Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256660 | XP_003595850.2 | 96.479 | 568 | 20 | 0 | 1 | 568 | 39 | 606 | 0.0 | 1140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256660 | sp|Q9SYK0|HEXO2_ARATH | 63.509 | 570 | 192 | 9 | 5 | 567 | 15 | 575 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256660 | A0A396JDF8 | 96.479 | 568 | 20 | 0 | 1 | 568 | 39 | 606 | 0.0 | 1140 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0179720 | Msa0256660 | 0.810750 | 9.869797e-51 | -8.615850e-47 |
| Msa0256660 | Msa0563140 | 0.811744 | 6.005462e-51 | -8.615850e-47 |
| Msa0256660 | Msa0645460 | 0.807313 | 5.372519e-50 | -8.615850e-47 |
| Msa0256660 | Msa0886660 | 0.824938 | 6.154156e-54 | -8.615850e-47 |
| Msa0256660 | Msa1129010 | -0.817286 | 3.567108e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256660 | MtrunA17_Chr2g0309231 | 96.479 | 568 | 20 | 0 | 1 | 568 | 39 | 606 | 0.0 | 1140 |
| Msa0256660 | MtrunA17_Chr1g0212791 | 30.189 | 583 | 321 | 17 | 6 | 562 | 11 | 533 | 6.69e-74 | 245 |
| Msa0256660 | MtrunA17_Chr7g0222681 | 32.582 | 488 | 258 | 13 | 92 | 562 | 122 | 555 | 1.35e-71 | 239 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256660 | AT1G05590.2 | 63.509 | 570 | 192 | 9 | 5 | 567 | 15 | 575 | 0.0 | 749 |
| Msa0256660 | AT1G05590.3 | 63.509 | 570 | 192 | 9 | 5 | 567 | 15 | 575 | 0.0 | 749 |
| Msa0256660 | AT1G05590.1 | 63.509 | 570 | 192 | 9 | 5 | 567 | 15 | 575 | 0.0 | 749 |
| Msa0256660 | AT3G55260.1 | 30.000 | 590 | 328 | 16 | 2 | 562 | 5 | 538 | 1.40e-74 | 247 |
| Msa0256660 | AT1G65590.1 | 30.053 | 569 | 314 | 17 | 5 | 550 | 11 | 518 | 9.44e-73 | 242 |
Find 193 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAAAAGGGTTGTTGAATT+TGG | 0.169426 | 2_2:+51611586 | Msa0256660:CDS |
| GTTAATGATGTTGTTGTAAA+TGG | 0.193092 | 2_2:-51610932 | None:intergenic |
| TGCAAAATCACACGTTCTTT+AGG | 0.233450 | 2_2:-51613728 | None:intergenic |
| CCACGTGAGGTTTCTTGGTT+TGG | 0.247063 | 2_2:-51610963 | None:intergenic |
| TTGGTAGGTCTTGGGGTTTA+AGG | 0.248007 | 2_2:-51613444 | None:intergenic |
| GGGGACCACGTGAGGTTTCT+TGG | 0.257943 | 2_2:-51610968 | None:intergenic |
| ATACTGTTGATGATGTTAAA+AGG | 0.258337 | 2_2:+51611572 | Msa0256660:CDS |
| CTTCAGGACTTGGTAGGTCT+TGG | 0.272443 | 2_2:-51613453 | None:intergenic |
| TTAAAAGGGTTGTTGAATTT+GGG | 0.272932 | 2_2:+51611587 | Msa0256660:CDS |
| TACAATTATGATATAACTTA+TGG | 0.278390 | 2_2:+51613953 | Msa0256660:CDS |
| CAGAAATTTCTATCAAATAA+TGG | 0.278468 | 2_2:+51613575 | Msa0256660:CDS |
| GACAGAAGAAGAAGCGAAAT+TGG | 0.283858 | 2_2:+51613979 | Msa0256660:CDS |
| TGTGGACACGGCGACTTTAC+TGG | 0.284986 | 2_2:+51613842 | Msa0256660:CDS |
| TTCAGGACTTGGTAGGTCTT+GGG | 0.286707 | 2_2:-51613452 | None:intergenic |
| GTTGTTGTGGTGGGGAGTGG+TGG | 0.288384 | 2_2:-51611035 | None:intergenic |
| ACAAGCCGATGAAACTGTTT+TGG | 0.297680 | 2_2:+51614033 | Msa0256660:CDS |
| GCAAAATCACACGTTCTTTA+GGG | 0.300220 | 2_2:-51613727 | None:intergenic |
| ATGGACATGACAACACTAAA+AGG | 0.308012 | 2_2:+51613762 | Msa0256660:CDS |
| AGGTGCTTATGATGTTAATA+TGG | 0.311318 | 2_2:+51611546 | Msa0256660:CDS |
| AGGAGGGTGGTTTGCTGTGG+TGG | 0.311621 | 2_2:-51610989 | None:intergenic |
| TTCTGTGTTTGGGTTTGTTA+TGG | 0.314604 | 2_2:-51611179 | None:intergenic |
| GTGGGGAGTGGTGGTGGTGA+TGG | 0.317804 | 2_2:-51611026 | None:intergenic |
| GATAGAAATTTCTGAATTGT+TGG | 0.328121 | 2_2:-51613566 | None:intergenic |
| TTCAGCCACTTTGGTGTGTT+AGG | 0.329678 | 2_2:+51614209 | Msa0256660:CDS |
| CACGTGAGGTTTCTTGGTTT+GGG | 0.333166 | 2_2:-51610962 | None:intergenic |
| TGGTAGGTCTTGGGGTTTAA+GGG | 0.334909 | 2_2:-51613443 | None:intergenic |
| CATGCAATCTAGTTTGTGTT+TGG | 0.336777 | 2_2:+51614256 | Msa0256660:exon |
| GTTTCTTGGTTTGGGCCATA+TGG | 0.339373 | 2_2:-51610954 | None:intergenic |
| GGTTTGTTATGGTGATTGTT+AGG | 0.343519 | 2_2:-51611168 | None:intergenic |
| AAACTAACTACAAATGTGTT+TGG | 0.344012 | 2_2:-51614347 | None:intergenic |
| CCATGATGTTACGGCGGTTA+AGG | 0.356682 | 2_2:-51611257 | None:intergenic |
| GTTGTGGTGGGGAGTGGTGG+TGG | 0.368964 | 2_2:-51611032 | None:intergenic |
| TCCATTTGAGAGGAGGAGTT+TGG | 0.370764 | 2_2:-51614398 | None:intergenic |
| AGTCCTTGTGGTCAGGCAAT+AGG | 0.372077 | 2_2:+51614092 | Msa0256660:CDS |
| CCAGAATGGTAAAATTGTTC+CGG | 0.373560 | 2_2:-51613506 | None:intergenic |
| CAGCCGTAGTGTTGTCTATT+GGG | 0.377513 | 2_2:+51613658 | Msa0256660:CDS |
| GTGGTTGTTGTGGTGGGGAG+TGG | 0.381507 | 2_2:-51611038 | None:intergenic |
| ACACACCAAAGTGGCTGAAT+AGG | 0.386294 | 2_2:-51614205 | None:intergenic |
| GGTGAGGTGGTTGTTGTGGT+GGG | 0.390876 | 2_2:-51611044 | None:intergenic |
| TCGGCCATTGCAGAAGTTCT+AGG | 0.394283 | 2_2:-51614070 | None:intergenic |
| TCAGCCGTAGTGTTGTCTAT+TGG | 0.394316 | 2_2:+51613657 | Msa0256660:CDS |
| CGTGGTTTAGTTCTGTGTTT+GGG | 0.394615 | 2_2:-51611189 | None:intergenic |
| GGCTCTGCTGCAAGACGATC+TGG | 0.396431 | 2_2:-51613401 | None:intergenic |
| TTGGCACATGTTACAATGTC+AGG | 0.396766 | 2_2:-51613347 | None:intergenic |
| GCGTGGTTTAGTTCTGTGTT+TGG | 0.399321 | 2_2:-51611190 | None:intergenic |
| GGAGGGTGGTTTGCTGTGGT+GGG | 0.404772 | 2_2:-51610988 | None:intergenic |
| CAACAACATCATTAACCATA+TGG | 0.405994 | 2_2:+51610939 | Msa0256660:CDS |
| TAACATGTGCCAACATGTTC+TGG | 0.407324 | 2_2:+51613357 | Msa0256660:CDS |
| TTGGGTTACCCCATGCAAGC+TGG | 0.408630 | 2_2:-51611309 | None:intergenic |
| ATGAAGTCATACCAGGTTGC+TGG | 0.409988 | 2_2:+51613534 | Msa0256660:CDS |
| ACATTTGTAGTTAGTTTAGT+TGG | 0.411993 | 2_2:+51614353 | Msa0256660:three_prime_UTR |
| CTTGCAGCAGAGCCGGGAAC+AGG | 0.412551 | 2_2:+51613410 | Msa0256660:CDS |
| CGACGTAACCACATTGTTCC+CGG | 0.424036 | 2_2:+51613487 | Msa0256660:CDS |
