TGG | 0.352326 | 2_2:-39916240 | Msa0250830:CDS |
| CTGCTGGTTCGGTTTGGATT+GGG | 0.352784 | 2_2:-39909847 | Msa0250830:three_prime_UTR |
| ACTGCAGCTGCCTGCTGGTT+CGG | 0.353666 | 2_2:-39909858 | Msa0250830:three_prime_UTR |
| CTGCTACTGCAGCTGCCTGC+TGG | 0.358312 | 2_2:-39909863 | Msa0250830:three_prime_UTR |
| GCGGTTCTGTCATAGGCTGC+TGG | 0.363105 | 2_2:-39909933 | Msa0250830:three_prime_UTR |
| AATGACATTGGAACCCAAAA+TGG | 0.366644 | 2_2:-39910086 | Msa0250830:three_prime_UTR |
| TCTCATCAGTTTAGGCAGTC+TGG | 0.370253 | 2_2:-39911535 | Msa0250830:three_prime_UTR |
| TTTGTTTCTGGTGTCAATAC+TGG | 0.370901 | 2_2:-39913170 | Msa0250830:intron |
| CTTCTAACAAAATTTAAGAT+AGG | 0.377485 | 2_2:-39911444 | Msa0250830:three_prime_UTR |
| CATCAACATATTTGATTTGG+TGG | 0.379546 | 2_2:-39911382 | Msa0250830:three_prime_UTR |
| TATGGTTGCGGTTCTGTCAT+AGG | 0.380625 | 2_2:-39909940 | Msa0250830:three_prime_UTR |
| GGTGTTCGGATCCGAATTGC+AGG | 0.381075 | 2_2:-39917375 | Msa0250830:CDS |
| GCTGAAAACTAATATTTGTT+GGG | 0.385254 | 2_2:-39916239 | Msa0250830:CDS |
| AATTTAAGATAGGATAATAA+TGG | 0.406302 | 2_2:-39911434 | Msa0250830:three_prime_UTR |
| CCTCCGGTTCCATTCAATAT+CGG | 0.406977 | 2_2:-39915334 | Msa0250830:CDS |
| AGCTGCCTGCTGGTTCGGTT+TGG | 0.407311 | 2_2:-39909853 | Msa0250830:three_prime_UTR |
| CAAATACTTTAGGTAATTTG+TGG | 0.407492 | 2_2:-39911587 | Msa0250830:three_prime_UTR |
| CACTGCTGCTGCTATGGTTG+CGG | 0.417407 | 2_2:-39909952 | Msa0250830:three_prime_UTR |
| GCTTTAGGGTTCTTGACTCA+TGG | 0.426117 | 2_2:-39914061 | Msa0250830:CDS |
| CAGCTTAGTGAAGTCTATCT+AGG | 0.426267 | 2_2:-39910137 | Msa0250830:three_prime_UTR |
| AAAGATGATGATTGTACAAA+GGG | 0.427910 | 2_2:-39909671 | Msa0250830:three_prime_UTR |
| AAAACTAATAAGAGCTTTAG+TGG | 0.428509 | 2_2:-39909761 | Msa0250830:three_prime_UTR |
| AAACATGTCTTTACCTTCAC+TGG | 0.428858 | 2_2:+39912532 | None:intergenic |
| ATGTAGAGAAAGAAGGAAGA+GGG | 0.432023 | 2_2:+39911212 | None:intergenic |
| TGAGAGAAACAAGGTTGAAA+TGG | 0.432547 | 2_2:-39913199 | Msa0250830:three_prime_UTR |
| TGCTTCCGTATATGTGATAA+TGG | 0.435779 | 2_2:-39912316 | Msa0250830:three_prime_UTR |
| TGTAACCTGTACGAGATTAA+GGG | 0.438382 | 2_2:-39909984 | Msa0250830:three_prime_UTR |
| TCCCACTGTTCAGTTTCCTC+CGG | 0.438726 | 2_2:-39915350 | Msa0250830:CDS |
| GACTTTCCATTAAAGGTGAC+AGG | 0.439058 | 2_2:+39916214 | None:intergenic |
| TTGTTGCACTGCTGCTGCTA+TGG | 0.445565 | 2_2:-39909958 | Msa0250830:three_prime_UTR |
| TGGTGCTACCATCGTACTAC+TGG | 0.447891 | 2_2:-39911867 | Msa0250830:three_prime_UTR |
| GTCTATCTAGGTTGAAGATT+CGG | 0.448770 | 2_2:-39910125 | Msa0250830:three_prime_UTR |
| TTTAAAGCATTTAGAGCCTC+CGG | 0.448817 | 2_2:+39912559 | None:intergenic |
| ATTAGGAGAGATGAGGATGC+AGG | 0.450351 | 2_2:+39911236 | None:intergenic |
| CAGCACCATTATCACATATA+CGG | 0.450722 | 2_2:+39912311 | None:intergenic |
| ATAATACCCCTTTGTCGAGT+TGG | 0.456900 | 2_2:-39911615 | Msa0250830:three_prime_UTR |
| TTATCAGTTCTATCTCTAGC+AGG | 0.457808 | 2_2:-39909895 | Msa0250830:three_prime_UTR |
| ATAATAATGGAGAGCATTTG+AGG | 0.459348 | 2_2:-39911421 | Msa0250830:three_prime_UTR |
| CTTTCTGCACAGTGATAAGC+AGG | 0.461406 | 2_2:+39913763 | None:intergenic |
| TGATTAGCCAACTCGACAAA+GGG | 0.461418 | 2_2:+39911608 | None:intergenic |
| ATGGTTTATCAGTCGGTGTT+CGG | 0.462009 | 2_2:-39917389 | Msa0250830:CDS |
| TCTGCAAAAGCCCTGCAATT+CGG | 0.462765 | 2_2:+39917364 | None:intergenic |
| TATAGGTTTCGCAATGTCTA+GGG | 0.463080 | 2_2:-39914135 | Msa0250830:intron |
| ATATAGGTTTCGCAATGTCT+AGG | 0.464426 | 2_2:-39914136 | Msa0250830:intron |
| AACATATATTTATATCCAAA+AGG | 0.465851 | 2_2:-39916184 | Msa0250830:CDS |
| GACGAGGAACCGAGCCGCAC+AGG | 0.466288 | 2_2:+39915299 | None:intergenic |
| ATATATTATGATGTCATTTG+AGG | 0.466764 | 2_2:+39909634 | None:intergenic |
| AAACTAATAAGAGCTTTAGT+GGG | 0.469296 | 2_2:-39909760 | Msa0250830:three_prime_UTR |
| GAAGAATATGCAGTTGAAAC+CGG | 0.469596 | 2_2:-39912578 | Msa0250830:three_prime_UTR |
| AGAGCTTTAGTGGGGTTTCA+GGG | 0.470768 | 2_2:-39909751 | Msa0250830:three_prime_UTR |
| ATTTCTTCAGATCCGATCAA+TGG | 0.470777 | 2_2:-39917408 | Msa0250830:CDS |
| TATATTATGATGTCATTTGA+GGG | 0.471894 | 2_2:+39909635 | None:intergenic |
| CAATTAAACTTAAGGTTGGT+GGG | 0.474151 | 2_2:-39912501 | Msa0250830:three_prime_UTR |
| CACTCATCAGTCATCATCTT+AGG | 0.479757 | 2_2:+39916362 | None:intergenic |
| TCCTCGTCGTCGTTGTTCCA+AGG | 0.479776 | 2_2:-39915284 | Msa0250830:intron |
| CGACACATGGAGCTAATCAT+TGG | 0.479988 | 2_2:-39914014 | Msa0250830:CDS |
| AGAGAAAATGTAGAGAAAGA+AGG | 0.480203 | 2_2:+39911205 | None:intergenic |
| ATGCCGATATTGAATGGAAC+CGG | 0.484927 | 2_2:+39915331 | None:intergenic |
| GGTGTCTTGGCATTAAAGGC+TGG | 0.485262 | 2_2:-39910065 | Msa0250830:three_prime_UTR |
| GGATCAATTAAACTTAAGGT+TGG | 0.488542 | 2_2:-39912505 | Msa0250830:three_prime_UTR |
| GGCATTGCAAGATTTCCAAC+AGG | 0.489684 | 2_2:-39913706 | Msa0250830:intron |
| TTCAACCTTGTTTCTCTCAA+CGG | 0.490268 | 2_2:+39913203 | None:intergenic |
| TCAATTAAACTTAAGGTTGG+TGG | 0.492549 | 2_2:-39912502 | Msa0250830:three_prime_UTR |
| ATGAAGCTTACGAACAACTT+TGG | 0.494255 | 2_2:+39912432 | None:intergenic |
| GTGTCTTGGCATTAAAGGCT+GGG | 0.494462 | 2_2:-39910064 | Msa0250830:three_prime_UTR |
| AAGGCTGGGGAGTATCTTCT+GGG | 0.495935 | 2_2:-39910050 | Msa0250830:three_prime_UTR |
| CGGTTCTGTCATAGGCTGCT+GGG | 0.496371 | 2_2:-39909932 | Msa0250830:three_prime_UTR |
| ACGCTCGTTGTTGTCGGTGG+TGG | 0.497194 | 2_2:-39917330 | Msa0250830:intron |
| TGAGAAAGAGTACAATCAAA+GGG | 0.503064 | 2_2:+39911553 | None:intergenic |
| TGTAGAGAAAGAAGGAAGAG+GGG | 0.507527 | 2_2:+39911213 | None:intergenic |
| AAGCAAGTGACTTAAAGAAC+AGG | 0.507803 | 2_2:+39911345 | None:intergenic |
| AGAAGGACGCTCGTTGTTGT+CGG | 0.512035 | 2_2:-39917336 | Msa0250830:CDS |
| TGGAACCCAAAATGGTGTCT+TGG | 0.514856 | 2_2:-39910078 | Msa0250830:three_prime_UTR |
| ATTTGATTTGGTGGCATCTG+AGG | 0.515209 | 2_2:-39911373 | Msa0250830:three_prime_UTR |
| TTGAAACATTCATAGTGAGT+TGG | 0.516711 | 2_2:+39912190 | None:intergenic |
| CTGAGAATGCCGATATTGAA+TGG | 0.523258 | 2_2:+39915325 | None:intergenic |
| TGCTTTAAAATTGCCAGTGA+AGG | 0.523281 | 2_2:-39912545 | Msa0250830:three_prime_UTR |
| CTCTTAATCACTACCTGTAG+TGG | 0.526284 | 2_2:+39911139 | None:intergenic |
| TCTCAGCATCCTGTGCGGCT+CGG | 0.526298 | 2_2:-39915308 | Msa0250830:CDS |
| ATGAGAAAGAGTACAATCAA+AGG | 0.526627 | 2_2:+39911552 | None:intergenic |
| GAGGTCTCTGTACCGAGTTA+TGG | 0.527320 | 2_2:+39913850 | None:intergenic |
| GCTAATCATTGGTGATTCAA+AGG | 0.527417 | 2_2:-39914003 | Msa0250830:intron |
| GTATCTTCTGGGCGCAGTAG+TGG | 0.528252 | 2_2:-39910039 | Msa0250830:three_prime_UTR |
| AATGTAGAGAAAGAAGGAAG+AGG | 0.534398 | 2_2:+39911211 | None:intergenic |
| GGTTCGGTTTGGATTGGGTG+AGG | 0.535543 | 2_2:-39909842 | Msa0250830:three_prime_UTR |
| GTAAGAACAGTAGTTAATAT+GGG | 0.538345 | 2_2:+39912477 | None:intergenic |
| CGTATATGTGATAATGGTGC+TGG | 0.542969 | 2_2:-39912310 | Msa0250830:three_prime_UTR |
| GATGAGCTTAGTTCCACTAC+AGG | 0.544143 | 2_2:-39911152 | Msa0250830:three_prime_UTR |
| GGTACAGAGACCTCGAGCAT+TGG | 0.546760 | 2_2:-39913841 | Msa0250830:CDS |
