AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0258340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258340 MtrunA17_Chr2g0320981 99.753 405 1 0 379 783 282 686 0.0 822
Msa0258340 MtrunA17_Chr2g0320981 89.474 304 8 1 1 304 1 280 0.0 540
Msa0258340 MtrunA17_Chr4g0027121 90.370 405 39 0 379 783 290 694 0.0 726
Msa0258340 MtrunA17_Chr4g0027121 60.308 325 71 9 1 304 1 288 9.33e-104 334
Msa0258340 MtrunA17_Chr2g0332871 75.844 385 67 1 399 783 293 651 0.0 586
Msa0258340 MtrunA17_Chr2g0332871 46.450 338 66 10 28 308 4 283 7.31e-64 226
Msa0258340 MtrunA17_Chr8g0367361 56.683 404 173 1 380 783 375 776 2.06e-166 500
Msa0258340 MtrunA17_Chr8g0367361 53.704 162 51 1 143 304 235 372 2.34e-46 177
Msa0258340 MtrunA17_Chr5g0412181 54.568 405 182 1 379 783 303 705 1.34e-150 457
Msa0258340 MtrunA17_Chr5g0412181 36.923 325 120 8 23 304 19 301 2.05e-49 185
Msa0258340 MtrunA17_Chr3g0119521 38.152 422 219 8 359 775 133 517 2.62e-78 261
Msa0258340 MtrunA17_Chr3g0119521 33.758 157 82 1 147 303 15 149 5.70e-20 94.4
Msa0258340 MtrunA17_Chr8g0379171 36.341 399 218 4 379 775 157 521 1.68e-77 259
Msa0258340 MtrunA17_Chr8g0379171 33.129 163 84 2 147 309 20 157 5.93e-23 103
Msa0258340 MtrunA17_Chr2g0284061 35.840 399 220 4 379 775 157 521 1.43e-74 251
Msa0258340 MtrunA17_Chr2g0284061 29.448 163 90 2 147 309 20 157 6.32e-18 87.8
Msa0258340 MtrunA17_Chr8g0364611 32.701 422 243 6 359 775 145 530 1.32e-66 230
Msa0258340 MtrunA17_Chr8g0364611 36.029 136 65 1 164 299 44 157 2.49e-17 86.3
Msa0258340 MtrunA17_Chr4g0059331 32.227 422 245 6 359 775 144 529 1.33e-64 224
Msa0258340 MtrunA17_Chr4g0059331 37.500 136 63 1 164 299 43 156 6.84e-20 94.0
Msa0258340 MtrunA17_Chr1g0154001 33.498 406 228 8 370 771 173 540 3.57e-63 221
Msa0258340 MtrunA17_Chr1g0154001 34.641 153 76 2 146 297 42 171 1.36e-20 96.3
Msa0258340 MtrunA17_Chr3g0117941 32.227 422 245 6 359 775 144 529 5.75e-63 220
Msa0258340 MtrunA17_Chr3g0117941 36.765 136 64 1 164 299 43 156 1.64e-19 92.8
Msa0258340 MtrunA17_Chr5g0414131 30.923 401 239 4 379 775 169 535 8.78e-61 214
Msa0258340 MtrunA17_Chr5g0414131 34.559 136 68 2 164 299 48 162 1.55e-17 86.7
Msa0258340 MtrunA17_Chr1g0207021 31.000 400 234 5 381 775 162 524 1.59e-58 207
Msa0258340 MtrunA17_Chr1g0207021 31.724 145 69 4 151 291 27 145 1.21e-14 77.4
Msa0258340 MtrunA17_Chr3g0134911 30.952 420 242 6 379 775 188 582 4.27e-58 208
Msa0258340 MtrunA17_Chr3g0134911 31.618 136 71 1 164 299 68 181 2.15e-17 86.7
Msa0258340 MtrunA17_Chr5g0405471 30.216 417 233 7 379 775 181 559 2.08e-53 194
Msa0258340 MtrunA17_Chr5g0405471 30.337 178 96 3 122 299 25 174 8.05e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258340 AT2G27810.1 81.586 391 72 0 393 783 319 709 0.0 656
Msa0258340 AT2G27810.1 57.605 309 81 7 21 304 20 303 2.68e-99 323
Msa0258340 AT2G27810.4 76.867 415 72 1 393 783 319 733 0.0 642
Msa0258340 AT2G27810.4 57.605 309 81 7 21 304 20 303 3.85e-99 323
Msa0258340 AT2G27810.2 82.657 271 47 0 393 663 319 589 3.27e-148 447
Msa0258340 AT2G27810.2 57.605 309 81 7 21 304 20 303 1.23e-100 323
Msa0258340 AT4G38050.1 54.912 397 177 1 379 775 310 704 1.92e-145 444
Msa0258340 AT4G38050.1 39.032 310 129 8 15 304 39 308 3.03e-50 188
Msa0258340 AT2G27810.3 81.250 224 42 0 393 616 319 542 1.10e-116 363
Msa0258340 AT2G27810.3 57.605 309 81 7 21 304 20 303 5.92e-101 322
Msa0258340 AT2G34190.1 35.589 399 221 4 379 775 157 521 1.75e-78 262
Msa0258340 AT2G34190.1 32.192 146 74 2 164 309 37 157 1.49e-17 87.0
Msa0258340 AT2G05760.1 37.750 400 212 6 379 775 152 517 9.27e-76 255
Msa0258340 AT2G05760.1 32.075 159 86 1 145 303 13 149 9.79e-19 90.9
Msa0258340 AT1G60030.1 34.500 400 224 4 380 775 170 535 1.89e-68 236
Msa0258340 AT1G60030.1 37.500 136 63 1 164 299 49 162 1.44e-19 93.6
Msa0258340 AT5G49990.2 33.416 401 229 4 379 775 159 525 3.81e-64 224
Msa0258340 AT5G49990.2 34.559 136 67 1 164 299 39 152 1.01e-18 90.9
Msa0258340 AT5G49990.3 33.416 401 229 4 379 775 159 525 3.81e-64 224
Msa0258340 AT5G49990.3 34.559 136 67 1 164 299 39 152 1.01e-18 90.9