| GTCCTTGTGGTCAGGCAATA+GGG | 0.424403 | 2_2:+51614093 | Msa0256660:CDS |
| GTCAGGCAATAGGGATGAAA+AGG | 0.425841 | 2_2:+51614102 | Msa0256660:CDS |
| GGATTTAAATGACCTGTTCC+CGG | 0.426058 | 2_2:-51613422 | None:intergenic |
| ACGATCTGGCCAATCGCTTC+CGG | 0.428599 | 2_2:-51613387 | None:intergenic |
| CGTTCACAGCCACGCGCGTT+GGG | 0.429962 | 2_2:-51611327 | None:intergenic |
| AGAATGGTGAGTAGAGGTAT+AGG | 0.430719 | 2_2:+51614175 | Msa0256660:CDS |
| TTGTTTGAGAGGTTTGCTTT+TGG | 0.431102 | 2_2:-51611127 | None:intergenic |
| AGATCGTCTTGCAGCAGAGC+CGG | 0.431541 | 2_2:+51613403 | Msa0256660:CDS |
| GGAAACGCAGTGCAAATATC+AGG | 0.437816 | 2_2:-51614326 | None:intergenic |
| TGTGATATTAAGTGCCCGTT+TGG | 0.439207 | 2_2:-51610758 | None:intergenic |
| GAGGTTTGTGTAGCGGGATA+TGG | 0.441404 | 2_2:-51611071 | None:intergenic |
| TAACCAGGGGCATCAATCTC+AGG | 0.441601 | 2_2:-51611634 | None:intergenic |
| TTCATATATGCAGGGCATAC+AGG | 0.441868 | 2_2:+51613305 | Msa0256660:intron |
| GGTTAAGGTGGCGGTGGGAG+TGG | 0.441963 | 2_2:-51611242 | None:intergenic |
| TACTGTTGATGATGTTAAAA+GGG | 0.444020 | 2_2:+51611573 | Msa0256660:CDS |
| CAGAATGGTAAAATTGTTCC+GGG | 0.446032 | 2_2:-51613505 | None:intergenic |
| CGGTGAGGTGGTTGTTGTGG+TGG | 0.447344 | 2_2:-51611045 | None:intergenic |
| ATAAGTTGAATGTGTTTCAT+TGG | 0.450469 | 2_2:+51611461 | Msa0256660:CDS |
| GTTAACGACGCGCCGTTGTT+CGG | 0.450523 | 2_2:+51611355 | Msa0256660:CDS |
| CAACAGATAGATTGAATGAA+TGG | 0.452558 | 2_2:+51614146 | Msa0256660:CDS |
| ATGGCCGAGTCCTTGTGGTC+AGG | 0.454812 | 2_2:+51614085 | Msa0256660:CDS |
| CCTTAACCGCCGTAACATCA+TGG | 0.457698 | 2_2:+51611257 | Msa0256660:CDS |
| CTGAGCCTATTCAGCCACTT+TGG | 0.459740 | 2_2:+51614200 | Msa0256660:CDS |
| TCTTCCTTCTGAACCAATGT+TGG | 0.465853 | 2_2:+51611516 | Msa0256660:CDS |
| ACCAAACTCCTCCTCTCAAA+TGG | 0.466701 | 2_2:+51614397 | Msa0256660:three_prime_UTR |
| TACGGCGGTTAAGGTGGCGG+TGG | 0.468499 | 2_2:-51611248 | None:intergenic |
| TGATAAACGTCTCAAGGACT+TGG | 0.468796 | 2_2:-51613607 | None:intergenic |
| GAGGTGGTAGATTGTTTGAG+AGG | 0.470369 | 2_2:-51611138 | None:intergenic |
| GTTCTTAACAAATCCTTCAC+TGG | 0.470542 | 2_2:-51611418 | None:intergenic |
| TTTGATGAGGTTTGTGTAGC+GGG | 0.472532 | 2_2:-51611077 | None:intergenic |
| GATCGTCTTGCAGCAGAGCC+GGG | 0.472821 | 2_2:+51613404 | Msa0256660:CDS |
| AGTATTTACGACAACCAAAC+AGG | 0.473889 | 2_2:+51613872 | Msa0256660:CDS |
| GTATGACATTCTTCAGGACT+TGG | 0.473967 | 2_2:-51613463 | None:intergenic |
| CATGGCTCCCCATGATGTTA+CGG | 0.474318 | 2_2:-51611266 | None:intergenic |
| ACTAAAAGGATAGTATCTTC+TGG | 0.481580 | 2_2:+51613776 | Msa0256660:CDS |
| TCAGGACTTGGTAGGTCTTG+GGG | 0.482867 | 2_2:-51613451 | None:intergenic |
| CGTCGCGTATGACATTCTTC+AGG | 0.483873 | 2_2:-51613469 | None:intergenic |
| TGCTGCCACCACACATCTCT+CGG | 0.486152 | 2_2:+51614294 | Msa0256660:three_prime_UTR |
| AGTTATCAAACAATGTTACA+TGG | 0.486179 | 2_2:+51614529 | Msa0256660:three_prime_UTR |
| GAGAGGAGGGTGGTTTGCTG+TGG | 0.488969 | 2_2:-51610992 | None:intergenic |
| ATGCAGGGCATACAGGATCA+TGG | 0.495303 | 2_2:+51613312 | Msa0256660:intron |
| AACATGTTCTGGTGGCCAGC+CGG | 0.496165 | 2_2:+51613368 | Msa0256660:CDS |
| GGTGGCCAGCCGGAAGCGAT+TGG | 0.500162 | 2_2:+51613378 | Msa0256660:CDS |
| AAACGTTCTCCCAGCTTGCA+TGG | 0.501443 | 2_2:+51611299 | Msa0256660:CDS |
| TATTCAAAGCTGAACCAAAC+GGG | 0.501943 | 2_2:+51610744 | Msa0256660:five_prime_UTR |
| AGAAGCAGAATGGTGAGTAG+AGG | 0.507345 | 2_2:+51614169 | Msa0256660:CDS |
| TGTACTGTGTTGCACATACC+AGG | 0.508347 | 2_2:-51614235 | None:intergenic |
| ACGTTCACAGCCACGCGCGT+TGG | 0.511117 | 2_2:-51611328 | None:intergenic |
| TCTGGCCAATCGCTTCCGGC+TGG | 0.511465 | 2_2:-51613383 | None:intergenic |
| AACGTTCTCCCAGCTTGCAT+GGG | 0.511724 | 2_2:+51611300 | Msa0256660:CDS |
| CGGCGGTGAGGTGGTTGTTG+TGG | 0.512974 | 2_2:-51611048 | None:intergenic |
| TTGCCTGAGATTGATGCCCC+TGG | 0.515896 | 2_2:+51611631 | Msa0256660:CDS |
| CTTTGGTGTGTTAGGAACCC+TGG | 0.519125 | 2_2:+51614217 | Msa0256660:CDS |
| ATATTCAAAGCTGAACCAAA+CGG | 0.519762 | 2_2:+51610743 | Msa0256660:five_prime_UTR |
| GGGATATGGCGGCGGTGAGG+TGG | 0.520549 | 2_2:-51611057 | None:intergenic |
| TGGGTTACCCCATGCAAGCT+GGG | 0.521522 | 2_2:-51611308 | None:intergenic |
| GAGGGTGGTTTGCTGTGGTG+GGG | 0.521555 | 2_2:-51610987 | None:intergenic |
| TATTATCTTGACTGTGGACA+CGG | 0.524989 | 2_2:+51613830 | Msa0256660:CDS |
| CTTAACCGCCGTAACATCAT+GGG | 0.525471 | 2_2:+51611258 | Msa0256660:CDS |
| GGGGATGATGTCATGAGGAT+AGG | 0.525811 | 2_2:-51610781 | None:intergenic |
| ATTGTTAGGCTTTGTAGAGG+TGG | 0.527815 | 2_2:-51611154 | None:intergenic |
| ACGGCGGTTAAGGTGGCGGT+GGG | 0.529744 | 2_2:-51611247 | None:intergenic |
| TGTGTGTGTGGTATTTATGG+AGG | 0.533895 | 2_2:-51610815 | None:intergenic |
| TTATGGAGGATCTGCATGGT+GGG | 0.534341 | 2_2:-51610801 | None:intergenic |
| CGGCTGAGGGATAAAATGAA+AGG | 0.538476 | 2_2:-51613641 | None:intergenic |
| AATAGACAACACTACGGCTG+AGG | 0.539538 | 2_2:-51613655 | None:intergenic |
| ATCCCTATTGCCTGACCACA+AGG | 0.540723 | 2_2:-51614095 | None:intergenic |
| TCAGCCAACATTGGTTCAGA+AGG | 0.540910 | 2_2:-51611520 | None:intergenic |
| GTGAGGTGGTTGTTGTGGTG+GGG | 0.541233 | 2_2:-51611043 | None:intergenic |
| TGAATCCAAAACAGTTTCAT+CGG | 0.545316 | 2_2:-51614038 | None:intergenic |
| GTGGTGGTGATGGTGAATGT+TGG | 0.547097 | 2_2:-51611016 | None:intergenic |
| AAATTTCTGAATTGTTGGAT+CGG | 0.547169 | 2_2:-51613561 | None:intergenic |
| TGATGTTACGGCGGTTAAGG+TGG | 0.555917 | 2_2:-51611254 | None:intergenic |
| TGCAGGGCATACAGGATCAT+GGG | 0.555993 | 2_2:+51613313 | Msa0256660:intron |
| TGTTAACGTGTAGGATTCGT+CGG | 0.556768 | 2_2:-51611215 | None:intergenic |