| AAACTCCCTTAATCTCGTAC+AGG | 0.553197 | 2_2:+39909979 | None:intergenic |
| GCAACTCTTGACTCTGACCA+AGG | 0.553633 | 2_2:+39916384 | None:intergenic |
| ACAACAAAATATGAGTGTCC+TGG | 0.555139 | 2_2:+39912148 | None:intergenic |
| TAATAATGGAGAGCATTTGA+GGG | 0.556820 | 2_2:-39911420 | Msa0250830:three_prime_UTR |
| GAACTGTTTGCAACATTCAG+TGG | 0.559836 | 2_2:-39912280 | Msa0250830:three_prime_UTR |
| TTGAGTTATATAAGACCTCA+AGG | 0.561119 | 2_2:+39912083 | None:intergenic |
| TTTAATTGGCAAAATTGGAG+AGG | 0.568114 | 2_2:-39911677 | Msa0250830:three_prime_UTR |
| GAGCATTTGAGGGTAAAGCT+TGG | 0.573864 | 2_2:-39911410 | Msa0250830:three_prime_UTR |
| TTGATTAGCCAACTCGACAA+AGG | 0.573941 | 2_2:+39911607 | None:intergenic |
| AGAGGGGATTAGGAGAGATG+AGG | 0.577716 | 2_2:+39911229 | None:intergenic |
| CCAATCCAAACCGAACCAGC+AGG | 0.580535 | 2_2:+39909848 | None:intergenic |
| CCGATCAATGGTTTATCAGT+CGG | 0.583654 | 2_2:-39917396 | Msa0250830:CDS |
| ATAACTCAATTTGCTGTGTG+CGG | 0.583665 | 2_2:-39912069 | Msa0250830:three_prime_UTR |
| ATCAGTTTAGGCAGTCTGGA+TGG | 0.585517 | 2_2:-39911531 | Msa0250830:three_prime_UTR |
| TAGGGGCTACGACTGTATCA+AGG | 0.585963 | 2_2:-39914117 | Msa0250830:CDS |
| AATTAAACTTAAGGTTGGTG+GGG | 0.590975 | 2_2:-39912500 | Msa0250830:three_prime_UTR |
| ACCGCGTTCATGCCATAACT+CGG | 0.593421 | 2_2:-39913862 | Msa0250830:CDS |
| AACTAATAAGAGCTTTAGTG+GGG | 0.594689 | 2_2:-39909759 | Msa0250830:three_prime_UTR |
| GTTTGTGCTATGAATGACAT+TGG | 0.594834 | 2_2:-39910098 | Msa0250830:three_prime_UTR |
| GAAAGATGATGATTGTACAA+AGG | 0.600429 | 2_2:-39909672 | Msa0250830:three_prime_UTR |
| AGGACGCTCGTTGTTGTCGG+TGG | 0.600958 | 2_2:-39917333 | Msa0250830:CDS |
| ACAAGCACAACAGCAGAGGT+TGG | 0.601407 | 2_2:-39911115 | Msa0250830:three_prime_UTR |
| ACCGGAGGAAACTGAACAGT+GGG | 0.602263 | 2_2:+39915349 | None:intergenic |
| GCTACCATCGTACTACTGGA+TGG | 0.602267 | 2_2:-39911863 | Msa0250830:three_prime_UTR |
| TAGCAATGGCAACCGACACA+TGG | 0.611701 | 2_2:-39914027 | Msa0250830:CDS |
| GAGCTTTAGTGGGGTTTCAG+GGG | 0.615676 | 2_2:-39909750 | Msa0250830:three_prime_UTR |
| TGTCTTGGCATTAAAGGCTG+GGG | 0.617967 | 2_2:-39910063 | Msa0250830:three_prime_UTR |
| GTGTTCGGATCCGAATTGCA+GGG | 0.625439 | 2_2:-39917374 | Msa0250830:CDS |
| TGAATCATAGGTCTAAACCT+TGG | 0.626233 | 2_2:-39916401 | Msa0250830:intron |
| GAGCACAAGCACAACAGCAG+AGG | 0.626684 | 2_2:-39911119 | Msa0250830:three_prime_UTR |
| CCGACTGATAAACCATTGAT+CGG | 0.626884 | 2_2:+39917396 | None:intergenic |
| TGGATTGTTACTGCTAGCAA+TGG | 0.630364 | 2_2:-39914041 | Msa0250830:CDS |
| ACCTTGGAACAACGACGACG+AGG | 0.635088 | 2_2:+39915283 | None:intergenic |
| TGAATAATGAAATTTGGTGA+AGG | 0.646200 | 2_2:-39911908 | Msa0250830:three_prime_UTR |
| ATAGGTTTCGCAATGTCTAG+GGG | 0.649484 | 2_2:-39914134 | Msa0250830:intron |
| CAATGATTAGCTCCATGTGT+CGG | 0.649597 | 2_2:+39914015 | None:intergenic |
| GAATATGCAGTTGAAACCGG+AGG | 0.661513 | 2_2:-39912575 | Msa0250830:three_prime_UTR |
| CAAAACCGTTGAGAGAAACA+AGG | 0.662480 | 2_2:-39913208 | Msa0250830:three_prime_UTR |
| CCGATATTGAATGGAACCGG+AGG | 0.662893 | 2_2:+39915334 | None:intergenic |
| CAACAGCAGAGGTTGGACAA+AGG | 0.669306 | 2_2:-39911108 | Msa0250830:intron |
| TTGGTCGAAAATAGCAACGT+CGG | 0.670089 | 2_2:+39917431 | None:intergenic |
| ACCGAGTTATGGCATGAACG+CGG | 0.671436 | 2_2:+39913861 | None:intergenic |
| TTCTGTCATAGGCTGCTGGG+AGG | 0.680278 | 2_2:-39909929 | Msa0250830:three_prime_UTR |
| TCAATGACATCCAATGCTCG+AGG | 0.681246 | 2_2:+39913831 | None:intergenic |
| GTGTGAAGTATCCACCGACT+TGG | 0.686822 | 2_2:-39916261 | Msa0250830:intron |
| TTGTCCATCCAGTAGTACGA+TGG | 0.689124 | 2_2:+39911859 | None:intergenic |
| GATTAGCCAACTCGACAAAG+GGG | 0.690422 | 2_2:+39911609 | None:intergenic |
| GAGAAAGAGTACAATCAAAG+GGG | 0.703482 | 2_2:+39911554 | None:intergenic |
| TGTCATTCATAGCACAAACA+CGG | 0.704196 | 2_2:+39910102 | None:intergenic |
| AACCGGAGGAAACTGAACAG+TGG | 0.730525 | 2_2:+39915348 | None:intergenic |
| GGCATTCTCAGCATCCTGTG+CGG | 0.731992 | 2_2:-39915313 | Msa0250830:CDS |
| TTTCTGCACAGTGATAAGCA+GGG | 0.744531 | 2_2:+39913764 | None:intergenic |
| AGGATGCAGGAAGTACACAG+AGG | 0.766444 | 2_2:+39911249 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAAAAAAAAAAAAT+TGG | - | chr2_2:39912775-39912794 | Msa0250830:intron | 0.0% |
| !! | AAATTTGATGTATAAATATA+TGG | - | chr2_2:39909909-39909928 | Msa0250830:three_prime_UTR | 10.0% |
| !!! | TTTTATTTTTTTATGTATGT+TGG | - | chr2_2:39912060-39912079 | Msa0250830:three_prime_UTR | 10.0% |
| !! | ATTAAATGAATAATGAAATT+TGG | - | chr2_2:39915110-39915129 | Msa0250830:intron | 10.0% |
| !! | TATAATAACAAAATAGAAAT+AGG | + | chr2_2:39915241-39915260 | None:intergenic | 10.0% |
| !!! | AAAAGTAAAATTTTGAATTA+TGG | + | chr2_2:39915706-39915725 | None:intergenic | 10.0% |
| !!! | TCTAAGATTTAAATGTATAA+GGG | + | chr2_2:39910131-39910150 | None:intergenic | 15.0% |
| !!! | TTCTAAGATTTAAATGTATA+AGG | + | chr2_2:39910132-39910151 | None:intergenic | 15.0% |
| !!! | GTCAAATTTATCTTAATTTT+TGG | - | chr2_2:39910389-39910408 | Msa0250830:intron | 15.0% |
| !! | AAAGAGTTTATATAACTTAA+TGG | - | chr2_2:39910519-39910538 | Msa0250830:intron | 15.0% |
| !! | AAAACTATAATTGACAATTA+AGG | + | chr2_2:39910726-39910745 | None:intergenic | 15.0% |
| !! | AACATATATTTATATCCAAA+AGG | - | chr2_2:39910840-39910859 | Msa0250830:intron | 15.0% |
| !!! | ATACTTTTGTGATATAATTT+TGG | - | chr2_2:39911049-39911068 | Msa0250830:intron | 15.0% |
| !!! | TTTGATGAATTTTAATTGTT+AGG | + | chr2_2:39911212-39911231 | None:intergenic | 15.0% |
| !! | ATAAATAAAATCCAATAGTT+AGG | + | chr2_2:39911558-39911577 | None:intergenic | 15.0% |
| !! | ATTAAATAATACCTGATTTA+AGG | - | chr2_2:39912268-39912287 | Msa0250830:three_prime_UTR | 15.0% |
| !! | TTAAATAATACCTGATTTAA+GGG | - | chr2_2:39912269-39912288 | Msa0250830:three_prime_UTR | 15.0% |
| !!! | CATTTAAAATAATTTCACTT+TGG | - | chr2_2:39912329-39912348 | Msa0250830:three_prime_UTR | 15.0% |
| !! | AAAAAAAAAATTGGTTGATT+TGG | - | chr2_2:39912784-39912803 | Msa0250830:intron | 15.0% |
| !!! | TCTTTAAGATTTATTTTTGT+TGG | - | chr2_2:39913080-39913099 | Msa0250830:intron | 15.0% |
| !! | ATTAATTAACATTAACTGAT+TGG | + | chr2_2:39913514-39913533 | None:intergenic | 15.0% |
| !! | AGTTAATGTTAATTAATGTA+GGG | - | chr2_2:39913517-39913536 | Msa0250830:intron | 15.0% |
| !! | AAATTTCAATGAAGAATAAA+AGG | + | chr2_2:39913899-39913918 | None:intergenic | 15.0% |
| !!! | TATTTTTACTAAGAAATCAT+AGG | + | chr2_2:39914621-39914640 | None:intergenic | 15.0% |
| !! | TCAATTCCAAATATATAAAA+TGG | + | chr2_2:39914648-39914667 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAAATTATAGAAA+TGG | - | chr2_2:39915041-39915060 | Msa0250830:intron | 15.0% |
| !!! | TGTTATTATACATATTTTCT+TGG | - | chr2_2:39915251-39915270 | Msa0250830:intron | 15.0% |
| !!! | AATTATGTATTTTGTCATTA+TGG | - | chr2_2:39915322-39915341 | Msa0250830:CDS | 15.0% |
| !! | GGTTAATAATATTTGATTAA+AGG | - | chr2_2:39915514-39915533 | Msa0250830:intron | 15.0% |
| !!! | AATTTAAGATAGGATAATAA+TGG | - | chr2_2:39915590-39915609 | Msa0250830:intron | 15.0% |