Msa0258340 AT5G49990.1 33.416 401 229 4 379 775 159 525 3.81e-64 224
Msa0258340 AT5G49990.1 34.559 136 67 1 164 299 39 152 1.01e-18 90.9
Msa0258340 AT5G49990.4 33.416 401 229 4 379 775 159 525 3.81e-64 224
Msa0258340 AT5G49990.4 34.559 136 67 1 164 299 39 152 1.01e-18 90.9
Msa0258340 AT5G62890.1 33.167 401 230 4 379 775 163 529 4.70e-63 221
Msa0258340 AT5G62890.1 37.500 136 63 1 164 299 43 156 1.92e-20 96.3
Msa0258340 AT5G62890.2 33.167 401 230 4 379 775 163 529 4.70e-63 221
Msa0258340 AT5G62890.2 37.500 136 63 1 164 299 43 156 1.92e-20 96.3
Msa0258340 AT5G62890.3 33.167 401 230 4 379 775 163 529 4.70e-63 221
Msa0258340 AT5G62890.3 37.500 136 63 1 164 299 43 156 1.92e-20 96.3
Msa0258340 AT1G10540.1 32.692 416 229 8 371 775 161 536 4.73e-62 218
Msa0258340 AT1G10540.1 29.412 136 74 1 164 299 47 160 6.85e-15 79.0
Msa0258340 AT2G26510.1 34.278 388 210 7 394 774 196 545 4.93e-61 216
Msa0258340 AT2G26510.1 33.766 154 74 2 146 296 43 171 3.74e-18 89.4
Msa0258340 AT1G49960.1 32.918 401 231 4 379 775 157 523 1.38e-57 206
Msa0258340 AT1G49960.1 38.356 146 62 2 162 304 35 155 5.64e-20 94.7
Msa0258340 AT5G62890.4 37.209 301 171 2 379 679 163 445 2.00e-57 204
Msa0258340 AT5G62890.4 37.500 136 63 1 164 299 43 156 1.58e-20 96.3
Msa0258340 AT1G65550.1 29.756 410 237 6 379 775 167 538 8.20e-55 198
Msa0258340 AT1G65550.1 34.641 153 78 1 147 299 30 160 1.68e-18 90.1
Msa0258340 AT1G10540.2 35.246 244 129 5 379 615 167 388 2.82e-38 147
Msa0258340 AT1G10540.2 29.412 136 74 1 164 299 47 160 4.73e-15 78.6
Msa0258340 AT2G26510.3 35.398 226 120 4 394 615 196 399 4.28e-35 139
Msa0258340 AT2G26510.3 33.766 154 74 2 146 296 43 171 2.12e-18 89.0
Msa0258340 AT2G26510.2 36.150 213 110 4 394 602 196 386 1.99e-33 134
Msa0258340 AT2G26510.2 33.766 154 74 2 146 296 43 171 1.48e-18 89.7
Msa0258340 AT5G25420.1 25.413 303 136 7 379 679 179 393 1.45e-20 95.5
Msa0258340 AT5G25420.1 33.987 153 79 1 147 299 42 172 5.35e-19 90.9

Find 273 sgRNAs with CRISPR-Local

Find 679 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCATTATGTTTCTATATT+AGG 0.169100 2_2:+54614526 Msa0258340:CDS
ATGAGGATGGGTTTGCTTTA+AGG 0.185976 2_2:+54614190 Msa0258340:CDS
TACAATTGCTGTGACTAAAA+TGG 0.195962 2_2:+54618733 Msa0258340:CDS
GGCACTGACAAGTTGGAATT+TGG 0.213465 2_2:-54621250 None:intergenic
ACCTGATTTGCAGGTTCCTT+TGG 0.236656 2_2:+54617537 Msa0258340:intron
GGTGGAACTGGTTTCGCTTC+TGG 0.248833 2_2:-54613841 None:intergenic
TGTTTATCTGGCTCCAGTTT+TGG 0.253065 2_2:+54614831 Msa0258340:CDS
ATATACTAACTAAAACTTTC+CGG 0.267292 2_2:-54622745 None:intergenic
GGTCTCTGGGGTACTGGAAC+TGG 0.268292 2_2:+54618683 Msa0258340:CDS
GGGTTCATTGCTTCAATTCC+TGG 0.274645 2_2:+54621058 Msa0258340:CDS
CGAATCCACGGATGAGATTA+AGG 0.274927 2_2:-54617815 None:intergenic
GGAAGGTCTTTCTAGTGTTT+TGG 0.275832 2_2:+54618658 Msa0258340:CDS
TCTCGCAATATCATAATAAT+TGG 0.281920 2_2:+54621169 Msa0258340:CDS
CTTCGTAAGATATCTGTTCT+TGG 0.293844 2_2:+54617384 Msa0258340:CDS
TTGGCTGGTCTCTGGGGTAC+TGG 0.299524 2_2:+54618677 Msa0258340:CDS
CTAAGAGATTCACCTGGTTT+AGG 0.302106 2_2:+54614234 Msa0258340:CDS
CCCGCATACTTTCAACAATA+TGG 0.308753 2_2:+54621220 Msa0258340:CDS
AGTGTAGAAGTGAAGGTTTA+GGG 0.309974 2_2:-54613697 None:intergenic
TTGGTCTCGCCGGAGAATTT+TGG 0.314822 2_2:-54613895 None:intergenic
CATTGGCAACCCATAGTCTT+TGG 0.316812 2_2:-54622355 None:intergenic
TACCGAACGTTGGCGAGGTT+CGG 0.317187 2_2:-54613794 None:intergenic
CCTGATTTGCAGGTTCCTTT+GGG 0.322059 2_2:+54617538 Msa0258340:intron
ATTATTTATACCTGCCAAAC+AGG 0.323167 2_2:+54622720 Msa0258340:three_prime_UTR
TGTTGAATGGGTGGTATGAT+TGG 0.328355 2_2:+54622508 Msa0258340:three_prime_UTR
AAACATACCTGCCTCAAATA+TGG 0.329584 2_2:+54617633 Msa0258340:CDS
TAAACTCATACCTTACTAAC+AGG 0.333726 2_2:-54615632 None:intergenic
ATTCCTGGAGTCATGGTTGC+TGG 0.335456 2_2:+54621073 Msa0258340:CDS
GGGCCTTTCCAAAGCAAATA+TGG 0.336173 2_2:+54621307 Msa0258340:CDS
TTTGAACGCGGTCTGGATAC+TGG 0.338456 2_2:-54616869 None:intergenic
TCCTGTATTCCACTGGAAAA+TGG 0.341057 2_2:+54617771 Msa0258340:CDS
CCTGCTATTGCCAAAGACTA+TGG 0.347150 2_2:+54622345 Msa0258340:CDS