| GTGATTGTTAGGCTTTGTAG+AGG | 0.558614 | 2_2:-51611157 | None:intergenic |
| TTGTTGTAAATGGAAAGAAC+AGG | 0.559979 | 2_2:-51610922 | None:intergenic |
| GGTGAATGTTGGAGAGAGGA+GGG | 0.562121 | 2_2:-51611005 | None:intergenic |
| TACAATGTCAGGGTAGGCTA+AGG | 0.562452 | 2_2:-51613336 | None:intergenic |
| CTGCAATGGCCGAGTCCTTG+TGG | 0.564142 | 2_2:+51614080 | Msa0256660:CDS |
| AACGATGGAGGCTCTTGGTG+TGG | 0.565005 | 2_2:+51613905 | Msa0256660:CDS |
| GCACCTTTCTCAGCCAACAT+TGG | 0.566807 | 2_2:-51611529 | None:intergenic |
| GGCTGAGGGATAAAATGAAA+GGG | 0.571586 | 2_2:-51613640 | None:intergenic |
| GAACCAATGTTGGCTGAGAA+AGG | 0.574287 | 2_2:+51611526 | Msa0256660:CDS |
| GGAGAATCGTCGATGGAACA+TGG | 0.579419 | 2_2:-51613706 | None:intergenic |
| TGACTTCATCAGCACCAGAA+TGG | 0.580722 | 2_2:-51613520 | None:intergenic |
| TGTTACGGCGGTTAAGGTGG+CGG | 0.581510 | 2_2:-51611251 | None:intergenic |
| ACATCATGGGGAGCCATGCA+TGG | 0.583969 | 2_2:+51611271 | Msa0256660:CDS |
| TGTTGTTGATAAACGTCTCA+AGG | 0.587054 | 2_2:-51613613 | None:intergenic |
| TGTAGGATTCGTCGGTGGCG+TGG | 0.587511 | 2_2:-51611207 | None:intergenic |
| TTGGCCTAGAACTTCTGCAA+TGG | 0.591317 | 2_2:+51614066 | Msa0256660:CDS |
| AGCGGGATATGGCGGCGGTG+AGG | 0.591665 | 2_2:-51611060 | None:intergenic |
| GAATGTTGGAGAGAGGAGGG+TGG | 0.593591 | 2_2:-51611002 | None:intergenic |
| ATGGGGTAACCCAACGCGCG+TGG | 0.594235 | 2_2:+51611318 | Msa0256660:CDS |
| GTGATTGAGTTGTGTGTGTG+TGG | 0.596762 | 2_2:-51610827 | None:intergenic |
| GGTTCAGAAGGAAGAACCAA+AGG | 0.598328 | 2_2:-51611508 | None:intergenic |
| TTTATGGAGGATCTGCATGG+TGG | 0.601807 | 2_2:-51610802 | None:intergenic |
| GAACGTTTCTAAACCATGCA+TGG | 0.602700 | 2_2:-51611284 | None:intergenic |
| TGTGTAGCGGGATATGGCGG+CGG | 0.603486 | 2_2:-51611065 | None:intergenic |
| ATAGACAACACTACGGCTGA+GGG | 0.605776 | 2_2:-51613654 | None:intergenic |
| GACTTCTATTATCTTGACTG+TGG | 0.608516 | 2_2:+51613824 | Msa0256660:CDS |
| GCTGTGGTGGGGACCACGTG+AGG | 0.610942 | 2_2:-51610976 | None:intergenic |
| GGTGCTGATGAAGTCATACC+AGG | 0.611082 | 2_2:+51613527 | Msa0256660:CDS |
| GTTGAATTTGGGCTTGATCG+TGG | 0.612314 | 2_2:+51611598 | Msa0256660:CDS |
| GACATTCTTCAGGACTTGGT+AGG | 0.615332 | 2_2:-51613459 | None:intergenic |
| TGGTGAATGTTGGAGAGAGG+AGG | 0.616473 | 2_2:-51611006 | None:intergenic |
| AGTGGTGATTGTTAACGTGT+AGG | 0.617469 | 2_2:-51611224 | None:intergenic |
| GTTTGTGTAGCGGGATATGG+CGG | 0.619231 | 2_2:-51611068 | None:intergenic |
| TATGGAGGATCTGCATGGTG+GGG | 0.620982 | 2_2:-51610800 | None:intergenic |
| ACATGTTACAATGTCAGGGT+AGG | 0.624886 | 2_2:-51613342 | None:intergenic |
| AAGAAACTACTATCCAGTGA+AGG | 0.628905 | 2_2:+51611405 | Msa0256660:CDS |
| TCAGGCAATAGGGATGAAAA+GGG | 0.628998 | 2_2:+51614103 | Msa0256660:CDS |
| GAATGAATGGAGAAGCAGAA+TGG | 0.631006 | 2_2:+51614159 | Msa0256660:CDS |
| ATTGCCTGACCACAAGGACT+CGG | 0.642760 | 2_2:-51614089 | None:intergenic |
| TGATGGTGAATGTTGGAGAG+AGG | 0.643394 | 2_2:-51611009 | None:intergenic |
| GTATTTATGGAGGATCTGCA+TGG | 0.644865 | 2_2:-51610805 | None:intergenic |
| GGGTCTGAAGCGATACGCAG+AGG | 0.646523 | 2_2:+51614123 | Msa0256660:CDS |
| TGGCACATGTTACAATGTCA+GGG | 0.649183 | 2_2:-51613346 | None:intergenic |
| CTGATGATGACACGATGGCG+CGG | 0.650072 | 2_2:-51613802 | None:intergenic |
| TCTTTAGGGAGAATCGTCGA+TGG | 0.663881 | 2_2:-51613713 | None:intergenic |
| GGCTGGCCACCAGAACATGT+TGG | 0.664388 | 2_2:-51613366 | None:intergenic |
| TAACATGATTGTGTTGTGTG+AGG | 0.664398 | 2_2:-51610879 | None:intergenic |
| GGCTCCCCATGATGTTACGG+CGG | 0.666239 | 2_2:-51611263 | None:intergenic |
| ACGTTCTCCCAGCTTGCATG+GGG | 0.667335 | 2_2:+51611301 | Msa0256660:CDS |
| CTTCCCAATAGACAACACTA+CGG | 0.673137 | 2_2:-51613661 | None:intergenic |
| ATACCGCGATGACCGAACAA+CGG | 0.676103 | 2_2:-51611367 | None:intergenic |
| GGGTTCCTAACACACCAAAG+TGG | 0.684872 | 2_2:-51614214 | None:intergenic |
| TAACGTGTAGGATTCGTCGG+TGG | 0.686353 | 2_2:-51611212 | None:intergenic |
| CATGTGCCAACATGTTCTGG+TGG | 0.695959 | 2_2:+51613360 | Msa0256660:CDS |
| TAGGTGGGGAGGTAGCATTG+TGG | 0.697913 | 2_2:+51614005 | Msa0256660:CDS |
| ACGGTCCGAGAGATGTGTGG+TGG | 0.700022 | 2_2:-51614299 | None:intergenic |
| TTAACCGCCGTAACATCATG+GGG | 0.700936 | 2_2:+51611259 | Msa0256660:CDS |
| CACACGGTCCGAGAGATGTG+TGG | 0.702220 | 2_2:-51614302 | None:intergenic |
| GAAGTCTGATGATGACACGA+TGG | 0.708731 | 2_2:-51613807 | None:intergenic |
| AGTGCAAATATCAGGACACA+CGG | 0.711471 | 2_2:-51614318 | None:intergenic |
| CCAAACCAAGAAACCTCACG+TGG | 0.715513 | 2_2:+51610963 | Msa0256660:CDS |
| GCGCCGTTGTTCGGTCATCG+CGG | 0.720028 | 2_2:+51611364 | Msa0256660:CDS |
| GTACTGTGTTGCACATACCA+GGG | 0.730881 | 2_2:-51614234 | None:intergenic |
| AAATTGTTCCGGGAACAATG+TGG | 0.768274 | 2_2:-51613495 | None:intergenic |
| ATGGTGGGGATGATGTCATG+AGG | 0.772356 | 2_2:-51610786 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAAATCAATAAATTAA+AGG | - | chr2_2:51611675-51611694 | None:intergenic | 10.0% |
| !! | TTAATATAAACCAAAATAAA+AGG | - | chr2_2:51613038-51613057 | None:intergenic | 10.0% |
| !! | ATTAAATTAACAAAAAAATG+AGG | + | chr2_2:51613192-51613211 | Msa0256660:intron | 10.0% |
| !!! | ATTTTATTTTACTTTTAATC+TGG | + | chr2_2:51614443-51614462 | Msa0256660:three_prime_UTR | 10.0% |
| !!! | TATTTTGTTTGTAGTAAATT+AGG | - | chr2_2:51612258-51612277 | None:intergenic | 15.0% |
| !!! | TTTCTTCTTCTTTTATTATT+TGG | + | chr2_2:51612526-51612545 | Msa0256660:intron | 15.0% |
| !!! | TATACTTTTTTTTTTTCTTG+TGG | + | chr2_2:51612922-51612941 | Msa0256660:intron | 15.0% |
| !!! | ATACTTTTTTTTTTTCTTGT+GGG | + | chr2_2:51612923-51612942 | Msa0256660:intron | 15.0% |