| !! | AATAAAAGCAATAAAAATTG+TGG | + | chr2_2:39915949-39915968 | None:intergenic | 15.0% |
| !!! | TTCAAATTTTCTTATTTCTT+AGG | - | chr2_2:39915973-39915992 | Msa0250830:intron | 15.0% |
| !! | GAAAATTGAACAAAAAAAAA+TGG | + | chr2_2:39916245-39916264 | None:intergenic | 15.0% |
| !!! | TTATTAGTTTTTATTGCATT+AGG | + | chr2_2:39917254-39917273 | None:intergenic | 15.0% |
| !! | TTACAACAAATTAAGTAAGA+AGG | + | chr2_2:39910061-39910080 | None:intergenic | 20.0% |
| !! | TTTAAATCTTAGAATATGTG+AGG | - | chr2_2:39910138-39910157 | Msa0250830:intron | 20.0% |
| !! | TTTATATAACTTAATGGTAG+AGG | - | chr2_2:39910525-39910544 | Msa0250830:intron | 20.0% |
| !!! | GTTTTTTTTTACCATGTTAT+TGG | - | chr2_2:39910741-39910760 | Msa0250830:intron | 20.0% |
| !!! | AAACTTGAAATTTTGCTTTA+AGG | - | chr2_2:39910866-39910885 | Msa0250830:intron | 20.0% |
| !! | ACTATACCAACTATAATTAT+TGG | + | chr2_2:39910936-39910955 | None:intergenic | 20.0% |
| !! | AAAACTATATTTAAAGAGTG+TGG | - | chr2_2:39911157-39911176 | Msa0250830:three_prime_UTR | 20.0% |
| !! | TCAATGTTGATGTTAATTTA+TGG | + | chr2_2:39911988-39912007 | None:intergenic | 20.0% |
| !!! | ATGTATGTTGGTTTTTTATT+TGG | - | chr2_2:39912072-39912091 | Msa0250830:three_prime_UTR | 20.0% |
| !! | TATTGGAAATTATATGTTTG+TGG | - | chr2_2:39912104-39912123 | Msa0250830:three_prime_UTR | 20.0% |
| !!! | ATGATAGAAGTGTTTTTATT+TGG | - | chr2_2:39912132-39912151 | Msa0250830:three_prime_UTR | 20.0% |
| !! | TAATTAGAATATAGTCTCTT+TGG | - | chr2_2:39912178-39912197 | Msa0250830:three_prime_UTR | 20.0% |
| !! | ATTCATCATATGAAAACATA+GGG | + | chr2_2:39912420-39912439 | None:intergenic | 20.0% |
| !!! | TGCTTTATGTTGATAATTTT+TGG | - | chr2_2:39912691-39912710 | Msa0250830:intron | 20.0% |
| !!! | TTTTTTAAATTCCAAAACTC+AGG | + | chr2_2:39912765-39912784 | None:intergenic | 20.0% |
| !!! | GAATTGCTGTATTTTTATAT+AGG | - | chr2_2:39912872-39912891 | Msa0250830:intron | 20.0% |
| !! | AATACATAAACAAAAGCAAA+GGG | + | chr2_2:39913135-39913154 | None:intergenic | 20.0% |
| !! | AAATACATAAACAAAAGCAA+AGG | + | chr2_2:39913136-39913155 | None:intergenic | 20.0% |
| !!! | TTGCTTTTGTTTATGTATTT+AGG | - | chr2_2:39913136-39913155 | Msa0250830:intron | 20.0% |
| !!! | TGCTTTTGTTTATGTATTTA+GGG | - | chr2_2:39913137-39913156 | Msa0250830:intron | 20.0% |
| !! | CAGTTAATGTTAATTAATGT+AGG | - | chr2_2:39913516-39913535 | Msa0250830:intron | 20.0% |
| !! | GTTAATGTTAATTAATGTAG+GGG | - | chr2_2:39913518-39913537 | Msa0250830:intron | 20.0% |
| !!! | TGTTTAAAGTAGAAAGAAAT+AGG | - | chr2_2:39914016-39914035 | Msa0250830:CDS | 20.0% |
| !!! | TAGCATCCATTTTATATATT+TGG | - | chr2_2:39914639-39914658 | Msa0250830:intron | 20.0% |
| !!! | TTTCTTTTTAGTTTCAGTAA+TGG | - | chr2_2:39915293-39915312 | Msa0250830:CDS | 20.0% |
| !!! | TTGTCATTATGGTTTTTAAT+TGG | - | chr2_2:39915333-39915352 | Msa0250830:CDS | 20.0% |
| !!! | CTTCTAACAAAATTTAAGAT+AGG | - | chr2_2:39915580-39915599 | Msa0250830:intron | 20.0% |
| !! | TATTCAACTATTACAATAAG+AGG | + | chr2_2:39916182-39916201 | None:intergenic | 20.0% |
| !! | CAATTATGTTTCTTATATCA+TGG | - | chr2_2:39916333-39916352 | Msa0250830:intron | 20.0% |
| !! | TTTGAACTCTAAATTAATTC+AGG | - | chr2_2:39916526-39916545 | Msa0250830:intron | 20.0% |
| !! | CTTATTTGATATATCATATG+TGG | - | chr2_2:39916552-39916571 | Msa0250830:intron | 20.0% |
| !!! | AGTTTTGATTTTTACTCATT+TGG | - | chr2_2:39916822-39916841 | Msa0250830:intron | 20.0% |
| !!! | TATATTATGATGTCATTTGA+GGG | + | chr2_2:39917392-39917411 | None:intergenic | 20.0% |
| !!! | ATATATTATGATGTCATTTG+AGG | + | chr2_2:39917393-39917412 | None:intergenic | 20.0% |
| ! | ACAAAAGAGTGAAAGAAAAA+AGG | - | chr2_2:39909870-39909889 | Msa0250830:three_prime_UTR | 25.0% |
| ! | GATTCATTTGTATTAGTGAA+TGG | - | chr2_2:39910278-39910297 | Msa0250830:intron | 25.0% |
| ! | GGATTCAAAATACTATGAAT+TGG | - | chr2_2:39910410-39910429 | Msa0250830:intron | 25.0% |
| ! | TGTTTGTATATGTGAATCAT+AGG | - | chr2_2:39910611-39910630 | Msa0250830:intron | 25.0% |
| ! | TTCTCATCCATAATCAAAAT+AGG | - | chr2_2:39910695-39910714 | Msa0250830:intron | 25.0% |
| ! | GCTGAAAACTAATATTTGTT+GGG | - | chr2_2:39910785-39910804 | Msa0250830:intron | 25.0% |
| !!! | AATTTCAAGTTTGAACCTTT+TGG | + | chr2_2:39910858-39910877 | None:intergenic | 25.0% |
| ! | CTATTGCCAATAATTATAGT+TGG | - | chr2_2:39910927-39910946 | Msa0250830:intron | 25.0% |
| !!! | TTAATGTTCTGCTTTGTTTA+TGG | - | chr2_2:39911009-39911028 | Msa0250830:intron | 25.0% |
| ! | CAAAAATGTAAAAGAAGCTA+AGG | + | chr2_2:39911256-39911275 | None:intergenic | 25.0% |
| !! | CTTATTGAAAATGTGGTTTT+GGG | + | chr2_2:39911348-39911367 | None:intergenic | 25.0% |
| !! | TCTTATTGAAAATGTGGTTT+TGG | + | chr2_2:39911349-39911368 | None:intergenic | 25.0% |
| !! | AAAACCACATTTTCAATAAG+AGG | - | chr2_2:39911348-39911367 | Msa0250830:three_prime_UTR | 25.0% |
| !! | AAACCACATTTTCAATAAGA+GGG | - | chr2_2:39911349-39911368 | Msa0250830:three_prime_UTR | 25.0% |
| !! | AGCTTAATTTTTGATGCATA+TGG | + | chr2_2:39911375-39911394 | None:intergenic | 25.0% |
| ! | CAGATTAAATCCATATATAC+AGG | + | chr2_2:39911602-39911621 | None:intergenic | 25.0% |
| !!! | CTGGTTTTCTTCTATAAATA+TGG | - | chr2_2:39911634-39911653 | Msa0250830:three_prime_UTR | 25.0% |
| !!! | AGTGATGTGTTTTGATTTAA+TGG | - | chr2_2:39911859-39911878 | Msa0250830:three_prime_UTR | 25.0% |
| ! | TTTGTTCCTCTTTGATTAAA+TGG | - | chr2_2:39911915-39911934 | Msa0250830:three_prime_UTR | 25.0% |
| !!! | TTATTTGGCGTTTGTTTTAT+TGG | - | chr2_2:39912087-39912106 | Msa0250830:three_prime_UTR | 25.0% |
| !!! | TTTGGTCTCATCATTTTTTT+AGG | - | chr2_2:39912196-39912215 | Msa0250830:three_prime_UTR | 25.0% |
| !!! | TTGGTCTCATCATTTTTTTA+GGG | - | chr2_2:39912197-39912216 | Msa0250830:three_prime_UTR | 25.0% |
| !!! | TCATCATTTTTTTAGGGATT+TGG | - | chr2_2:39912203-39912222 | Msa0250830:three_prime_UTR | 25.0% |
| ! | ACAATTAGAGTTGAAATGTT+TGG | - | chr2_2:39912362-39912381 | Msa0250830:three_prime_UTR | 25.0% |
| ! | CAATTAGAGTTGAAATGTTT+GGG | - | chr2_2:39912363-39912382 | Msa0250830:three_prime_UTR | 25.0% |
| ! | CATTCATCATATGAAAACAT+AGG | + | chr2_2:39912421-39912440 | None:intergenic | 25.0% |
| ! | TCAACATAAAGCATAAACTA+CGG | + | chr2_2:39912684-39912703 | None:intergenic | 25.0% |
| !! | TGGTTGTATGATTTTGTTAA+AGG | - | chr2_2:39912804-39912823 | Msa0250830:intron | 25.0% |
| ! | TGAAAAAGGATTTAGATGTT+TGG | - | chr2_2:39912933-39912952 | Msa0250830:intron | 25.0% |
| ! | GATTTAGATGTTTGGAAAAT+TGG | - | chr2_2:39912941-39912960 | Msa0250830:intron | 25.0% |
| !! | CAGAAAGATGTCTAATTTTT+AGG | - | chr2_2:39913277-39913296 | Msa0250830:intron | 25.0% |
| !! | TTTAGGTGACATTTTTAATG+AGG | - | chr2_2:39913294-39913313 | Msa0250830:intron | 25.0% |
| ! | AAAACATCAGTTTGCATTTA+CGG | + | chr2_2:39913628-39913647 | None:intergenic | 25.0% |
| ! | TTCAATGAAGAATAAAAGGA+AGG | + | chr2_2:39913895-39913914 | None:intergenic | 25.0% |
| ! | TCTTGGATCAATTAAACTTA+AGG | - | chr2_2:39914515-39914534 | Msa0250830:intron | 25.0% |
| ! | GTAAGAACAGTAGTTAATAT+GGG | + | chr2_2:39914550-39914569 | None:intergenic | 25.0% |