GGGCTAAGAAAACCGGTTTC+CGG 0.348110 2_2:+54613872 Msa0258340:CDS
AACCAGTTCCACCTTCTTCA+TGG 0.348263 2_2:+54613851 Msa0258340:CDS
GAGACCAATGCCGGTGATTC+CGG 0.351492 2_2:+54613910 Msa0258340:CDS
TTCCAACTAACCGGCATTAT+CGG 0.353451 2_2:+54615395 Msa0258340:CDS
ACCGAACGTTGGCGAGGTTC+GGG 0.358868 2_2:-54613793 None:intergenic
GAGTGTAGAAGTGAAGGTTT+AGG 0.365469 2_2:-54613698 None:intergenic
TTTGCAGGTTCCTTTGGGTT+TGG 0.367091 2_2:+54617543 Msa0258340:intron
TCAACTGCGCTCTTCGTGTC+TGG 0.372892 2_2:+54614745 Msa0258340:CDS
CTTTGGGTTTGGCAATTACA+TGG 0.373887 2_2:+54617554 Msa0258340:CDS
ACACGACCTGCTTCGAGATC+GGG 0.377975 2_2:-54613979 None:intergenic
TACTATCTTTCACGCATAAC+TGG 0.378583 2_2:+54622783 Msa0258340:three_prime_UTR
CTTAATCTCATCCGTGGATT+CGG 0.378682 2_2:+54617816 Msa0258340:CDS
GGACTATTTACTCCTATGTT+TGG 0.382171 2_2:-54616832 None:intergenic
TTAGTTCCCATTGGTGTGTA+TGG 0.383223 2_2:+54614499 Msa0258340:intron
ACTTGTCATTGTTCCTGCTA+TGG 0.384370 2_2:+54614567 Msa0258340:CDS
CTGGTCTCCTCTGCTTTATG+TGG 0.387107 2_2:+54621092 Msa0258340:CDS
CCGCTCCAAACCCACCTTAG+TGG 0.390724 2_2:+54616804 Msa0258340:CDS
ACATTATTGTTCCAACTAAC+CGG 0.392328 2_2:+54615386 Msa0258340:CDS
GTCACAACCTTTGTAGTTGT+AGG 0.394524 2_2:-54617608 None:intergenic
GCTTTCTTGCTGACCGAAGC+TGG 0.394590 2_2:+54617583 Msa0258340:CDS
CGAGGTTCGGGTTCGGACAT+TGG 0.396581 2_2:-54613781 None:intergenic
GTCCAACTGCAGCAATGGTT+GGG 0.397694 2_2:-54617180 None:intergenic
ATACCCCTCCATATTTGCTT+TGG 0.399659 2_2:-54621315 None:intergenic
CTTGTCATTGTTCCTGCTAT+GGG 0.400087 2_2:+54614568 Msa0258340:CDS
GGGGTTCTTAGTCGCGGAAT+TGG 0.401025 2_2:+54618632 Msa0258340:CDS
TCTTAGTCGCGGAATTGGTC+TGG 0.401963 2_2:+54618637 Msa0258340:CDS
AAGAACCACTAAGGTGGGTT+TGG 0.406131 2_2:-54616809 None:intergenic
ACAATTGCTGTGACTAAAAT+GGG 0.412964 2_2:+54618734 Msa0258340:CDS
ATTTCCCTATCCATTGCAAT+GGG 0.414720 2_2:+54617744 Msa0258340:CDS
TTCACTGCAGGCGGTGGAAG+CGG 0.419366 2_2:-54614051 None:intergenic
AAGCCGCAGAGCAGTTCAAT+TGG 0.419441 2_2:+54618757 Msa0258340:CDS
CTTTCCGGTCCCTGTTTGGC+AGG 0.420021 2_2:-54622730 None:intergenic
GCAGCGAAAATATCGTGTTT+AGG 0.420690 2_2:-54622212 None:intergenic
AAAACTTTCCGGTCCCTGTT+TGG 0.425614 2_2:-54622734 None:intergenic
TGGGCAATGCTTACAGCATT+GGG 0.434766 2_2:+54621112 Msa0258340:CDS
GCCCATGAAGAAGGTGGAAC+TGG 0.436537 2_2:-54613853 None:intergenic
TCAGCTTCTCTAGACTTAAC+CGG 0.436599 2_2:-54613949 None:intergenic
AAAATCCGACCAACTCTCAT+TGG 0.436965 2_2:-54622372 None:intergenic
TAGTCCATTTGAACGCGGTC+TGG 0.437945 2_2:-54616876 None:intergenic
GCATCTAGACCTCCAACTCC+TGG 0.438157 2_2:+54618611 Msa0258340:CDS
CGTTTCTTCACTGCAGGCGG+TGG 0.439573 2_2:-54614057 None:intergenic
CCATTCAACAAAACGAGATC+TGG 0.441047 2_2:-54622495 None:intergenic
ACCTGCTTCGAGATCGGGAT+TGG 0.448060 2_2:-54613974 None:intergenic
GTGGGCAATGCTTACAGCAT+TGG 0.448946 2_2:+54621111 Msa0258340:CDS
GAGTTGATGATTGCCAAAAC+TGG 0.449602 2_2:-54614844 None:intergenic
AACACGACCTGCTTCGAGAT+CGG 0.450640 2_2:-54613980 None:intergenic
TTCACTCTCTTTATCTTCGC+CGG 0.451680 2_2:+54613645 Msa0258340:five_prime_UTR
TCCAGGTTGCCCTTGATACA+AGG 0.452484 2_2:+54614799 Msa0258340:CDS
TCTCTCCGTTTCTTCACTGC+AGG 0.452579 2_2:-54614063 None:intergenic
CCGTGAGAAGCCACAATGTA+AGG 0.453471 2_2:-54621286 None:intergenic
GTATCCAGACCGCGTTCAAA+TGG 0.454949 2_2:+54616872 Msa0258340:CDS
CCTTACATTGTGGCTTCTCA+CGG 0.455086 2_2:+54621286 Msa0258340:CDS
TGCTTCAATTCCTGGAGTCA+TGG 0.456853 2_2:+54621066 Msa0258340:CDS
TTCATTCAGTCCTTGAAACT+CGG 0.458195 2_2:-54614869 None:intergenic
GAATTATGTCCCTGTTAGTA+AGG 0.461216 2_2:+54615622 Msa0258340:CDS
ACGTTGGCGAGGTTCGGGTT+CGG 0.462008 2_2:-54613788 None:intergenic
GACCGATAATGCCGGTTAGT+TGG 0.463771 2_2:-54615397 None:intergenic
TAAAACCTCCCACATATAGT+TGG 0.464169 2_2:-54616731 None:intergenic
TCTTCATGGGCTAAGAAAAC+CGG 0.464598 2_2:+54613865 Msa0258340:CDS
ATCAACTCACCCGAGTTTCA+AGG 0.466883 2_2:+54614859 Msa0258340:CDS
ATACTGGATGCAGGGGATGC+AGG 0.467636 2_2:-54616853 None:intergenic
TCTCGAAGCAGGTCGTGTTA+AGG 0.467673 2_2:+54613984 Msa0258340:CDS