| !! | TATATAAATTTCATATATGC+AGG | + | chr2_2:51613296-51613315 | Msa0256660:intron | 15.0% |
| !! | ATATAAATTTCATATATGCA+GGG | + | chr2_2:51613297-51613316 | Msa0256660:intron | 15.0% |
| !! | TACAATTATGATATAACTTA+TGG | + | chr2_2:51613953-51613972 | Msa0256660:CDS | 15.0% |
| !! | ATGATTAAAAAAGACATGTT+TGG | + | chr2_2:51611922-51611941 | Msa0256660:intron | 20.0% |
| !! | TCATAGCTTATTACATTTAT+CGG | + | chr2_2:51612009-51612028 | Msa0256660:intron | 20.0% |
| !! | AAAAAGTTAGAACATGTAAA+TGG | + | chr2_2:51612306-51612325 | Msa0256660:intron | 20.0% |
| !! | TCTATAAATTAAAGTTTGGA+CGG | - | chr2_2:51612486-51612505 | None:intergenic | 20.0% |
| !! | CCTTTCTATAAATTAAAGTT+TGG | - | chr2_2:51612490-51612509 | None:intergenic | 20.0% |
| !!! | CCAAACTTTAATTTATAGAA+AGG | + | chr2_2:51612487-51612506 | Msa0256660:intron | 20.0% |
| !! | AATTTATAGAAAGGAAAAGT+TGG | + | chr2_2:51612496-51612515 | Msa0256660:intron | 20.0% |
| !! | ATTTATAGAAAGGAAAAGTT+GGG | + | chr2_2:51612497-51612516 | Msa0256660:intron | 20.0% |
| !! | AACAAATTTCCAATAAAAGA+AGG | - | chr2_2:51612670-51612689 | None:intergenic | 20.0% |
| !! | CATAGAAAAGTAACAATTAT+AGG | + | chr2_2:51613068-51613087 | Msa0256660:intron | 20.0% |
| !! | TATTAAAATGAACTCTAAGT+TGG | + | chr2_2:51613106-51613125 | Msa0256660:intron | 20.0% |
| !! | CAGAAATTTCTATCAAATAA+TGG | + | chr2_2:51613575-51613594 | Msa0256660:CDS | 20.0% |
| !!! | CAAAACAATAAATTTTCAGT+AGG | - | chr2_2:51614495-51614514 | None:intergenic | 20.0% |
| !!! | CTGAAAATTTATTGTTTTGT+TGG | + | chr2_2:51614496-51614515 | Msa0256660:three_prime_UTR | 20.0% |
| ! | GTTAATGATGTTGTTGTAAA+TGG | - | chr2_2:51610935-51610954 | None:intergenic | 25.0% |
| !! | ATAAGTTGAATGTGTTTCAT+TGG | + | chr2_2:51611461-51611480 | Msa0256660:CDS | 25.0% |
| !!! | ATACTGTTGATGATGTTAAA+AGG | + | chr2_2:51611572-51611591 | Msa0256660:CDS | 25.0% |
| !!! | TACTGTTGATGATGTTAAAA+GGG | + | chr2_2:51611573-51611592 | Msa0256660:CDS | 25.0% |
| ! | TTAAAAGGGTTGTTGAATTT+GGG | + | chr2_2:51611587-51611606 | Msa0256660:CDS | 25.0% |
| ! | AAAAAAAACAGAACTAACCA+GGG | - | chr2_2:51611651-51611670 | None:intergenic | 25.0% |
| !!! | TGTTTTGAAAAAAGTGCTTT+CGG | + | chr2_2:51611728-51611747 | Msa0256660:intron | 25.0% |
| !! | TAGAGTTGTAGTTACATTTT+CGG | + | chr2_2:51611845-51611864 | Msa0256660:intron | 25.0% |
| !!! | GAAGTTATAAGCTAGTTTTA+TGG | - | chr2_2:51611886-51611905 | None:intergenic | 25.0% |
| ! | TTATAGCTAATGACTAATGA+CGG | - | chr2_2:51612085-51612104 | None:intergenic | 25.0% |
| ! | AAGGTAATGAATCAAATGTA+AGG | - | chr2_2:51612135-51612154 | None:intergenic | 25.0% |
| ! | CAGTAATATCATGAATAGTA+TGG | + | chr2_2:51612170-51612189 | Msa0256660:intron | 25.0% |
| ! | AACATGTAAATGGTTTGATA+AGG | + | chr2_2:51612316-51612335 | Msa0256660:intron | 25.0% |
| ! | CTATAAATTAAAGTTTGGAC+GGG | - | chr2_2:51612485-51612504 | None:intergenic | 25.0% |
| ! | TTAATTGATTAATTCAGTGC+TGG | - | chr2_2:51612620-51612639 | None:intergenic | 25.0% |
| ! | ATCAATTAATTTATTGCCCT+TGG | + | chr2_2:51612631-51612650 | Msa0256660:intron | 25.0% |
| !!! | TTTAGTATTCTAGAATGTGA+TGG | - | chr2_2:51612802-51612821 | None:intergenic | 25.0% |
| !!! | ATCTCTGTTTTTTAAGATGT+TGG | + | chr2_2:51612862-51612881 | Msa0256660:intron | 25.0% |
| ! | AAGAGTGATTCTAAGTTATA+GGG | - | chr2_2:51613008-51613027 | None:intergenic | 25.0% |
| !!! | CTTCAAATCTCCTTTTATTT+TGG | + | chr2_2:51613025-51613044 | Msa0256660:intron | 25.0% |
| ! | AGTAACAATTATAGGAGTTA+TGG | + | chr2_2:51613076-51613095 | Msa0256660:intron | 25.0% |
| ! | CAATAACATTGTAACCATAT+GGG | + | chr2_2:51613167-51613186 | Msa0256660:intron | 25.0% |
| ! | TGTTAATTTAATTGCCCATA+TGG | - | chr2_2:51613184-51613203 | None:intergenic | 25.0% |
| !!! | AAAAACAGAATTCTAAAGTC+AGG | - | chr2_2:51613232-51613251 | None:intergenic | 25.0% |
| ! | AAATTTCTGAATTGTTGGAT+CGG | - | chr2_2:51613564-51613583 | None:intergenic | 25.0% |
| ! | GATAGAAATTTCTGAATTGT+TGG | - | chr2_2:51613569-51613588 | None:intergenic | 25.0% |
| !!! | ATAGTTTGCCATGTTTTAAA+AGG | - | chr2_2:51613932-51613951 | None:intergenic | 25.0% |
| ! | AAACTAACTACAAATGTGTT+TGG | - | chr2_2:51614350-51614369 | None:intergenic | 25.0% |
| !! | ACATTTGTAGTTAGTTTAGT+TGG | + | chr2_2:51614353-51614372 | Msa0256660:three_prime_UTR | 25.0% |
| ! | AGTTATCAAACAATGTTACA+TGG | + | chr2_2:51614529-51614548 | Msa0256660:three_prime_UTR | 25.0% |
| ATATTCAAAGCTGAACCAAA+CGG | + | chr2_2:51610743-51610762 | Msa0256660:five_prime_UTR | 30.0% | |
| TTGTTGTAAATGGAAAGAAC+AGG | - | chr2_2:51610925-51610944 | None:intergenic | 30.0% | |
| CAACAACATCATTAACCATA+TGG | + | chr2_2:51610939-51610958 | Msa0256660:CDS | 30.0% | |
| ! | AGATTCTCATTCTTTTCCTT+TGG | + | chr2_2:51611492-51611511 | Msa0256660:CDS | 30.0% |
| AGGTGCTTATGATGTTAATA+TGG | + | chr2_2:51611546-51611565 | Msa0256660:CDS | 30.0% | |
| GTTAAAAGGGTTGTTGAATT+TGG | + | chr2_2:51611586-51611605 | Msa0256660:CDS | 30.0% | |
| AAAAAAACAGAACTAACCAG+GGG | - | chr2_2:51611650-51611669 | None:intergenic | 30.0% | |
| CAAAAAAAACAGAACTAACC+AGG | - | chr2_2:51611652-51611671 | None:intergenic | 30.0% | |
| !!! | TTACATTTTCGGCTTTGTTT+GGG | + | chr2_2:51611856-51611875 | Msa0256660:intron | 30.0% |
| TATAAGCTCGTGATAAATGT+CGG | - | chr2_2:51611951-51611970 | None:intergenic | 30.0% | |
| !! | ATCAAATGTAAGGCTTTGTT+TGG | - | chr2_2:51612125-51612144 | None:intergenic | 30.0% |
| ! | ACTGCTCGAAAGATATTTTA+AGG | - | chr2_2:51612154-51612173 | None:intergenic | 30.0% |
| GAAAAAAAATTCTAACCCTC+CGG | + | chr2_2:51612192-51612211 | Msa0256660:intron | 30.0% | |
| ! | GAAAAGGTATACTCAAGTAA+TGG | + | chr2_2:51612218-51612237 | Msa0256660:intron | 30.0% |