| ! | AGAAGGCTATTTGAAAAATA+AGG | - | chr2_2:39914913-39914932 | Msa0250830:intron | 25.0% |
| !! | CTTAGTTTGATTGTGTTATT+TGG | - | chr2_2:39915069-39915088 | Msa0250830:intron | 25.0% |
| !! | TGAATAATGAAATTTGGTGA+AGG | - | chr2_2:39915116-39915135 | Msa0250830:intron | 25.0% |
| !!! | TGGTTTTTAATTGGCAAAAT+TGG | - | chr2_2:39915342-39915361 | Msa0250830:CDS | 25.0% |
| ! | CAAATACTTTAGGTAATTTG+TGG | - | chr2_2:39915437-39915456 | Msa0250830:intron | 25.0% |
| !! | CAATAGTTAGTATCAGTTTT+AGG | - | chr2_2:39915545-39915564 | Msa0250830:intron | 25.0% |
| !!! | TAGTATCAGTTTTAGGTAAT+TGG | - | chr2_2:39915552-39915571 | Msa0250830:intron | 25.0% |
| ! | CTTCATCAACATATTTGATT+TGG | - | chr2_2:39915639-39915658 | Msa0250830:intron | 25.0% |
| ! | TACAAATGTTAATGACAACA+AGG | - | chr2_2:39916398-39916417 | Msa0250830:intron | 25.0% |
| ! | AAAGTAAAACATAGGAGAAT+GGG | + | chr2_2:39916438-39916457 | None:intergenic | 25.0% |
| !!! | GCTTTTTGAAAGTAAAACAT+AGG | + | chr2_2:39916446-39916465 | None:intergenic | 25.0% |
| ! | TAGATAAATCGCAACATTAA+AGG | + | chr2_2:39916686-39916705 | None:intergenic | 25.0% |
| !!! | AACATTAGCTTCTAAGATTT+TGG | + | chr2_2:39917225-39917244 | None:intergenic | 25.0% |
| !! | AAAACTAATAAGAGCTTTAG+TGG | - | chr2_2:39917263-39917282 | Msa0250830:intron | 25.0% |
| !! | AAACTAATAAGAGCTTTAGT+GGG | - | chr2_2:39917264-39917283 | Msa0250830:intron | 25.0% |
| ! | AAAGATGATGATTGTACAAA+GGG | - | chr2_2:39917353-39917372 | Msa0250830:CDS | 25.0% |
| ! | CATTTCCCTATAAGATTTTG+CGG | - | chr2_2:39909982-39910001 | Msa0250830:three_prime_UTR | 30.0% |
| ATTGACCGCAAAATCTTATA+GGG | + | chr2_2:39909990-39910009 | None:intergenic | 30.0% | |
| CAACTCATAACAATATACCA+AGG | + | chr2_2:39910023-39910042 | None:intergenic | 30.0% | |
| TGTATAAGGGAGACTTAAAA+AGG | + | chr2_2:39910118-39910137 | None:intergenic | 30.0% | |
| TTGAGATTGTTGTAAGAGAT+AGG | - | chr2_2:39910203-39910222 | Msa0250830:intron | 30.0% | |
| TTTGTTCTTGTAGAGACTAT+TGG | - | chr2_2:39910254-39910273 | Msa0250830:intron | 30.0% | |
| CAAAATACTATGAATTGGCT+TGG | - | chr2_2:39910415-39910434 | Msa0250830:intron | 30.0% | |
| AATTTGGCCACATTATTTAC+AGG | - | chr2_2:39910462-39910481 | Msa0250830:intron | 30.0% | |
| TCAAAACCATATTCCAAGAT+TGG | + | chr2_2:39910497-39910516 | None:intergenic | 30.0% | |
| GTCTTGAATGGATATTTGAT+TGG | + | chr2_2:39910582-39910601 | None:intergenic | 30.0% | |
| !!! | ATATTAGTTTTCAGCCAAGT+CGG | + | chr2_2:39910780-39910799 | None:intergenic | 30.0% |
| GGCTGAAAACTAATATTTGT+TGG | - | chr2_2:39910784-39910803 | Msa0250830:intron | 30.0% | |
| TGGTATAGTATAAGAGAGAT+CGG | - | chr2_2:39910947-39910966 | Msa0250830:intron | 30.0% | |
| ! | GGATCAATATTTTACTGAGA+GGG | + | chr2_2:39911092-39911111 | None:intergenic | 30.0% |
| ! | TGGATCAATATTTTACTGAG+AGG | + | chr2_2:39911093-39911112 | None:intergenic | 30.0% |
| ! | TATTGATCCAACTTGTTTAG+TGG | - | chr2_2:39911103-39911122 | Msa0250830:intron | 30.0% |
| ! | ATTGATCCAACTTGTTTAGT+GGG | - | chr2_2:39911104-39911123 | Msa0250830:intron | 30.0% |
| AAATCAAATTTCCTCTACCA+TGG | + | chr2_2:39911445-39911464 | None:intergenic | 30.0% | |
| GGTAAAAGTGGAAAAATTAG+CGG | + | chr2_2:39911510-39911529 | None:intergenic | 30.0% | |
| TTTCGACATTTCCTAACTAT+TGG | - | chr2_2:39911544-39911563 | Msa0250830:three_prime_UTR | 30.0% | |
| !! | CTGTTTTTCTCCTGTATATA+TGG | - | chr2_2:39911589-39911608 | Msa0250830:three_prime_UTR | 30.0% |
| AACACATCACTACAACAAAA+AGG | + | chr2_2:39911850-39911869 | None:intergenic | 30.0% | |
| ! | AATCTGCCATTTAATCAAAG+AGG | + | chr2_2:39911924-39911943 | None:intergenic | 30.0% |
| ATATATCAGTGCTATGAGTT+CGG | - | chr2_2:39912010-39912029 | Msa0250830:three_prime_UTR | 30.0% | |
| CATTGATGCTATAGCAAAAA+AGG | + | chr2_2:39912548-39912567 | None:intergenic | 30.0% | |
| !! | TCTTTGAGAAGCATTTGAAT+TGG | - | chr2_2:39912588-39912607 | Msa0250830:three_prime_UTR | 30.0% |
| !!! | TGTTTTTAGTGAGTTGTGTA+TGG | - | chr2_2:39912653-39912672 | Msa0250830:intron | 30.0% |
| !!! | TGATAATTTTTGGTCTGTGA+TGG | - | chr2_2:39912701-39912720 | Msa0250830:intron | 30.0% |
| ! | TTAGTTATTCACCTGAGTTT+TGG | - | chr2_2:39912751-39912770 | Msa0250830:intron | 30.0% |
| !! | ATGTTTGGAAAATTGGCTTT+AGG | - | chr2_2:39912948-39912967 | Msa0250830:intron | 30.0% |
| !! | TGTTTGGAAAATTGGCTTTA+GGG | - | chr2_2:39912949-39912968 | Msa0250830:intron | 30.0% |
| AAAGGTTAGGGAAATTATGT+CGG | - | chr2_2:39913039-39913058 | Msa0250830:intron | 30.0% | |
| TATGTTAAGCATTTACCTGT+TGG | + | chr2_2:39913336-39913355 | None:intergenic | 30.0% | |
| ! | TCCAAACTAAGCCTTTTAAT+TGG | - | chr2_2:39913585-39913604 | Msa0250830:intron | 30.0% |
| ! | AAATGGATGAACTTTGTTTC+TGG | - | chr2_2:39913842-39913861 | Msa0250830:CDS | 30.0% |
| !!! | AAACGGATCTGCTTTTTAAA+TGG | - | chr2_2:39914088-39914107 | Msa0250830:CDS | 30.0% |
| TTTGATGTGTTCAACTCAAA+AGG | - | chr2_2:39914116-39914135 | Msa0250830:CDS | 30.0% | |
| AGAACACATATAATTGTGTC+TGG | - | chr2_2:39914164-39914183 | Msa0250830:intron | 30.0% | |
| ! | GTAGGTATCTATTGACTAAA+TGG | - | chr2_2:39914213-39914232 | Msa0250830:intron | 30.0% |
| TGAGAGATTCAATGAGTTTA+TGG | - | chr2_2:39914297-39914316 | Msa0250830:intron | 30.0% | |
| !! | CTAAAACTGAACTTTGAAAC+AGG | - | chr2_2:39914401-39914420 | Msa0250830:intron | 30.0% |
| ! | AAGGTAAAGACATGTTTTCT+TGG | - | chr2_2:39914498-39914517 | Msa0250830:intron | 30.0% |
| GGATCAATTAAACTTAAGGT+TGG | - | chr2_2:39914519-39914538 | Msa0250830:intron | 30.0% | |
| TCAATTAAACTTAAGGTTGG+TGG | - | chr2_2:39914522-39914541 | Msa0250830:intron | 30.0% | |
| ! | CAATTAAACTTAAGGTTGGT+GGG | - | chr2_2:39914523-39914542 | Msa0250830:intron | 30.0% |
| !! | AATTAAACTTAAGGTTGGTG+GGG | - | chr2_2:39914524-39914543 | Msa0250830:intron | 30.0% |
| GGTAAGAACAGTAGTTAATA+TGG | + | chr2_2:39914551-39914570 | None:intergenic | 30.0% | |
| TTGAAACATTCATAGTGAGT+TGG | + | chr2_2:39914837-39914856 | None:intergenic | 30.0% | |
| !!! | GTTGCTATTTTTTAAGTTCC+AGG | - | chr2_2:39914858-39914877 | Msa0250830:intron | 30.0% |
| AAAAATAAGGTCATTCCTTG+AGG | - | chr2_2:39914926-39914945 | Msa0250830:intron | 30.0% | |
| TTGAGTTATATAAGACCTCA+AGG | + | chr2_2:39914944-39914963 | None:intergenic | 30.0% | |
| TTTAATTGGCAAAATTGGAG+AGG | - | chr2_2:39915347-39915366 | Msa0250830:CDS | 30.0% | |
| GTTGGCTAATCAAATACTTT+AGG | - | chr2_2:39915427-39915446 | Msa0250830:intron | 30.0% | |
| ! | TGAGAAAGAGTACAATCAAA+GGG | + | chr2_2:39915474-39915493 | None:intergenic | 30.0% |
| ! | ATGAGAAAGAGTACAATCAA+AGG | + | chr2_2:39915475-39915494 | None:intergenic | 30.0% |
| !! | ATAATAATGGAGAGCATTTG+AGG | - | chr2_2:39915603-39915622 | Msa0250830:intron | 30.0% |
| !! | TAATAATGGAGAGCATTTGA+GGG | - | chr2_2:39915604-39915623 | Msa0250830:intron | 30.0% |
| !! | CATCAACATATTTGATTTGG+TGG | - | chr2_2:39915642-39915661 | Msa0250830:intron | 30.0% |
| AGAGAAAATGTAGAGAAAGA+AGG | + | chr2_2:39915822-39915841 | None:intergenic | 30.0% | |
| GTATGTGTGAAAACTGAAAT+GGG | + | chr2_2:39916271-39916290 | None:intergenic | 30.0% | |
| TGTATGTGTGAAAACTGAAA+TGG | + | chr2_2:39916272-39916291 | None:intergenic | 30.0% | |