TGAGAAGGAGGATGGTGTTA+AGG 0.468959 2_2:+54616768 Msa0258340:CDS
ACCCGAACCTCGCCAACGTT+CGG 0.469036 2_2:+54613792 Msa0258340:CDS
AGCCTCACTATAGCGTAGAT+TGG 0.473513 2_2:-54621140 None:intergenic
CCCTTGTATCAAGGGCAACC+TGG 0.474719 2_2:-54614800 None:intergenic
CGACTAAGAACCCCAGGAGT+TGG 0.475770 2_2:-54618623 None:intergenic
AGAGGGTGGTAGCAGTGAGA+AGG 0.476966 2_2:+54616753 Msa0258340:CDS
CCGTTTGCTACCGGCGGAGG+AGG 0.477161 2_2:-54614012 None:intergenic
AAAAGAAGACCCTTGTATCA+AGG 0.477284 2_2:-54614809 None:intergenic
GGGTGGTAGCAGTGAGAAGG+AGG 0.478124 2_2:+54616756 Msa0258340:CDS
GGCTCTCTTCTAGCAACATC+AGG 0.478148 2_2:-54622324 None:intergenic
TTCAGATGGGTGAAGTGGGT+TGG 0.479937 2_2:+54622393 Msa0258340:CDS
TCGCCGTTTGCTACCGGCGG+AGG 0.481851 2_2:-54614015 None:intergenic
ACTGCAGAAAGCACATTTCA+AGG 0.482048 2_2:+54617665 Msa0258340:CDS
ACATATAATGAAGGAGCTGC+AGG 0.483798 2_2:+54615551 Msa0258340:CDS
CCATAGTCTTTGGCAATAGC+AGG 0.484927 2_2:-54622345 None:intergenic
TGGTGCAATACAAATATTAG+TGG 0.485741 2_2:+54617252 Msa0258340:CDS
CACCGCCTGCAGTGAAGAAA+CGG 0.485794 2_2:+54614058 Msa0258340:CDS
CGGCATTATCGGTCTTGTCA+CGG 0.496242 2_2:+54615406 Msa0258340:CDS
ACTATATTAACAGGGAAGGT+TGG 0.496292 2_2:+54621034 Msa0258340:intron
TTGTTGAAAGTATGCGGGTA+TGG 0.498329 2_2:-54621215 None:intergenic
GTAGTTGTAGGCTCCAGCTT+CGG 0.499373 2_2:-54617596 None:intergenic
TGAATACCATACACACCAAT+GGG 0.503312 2_2:-54614505 None:intergenic
TCTGATAGTGTTATCTCTCG+TGG 0.504058 2_2:+54618790 Msa0258340:CDS
TACAGTATTATCCAAGATAA+CGG 0.505137 2_2:-54622259 None:intergenic
GCCAATCCCGATCTCGAAGC+AGG 0.506582 2_2:+54613973 Msa0258340:CDS
AGCCGCAGAGCAGTTCAATT+GGG 0.506746 2_2:+54618758 Msa0258340:CDS
GAGTAGAAACCAACTATATG+TGG 0.507004 2_2:+54616722 Msa0258340:CDS
GCGAGGAATGAAGAAGTTGC+TGG 0.508573 2_2:+54614147 Msa0258340:CDS
AGTCCAACTGCAGCAATGGT+TGG 0.508809 2_2:-54617181 None:intergenic
CCGCAGACTGTGGATGAGGA+TGG 0.510661 2_2:+54614177 Msa0258340:CDS
TCCCCAACCATTGCTGCAGT+TGG 0.510791 2_2:+54617178 Msa0258340:CDS
TCATTCAGTCCTTGAAACTC+GGG 0.513438 2_2:-54614868 None:intergenic
GAATGGGTGGTATGATTGGT+TGG 0.514201 2_2:+54622512 Msa0258340:three_prime_UTR
AATTTCCCTATCCATTGCAA+TGG 0.514239 2_2:+54617743 Msa0258340:CDS
CAAACTTTCCTTGGATACAC+TGG 0.514705 2_2:+54615600 Msa0258340:CDS
AATCTACGCTATAGTGAGGC+TGG 0.514725 2_2:+54621142 Msa0258340:CDS
GGTAGCAGTGAGAAGGAGGA+TGG 0.515156 2_2:+54616760 Msa0258340:CDS
ATAACTTGGCACTGACAAGT+TGG 0.515363 2_2:-54621257 None:intergenic
AAGAACGCGGAGTATACGTT+TGG 0.515456 2_2:+54622295 Msa0258340:CDS
CATCTAGACCTCCAACTCCT+GGG 0.515747 2_2:+54618612 Msa0258340:CDS
AACGGTTACAGTTATAGATC+TGG 0.516204 2_2:-54613722 None:intergenic
AGTTATGCGTGAAAGATAGT+AGG 0.516685 2_2:-54622781 None:intergenic
CCTCCATATTTGCTTTGGAA+AGG 0.519150 2_2:-54621310 None:intergenic
GTGCTCAGAAACCATATTTG+AGG 0.520839 2_2:-54617644 None:intergenic
ACCAGTTCCACCTTCTTCAT+GGG 0.521722 2_2:+54613852 Msa0258340:CDS
TCTGGTGAGTGTAGAAGTGA+AGG 0.523207 2_2:-54613704 None:intergenic
CTAAGAACCCCAGGAGTTGG+AGG 0.523552 2_2:-54618620 None:intergenic
GGTTATCTGACCGGAATCAC+CGG 0.527886 2_2:-54613920 None:intergenic
GTTGGCACATGTATCGAGAT+TGG 0.528428 2_2:+54617232 Msa0258340:CDS
CTCAACCTTCACCTGACCAT+TGG 0.528859 2_2:-54614106 None:intergenic
CCGCGTTCTTGCTTACTGCC+AGG 0.530307 2_2:-54622282 None:intergenic
TCCAACTGCAGCAATGGTTG+GGG 0.530330 2_2:-54617179 None:intergenic
TTCCTCGCCGTTCTCCTCAC+CGG 0.531151 2_2:-54614132 None:intergenic
CTCCGTTTCTTCACTGCAGG+CGG 0.531498 2_2:-54614060 None:intergenic
TGGGTTGGCCTGTGAATGAC+AGG 0.532569 2_2:+54622408 Msa0258340:exon
GGGGTACTCCTGTATTCCAC+TGG 0.533008 2_2:+54617764 Msa0258340:CDS
TCAGGTGAAGGTTGAGCAGC+CGG 0.534755 2_2:+54614113 Msa0258340:CDS
GCGGTCTGGATACTGGATGC+AGG 0.534863 2_2:-54616862 None:intergenic
GGTTTCCGGCCAAAATTCTC+CGG 0.535294 2_2:+54613886 Msa0258340:CDS
ATAACACAAATAGACCGCTC+TGG 0.536613 2_2:-54622573 None:intergenic
TTAGTGGTTCTTCCAAACAT+AGG 0.537460 2_2:+54616820 Msa0258340:CDS
CCTCCTCCGCCGGTAGCAAA+CGG 0.539693 2_2:+54614012 Msa0258340:CDS
ATGTACACAAATTAATAACT+CGG 0.540285 2_2:-54622543 None:intergenic