| CTACAAACAAAATATGACTG+AGG | + | chr2_2:51612264-51612283 | Msa0256660:intron | 30.0% | |
| ! | ATTACTCTGCCTTCTTTTAT+TGG | + | chr2_2:51612658-51612677 | Msa0256660:intron | 30.0% |
| ATGCGACATATAATAAGTGA+TGG | - | chr2_2:51612835-51612854 | None:intergenic | 30.0% | |
| GAAGAGTGATTCTAAGTTAT+AGG | - | chr2_2:51613009-51613028 | None:intergenic | 30.0% | |
| AATTATAGGAGTTATGGTGT+TGG | + | chr2_2:51613082-51613101 | Msa0256660:intron | 30.0% | |
| GCAATAACATTGTAACCATA+TGG | + | chr2_2:51613166-51613185 | Msa0256660:intron | 30.0% | |
| ACTAAAAGGATAGTATCTTC+TGG | + | chr2_2:51613776-51613795 | Msa0256660:CDS | 30.0% | |
| TGAATCCAAAACAGTTTCAT+CGG | - | chr2_2:51614041-51614060 | None:intergenic | 30.0% | |
| !! | ATGAAACTGTTTTGGATTCA+CGG | + | chr2_2:51614041-51614060 | Msa0256660:CDS | 30.0% |
| CAACAGATAGATTGAATGAA+TGG | + | chr2_2:51614146-51614165 | Msa0256660:CDS | 30.0% | |
| TATTCAAAGCTGAACCAAAC+GGG | + | chr2_2:51610744-51610763 | Msa0256660:five_prime_UTR | 35.0% | |
| TTGTGTGTGTGTGGTATTTA+TGG | - | chr2_2:51610821-51610840 | None:intergenic | 35.0% | |
| TAACATGATTGTGTTGTGTG+AGG | - | chr2_2:51610882-51610901 | None:intergenic | 35.0% | |
| ! | TTTTGATGAGGTTTGTGTAG+CGG | - | chr2_2:51611081-51611100 | None:intergenic | 35.0% |
| !!! | TGTTGTGTTCTGTTTTGATG+AGG | - | chr2_2:51611093-51611112 | None:intergenic | 35.0% |
| !! | TTTGCTTTTGGTGGGATTAA+GGG | - | chr2_2:51611118-51611137 | None:intergenic | 35.0% |
| !! | TTGTTTGAGAGGTTTGCTTT+TGG | - | chr2_2:51611130-51611149 | None:intergenic | 35.0% |
| !! | GGTTTGTTATGGTGATTGTT+AGG | - | chr2_2:51611171-51611190 | None:intergenic | 35.0% |
| !! | TTCTGTGTTTGGGTTTGTTA+TGG | - | chr2_2:51611182-51611201 | None:intergenic | 35.0% |
| AAGAAACTACTATCCAGTGA+AGG | + | chr2_2:51611405-51611424 | Msa0256660:CDS | 35.0% | |
| GTTCTTAACAAATCCTTCAC+TGG | - | chr2_2:51611421-51611440 | None:intergenic | 35.0% | |
| TGTGATTAGAGAGTGATGAA+AGG | + | chr2_2:51611704-51611723 | Msa0256660:intron | 35.0% | |
| !! | TTTGAAAAAAGTGCTTTCGG+TGG | + | chr2_2:51611731-51611750 | Msa0256660:intron | 35.0% |
| !!! | GTTACATTTTCGGCTTTGTT+TGG | + | chr2_2:51611855-51611874 | Msa0256660:intron | 35.0% |
| TTGCATATTCCACACAAACA+AGG | - | chr2_2:51612397-51612416 | None:intergenic | 35.0% | |
| ! | AATTAAAGTTTGGACGGGTT+TGG | - | chr2_2:51612480-51612499 | None:intergenic | 35.0% |
| TGTATTTGTCTAGCACTTTG+CGG | + | chr2_2:51612562-51612581 | Msa0256660:intron | 35.0% | |
| AGGCAGAGTAATAATACCAA+GGG | - | chr2_2:51612650-51612669 | None:intergenic | 35.0% | |
| AAGGCAGAGTAATAATACCA+AGG | - | chr2_2:51612651-51612670 | None:intergenic | 35.0% | |
| !! | GATGTTGGTTTCTGAAATGT+TGG | + | chr2_2:51612877-51612896 | Msa0256660:intron | 35.0% |
| GGTTACAATGTTATTGCTCA+TGG | - | chr2_2:51613163-51613182 | None:intergenic | 35.0% | |
| CAGAATGGTAAAATTGTTCC+GGG | - | chr2_2:51613508-51613527 | None:intergenic | 35.0% | |
| CCAGAATGGTAAAATTGTTC+CGG | - | chr2_2:51613509-51613528 | None:intergenic | 35.0% | |
| ! | TGTTGTTGATAAACGTCTCA+AGG | - | chr2_2:51613616-51613635 | None:intergenic | 35.0% |
| GCAAAATCACACGTTCTTTA+GGG | - | chr2_2:51613730-51613749 | None:intergenic | 35.0% | |
| TGCAAAATCACACGTTCTTT+AGG | - | chr2_2:51613731-51613750 | None:intergenic | 35.0% | |
| ! | ATTTTGCAGACATGGAACAA+TGG | + | chr2_2:51613743-51613762 | Msa0256660:CDS | 35.0% |
| ATGGACATGACAACACTAAA+AGG | + | chr2_2:51613762-51613781 | Msa0256660:CDS | 35.0% | |
| GACTTCTATTATCTTGACTG+TGG | + | chr2_2:51613824-51613843 | Msa0256660:CDS | 35.0% | |
| TATTATCTTGACTGTGGACA+CGG | + | chr2_2:51613830-51613849 | Msa0256660:CDS | 35.0% | |
| AGTATTTACGACAACCAAAC+AGG | + | chr2_2:51613872-51613891 | Msa0256660:CDS | 35.0% | |
| !!! | GAAGAAGCGAAATTGGTTTT+AGG | + | chr2_2:51613986-51614005 | Msa0256660:CDS | 35.0% |
| !!! | AAGCGAAATTGGTTTTAGGT+GGG | + | chr2_2:51613990-51614009 | Msa0256660:CDS | 35.0% |
| ! | CATGCAATCTAGTTTGTGTT+TGG | + | chr2_2:51614256-51614275 | Msa0256660:exon | 35.0% |
| ! | TAGCTCTTTTTCCATTTGAG+AGG | - | chr2_2:51614411-51614430 | None:intergenic | 35.0% |
| TGTGATATTAAGTGCCCGTT+TGG | - | chr2_2:51610761-51610780 | None:intergenic | 40.0% | |
| GTATTTATGGAGGATCTGCA+TGG | - | chr2_2:51610808-51610827 | None:intergenic | 40.0% | |
| TGTGTGTGTGGTATTTATGG+AGG | - | chr2_2:51610818-51610837 | None:intergenic | 40.0% | |
| TTTGATGAGGTTTGTGTAGC+GGG | - | chr2_2:51611080-51611099 | None:intergenic | 40.0% | |
| !! | GTTTGCTTTTGGTGGGATTA+AGG | - | chr2_2:51611119-51611138 | None:intergenic | 40.0% |
| !! | TTGAGAGGTTTGCTTTTGGT+GGG | - | chr2_2:51611126-51611145 | None:intergenic | 40.0% |
| !! | TTTGAGAGGTTTGCTTTTGG+TGG | - | chr2_2:51611127-51611146 | None:intergenic | 40.0% |
| ! | ATTGTTAGGCTTTGTAGAGG+TGG | - | chr2_2:51611157-51611176 | None:intergenic | 40.0% |
| ! | GTGATTGTTAGGCTTTGTAG+AGG | - | chr2_2:51611160-51611179 | None:intergenic | 40.0% |
| !! | CGTGGTTTAGTTCTGTGTTT+GGG | - | chr2_2:51611192-51611211 | None:intergenic | 40.0% |
| TGTTAACGTGTAGGATTCGT+CGG | - | chr2_2:51611218-51611237 | None:intergenic | 40.0% | |
| AGTGGTGATTGTTAACGTGT+AGG | - | chr2_2:51611227-51611246 | None:intergenic | 40.0% | |
| GAACGTTTCTAAACCATGCA+TGG | - | chr2_2:51611287-51611306 | None:intergenic | 40.0% | |
| TCTTCCTTCTGAACCAATGT+TGG | + | chr2_2:51611516-51611535 | Msa0256660:CDS | 40.0% | |
| !! | CATAGGCTAACAGAAGTGTT+GGG | - | chr2_2:51612056-51612075 | None:intergenic | 40.0% |
| ! | TCATAGGCTAACAGAAGTGT+TGG | - | chr2_2:51612057-51612076 | None:intergenic | 40.0% |
| !! | ACTAATGACGGATGACTCAT+AGG | - | chr2_2:51612073-51612092 | None:intergenic | 40.0% |