| GAAAGTAAAACATAGGAGAA+TGG | + | chr2_2:39916439-39916458 | None:intergenic | 30.0% | |
| ! | TAATTTAGAGTTCAAAGCAG+TGG | + | chr2_2:39916522-39916541 | None:intergenic | 30.0% |
| ! | ATTTTCCCTCAGTATATTTC+AGG | - | chr2_2:39916590-39916609 | Msa0250830:intron | 30.0% |
| TACAACCTGAAATATACTGA+GGG | + | chr2_2:39916598-39916617 | None:intergenic | 30.0% | |
| GTATTCTGCATTGAAGTATA+CGG | - | chr2_2:39916723-39916742 | Msa0250830:intron | 30.0% | |
| ! | AACTAATAAGAGCTTTAGTG+GGG | - | chr2_2:39917265-39917284 | Msa0250830:intron | 30.0% |
| !! | AATTTCTGGAACACATTTAC+TGG | + | chr2_2:39917314-39917333 | None:intergenic | 30.0% |
| GTAAATGTGTTCCAGAAATT+AGG | - | chr2_2:39917314-39917333 | Msa0250830:intron | 30.0% | |
| AACTAACTCAACCTAATTTC+TGG | + | chr2_2:39917328-39917347 | None:intergenic | 30.0% | |
| GAAAGATGATGATTGTACAA+AGG | - | chr2_2:39917352-39917371 | Msa0250830:CDS | 30.0% | |
| TGATCGGATCTGAAGAAATT+TGG | + | chr2_2:39909615-39909634 | None:intergenic | 35.0% | |
| ATTTCTTCAGATCCGATCAA+TGG | - | chr2_2:39909616-39909635 | Msa0250830:three_prime_UTR | 35.0% | |
| CACAATCTCTCTATAACTCA+CGG | + | chr2_2:39909792-39909811 | None:intergenic | 35.0% | |
| CATTGACCGCAAAATCTTAT+AGG | + | chr2_2:39909991-39910010 | None:intergenic | 35.0% | |
| CTTAAAAAGGAAACGTTCGT+AGG | + | chr2_2:39910105-39910124 | None:intergenic | 35.0% | |
| TTGTCATTCCGTTATGAAGT+TGG | - | chr2_2:39910162-39910181 | Msa0250830:intron | 35.0% | |
| TTGTTGTAAGAGATAGGACT+AGG | - | chr2_2:39910209-39910228 | Msa0250830:intron | 35.0% | |
| AACAAATACCACCACTACAA+TGG | + | chr2_2:39910240-39910259 | None:intergenic | 35.0% | |
| GTACATGCTATGATATGTAC+AGG | + | chr2_2:39910337-39910356 | None:intergenic | 35.0% | |
| GTACATATCATAGCATGTAC+TGG | - | chr2_2:39910337-39910356 | Msa0250830:intron | 35.0% | |
| !! | AATACTATGAATTGGCTTGG+AGG | - | chr2_2:39910418-39910437 | Msa0250830:intron | 35.0% |
| AGTCTTGCTCATTGGAAATT+TGG | - | chr2_2:39910446-39910465 | Msa0250830:intron | 35.0% | |
| TAGCGTACCTGTAAATAATG+TGG | + | chr2_2:39910472-39910491 | None:intergenic | 35.0% | |
| TGAATCATAGGTCTAAACCT+TGG | - | chr2_2:39910623-39910642 | Msa0250830:intron | 35.0% | |
| !!! | GGTTGTGCCTATTTTGATTA+TGG | + | chr2_2:39910705-39910724 | None:intergenic | 35.0% |
| GATACTTCACACCAATAACA+TGG | + | chr2_2:39910755-39910774 | None:intergenic | 35.0% | |
| CAGAGATGACTTTCCATTAA+AGG | + | chr2_2:39910820-39910839 | None:intergenic | 35.0% | |
| TATCCAAATCAAGTTCCACT+TGG | - | chr2_2:39910889-39910908 | Msa0250830:intron | 35.0% | |
| TTGTTTATGGTTGAGAGCTT+TGG | - | chr2_2:39911022-39911041 | Msa0250830:intron | 35.0% | |
| GTAACTTAAGATCTCACTCA+AGG | - | chr2_2:39911128-39911147 | Msa0250830:three_prime_UTR | 35.0% | |
| !! | TGGCTGTCATTTGTTATTTG+TGG | - | chr2_2:39911177-39911196 | Msa0250830:three_prime_UTR | 35.0% |
| AATTCCAATTTCCTGTTCCA+TGG | - | chr2_2:39911425-39911444 | Msa0250830:three_prime_UTR | 35.0% | |
| !! | TTTCCACTTTTACCCTTTAG+AGG | - | chr2_2:39911516-39911535 | Msa0250830:three_prime_UTR | 35.0% |
| !! | TTCCACTTTTACCCTTTAGA+GGG | - | chr2_2:39911517-39911536 | Msa0250830:three_prime_UTR | 35.0% |
| ACGAAAATCTACACAAACCT+TGG | + | chr2_2:39911760-39911779 | None:intergenic | 35.0% | |
| !!! | GTTTTGATTTAATGGCCTGA+TGG | - | chr2_2:39911867-39911886 | Msa0250830:three_prime_UTR | 35.0% |
| TCATAATCTCTCAATCCATC+AGG | + | chr2_2:39911885-39911904 | None:intergenic | 35.0% | |
| !!! | TACCTGATTTAAGGGCATTT+TGG | - | chr2_2:39912277-39912296 | Msa0250830:three_prime_UTR | 35.0% |
| CTTGCAACAATGAACTCAAT+AGG | - | chr2_2:39912452-39912471 | Msa0250830:three_prime_UTR | 35.0% | |
| ACAATGAACTCAATAGGTCA+AGG | - | chr2_2:39912458-39912477 | Msa0250830:three_prime_UTR | 35.0% | |
| ATTACAGAGTGAAAGGTAGT+GGG | + | chr2_2:39912510-39912529 | None:intergenic | 35.0% | |
| ACACAAGATTACAGAGTGAA+AGG | + | chr2_2:39912517-39912536 | None:intergenic | 35.0% | |
| !! | TTTTGCTATAGCATCAATGC+AGG | - | chr2_2:39912549-39912568 | Msa0250830:three_prime_UTR | 35.0% |
| GAGCATATTGTTGATCTGAA+AGG | - | chr2_2:39912614-39912633 | Msa0250830:intron | 35.0% | |
| TGATGGAAGAGTTTCTAACA+TGG | - | chr2_2:39912718-39912737 | Msa0250830:intron | 35.0% | |
| ATCAGTGCTGTATTACAAAG+TGG | - | chr2_2:39912840-39912859 | Msa0250830:intron | 35.0% | |
| ATATAGGTTTCGCAATGTCT+AGG | - | chr2_2:39912888-39912907 | Msa0250830:intron | 35.0% | |
| TATAGGTTTCGCAATGTCTA+GGG | - | chr2_2:39912889-39912908 | Msa0250830:intron | 35.0% | |
| CTGTATCAAGGACTTGAAAA+AGG | - | chr2_2:39912919-39912938 | Msa0250830:intron | 35.0% | |
| ! | GCTAATCATTGGTGATTCAA+AGG | - | chr2_2:39913021-39913040 | Msa0250830:intron | 35.0% |
| ! | TCATTGGTGATTCAAAGGTT+AGG | - | chr2_2:39913026-39913045 | Msa0250830:intron | 35.0% |
| ! | CATTGGTGATTCAAAGGTTA+GGG | - | chr2_2:39913027-39913046 | Msa0250830:intron | 35.0% |
| !! | ATTATGTCGGATTTGTTGAG+TGG | - | chr2_2:39913052-39913071 | Msa0250830:intron | 35.0% |
| ! | AGTGATAAGCAGGGAATTTT+GGG | + | chr2_2:39913254-39913273 | None:intergenic | 35.0% |
| ! | AGGTGACATTTTTAATGAGG+AGG | - | chr2_2:39913297-39913316 | Msa0250830:intron | 35.0% |
| ! | TTGTTGTTGCTGTTGTTCTA+GGG | - | chr2_2:39913400-39913419 | Msa0250830:intron | 35.0% |
| !! | GTTGTTCTAGGGTTTGAAAA+TGG | - | chr2_2:39913411-39913430 | Msa0250830:intron | 35.0% |
| !! | TTCTAGGGTTTGAAAATGGT+AGG | - | chr2_2:39913415-39913434 | Msa0250830:intron | 35.0% |
| ! | TCTAGGGTTTGAAAATGGTA+GGG | - | chr2_2:39913416-39913435 | Msa0250830:intron | 35.0% |
| TTAACTGATTGGACTATGCA+GGG | + | chr2_2:39913503-39913522 | None:intergenic | 35.0% | |
| ATTAACTGATTGGACTATGC+AGG | + | chr2_2:39913504-39913523 | None:intergenic | 35.0% | |
| ! | TAAAAGGCTTAGTTTGGATG+CGG | + | chr2_2:39913583-39913602 | None:intergenic | 35.0% |
| GCCAATTAAAAGGCTTAGTT+TGG | + | chr2_2:39913589-39913608 | None:intergenic | 35.0% | |
| GTTTGCATTTACGGAAAACA+TGG | + | chr2_2:39913619-39913638 | None:intergenic | 35.0% | |
| TGTAAATGTTGACATGTGTG+CGG | - | chr2_2:39913660-39913679 | Msa0250830:intron | 35.0% | |
| GTACTATATTCAGCGAGAAA+TGG | + | chr2_2:39913703-39913722 | None:intergenic | 35.0% | |
| CTTCTCAGATATGCATATTC+TGG | - | chr2_2:39913781-39913800 | Msa0250830:three_prime_UTR | 35.0% | |
| ! | TTCAACCTTGTTTCTCTCAA+CGG | + | chr2_2:39913824-39913843 | None:intergenic | 35.0% |
| TGAGAGAAACAAGGTTGAAA+TGG | - | chr2_2:39913825-39913844 | Msa0250830:CDS | 35.0% | |
| !! | TTTGTTTCTGGTGTCAATAC+TGG | - | chr2_2:39913854-39913873 | Msa0250830:CDS | 35.0% |
| CTTGAGTTTGTGTCAAGAAA+CGG | - | chr2_2:39914071-39914090 | Msa0250830:CDS | 35.0% | |
| !!! | GGAGTTTTGAACTTCATTGA+TGG | - | chr2_2:39914185-39914204 | Msa0250830:intron | 35.0% |
| ACTTATAACAGTTCATACGC+AGG | + | chr2_2:39914251-39914270 | None:intergenic | 35.0% | |
| !! | ACTTTGAAACAGGTTGAAAC+AGG | - | chr2_2:39914411-39914430 | Msa0250830:intron | 35.0% |
| GAAGAATATGCAGTTGAAAC+CGG | - | chr2_2:39914446-39914465 | Msa0250830:intron | 35.0% | |
| ! | TTTAAAGCATTTAGAGCCTC+CGG | + | chr2_2:39914468-39914487 | None:intergenic | 35.0% |
| !! | TGCTTTAAAATTGCCAGTGA+AGG | - | chr2_2:39914479-39914498 | Msa0250830:intron | 35.0% |