TATACCTGCCAAACAGGGAC+CGG 0.541763 2_2:+54622726 Msa0258340:three_prime_UTR
ATATTAACAGGGAAGGTTGG+AGG 0.541804 2_2:+54621037 Msa0258340:intron
CTGATAGTGTTATCTCTCGT+GGG 0.542089 2_2:+54618791 Msa0258340:CDS
GATAGGGAAATTTAAACCAT+GGG 0.542839 2_2:-54617732 None:intergenic
CTGCTATTGCCAAAGACTAT+GGG 0.543700 2_2:+54622346 Msa0258340:CDS
GTCATTGTTCCTGCTATGGG+AGG 0.544012 2_2:+54614571 Msa0258340:CDS
GCACAGAAATTGACCAACAT+TGG 0.545335 2_2:-54616905 None:intergenic
TTCACCTGACCATTGGTACT+CGG 0.545845 2_2:-54614099 None:intergenic
TGGTCTCCTCTGCTTTATGT+GGG 0.546533 2_2:+54621093 Msa0258340:CDS
CTGACCGGAATCACCGGCAT+TGG 0.547055 2_2:-54613914 None:intergenic
ATTCATTCATAATCTCCAGT+TGG 0.548129 2_2:+54622628 Msa0258340:three_prime_UTR
GGTTTCCTTAATCTCATCCG+TGG 0.548519 2_2:+54617810 Msa0258340:CDS
ACATGAGATCCTCCCATAGC+AGG 0.549471 2_2:-54614580 None:intergenic
TCTGGACTGATGTGGTACCT+TGG 0.550585 2_2:-54622477 None:intergenic
CTTACATTGTGGCTTCTCAC+GGG 0.550965 2_2:+54621287 Msa0258340:CDS
CGCAGACTGTGGATGAGGAT+GGG 0.552092 2_2:+54614178 Msa0258340:CDS
CGGTCTGGATACTGGATGCA+GGG 0.553083 2_2:-54616861 None:intergenic
AAAGAAGACCCTTGTATCAA+GGG 0.554159 2_2:-54614808 None:intergenic
GGATAGGGAAATTTAAACCA+TGG 0.554977 2_2:-54617733 None:intergenic
TGAGCAGCCGGTGAGGAGAA+CGG 0.556833 2_2:+54614125 Msa0258340:CDS
TTTGGAAGAACCACTAAGGT+GGG 0.557173 2_2:-54616814 None:intergenic
TGAAAGTCCAACTGCAGCAA+TGG 0.557943 2_2:-54617185 None:intergenic
CATATAATGAAGGAGCTGCA+GGG 0.557990 2_2:+54615552 Msa0258340:CDS
AGACCAGCAACCATGACTCC+AGG 0.558088 2_2:-54621076 None:intergenic
CTCGCCAACGTTCGGTACAA+TGG 0.559635 2_2:+54613800 Msa0258340:CDS
GAAATTCCGACATATAATGA+AGG 0.561093 2_2:+54615542 Msa0258340:intron
AGTTCCGAGTACCAATGGTC+AGG 0.561177 2_2:+54614095 Msa0258340:CDS
ACATAATTCCAGTGTATCCA+AGG 0.561306 2_2:-54615608 None:intergenic
TATTAACAGGGAAGGTTGGA+GGG 0.561391 2_2:+54621038 Msa0258340:intron
ACTGCAGGCGGTGGAAGCGG+TGG 0.561871 2_2:-54614048 None:intergenic
GTTGCCGCAGACTGTGGATG+AGG 0.562028 2_2:+54614173 Msa0258340:CDS
GTACCCCATTGCAATGGATA+GGG 0.562246 2_2:-54617748 None:intergenic
TCTAGACTTAACCGGCGGTA+AGG 0.562449 2_2:-54613941 None:intergenic
ACGAGACTCCTGTCATTCAC+AGG 0.565424 2_2:-54622416 None:intergenic
TTATTGTCTTTACCTAAACC+AGG 0.567090 2_2:-54614246 None:intergenic
TTCTCCGGCGAGACCAATGC+CGG 0.567124 2_2:+54613901 Msa0258340:CDS
TAAGGCAACTCCTCCTCCGC+CGG 0.568301 2_2:+54614002 Msa0258340:CDS
TTTGGGTTTGGCAATTACAT+GGG 0.568714 2_2:+54617555 Msa0258340:CDS
CTGAATACCATACACACCAA+TGG 0.569880 2_2:-54614506 None:intergenic
CCATATTGTTGAAAGTATGC+GGG 0.570367 2_2:-54621220 None:intergenic
TTCTCGCCGTTTGCTACCGG+CGG 0.571248 2_2:-54614018 None:intergenic
ATGTAAGGCTGAAAATAACT+TGG 0.573317 2_2:-54621271 None:intergenic
ATGGTTGGGGATACAGCCAC+AGG 0.574553 2_2:-54617166 None:intergenic
GGTTCGGGTTCGGACATTGG+TGG 0.575050 2_2:-54613778 None:intergenic
TTCTTAGCCCATGAAGAAGG+TGG 0.575288 2_2:-54613859 None:intergenic
AGTACCCCATTGCAATGGAT+AGG 0.575630 2_2:-54617749 None:intergenic
ATCACCGGCATTGGTCTCGC+CGG 0.577311 2_2:-54613905 None:intergenic
TGGACTACTTATGCCAATGT+TGG 0.577483 2_2:+54616892 Msa0258340:CDS
CATTCATAATCTCCAGTTGG+AGG 0.579940 2_2:+54622631 Msa0258340:three_prime_UTR
GCCATATTGTTGAAAGTATG+CGG 0.580122 2_2:-54621221 None:intergenic
TTTCAGGTTTATCAATCCTG+TGG 0.583287 2_2:+54617150 Msa0258340:intron
TCAGAAACCATATTTGAGGC+AGG 0.584266 2_2:-54617640 None:intergenic
ATAGGAGGAAATTGCTGCAG+TGG 0.584474 2_2:+54614720 Msa0258340:intron
GTTTGGAAGAACCACTAAGG+TGG 0.585745 2_2:-54616815 None:intergenic
CGGCGGTAAGGTTATCTGAC+CGG 0.587559 2_2:-54613929 None:intergenic
CCAGGTTGCCCTTGATACAA+GGG 0.591004 2_2:+54614800 Msa0258340:CDS
GATGGAGTTCCGAGTACCAA+TGG 0.591787 2_2:+54614090 Msa0258340:CDS
TCGATACATGTGCCAACAAG+AGG 0.592425 2_2:-54617226 None:intergenic
ATTGGTACTCGGAACTCCAT+CGG 0.593106 2_2:-54614088 None:intergenic
TGAATGTCGTCAACTGTCCA+AGG 0.593359 2_2:+54622460 Msa0258340:three_prime_UTR
ATATAATGAAGGAGCTGCAG+GGG 0.596382 2_2:+54615553 Msa0258340:CDS