| ! | TTGAGTATACCTTTTCCAGC+CGG | - | chr2_2:51612214-51612233 | None:intergenic | 40.0% |
| CAAGGTTCTCATGTAGGTAA+CGG | - | chr2_2:51612379-51612398 | None:intergenic | 40.0% | |
| CACAAACAAGGTTCTCATGT+AGG | - | chr2_2:51612385-51612404 | None:intergenic | 40.0% | |
| ! | ACATGAGAACCTTGTTTGTG+TGG | + | chr2_2:51612385-51612404 | Msa0256660:intron | 40.0% |
| TAGAGTCAGGAAAAACTTCG+AGG | - | chr2_2:51612444-51612463 | None:intergenic | 40.0% | |
| AGAAACATGCGGATAGAAAC+AGG | - | chr2_2:51612699-51612718 | None:intergenic | 40.0% | |
| TTTCTATCCGCATGTTTCTC+AGG | + | chr2_2:51612700-51612719 | Msa0256660:intron | 40.0% | |
| TCTTTGACCTGAGAAACATG+CGG | - | chr2_2:51612710-51612729 | None:intergenic | 40.0% | |
| ! | TGGCAAAGCATAAAGCATCT+TGG | + | chr2_2:51613126-51613145 | Msa0256660:intron | 40.0% |
| TTCATATATGCAGGGCATAC+AGG | + | chr2_2:51613305-51613324 | Msa0256660:intron | 40.0% | |
| ACATGTTACAATGTCAGGGT+AGG | - | chr2_2:51613345-51613364 | None:intergenic | 40.0% | |
| TGGCACATGTTACAATGTCA+GGG | - | chr2_2:51613349-51613368 | None:intergenic | 40.0% | |
| TTGGCACATGTTACAATGTC+AGG | - | chr2_2:51613350-51613369 | None:intergenic | 40.0% | |
| TAACATGTGCCAACATGTTC+TGG | + | chr2_2:51613357-51613376 | Msa0256660:CDS | 40.0% | |
| GGATTTAAATGACCTGTTCC+CGG | - | chr2_2:51613425-51613444 | None:intergenic | 40.0% | |
| GTATGACATTCTTCAGGACT+TGG | - | chr2_2:51613466-51613485 | None:intergenic | 40.0% | |
| AAATTGTTCCGGGAACAATG+TGG | - | chr2_2:51613498-51613517 | None:intergenic | 40.0% | |
| ! | CCGGAACAATTTTACCATTC+TGG | + | chr2_2:51613506-51613525 | Msa0256660:CDS | 40.0% |
| TGATAAACGTCTCAAGGACT+TGG | - | chr2_2:51613610-51613629 | None:intergenic | 40.0% | |
| GGCTGAGGGATAAAATGAAA+GGG | - | chr2_2:51613643-51613662 | None:intergenic | 40.0% | |
| CTTCCCAATAGACAACACTA+CGG | - | chr2_2:51613664-51613683 | None:intergenic | 40.0% | |
| ! | AACGTGTGATTTTGCAGACA+TGG | + | chr2_2:51613735-51613754 | Msa0256660:CDS | 40.0% |
| !! | CGTTTTTGTCACTTCCTGTT+TGG | - | chr2_2:51613889-51613908 | None:intergenic | 40.0% |
| ACAGGAAGTGACAAAAACGA+TGG | + | chr2_2:51613890-51613909 | Msa0256660:CDS | 40.0% | |
| !!! | GGTGTGGACCTTTTAAAACA+TGG | + | chr2_2:51613921-51613940 | Msa0256660:CDS | 40.0% |
| GACAGAAGAAGAAGCGAAAT+TGG | + | chr2_2:51613979-51613998 | Msa0256660:CDS | 40.0% | |
| !!! | GAAGCGAAATTGGTTTTAGG+TGG | + | chr2_2:51613989-51614008 | Msa0256660:CDS | 40.0% |
| !!! | AGCGAAATTGGTTTTAGGTG+GGG | + | chr2_2:51613991-51614010 | Msa0256660:CDS | 40.0% |
| ! | ACAAGCCGATGAAACTGTTT+TGG | + | chr2_2:51614033-51614052 | Msa0256660:CDS | 40.0% |
| TCAGGCAATAGGGATGAAAA+GGG | + | chr2_2:51614103-51614122 | Msa0256660:CDS | 40.0% | |
| GAATGAATGGAGAAGCAGAA+TGG | + | chr2_2:51614159-51614178 | Msa0256660:CDS | 40.0% | |
| ! | AGAATGGTGAGTAGAGGTAT+AGG | + | chr2_2:51614175-51614194 | Msa0256660:CDS | 40.0% |
| AGTGCAAATATCAGGACACA+CGG | - | chr2_2:51614321-51614340 | None:intergenic | 40.0% | |
| ! | CTCTTTTTCCATTTGAGAGG+AGG | - | chr2_2:51614408-51614427 | None:intergenic | 40.0% |
| TTATGGAGGATCTGCATGGT+GGG | - | chr2_2:51610804-51610823 | None:intergenic | 45.0% | |
| TTTATGGAGGATCTGCATGG+TGG | - | chr2_2:51610805-51610824 | None:intergenic | 45.0% | |
| ! | GTGATTGAGTTGTGTGTGTG+TGG | - | chr2_2:51610830-51610849 | None:intergenic | 45.0% |
| !! | GTTTCTTGGTTTGGGCCATA+TGG | - | chr2_2:51610957-51610976 | None:intergenic | 45.0% |
| CACGTGAGGTTTCTTGGTTT+GGG | - | chr2_2:51610965-51610984 | None:intergenic | 45.0% | |
| ! | TGATGGTGAATGTTGGAGAG+AGG | - | chr2_2:51611012-51611031 | None:intergenic | 45.0% |
| GAGGTGGTAGATTGTTTGAG+AGG | - | chr2_2:51611141-51611160 | None:intergenic | 45.0% | |
| !! | GCGTGGTTTAGTTCTGTGTT+TGG | - | chr2_2:51611193-51611212 | None:intergenic | 45.0% |
| CTTAACCGCCGTAACATCAT+GGG | + | chr2_2:51611258-51611277 | Msa0256660:CDS | 45.0% | |
| TTAACCGCCGTAACATCATG+GGG | + | chr2_2:51611259-51611278 | Msa0256660:CDS | 45.0% | |
| GGTTCAGAAGGAAGAACCAA+AGG | - | chr2_2:51611511-51611530 | None:intergenic | 45.0% | |
| !! | TCAGCCAACATTGGTTCAGA+AGG | - | chr2_2:51611523-51611542 | None:intergenic | 45.0% |
| ! | GAACCAATGTTGGCTGAGAA+AGG | + | chr2_2:51611526-51611545 | Msa0256660:CDS | 45.0% |
| GTTGAATTTGGGCTTGATCG+TGG | + | chr2_2:51611598-51611617 | Msa0256660:CDS | 45.0% | |
| AAAAATTCTAACCCTCCGGC+TGG | + | chr2_2:51612196-51612215 | Msa0256660:intron | 45.0% | |
| GTGTGTCTCTCACTACCAAT+TGG | - | chr2_2:51612957-51612976 | None:intergenic | 45.0% | |
| ! | GCATAAAGCATCTTGGACTG+TGG | + | chr2_2:51613133-51613152 | Msa0256660:intron | 45.0% |
| TACAATGTCAGGGTAGGCTA+AGG | - | chr2_2:51613339-51613358 | None:intergenic | 45.0% | |
| TGGTAGGTCTTGGGGTTTAA+GGG | - | chr2_2:51613446-51613465 | None:intergenic | 45.0% | |
| TTGGTAGGTCTTGGGGTTTA+AGG | - | chr2_2:51613447-51613466 | None:intergenic | 45.0% | |
| ! | TTCAGGACTTGGTAGGTCTT+GGG | - | chr2_2:51613455-51613474 | None:intergenic | 45.0% |
| ! | GACATTCTTCAGGACTTGGT+AGG | - | chr2_2:51613462-51613481 | None:intergenic | 45.0% |
| TGACTTCATCAGCACCAGAA+TGG | - | chr2_2:51613523-51613542 | None:intergenic | 45.0% | |
| ATGAAGTCATACCAGGTTGC+TGG | + | chr2_2:51613534-51613553 | Msa0256660:CDS | 45.0% | |
| CGGCTGAGGGATAAAATGAA+AGG | - | chr2_2:51613644-51613663 | None:intergenic | 45.0% | |
| ATAGACAACACTACGGCTGA+GGG | - | chr2_2:51613657-51613676 | None:intergenic | 45.0% | |
| AATAGACAACACTACGGCTG+AGG | - | chr2_2:51613658-51613677 | None:intergenic | 45.0% | |
| TCAGCCGTAGTGTTGTCTAT+TGG | + | chr2_2:51613657-51613676 | Msa0256660:CDS | 45.0% | |
| CAGCCGTAGTGTTGTCTATT+GGG | + | chr2_2:51613658-51613677 | Msa0256660:CDS | 45.0% | |