| AAACATGTCTTTACCTTCAC+TGG | + | chr2_2:39914495-39914514 | None:intergenic | 35.0% | |
| ATGAAGCTTACGAACAACTT+TGG | + | chr2_2:39914595-39914614 | None:intergenic | 35.0% | |
| TGCTTCCGTATATGTGATAA+TGG | - | chr2_2:39914708-39914727 | Msa0250830:intron | 35.0% | |
| CAGCACCATTATCACATATA+CGG | + | chr2_2:39914716-39914735 | None:intergenic | 35.0% | |
| ACAACAAAATATGAGTGTCC+TGG | + | chr2_2:39914879-39914898 | None:intergenic | 35.0% | |
| ! | TGTTCTTTTGCAACTTGAGA+AGG | - | chr2_2:39914896-39914915 | Msa0250830:intron | 35.0% |
| !! | ATAACTCAATTTGCTGTGTG+CGG | - | chr2_2:39914955-39914974 | Msa0250830:intron | 35.0% |
| ! | GACAACATGATAGAGCTTTT+AGG | - | chr2_2:39915183-39915202 | Msa0250830:intron | 35.0% |
| ! | CTTTTCATTGTGAGTGCTAT+TGG | - | chr2_2:39915208-39915227 | Msa0250830:intron | 35.0% |
| ! | GAGAAAGAGTACAATCAAAG+GGG | + | chr2_2:39915473-39915492 | None:intergenic | 35.0% |
| GTACTCTTTCTCATCAGTTT+AGG | - | chr2_2:39915481-39915500 | Msa0250830:intron | 35.0% | |
| AAGCAAGTGACTTAAAGAAC+AGG | + | chr2_2:39915682-39915701 | None:intergenic | 35.0% | |
| ATGTAGAGAAAGAAGGAAGA+GGG | + | chr2_2:39915815-39915834 | None:intergenic | 35.0% | |
| AATGTAGAGAAAGAAGGAAG+AGG | + | chr2_2:39915816-39915835 | None:intergenic | 35.0% | |
| CAATCCAATAACCAAACCAT+CGG | + | chr2_2:39916039-39916058 | None:intergenic | 35.0% | |
| TACTGAGGGAAAATGTTTCT+AGG | + | chr2_2:39916584-39916603 | None:intergenic | 35.0% | |
| GTACAACCTGAAATATACTG+AGG | + | chr2_2:39916599-39916618 | None:intergenic | 35.0% | |
| ! | GTCTATCTAGGTTGAAGATT+CGG | - | chr2_2:39916899-39916918 | Msa0250830:intron | 35.0% |
| TGTCATTCATAGCACAAACA+CGG | + | chr2_2:39916925-39916944 | None:intergenic | 35.0% | |
| GTTTGTGCTATGAATGACAT+TGG | - | chr2_2:39916926-39916945 | Msa0250830:intron | 35.0% | |
| AATGACATTGGAACCCAAAA+TGG | - | chr2_2:39916938-39916957 | Msa0250830:intron | 35.0% | |
| ! | TAATGCCAAGACACCATTTT+GGG | + | chr2_2:39916954-39916973 | None:intergenic | 35.0% |
| ! | TTAATGCCAAGACACCATTT+TGG | + | chr2_2:39916955-39916974 | None:intergenic | 35.0% |
| AAATGGTGTCTTGGCATTAA+AGG | - | chr2_2:39916955-39916974 | Msa0250830:intron | 35.0% | |
| TTGTAACCTGTACGAGATTA+AGG | - | chr2_2:39917039-39917058 | Msa0250830:intron | 35.0% | |
| TGTAACCTGTACGAGATTAA+GGG | - | chr2_2:39917040-39917059 | Msa0250830:intron | 35.0% | |
| TTATCAGTTCTATCTCTAGC+AGG | - | chr2_2:39917129-39917148 | Msa0250830:intron | 35.0% | |
| TTGGTCGAAAATAGCAACGT+CGG | + | chr2_2:39909596-39909615 | None:intergenic | 40.0% | |
| CCGACTGATAAACCATTGAT+CGG | + | chr2_2:39909631-39909650 | None:intergenic | 40.0% | |
| CCGATCAATGGTTTATCAGT+CGG | - | chr2_2:39909628-39909647 | Msa0250830:three_prime_UTR | 40.0% | |
| ! | ATGGTTTATCAGTCGGTGTT+CGG | - | chr2_2:39909635-39909654 | Msa0250830:three_prime_UTR | 40.0% |
| CTCATCGAGAATTGTCTTCT+CGG | + | chr2_2:39909736-39909755 | None:intergenic | 40.0% | |
| CGTGAGTTATAGAGAGATTG+TGG | - | chr2_2:39909790-39909809 | Msa0250830:three_prime_UTR | 40.0% | |
| CTTCGAGACCAACTTCATAA+CGG | + | chr2_2:39910173-39910192 | None:intergenic | 40.0% | |
| ACTAGGTTTCACCATTGTAG+TGG | - | chr2_2:39910226-39910245 | Msa0250830:intron | 40.0% | |
| CATGTACTGGAACTTACTGA+AGG | - | chr2_2:39910350-39910369 | Msa0250830:intron | 40.0% | |
| ! | AGGAAGATAGTCTTGCTCAT+TGG | - | chr2_2:39910438-39910457 | Msa0250830:intron | 40.0% |
| ACACTAAGCTCAGTCTTGAA+TGG | + | chr2_2:39910594-39910613 | None:intergenic | 40.0% | |
| CACTCATCAGTCATCATCTT+AGG | + | chr2_2:39910665-39910684 | None:intergenic | 40.0% | |
| GACTTTCCATTAAAGGTGAC+AGG | + | chr2_2:39910813-39910832 | None:intergenic | 40.0% | |
| GAGATCGGTGTAAAAAAGTG+TGG | - | chr2_2:39910962-39910981 | Msa0250830:intron | 40.0% | |
| GTTACTCCCACTAAACAAGT+TGG | + | chr2_2:39911113-39911132 | None:intergenic | 40.0% | |
| TCCATGTGAATCATTTGCAG+AGG | - | chr2_2:39911305-39911324 | Msa0250830:three_prime_UTR | 40.0% | |
| CCATGTGAATCATTTGCAGA+GGG | - | chr2_2:39911306-39911325 | Msa0250830:three_prime_UTR | 40.0% | |
| TGGCCCTCTTATTGAAAATG+TGG | + | chr2_2:39911355-39911374 | None:intergenic | 40.0% | |
| TCTACCATGGAACAGGAAAT+TGG | + | chr2_2:39911432-39911451 | None:intergenic | 40.0% | |
| AATTTCCTGTTCCATGGTAG+AGG | - | chr2_2:39911431-39911450 | Msa0250830:three_prime_UTR | 40.0% | |
| AATTTCCTCTACCATGGAAC+AGG | + | chr2_2:39911439-39911458 | None:intergenic | 40.0% | |
| !! | TCCACTTTTACCCTTTAGAG+GGG | - | chr2_2:39911518-39911537 | Msa0250830:three_prime_UTR | 40.0% |
| TAATCTGTCGACACATCATC+TGG | - | chr2_2:39911615-39911634 | Msa0250830:three_prime_UTR | 40.0% | |
| ATGCCGATATTGAATGGAAC+CGG | + | chr2_2:39911696-39911715 | None:intergenic | 40.0% | |
| CTGAGAATGCCGATATTGAA+TGG | + | chr2_2:39911702-39911721 | None:intergenic | 40.0% | |
| AACAAAAAGGAACACATCGC+TGG | + | chr2_2:39911837-39911856 | None:intergenic | 40.0% | |
| TGCTATGAGTTCGGTTATTC+TGG | - | chr2_2:39912019-39912038 | Msa0250830:three_prime_UTR | 40.0% | |
| GCTATGAGTTCGGTTATTCT+GGG | - | chr2_2:39912020-39912039 | Msa0250830:three_prime_UTR | 40.0% | |
| TCGGTTATTCTGGGTATGTT+TGG | - | chr2_2:39912029-39912048 | Msa0250830:three_prime_UTR | 40.0% | |
| CTCCAAAATGCCCTTAAATC+AGG | + | chr2_2:39912282-39912301 | None:intergenic | 40.0% | |
| !!! | GGCATTTTGGAGCTAACTAT+TGG | - | chr2_2:39912290-39912309 | Msa0250830:three_prime_UTR | 40.0% |
| GATTACAGAGTGAAAGGTAG+TGG | + | chr2_2:39912511-39912530 | None:intergenic | 40.0% | |
| ATAGGTTTCGCAATGTCTAG+GGG | - | chr2_2:39912890-39912909 | Msa0250830:intron | 40.0% | |
| TGGATTGTTACTGCTAGCAA+TGG | - | chr2_2:39912983-39913002 | Msa0250830:intron | 40.0% | |
| ! | CAATGATTAGCTCCATGTGT+CGG | + | chr2_2:39913012-39913031 | None:intergenic | 40.0% |
| ! | CAGTGATAAGCAGGGAATTT+TGG | + | chr2_2:39913255-39913274 | None:intergenic | 40.0% |
| TTTCTGCACAGTGATAAGCA+GGG | + | chr2_2:39913263-39913282 | None:intergenic | 40.0% | |
| ! | GTTGTTGTTGCTGTTGTTCT+AGG | - | chr2_2:39913399-39913418 | Msa0250830:intron | 40.0% |
| CTAGGGTTTGAAAATGGTAG+GGG | - | chr2_2:39913417-39913436 | Msa0250830:intron | 40.0% | |
| ! | TGGTGTGTTGGCCAATTAAA+AGG | + | chr2_2:39913599-39913618 | None:intergenic | 40.0% |
| TTACGGAAAACATGGTGTGT+TGG | + | chr2_2:39913611-39913630 | None:intergenic | 40.0% | |
| CAAAACCGTTGAGAGAAACA+AGG | - | chr2_2:39913816-39913835 | Msa0250830:exon | 40.0% | |
| CGTTTCTTGACACAAACTCA+AGG | + | chr2_2:39914073-39914092 | None:intergenic | 40.0% | |
| GATGTGTTCAACTCAAAAGG+TGG | - | chr2_2:39914119-39914138 | Msa0250830:CDS | 40.0% | |
| ! | ACTTCATTGATGGTTGCAGT+AGG | - | chr2_2:39914195-39914214 | Msa0250830:intron | 40.0% |
| !! | CGTATATGTGATAATGGTGC+TGG | - | chr2_2:39914714-39914733 | Msa0250830:intron | 40.0% |
| !! | TGATAATGGTGCTGGTACTA+TGG | - | chr2_2:39914722-39914741 | Msa0250830:intron | 40.0% |
| GAACTGTTTGCAACATTCAG+TGG | - | chr2_2:39914744-39914763 | Msa0250830:intron | 40.0% | |
| GGTGAGTAGCTTACAATTTC+TGG | - | chr2_2:39915137-39915156 | Msa0250830:intron | 40.0% | |
| ATAATACCCCTTTGTCGAGT+TGG | - | chr2_2:39915409-39915428 | Msa0250830:intron | 40.0% | |