CGGTCAGATAACCTTACCGC+CGG 0.596699 2_2:+54613930 Msa0258340:CDS
TGAAGGTTGAGCAGCCGGTG+AGG 0.598381 2_2:+54614118 Msa0258340:CDS
ATCTTGGATAATACTGTACC+TGG 0.600671 2_2:+54622264 Msa0258340:CDS
AGTCGCGGAATTGGTCTGGA+AGG 0.601125 2_2:+54618641 Msa0258340:CDS
ATGAATCAAAACTAGATACA+TGG 0.602539 2_2:-54622611 None:intergenic
GTGGCGCATGATAGCTTCAA+CGG 0.605217 2_2:-54613745 None:intergenic
CATGTAATTGCCAAACCCAA+AGG 0.608401 2_2:-54617553 None:intergenic
TGGTTCGTTGCCGCAGACTG+TGG 0.608510 2_2:+54614167 Msa0258340:CDS
ACGTTCGGTACAATGGTCAC+CGG 0.609281 2_2:+54613807 Msa0258340:CDS
TATGGGTTGCCAATGAGAGT+TGG 0.609953 2_2:+54622363 Msa0258340:CDS
ACAGGAGTACCCCATTGCAA+TGG 0.611535 2_2:-54617754 None:intergenic
GTGAATGACAGGAGTCTCGT+TGG 0.612059 2_2:+54622419 Msa0258340:exon
CTTTCCAAAGCAAATATGGA+GGG 0.614764 2_2:+54621311 Msa0258340:CDS
CAGGAATCTAACCGAATCCA+CGG 0.616676 2_2:-54617827 None:intergenic
ACTCCTGGGGTTCTTAGTCG+CGG 0.620983 2_2:+54618626 Msa0258340:CDS
GAGTACCAATGGTCAGGTGA+AGG 0.622716 2_2:+54614101 Msa0258340:CDS
GCAGCTCCTTCATTATATGT+CGG 0.622848 2_2:-54615548 None:intergenic
ATTCCGCGACTAAGAACCCC+AGG 0.628826 2_2:-54618629 None:intergenic
TATGTTTGGAAGAACCACTA+AGG 0.629094 2_2:-54616818 None:intergenic
GGTTGCCAATGAGAGTTGGT+CGG 0.630838 2_2:+54622367 Msa0258340:CDS
AGTAGAAACCAACTATATGT+GGG 0.633781 2_2:+54616723 Msa0258340:CDS
CCATCCTCATCCACAGTCTG+CGG 0.635353 2_2:-54614177 None:intergenic
ATGCAATCAAATCATCCCCA+TGG 0.635438 2_2:+54617716 Msa0258340:CDS
TTATTTATACCTGCCAAACA+GGG 0.637416 2_2:+54622721 Msa0258340:three_prime_UTR
CATTGTACCGAACGTTGGCG+AGG 0.638058 2_2:-54613799 None:intergenic
CCACTAAGGTGGGTTTGGAG+CGG 0.641031 2_2:-54616804 None:intergenic
CCTTTCCAAAGCAAATATGG+AGG 0.641808 2_2:+54621310 Msa0258340:CDS
CATTGGTGGAATGAAGCTAG+TGG 0.642631 2_2:-54613764 None:intergenic
AAGAAACGGAGAGACTCCGA+TGG 0.643551 2_2:+54614072 Msa0258340:CDS
CTGCATATATTAGAAATATG+CGG 0.650229 2_2:-54617410 None:intergenic
ATAGCAGGAACAATGACAAG+TGG 0.651348 2_2:-54614565 None:intergenic
GCATGATAGCTTCAACGGAA+CGG 0.652792 2_2:-54613740 None:intergenic
ATCTAGACCTCCAACTCCTG+GGG 0.653295 2_2:+54618613 Msa0258340:CDS
TTTCCAAAGCAAATATGGAG+GGG 0.656358 2_2:+54621312 Msa0258340:CDS
AAACGAGATCTGGACTGATG+TGG 0.658629 2_2:-54622485 None:intergenic
ACGCGGAGTATACGTTTGGT+CGG 0.659264 2_2:+54622299 Msa0258340:CDS
GTGACCATTGTACCGAACGT+TGG 0.661147 2_2:-54613804 None:intergenic
AATGGCTCTTGTGATGTGCG+TGG 0.663958 2_2:+54617789 Msa0258340:CDS
GCTGGAGCCTACAACTACAA+AGG 0.665279 2_2:+54617601 Msa0258340:CDS
CGTGACAAGACCGATAATGC+CGG 0.665920 2_2:-54615405 None:intergenic
GGTCTGGATACTGGATGCAG+GGG 0.677709 2_2:-54616860 None:intergenic
GTCCAATCTACGCTATAGTG+AGG 0.677718 2_2:+54621138 Msa0258340:CDS
AAACTCATACCTTACTAACA+GGG 0.679251 2_2:-54615631 None:intergenic
GCTTCTGGCGTAGATAACGC+CGG 0.683076 2_2:-54613826 None:intergenic
GCATTGCCCACATAAAGCAG+AGG 0.690220 2_2:-54621099 None:intergenic
TATAATGAAGGAGCTGCAGG+GGG 0.691532 2_2:+54615554 Msa0258340:CDS
CCTGGCAGTAAGCAAGAACG+CGG 0.691600 2_2:+54622282 Msa0258340:CDS
AGAAACCAACTATATGTGGG+AGG 0.699469 2_2:+54616726 Msa0258340:CDS
AGCCGGTGAGGAGAACGGCG+AGG 0.711202 2_2:+54614130 Msa0258340:CDS
GCTTCTCTAGACTTAACCGG+CGG 0.711836 2_2:-54613946 None:intergenic
TATGAACTAAGAGATTCACC+TGG 0.712831 2_2:+54614228 Msa0258340:CDS
ATAGGGAAATTTAAACCATG+GGG 0.713448 2_2:-54617731 None:intergenic
TTTCCCTATCCATTGCAATG+GGG 0.717290 2_2:+54617745 Msa0258340:CDS
CACCCAATTGAACTGCTCTG+CGG 0.718427 2_2:-54618760 None:intergenic
TGTACATCAAAGTTCCAGAG+CGG 0.742094 2_2:+54622559 Msa0258340:three_prime_UTR
ATAAGTAGTCCATTTGAACG+CGG 0.755856 2_2:-54616881 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCAATTTTTTAAATTACT+TGG + chr2_2:54614339-54614358 Msa0258340:intron 10.0%
!!! AAACCATTATTTTTTAAATT+TGG - chr2_2:54618222-54618241 None:intergenic 10.0%
!!! TTTTTATTTATTTATTTTGG+AGG + chr2_2:54620617-54620636 Msa0258340:intron 10.0%
!!! ATCTTTAAAATAACAATTAT+TGG - chr2_2:54620699-54620718 None:intergenic 10.0%
!!! TTTTAAAAAAAAGATACATT+TGG + chr2_2:54621512-54621531 Msa0258340:intron 10.0%