| ! | TCTTTAGGGAGAATCGTCGA+TGG | - | chr2_2:51613716-51613735 | None:intergenic | 45.0% |
| ! | GAAGTCTGATGATGACACGA+TGG | - | chr2_2:51613810-51613829 | None:intergenic | 45.0% |
| GGAAGTGACAAAAACGATGG+AGG | + | chr2_2:51613893-51613912 | Msa0256660:CDS | 45.0% | |
| ACAAAAACGATGGAGGCTCT+TGG | + | chr2_2:51613900-51613919 | Msa0256660:CDS | 45.0% | |
| !!! | GAAATTGGTTTTAGGTGGGG+AGG | + | chr2_2:51613994-51614013 | Msa0256660:CDS | 45.0% |
| !! | CTGTTTTGGATTCACGGCTT+TGG | + | chr2_2:51614047-51614066 | Msa0256660:CDS | 45.0% |
| TTGGCCTAGAACTTCTGCAA+TGG | + | chr2_2:51614066-51614085 | Msa0256660:CDS | 45.0% | |
| GTCAGGCAATAGGGATGAAA+AGG | + | chr2_2:51614102-51614121 | Msa0256660:CDS | 45.0% | |
| AGAAGCAGAATGGTGAGTAG+AGG | + | chr2_2:51614169-51614188 | Msa0256660:CDS | 45.0% | |
| ACACACCAAAGTGGCTGAAT+AGG | - | chr2_2:51614208-51614227 | None:intergenic | 45.0% | |
| ! | TTCAGCCACTTTGGTGTGTT+AGG | + | chr2_2:51614209-51614228 | Msa0256660:CDS | 45.0% |
| GTACTGTGTTGCACATACCA+GGG | - | chr2_2:51614237-51614256 | None:intergenic | 45.0% | |
| TGTACTGTGTTGCACATACC+AGG | - | chr2_2:51614238-51614257 | None:intergenic | 45.0% | |
| GGAAACGCAGTGCAAATATC+AGG | - | chr2_2:51614329-51614348 | None:intergenic | 45.0% | |
| ACCAAACTCCTCCTCTCAAA+TGG | + | chr2_2:51614397-51614416 | Msa0256660:three_prime_UTR | 45.0% | |
| TCCATTTGAGAGGAGGAGTT+TGG | - | chr2_2:51614401-51614420 | None:intergenic | 45.0% | |
| GGGGATGATGTCATGAGGAT+AGG | - | chr2_2:51610784-51610803 | None:intergenic | 50.0% | |
| ! | ATGGTGGGGATGATGTCATG+AGG | - | chr2_2:51610789-51610808 | None:intergenic | 50.0% |
| TATGGAGGATCTGCATGGTG+GGG | - | chr2_2:51610803-51610822 | None:intergenic | 50.0% | |
| CCACGTGAGGTTTCTTGGTT+TGG | - | chr2_2:51610966-51610985 | None:intergenic | 50.0% | |
| CCAAACCAAGAAACCTCACG+TGG | + | chr2_2:51610963-51610982 | Msa0256660:CDS | 50.0% | |
| GGTGAATGTTGGAGAGAGGA+GGG | - | chr2_2:51611008-51611027 | None:intergenic | 50.0% | |
| TGGTGAATGTTGGAGAGAGG+AGG | - | chr2_2:51611009-51611028 | None:intergenic | 50.0% | |
| !! | GTGGTGGTGATGGTGAATGT+TGG | - | chr2_2:51611019-51611038 | None:intergenic | 50.0% |
| ! | GTTTGTGTAGCGGGATATGG+CGG | - | chr2_2:51611071-51611090 | None:intergenic | 50.0% |
| ! | GAGGTTTGTGTAGCGGGATA+TGG | - | chr2_2:51611074-51611093 | None:intergenic | 50.0% |
| TAACGTGTAGGATTCGTCGG+TGG | - | chr2_2:51611215-51611234 | None:intergenic | 50.0% | |
| TGATGTTACGGCGGTTAAGG+TGG | - | chr2_2:51611257-51611276 | None:intergenic | 50.0% | |
| CCATGATGTTACGGCGGTTA+AGG | - | chr2_2:51611260-51611279 | None:intergenic | 50.0% | |
| CCTTAACCGCCGTAACATCA+TGG | + | chr2_2:51611257-51611276 | Msa0256660:CDS | 50.0% | |
| CATGGCTCCCCATGATGTTA+CGG | - | chr2_2:51611269-51611288 | None:intergenic | 50.0% | |
| AAACGTTCTCCCAGCTTGCA+TGG | + | chr2_2:51611299-51611318 | Msa0256660:CDS | 50.0% | |
| AACGTTCTCCCAGCTTGCAT+GGG | + | chr2_2:51611300-51611319 | Msa0256660:CDS | 50.0% | |
| ATACCGCGATGACCGAACAA+CGG | - | chr2_2:51611370-51611389 | None:intergenic | 50.0% | |
| GCACCTTTCTCAGCCAACAT+TGG | - | chr2_2:51611532-51611551 | None:intergenic | 50.0% | |
| !! | TAACCAGGGGCATCAATCTC+AGG | - | chr2_2:51611637-51611656 | None:intergenic | 50.0% |
| ! | GTATACCTTTTCCAGCCGGA+GGG | - | chr2_2:51612210-51612229 | None:intergenic | 50.0% |
| ! | AGTATACCTTTTCCAGCCGG+AGG | - | chr2_2:51612211-51612230 | None:intergenic | 50.0% |
| TTCCTGACTCTAGTGAGCTC+TGG | + | chr2_2:51612452-51612471 | Msa0256660:intron | 50.0% | |
| TCCTGACTCTAGTGAGCTCT+GGG | + | chr2_2:51612453-51612472 | Msa0256660:intron | 50.0% | |
| !! | TTGTGGGAGTACCAGCCAAT+TGG | + | chr2_2:51612939-51612958 | Msa0256660:intron | 50.0% |
| GTCTCTCACTACCAATTGGC+TGG | - | chr2_2:51612953-51612972 | None:intergenic | 50.0% | |
| ATGCAGGGCATACAGGATCA+TGG | + | chr2_2:51613312-51613331 | Msa0256660:intron | 50.0% | |
| TGCAGGGCATACAGGATCAT+GGG | + | chr2_2:51613313-51613332 | Msa0256660:intron | 50.0% | |
| CATGTGCCAACATGTTCTGG+TGG | + | chr2_2:51613360-51613379 | Msa0256660:CDS | 50.0% | |
| ! | TCAGGACTTGGTAGGTCTTG+GGG | - | chr2_2:51613454-51613473 | None:intergenic | 50.0% |
| ! | CTTCAGGACTTGGTAGGTCT+TGG | - | chr2_2:51613456-51613475 | None:intergenic | 50.0% |
| CGTCGCGTATGACATTCTTC+AGG | - | chr2_2:51613472-51613491 | None:intergenic | 50.0% | |
| CGACGTAACCACATTGTTCC+CGG | + | chr2_2:51613487-51613506 | Msa0256660:CDS | 50.0% | |
| !! | GGTGCTGATGAAGTCATACC+AGG | + | chr2_2:51613527-51613546 | Msa0256660:CDS | 50.0% |
| GGAGAATCGTCGATGGAACA+TGG | - | chr2_2:51613709-51613728 | None:intergenic | 50.0% | |
| TCGGCCATTGCAGAAGTTCT+AGG | - | chr2_2:51614073-51614092 | None:intergenic | 50.0% | |
| ATTGCCTGACCACAAGGACT+CGG | - | chr2_2:51614092-51614111 | None:intergenic | 50.0% | |
| AGTCCTTGTGGTCAGGCAAT+AGG | + | chr2_2:51614092-51614111 | Msa0256660:CDS | 50.0% | |
| GTCCTTGTGGTCAGGCAATA+GGG | + | chr2_2:51614093-51614112 | Msa0256660:CDS | 50.0% | |
| ATCCCTATTGCCTGACCACA+AGG | - | chr2_2:51614098-51614117 | None:intergenic | 50.0% | |
| CTGAGCCTATTCAGCCACTT+TGG | + | chr2_2:51614200-51614219 | Msa0256660:CDS | 50.0% | |
| GGGTTCCTAACACACCAAAG+TGG | - | chr2_2:51614217-51614236 | None:intergenic | 50.0% | |
| ! | CTTTGGTGTGTTAGGAACCC+TGG | + | chr2_2:51614217-51614236 | Msa0256660:CDS | 50.0% |
| GAATGTTGGAGAGAGGAGGG+TGG | - | chr2_2:51611005-51611024 | None:intergenic | 55.0% | |
| GTGAGGTGGTTGTTGTGGTG+GGG | - | chr2_2:51611046-51611065 | None:intergenic | 55.0% | |
| GGTGAGGTGGTTGTTGTGGT+GGG | - | chr2_2:51611047-51611066 | None:intergenic | 55.0% | |
| TGTTACGGCGGTTAAGGTGG+CGG | - | chr2_2:51611254-51611273 | None:intergenic | 55.0% | |