| ! | TGATTAGCCAACTCGACAAA+GGG | + | chr2_2:39915419-39915438 | None:intergenic | 40.0% |
| ! | TTGATTAGCCAACTCGACAA+AGG | + | chr2_2:39915420-39915439 | None:intergenic | 40.0% |
| !! | ATTTGATTTGGTGGCATCTG+AGG | - | chr2_2:39915651-39915670 | Msa0250830:intron | 40.0% |
| TGTAGAGAAAGAAGGAAGAG+GGG | + | chr2_2:39915814-39915833 | None:intergenic | 40.0% | |
| CTCTTAATCACTACCTGTAG+TGG | + | chr2_2:39915888-39915907 | None:intergenic | 40.0% | |
| !! | ACAACCGATGGTTTGGTTAT+TGG | - | chr2_2:39916032-39916051 | Msa0250830:intron | 40.0% |
| CAAAGCAGTGGTACAATGAT+TGG | + | chr2_2:39916510-39916529 | None:intergenic | 40.0% | |
| CAGCTTAGTGAAGTCTATCT+AGG | - | chr2_2:39916887-39916906 | Msa0250830:intron | 40.0% | |
| AAACTCCCTTAATCTCGTAC+AGG | + | chr2_2:39917048-39917067 | None:intergenic | 40.0% | |
| TCTGCAAAAGCCCTGCAATT+CGG | + | chr2_2:39909663-39909682 | None:intergenic | 45.0% | |
| ! | AATTGCAGGGCTTTTGCAGA+AGG | - | chr2_2:39909663-39909682 | Msa0250830:three_prime_UTR | 45.0% |
| ! | GGCTTTTGCAGAAGGAAAGA+AGG | - | chr2_2:39909671-39909690 | Msa0250830:three_prime_UTR | 45.0% |
| TCTCGATGAGAGAGAGATTG+TGG | - | chr2_2:39909746-39909765 | Msa0250830:three_prime_UTR | 45.0% | |
| AGATTGTGGCCAGACGAATA+CGG | - | chr2_2:39909804-39909823 | Msa0250830:three_prime_UTR | 45.0% | |
| GGTCAATGTAGTTCTCTCCT+TGG | - | chr2_2:39910003-39910022 | Msa0250830:three_prime_UTR | 45.0% | |
| ! | CGTTATGAAGTTGGTCTCGA+AGG | - | chr2_2:39910171-39910190 | Msa0250830:intron | 45.0% |
| AGGTTTCACCATTGTAGTGG+TGG | - | chr2_2:39910229-39910248 | Msa0250830:intron | 45.0% | |
| GCTACGCCAATCTTGGAATA+TGG | - | chr2_2:39910488-39910507 | Msa0250830:intron | 45.0% | |
| !! | TTAGTTTTCAGCCAAGTCGG+TGG | + | chr2_2:39910777-39910796 | None:intergenic | 45.0% |
| TGGGAACCTGTCACCTTTAA+TGG | - | chr2_2:39910804-39910823 | Msa0250830:intron | 45.0% | |
| GGTCCAAGTGGAACTTGATT+TGG | + | chr2_2:39910895-39910914 | None:intergenic | 45.0% | |
| TGGCAATAGCAACAGTATGC+TGG | + | chr2_2:39910916-39910935 | None:intergenic | 45.0% | |
| CCCTCTGCAAATGATTCACA+TGG | + | chr2_2:39911309-39911328 | None:intergenic | 45.0% | |
| GTCGAAAATGCCCCTCTAAA+GGG | + | chr2_2:39911531-39911550 | None:intergenic | 45.0% | |
| TGTCGAAAATGCCCCTCTAA+AGG | + | chr2_2:39911532-39911551 | None:intergenic | 45.0% | |
| CCTCCGGTTCCATTCAATAT+CGG | - | chr2_2:39911690-39911709 | Msa0250830:three_prime_UTR | 45.0% | |
| AACACATCGCTGGAACAAAG+TGG | + | chr2_2:39911827-39911846 | None:intergenic | 45.0% | |
| !! | AGAGTGAAAGGTAGTGGGAT+TGG | + | chr2_2:39912505-39912524 | None:intergenic | 45.0% |
| !! | GCTTTAGGGTTCTTGACTCA+TGG | - | chr2_2:39912963-39912982 | Msa0250830:intron | 45.0% |
| CGACACATGGAGCTAATCAT+TGG | - | chr2_2:39913010-39913029 | Msa0250830:intron | 45.0% | |
| TCAATGACATCCAATGCTCG+AGG | + | chr2_2:39913196-39913215 | None:intergenic | 45.0% | |
| CTTTCTGCACAGTGATAAGC+AGG | + | chr2_2:39913264-39913283 | None:intergenic | 45.0% | |
| GGCATTGCAAGATTTCCAAC+AGG | - | chr2_2:39913318-39913337 | Msa0250830:intron | 45.0% | |
| AATGTTGACATGTGTGCGGT+CGG | - | chr2_2:39913664-39913683 | Msa0250830:intron | 45.0% | |
| ! | AGCACTGAAATTGTGCATCG+TGG | - | chr2_2:39913974-39913993 | Msa0250830:intron | 45.0% |
| CAACTCAAAAGGTGGTCTCA+AGG | - | chr2_2:39914127-39914146 | Msa0250830:CDS | 45.0% | |
| AAAAGGTGGTCTCAAGGACA+AGG | - | chr2_2:39914133-39914152 | Msa0250830:CDS | 45.0% | |
| GAATATGCAGTTGAAACCGG+AGG | - | chr2_2:39914449-39914468 | Msa0250830:intron | 45.0% | |
| TTGTCCATCCAGTAGTACGA+TGG | + | chr2_2:39915168-39915187 | None:intergenic | 45.0% | |
| ! | GATTAGCCAACTCGACAAAG+GGG | + | chr2_2:39915418-39915437 | None:intergenic | 45.0% |
| TCTCATCAGTTTAGGCAGTC+TGG | - | chr2_2:39915489-39915508 | Msa0250830:intron | 45.0% | |
| ATCAGTTTAGGCAGTCTGGA+TGG | - | chr2_2:39915493-39915512 | Msa0250830:intron | 45.0% | |
| GAGCATTTGAGGGTAAAGCT+TGG | - | chr2_2:39915614-39915633 | Msa0250830:intron | 45.0% | |
| ATTAGGAGAGATGAGGATGC+AGG | + | chr2_2:39915791-39915810 | None:intergenic | 45.0% | |
| GAAAGAAGGAAGAGGGGATT+AGG | + | chr2_2:39915808-39915827 | None:intergenic | 45.0% | |
| GATGAGCTTAGTTCCACTAC+AGG | - | chr2_2:39915872-39915891 | Msa0250830:intron | 45.0% | |
| CTAAGTATGCTGACAACCGA+TGG | - | chr2_2:39916020-39916039 | Msa0250830:intron | 45.0% | |
| TATGCTGACAACCGATGGTT+TGG | - | chr2_2:39916025-39916044 | Msa0250830:intron | 45.0% | |
| TGGAACCCAAAATGGTGTCT+TGG | - | chr2_2:39916946-39916965 | Msa0250830:intron | 45.0% | |
| GTGTCTTGGCATTAAAGGCT+GGG | - | chr2_2:39916960-39916979 | Msa0250830:intron | 45.0% | |
| TGTCTTGGCATTAAAGGCTG+GGG | - | chr2_2:39916961-39916980 | Msa0250830:intron | 45.0% | |
| !! | CGCAGTAGTGGTTCTGTTTT+GGG | - | chr2_2:39916997-39917016 | Msa0250830:intron | 45.0% |
| !! | TAGTGGTTCTGTTTTGGGCT+GGG | - | chr2_2:39917002-39917021 | Msa0250830:intron | 45.0% |
| TATGGTTGCGGTTCTGTCAT+AGG | - | chr2_2:39917084-39917103 | Msa0250830:intron | 45.0% | |
| ! | AAGAGCTTTAGTGGGGTTTC+AGG | - | chr2_2:39917272-39917291 | Msa0250830:intron | 45.0% |
| ! | AGAGCTTTAGTGGGGTTTCA+GGG | - | chr2_2:39917273-39917292 | Msa0250830:intron | 45.0% |
| !! | GGTTTCAGGGGAAGTACTTA+TGG | - | chr2_2:39917286-39917305 | Msa0250830:intron | 45.0% |
| GTGTTCGGATCCGAATTGCA+GGG | - | chr2_2:39909650-39909669 | Msa0250830:three_prime_UTR | 50.0% | |
| AGAAGGACGCTCGTTGTTGT+CGG | - | chr2_2:39909688-39909707 | Msa0250830:three_prime_UTR | 50.0% | |
| GCAACTCTTGACTCTGACCA+AGG | + | chr2_2:39910643-39910662 | None:intergenic | 50.0% | |
| ! | GTGTGAAGTATCCACCGACT+TGG | - | chr2_2:39910763-39910782 | Msa0250830:intron | 50.0% |
| CAACAGTATGCTGGTCCAAG+TGG | + | chr2_2:39910907-39910926 | None:intergenic | 50.0% | |
| ! | GCCCCTCTAAAGGGTAAAAG+TGG | + | chr2_2:39911522-39911541 | None:intergenic | 50.0% |
| TCCCACTGTTCAGTTTCCTC+CGG | - | chr2_2:39911674-39911693 | Msa0250830:three_prime_UTR | 50.0% | |
| ACCGGAGGAAACTGAACAGT+GGG | + | chr2_2:39911678-39911697 | None:intergenic | 50.0% | |
| AACCGGAGGAAACTGAACAG+TGG | + | chr2_2:39911679-39911698 | None:intergenic | 50.0% | |
| CCGATATTGAATGGAACCGG+AGG | + | chr2_2:39911693-39911712 | None:intergenic | 50.0% | |
| TCGCTGGAACAAAGTGGAGA+AGG | + | chr2_2:39911821-39911840 | None:intergenic | 50.0% | |
| TAGGGGCTACGACTGTATCA+AGG | - | chr2_2:39912907-39912926 | Msa0250830:intron | 50.0% | |
| TAGCAATGGCAACCGACACA+TGG | - | chr2_2:39912997-39913016 | Msa0250830:intron | 50.0% | |
| ACCGCGTTCATGCCATAACT+CGG | - | chr2_2:39913162-39913181 | Msa0250830:intron | 50.0% | |
| ACCGAGTTATGGCATGAACG+CGG | + | chr2_2:39913166-39913185 | None:intergenic | 50.0% | |
| GAGGTCTCTGTACCGAGTTA+TGG | + | chr2_2:39913177-39913196 | None:intergenic | 50.0% | |
| ATGTTGACATGTGTGCGGTC+GGG | - | chr2_2:39913665-39913684 | Msa0250830:intron | 50.0% | |
| !! | TGGTGCTACCATCGTACTAC+TGG | - | chr2_2:39915157-39915176 | Msa0250830:intron | 50.0% |
| GCTACCATCGTACTACTGGA+TGG | - | chr2_2:39915161-39915180 | Msa0250830:intron | 50.0% | |
| ! | AGGATGCAGGAAGTACACAG+AGG | + | chr2_2:39915778-39915797 | None:intergenic | 50.0% |