!!! TAATTTTCTTCATTTAATTA+GGG - chr2_2:54621558-54621577 None:intergenic 10.0%
!!! TTAATTTTCTTCATTTAATT+AGG - chr2_2:54621559-54621578 None:intergenic 10.0%
!!! TTCAATTTAATCAATTTTGT+CGG + chr2_2:54615007-54615026 Msa0258340:intron 15.0%
!! TTTCATCATAGTATTATTAT+AGG + chr2_2:54615974-54615993 Msa0258340:intron 15.0%
!! GATCCAAATTTAAAAAATAA+TGG + chr2_2:54618216-54618235 Msa0258340:intron 15.0%
!!! AAACTTGAAATCTTATTTAA+GGG - chr2_2:54618355-54618374 None:intergenic 15.0%
!!! AAAACTTGAAATCTTATTTA+AGG - chr2_2:54618356-54618375 None:intergenic 15.0%
!!! TTAATTTGTTTTAACTTTGT+AGG + chr2_2:54618556-54618575 Msa0258340:intron 15.0%
!!! GATTAAAATACTATTTTGAA+AGG - chr2_2:54620026-54620045 None:intergenic 15.0%
!!! AAAGACAAGAATAATAATTT+TGG - chr2_2:54620048-54620067 None:intergenic 15.0%
!! AATATACTTATTATAAGAGT+TGG - chr2_2:54620251-54620270 None:intergenic 15.0%
!! ATATGTTTGGTATATAAAAA+TGG + chr2_2:54620769-54620788 Msa0258340:intron 15.0%
!!! AATTTTCTTCATTTAATTAG+GGG - chr2_2:54621557-54621576 None:intergenic 15.0%
!! ATAAAAAATTCATGATTTAG+TGG + chr2_2:54621985-54622004 Msa0258340:intron 15.0%
!!! TTTATTATTTTTTTGTAAGG+CGG + chr2_2:54622659-54622678 Msa0258340:three_prime_UTR 15.0%
!!! GTTTTGTTTTGTTTTTGTTT+TGG + chr2_2:54614654-54614673 Msa0258340:intron 20.0%
!!! CTTTAGATGATTTTAATTGT+TGG + chr2_2:54615229-54615248 Msa0258340:intron 20.0%
!!! TTCAATTTTACCAAAATTGT+CGG + chr2_2:54615263-54615282 Msa0258340:intron 20.0%
!! TTAATAATCCTTGAAAATCA+AGG - chr2_2:54615312-54615331 None:intergenic 20.0%
!!! GATTTTCAAGGATTATTAAA+TGG + chr2_2:54615313-54615332 Msa0258340:intron 20.0%
!! AATTAATTCTCTCTCATAAA+GGG - chr2_2:54615949-54615968 None:intergenic 20.0%
!! AAATTAATTCTCTCTCATAA+AGG - chr2_2:54615950-54615969 None:intergenic 20.0%
!! ATCATAGTATTATTATAGGT+TGG + chr2_2:54615978-54615997 Msa0258340:intron 20.0%
!! GTTAAATAAAAATCTCAAGA+GGG + chr2_2:54616065-54616084 Msa0258340:intron 20.0%
!!! ACAGAGTTAATATTTGTTTT+TGG + chr2_2:54616102-54616121 Msa0258340:intron 20.0%
!! CCTATATAAATATTCATTTG+AGG - chr2_2:54616501-54616520 None:intergenic 20.0%
!! CCTCAAATGAATATTTATAT+AGG + chr2_2:54616498-54616517 Msa0258340:intron 20.0%
!! TTAAACTATTTACATGTCAT+AGG + chr2_2:54616931-54616950 Msa0258340:intron 20.0%
!! CAAAATAGAAAGAAACAAAA+AGG - chr2_2:54617854-54617873 None:intergenic 20.0%
!! TCCAATCAAAAAAAATATCT+CGG + chr2_2:54617938-54617957 Msa0258340:intron 20.0%
!!! TTCATTAAGGATATTTTGTT+AGG - chr2_2:54618059-54618078 None:intergenic 20.0%
!! AACAAAATATCCTTAATGAA+TGG + chr2_2:54618059-54618078 Msa0258340:intron 20.0%
!!! ATTGTTTTATTTTTCAGTTC+AGG + chr2_2:54618273-54618292 Msa0258340:intron 20.0%
!! AAATAAAAGTAGACTAACAA+AGG - chr2_2:54618923-54618942 None:intergenic 20.0%
!!! ACTGATTTTCATATACTTTA+GGG + chr2_2:54619261-54619280 Msa0258340:intron 20.0%
!!! TACTTATTATTTTAGAGGAT+AGG + chr2_2:54619317-54619336 Msa0258340:intron 20.0%
!!! AGCATATATCACTTTTTTTA+AGG - chr2_2:54619786-54619805 None:intergenic 20.0%
!! ATTATTATTCTTGTCTTTCA+AGG + chr2_2:54620050-54620069 Msa0258340:intron 20.0%
!! TATTATAAGAGTTGGAAAAT+AGG - chr2_2:54620243-54620262 None:intergenic 20.0%
!! ATTACATGTTATAGATTCAA+AGG + chr2_2:54620351-54620370 Msa0258340:intron 20.0%
!! AATGGCAATTCAAAAAATAT+TGG - chr2_2:54620426-54620445 None:intergenic 20.0%
!! AATTGCAAAAAAGTTATCAT+AGG - chr2_2:54620459-54620478 None:intergenic 20.0%
!!! ATGATAACTTTTTTGCAATT+TGG + chr2_2:54620459-54620478 Msa0258340:intron 20.0%
!! ATATACCAAACATATTGATA+GGG - chr2_2:54620764-54620783 None:intergenic 20.0%
!! TATATACCAAACATATTGAT+AGG - chr2_2:54620765-54620784 None:intergenic 20.0%
!! AGTAAAAGCAAAATTAAACA+TGG - chr2_2:54621017-54621036 None:intergenic 20.0%
!!! TTTGCTTTTACTATATTAAC+AGG + chr2_2:54621025-54621044 Msa0258340:intron 20.0%
!!! TTGCTTTTACTATATTAACA+GGG + chr2_2:54621026-54621045 Msa0258340:intron 20.0%
!!! TGTATCTTGAACTTTAAAAA+GGG - chr2_2:54621484-54621503 None:intergenic 20.0%
!!! ATGTATCTTGAACTTTAAAA+AGG - chr2_2:54621485-54621504 None:intergenic 20.0%
!! TCTATTCATTTACAAAATCA+TGG - chr2_2:54621763-54621782 None:intergenic 20.0%