| ACATCATGGGGAGCCATGCA+TGG | + | chr2_2:51611271-51611290 | Msa0256660:CDS | 55.0% | |
| ACGTTCTCCCAGCTTGCATG+GGG | + | chr2_2:51611301-51611320 | Msa0256660:CDS | 55.0% | |
| TGGGTTACCCCATGCAAGCT+GGG | - | chr2_2:51611311-51611330 | None:intergenic | 55.0% | |
| TTGGGTTACCCCATGCAAGC+TGG | - | chr2_2:51611312-51611331 | None:intergenic | 55.0% | |
| GTTAACGACGCGCCGTTGTT+CGG | + | chr2_2:51611355-51611374 | Msa0256660:CDS | 55.0% | |
| TTGCCTGAGATTGATGCCCC+TGG | + | chr2_2:51611631-51611650 | Msa0256660:CDS | 55.0% | |
| TCTAACCCTCCGGCTGGAAA+AGG | + | chr2_2:51612202-51612221 | Msa0256660:intron | 55.0% | |
| TCCCAGAGCTCACTAGAGTC+AGG | - | chr2_2:51612457-51612476 | None:intergenic | 55.0% | |
| AACATGTTCTGGTGGCCAGC+CGG | + | chr2_2:51613368-51613387 | Msa0256660:CDS | 55.0% | |
| ACGATCTGGCCAATCGCTTC+CGG | - | chr2_2:51613390-51613409 | None:intergenic | 55.0% | |
| AGATCGTCTTGCAGCAGAGC+CGG | + | chr2_2:51613403-51613422 | Msa0256660:CDS | 55.0% | |
| !! | GGATCGGTTTTCCAGCAACC+TGG | - | chr2_2:51613548-51613567 | None:intergenic | 55.0% |
| ! | CTGATGATGACACGATGGCG+CGG | - | chr2_2:51613805-51613824 | None:intergenic | 55.0% |
| TGTGGACACGGCGACTTTAC+TGG | + | chr2_2:51613842-51613861 | Msa0256660:CDS | 55.0% | |
| AACGATGGAGGCTCTTGGTG+TGG | + | chr2_2:51613905-51613924 | Msa0256660:CDS | 55.0% | |
| TAGGTGGGGAGGTAGCATTG+TGG | + | chr2_2:51614005-51614024 | Msa0256660:CDS | 55.0% | |
| TGCTGCCACCACACATCTCT+CGG | + | chr2_2:51614294-51614313 | Msa0256660:three_prime_UTR | 55.0% | |
| GGGGACCACGTGAGGTTTCT+TGG | - | chr2_2:51610971-51610990 | None:intergenic | 60.0% | |
| !! | GAGGGTGGTTTGCTGTGGTG+GGG | - | chr2_2:51610990-51611009 | None:intergenic | 60.0% |
| !! | GGAGGGTGGTTTGCTGTGGT+GGG | - | chr2_2:51610991-51611010 | None:intergenic | 60.0% |
| !! | AGGAGGGTGGTTTGCTGTGG+TGG | - | chr2_2:51610992-51611011 | None:intergenic | 60.0% |
| !! | GAGAGGAGGGTGGTTTGCTG+TGG | - | chr2_2:51610995-51611014 | None:intergenic | 60.0% |
| ! | GTTGTTGTGGTGGGGAGTGG+TGG | - | chr2_2:51611038-51611057 | None:intergenic | 60.0% |
| ! | GTGGTTGTTGTGGTGGGGAG+TGG | - | chr2_2:51611041-51611060 | None:intergenic | 60.0% |
| CGGTGAGGTGGTTGTTGTGG+TGG | - | chr2_2:51611048-51611067 | None:intergenic | 60.0% | |
| ! | TGTGTAGCGGGATATGGCGG+CGG | - | chr2_2:51611068-51611087 | None:intergenic | 60.0% |
| TGTAGGATTCGTCGGTGGCG+TGG | - | chr2_2:51611210-51611229 | None:intergenic | 60.0% | |
| GGCTCCCCATGATGTTACGG+CGG | - | chr2_2:51611266-51611285 | None:intergenic | 60.0% | |
| ! | GGCTGGCCACCAGAACATGT+TGG | - | chr2_2:51613369-51613388 | None:intergenic | 60.0% |
| GGCTCTGCTGCAAGACGATC+TGG | - | chr2_2:51613404-51613423 | None:intergenic | 60.0% | |
| GATCGTCTTGCAGCAGAGCC+GGG | + | chr2_2:51613404-51613423 | Msa0256660:CDS | 60.0% | |
| CTGCAATGGCCGAGTCCTTG+TGG | + | chr2_2:51614080-51614099 | Msa0256660:CDS | 60.0% | |
| ATGGCCGAGTCCTTGTGGTC+AGG | + | chr2_2:51614085-51614104 | Msa0256660:CDS | 60.0% | |
| ! | GGGTCTGAAGCGATACGCAG+AGG | + | chr2_2:51614123-51614142 | Msa0256660:CDS | 60.0% |
| ACGGTCCGAGAGATGTGTGG+TGG | - | chr2_2:51614302-51614321 | None:intergenic | 60.0% | |
| CACACGGTCCGAGAGATGTG+TGG | - | chr2_2:51614305-51614324 | None:intergenic | 60.0% | |
| !! | GTGGGGAGTGGTGGTGGTGA+TGG | - | chr2_2:51611029-51611048 | None:intergenic | 65.0% |
| ! | GTTGTGGTGGGGAGTGGTGG+TGG | - | chr2_2:51611035-51611054 | None:intergenic | 65.0% |
| CGGCGGTGAGGTGGTTGTTG+TGG | - | chr2_2:51611051-51611070 | None:intergenic | 65.0% | |
| ! | GGTTAAGGTGGCGGTGGGAG+TGG | - | chr2_2:51611245-51611264 | None:intergenic | 65.0% |
| ! | ACGGCGGTTAAGGTGGCGGT+GGG | - | chr2_2:51611250-51611269 | None:intergenic | 65.0% |
| ! | TACGGCGGTTAAGGTGGCGG+TGG | - | chr2_2:51611251-51611270 | None:intergenic | 65.0% |
| ATGGGGTAACCCAACGCGCG+TGG | + | chr2_2:51611318-51611337 | Msa0256660:CDS | 65.0% | |
| CGTTCACAGCCACGCGCGTT+GGG | - | chr2_2:51611330-51611349 | None:intergenic | 65.0% | |
| ACGTTCACAGCCACGCGCGT+TGG | - | chr2_2:51611331-51611350 | None:intergenic | 65.0% | |
| GCGCCGTTGTTCGGTCATCG+CGG | + | chr2_2:51611364-51611383 | Msa0256660:CDS | 65.0% | |
| TCTGGCCAATCGCTTCCGGC+TGG | - | chr2_2:51613386-51613405 | None:intergenic | 65.0% | |
| CTTGCAGCAGAGCCGGGAAC+AGG | + | chr2_2:51613410-51613429 | Msa0256660:CDS | 65.0% | |
| ! | GCTGTGGTGGGGACCACGTG+AGG | - | chr2_2:51610979-51610998 | None:intergenic | 70.0% |
| GGGATATGGCGGCGGTGAGG+TGG | - | chr2_2:51611060-51611079 | None:intergenic | 70.0% | |
| AGCGGGATATGGCGGCGGTG+AGG | - | chr2_2:51611063-51611082 | None:intergenic | 70.0% | |
| GGTGGCCAGCCGGAAGCGAT+TGG | + | chr2_2:51613378-51613397 | Msa0256660:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 51610678 | 51614597 | 51610678 | ID=Msa0256660;Name=Msa0256660 |
| chr2_2 | mRNA | 51610678 | 51614597 | 51610678 | ID=Msa0256660-mRNA-1;Parent=Msa0256660;Name=Msa0256660-mRNA-1;_AED=0.01;_eAED=0.01;_QI=218|1|1|1|1|1|2|330|568 |
| chr2_2 | exon | 51610678 | 51611652 | 51610678 | ID=Msa0256660-mRNA-1:exon:15558;Parent=Msa0256660-mRNA-1 |
| chr2_2 | exon | 51613318 | 51614597 | 51613318 | ID=Msa0256660-mRNA-1:exon:15559;Parent=Msa0256660-mRNA-1 |
| chr2_2 | five_prime_UTR | 51610678 | 51610895 | 51610678 | ID=Msa0256660-mRNA-1:five_prime_utr;Parent=Msa0256660-mRNA-1 |
| chr2_2 | CDS | 51610896 | 51611652 | 51610896 | ID=Msa0256660-mRNA-1:cds;Parent=Msa0256660-mRNA-1 |
| chr2_2 | CDS | 51613318 | 51614267 | 51613318 | ID=Msa0256660-mRNA-1:cds;Parent=Msa0256660-mRNA-1 |
| chr2_2 | three_prime_UTR | 51614268 | 51614597 | 51614268 | ID=Msa0256660-mRNA-1:three_prime_utr;Parent=Msa0256660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