| AGAGGGGATTAGGAGAGATG+AGG | + | chr2_2:39915798-39915817 | None:intergenic | 50.0% | |
| ACAAGCACAACAGCAGAGGT+TGG | - | chr2_2:39915909-39915928 | Msa0250830:intron | 50.0% | |
| CAACAGCAGAGGTTGGACAA+AGG | - | chr2_2:39915916-39915935 | Msa0250830:intron | 50.0% | |
| GGTGTCTTGGCATTAAAGGC+TGG | - | chr2_2:39916959-39916978 | Msa0250830:intron | 50.0% | |
| !! | AAAGGCTGGGGAGTATCTTC+TGG | - | chr2_2:39916973-39916992 | Msa0250830:intron | 50.0% |
| !! | AAGGCTGGGGAGTATCTTCT+GGG | - | chr2_2:39916974-39916993 | Msa0250830:intron | 50.0% |
| !! | GCGCAGTAGTGGTTCTGTTT+TGG | - | chr2_2:39916996-39917015 | Msa0250830:intron | 50.0% |
| !! | GTAGTGGTTCTGTTTTGGGC+TGG | - | chr2_2:39917001-39917020 | Msa0250830:intron | 50.0% |
| !! | AGTGGTTCTGTTTTGGGCTG+GGG | - | chr2_2:39917003-39917022 | Msa0250830:intron | 50.0% |
| TTGTTGCACTGCTGCTGCTA+TGG | - | chr2_2:39917066-39917085 | Msa0250830:intron | 50.0% | |
| !! | CTGCTGGTTCGGTTTGGATT+GGG | - | chr2_2:39917177-39917196 | Msa0250830:intron | 50.0% |
| ! | GAGCTTTAGTGGGGTTTCAG+GGG | - | chr2_2:39917274-39917293 | Msa0250830:intron | 50.0% |
| GGTGTTCGGATCCGAATTGC+AGG | - | chr2_2:39909649-39909668 | Msa0250830:three_prime_UTR | 55.0% | |
| TTGTGGCCAGACGAATACGG+TGG | - | chr2_2:39909807-39909826 | Msa0250830:three_prime_UTR | 55.0% | |
| CAGGTACGCTACGCCAATCT+TGG | - | chr2_2:39910481-39910500 | Msa0250830:intron | 55.0% | |
| GGCATTCTCAGCATCCTGTG+CGG | - | chr2_2:39911711-39911730 | Msa0250830:three_prime_UTR | 55.0% | |
| TCCTCGTCGTCGTTGTTCCA+AGG | - | chr2_2:39911740-39911759 | Msa0250830:three_prime_UTR | 55.0% | |
| ACCTTGGAACAACGACGACG+AGG | + | chr2_2:39911744-39911763 | None:intergenic | 55.0% | |
| GGTACAGAGACCTCGAGCAT+TGG | - | chr2_2:39913183-39913202 | Msa0250830:three_prime_UTR | 55.0% | |
| TGTTGACATGTGTGCGGTCG+GGG | - | chr2_2:39913666-39913685 | Msa0250830:intron | 55.0% | |
| GAGCACAAGCACAACAGCAG+AGG | - | chr2_2:39915905-39915924 | Msa0250830:intron | 55.0% | |
| CAGCAGAGGTTGGACAAAGG+TGG | - | chr2_2:39915919-39915938 | Msa0250830:intron | 55.0% | |
| GTATCTTCTGGGCGCAGTAG+TGG | - | chr2_2:39916985-39917004 | Msa0250830:intron | 55.0% | |
| !! | GTGGTTCTGTTTTGGGCTGG+GGG | - | chr2_2:39917004-39917023 | Msa0250830:intron | 55.0% |
| !! | TGGTTCTGTTTTGGGCTGGG+GGG | - | chr2_2:39917005-39917024 | Msa0250830:intron | 55.0% |
| CACTGCTGCTGCTATGGTTG+CGG | - | chr2_2:39917072-39917091 | Msa0250830:intron | 55.0% | |
| CGGTTCTGTCATAGGCTGCT+GGG | - | chr2_2:39917092-39917111 | Msa0250830:intron | 55.0% | |
| TTCTGTCATAGGCTGCTGGG+AGG | - | chr2_2:39917095-39917114 | Msa0250830:intron | 55.0% | |
| CCAATCCAAACCGAACCAGC+AGG | + | chr2_2:39917179-39917198 | None:intergenic | 55.0% | |
| !! | CCTGCTGGTTCGGTTTGGAT+TGG | - | chr2_2:39917176-39917195 | Msa0250830:intron | 55.0% |
| !! | GGTTCGGTTTGGATTGGGTG+AGG | - | chr2_2:39917182-39917201 | Msa0250830:intron | 55.0% |
| AGGACGCTCGTTGTTGTCGG+TGG | - | chr2_2:39909691-39909710 | Msa0250830:three_prime_UTR | 60.0% | |
| ACGCTCGTTGTTGTCGGTGG+TGG | - | chr2_2:39909694-39909713 | Msa0250830:three_prime_UTR | 60.0% | |
| GGCCAGACGAATACGGTGGT+CGG | - | chr2_2:39909811-39909830 | Msa0250830:three_prime_UTR | 60.0% | |
| GCCAGACGAATACGGTGGTC+GGG | - | chr2_2:39909812-39909831 | Msa0250830:three_prime_UTR | 60.0% | |
| AGACGAATACGGTGGTCGGG+CGG | - | chr2_2:39909815-39909834 | Msa0250830:three_prime_UTR | 60.0% | |
| CGGTGGTGAGAGAGACATGG+TGG | - | chr2_2:39909835-39909854 | Msa0250830:three_prime_UTR | 60.0% | |
| TCTCAGCATCCTGTGCGGCT+CGG | - | chr2_2:39911716-39911735 | Msa0250830:three_prime_UTR | 60.0% | |
| GCGGTTCTGTCATAGGCTGC+TGG | - | chr2_2:39917091-39917110 | Msa0250830:intron | 60.0% | |
| ! | ACTGCAGCTGCCTGCTGGTT+CGG | - | chr2_2:39917166-39917185 | Msa0250830:intron | 60.0% |
| !! | AGCTGCCTGCTGGTTCGGTT+TGG | - | chr2_2:39917171-39917190 | Msa0250830:intron | 60.0% |
| GCCCGACCACCGTATTCGTC+TGG | + | chr2_2:39909816-39909835 | None:intergenic | 65.0% | |
| GGGCGGTGGTGAGAGAGACA+TGG | - | chr2_2:39909832-39909851 | Msa0250830:three_prime_UTR | 65.0% | |
| CTGCTACTGCAGCTGCCTGC+TGG | - | chr2_2:39917161-39917180 | Msa0250830:intron | 65.0% | |
| CGAATACGGTGGTCGGGCGG+TGG | - | chr2_2:39909818-39909837 | Msa0250830:three_prime_UTR | 70.0% | |
| GACGAGGAACCGAGCCGCAC+AGG | + | chr2_2:39911728-39911747 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 39909586 | 39917460 | 39909586 | ID=Msa0250830;Name=Msa0250830 |
| chr2_2 | mRNA | 39909586 | 39917460 | 39909586 | ID=Msa0250830-mRNA-1;Parent=Msa0250830;Name=Msa0250830-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.66|0.6|0.7|0.55|0.5|10|2336|207 |
| chr2_2 | exon | 39909586 | 39910156 | 39909586 | ID=Msa0250830-mRNA-1:exon:12373;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39910894 | 39910944 | 39910894 | ID=Msa0250830-mRNA-1:exon:12372;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39911109 | 39912613 | 39911109 | ID=Msa0250830-mRNA-1:exon:12371;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39913171 | 39913269 | 39913171 | ID=Msa0250830-mRNA-1:exon:12370;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39913707 | 39913888 | 39913707 | ID=Msa0250830-mRNA-1:exon:12369;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39914004 | 39914152 | 39914004 | ID=Msa0250830-mRNA-1:exon:12368;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39915285 | 39915384 | 39915285 | ID=Msa0250830-mRNA-1:exon:12367;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39916159 | 39916275 | 39916159 | ID=Msa0250830-mRNA-1:exon:12366;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39916358 | 39916413 | 39916358 | ID=Msa0250830-mRNA-1:exon:12365;Parent=Msa0250830-mRNA-1 |
| chr2_2 | exon | 39917331 | 39917460 | 39917331 | ID=Msa0250830-mRNA-1:exon:12364;Parent=Msa0250830-mRNA-1 |
| chr2_2 | CDS | 39917331 | 39917460 | 39917331 | ID=Msa0250830-mRNA-1:cds;Parent=Msa0250830-mRNA-1 |
| chr2_2 | CDS | 39916358 | 39916413 | 39916358 | ID=Msa0250830-mRNA-1:cds;Parent=Msa0250830-mRNA-1 |
| chr2_2 | CDS | 39916159 | 39916275 | 39916159 | ID=Msa0250830-mRNA-1:cds;Parent=Msa0250830-mRNA-1 |
| chr2_2 | CDS | 39915285 | 39915384 | 39915285 | ID=Msa0250830-mRNA-1:cds;Parent=Msa0250830-mRNA-1 |
| chr2_2 | CDS | 39914004 | 39914152 | 39914004 | ID=Msa0250830-mRNA-1:cds;Parent=Msa0250830-mRNA-1 |
| chr2_2 | CDS | 39913817 | 39913888 | 39913817 | ID=Msa0250830-mRNA-1:cds;Parent=Msa0250830-mRNA-1 |
| chr2_2 | three_prime_UTR | 39913707 | 39913816 | 39913707 | ID=Msa0250830-mRNA-1:three_prime_utr;Parent=Msa0250830-mRNA-1 |
| chr2_2 | three_prime_UTR | 39913171 | 39913269 | 39913171 | ID=Msa0250830-mRNA-1:three_prime_utr;Parent=Msa0250830-mRNA-1 |
| chr2_2 | three_prime_UTR | 39911109 | 39912613 | 39911109 | ID=Msa0250830-mRNA-1:three_prime_utr;Parent=Msa0250830-mRNA-1 |
| chr2_2 | three_prime_UTR | 39910894 | 39910944 | 39910894 | ID=Msa0250830-mRNA-1:three_prime_utr;Parent=Msa0250830-mRNA-1 |
| chr2_2 | three_prime_UTR | 39909586 | 39910156 | 39909586 | ID=Msa0250830-mRNA-1:three_prime_utr;Parent=Msa0250830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