!! AATTTCACTATTGAATATGT+GGG - chr2_2:54621791-54621810 None:intergenic 20.0%
!! ATACATCTCTCAATTAAAAA+TGG - chr2_2:54622112-54622131 None:intergenic 20.0%
!! ATGTACACAAATTAATAACT+CGG - chr2_2:54622546-54622565 None:intergenic 20.0%
!!! TTATTATTTTTTTGTAAGGC+GGG + chr2_2:54622660-54622679 Msa0258340:three_prime_UTR 20.0%
!! ATATACTAACTAAAACTTTC+CGG - chr2_2:54622748-54622767 None:intergenic 20.0%
!! CATTGCTTATGATTTTACTT+AGG + chr2_2:54614428-54614447 Msa0258340:intron 25.0%
!! TGATGAATTTTTCTTCTTCA+TGG + chr2_2:54614471-54614490 Msa0258340:intron 25.0%
!! CAGCATTATGTTTCTATATT+AGG + chr2_2:54614526-54614545 Msa0258340:CDS 25.0%
!!! ACATTGTTGCATACATTTTT+TGG + chr2_2:54614775-54614794 Msa0258340:CDS 25.0%
!!! CATTGTTGCATACATTTTTT+GGG + chr2_2:54614776-54614795 Msa0258340:CDS 25.0%
!!! ATTTTAATACCCCATTTTGT+GGG + chr2_2:54614922-54614941 Msa0258340:intron 25.0%
!!! TTATTGTTGTTGTTGTTTAG+CGG + chr2_2:54614956-54614975 Msa0258340:intron 25.0%
! TACACTATAAACTTCTTTGA+CGG + chr2_2:54615472-54615491 Msa0258340:intron 25.0%
! AAACAATGAAGCATGTTTAA+AGG - chr2_2:54615688-54615707 None:intergenic 25.0%
! AAAACTATAGCAGATAATGT+TGG + chr2_2:54615769-54615788 Msa0258340:intron 25.0%
! AAACTATAGCAGATAATGTT+GGG + chr2_2:54615770-54615789 Msa0258340:intron 25.0%
! ATTGCATAGTGCTTAAATAT+AGG + chr2_2:54615833-54615852 Msa0258340:intron 25.0%
! GAAAAAGATGTAACATAATC+AGG + chr2_2:54616002-54616021 Msa0258340:intron 25.0%
! TGTATTGTTAAAGGAATGAA+AGG + chr2_2:54616027-54616046 Msa0258340:intron 25.0%
! GTATTGTTAAAGGAATGAAA+GGG + chr2_2:54616028-54616047 Msa0258340:intron 25.0%
! TATTGTTAAAGGAATGAAAG+GGG + chr2_2:54616029-54616048 Msa0258340:intron 25.0%
! GGTTAAATAAAAATCTCAAG+AGG + chr2_2:54616064-54616083 Msa0258340:intron 25.0%
!!! TTGTTTTTGGTCATCTATTT+TGG + chr2_2:54616115-54616134 Msa0258340:intron 25.0%
! TAAACACGATCTTTAATAAC+TGG + chr2_2:54616177-54616196 Msa0258340:intron 25.0%
!! ACAAATTTTCCATTCGATAA+TGG + chr2_2:54616311-54616330 Msa0258340:intron 25.0%
! CAAAAATAAATCAAGAGGAA+CGG - chr2_2:54616351-54616370 None:intergenic 25.0%
!! AAATATTCATTTGAGGCAAA+TGG - chr2_2:54616494-54616513 None:intergenic 25.0%
! GCTTCAAATGACTATTTATA+TGG + chr2_2:54616668-54616687 Msa0258340:intron 25.0%
!! TGTTTCATATCTCAATTTTC+AGG + chr2_2:54617134-54617153 Msa0258340:intron 25.0%
! CTGCATATATTAGAAATATG+CGG - chr2_2:54617413-54617432 None:intergenic 25.0%
!!! TTTTTTTTTACCTGATTTGC+AGG + chr2_2:54617528-54617547 Msa0258340:intron 25.0%
!!! TTTCTTTCTATTTTGTTTCC+TGG + chr2_2:54617859-54617878 Msa0258340:intron 25.0%
!! GTCATAATTTTTATTGAGCT+TGG - chr2_2:54618031-54618050 None:intergenic 25.0%
! GCTCAATAAAAATTATGACT+TGG + chr2_2:54618032-54618051 Msa0258340:intron 25.0%
! ATCATGTAAACCATTCATTA+AGG - chr2_2:54618072-54618091 None:intergenic 25.0%
!!! TTTGTTTTAACTTTGTAGGT+TGG + chr2_2:54618560-54618579 Msa0258340:intron 25.0%
!! ATGAACATTTTCAGTTAAAG+TGG - chr2_2:54618714-54618733 None:intergenic 25.0%
! TTTCTAACATCTTAATAGCA+TGG - chr2_2:54619232-54619251 None:intergenic 25.0%
!!! GACTGATTTTCATATACTTT+AGG + chr2_2:54619260-54619279 Msa0258340:intron 25.0%
!!! GTGACTACTTATTATTTTAG+AGG + chr2_2:54619312-54619331 Msa0258340:intron 25.0%
!!! TTTTAGAGGATAGGAAATAT+AGG + chr2_2:54619326-54619345 Msa0258340:intron 25.0%
! TTTAGAGGATAGGAAATATA+GGG + chr2_2:54619327-54619346 Msa0258340:intron 25.0%
! ATAGGAAATATAGGGAAAAA+TGG + chr2_2:54619335-54619354 Msa0258340:intron 25.0%
! ACAATAATCAAACTGAAAGA+GGG - chr2_2:54619882-54619901 None:intergenic 25.0%
! AACAATAATCAAACTGAAAG+AGG - chr2_2:54619883-54619902 None:intergenic 25.0%
!!! ATTTTGAAAGGAATGTGATA+GGG - chr2_2:54620014-54620033 None:intergenic 25.0%
!!! TATTTTGAAAGGAATGTGAT+AGG - chr2_2:54620015-54620034 None:intergenic 25.0%
! TAAACTATAACACATAACAG+CGG - chr2_2:54620393-54620412 None:intergenic 25.0%
! AATTCAAAAAATATTGGCCA+CGG - chr2_2:54620420-54620439 None:intergenic 25.0%
!!! CTCTATTATTGTGTTTTGTT+TGG + chr2_2:54620720-54620739 Msa0258340:intron 25.0%
! AAATTTATCATCAAACTGCA+TGG + chr2_2:54620804-54620823 Msa0258340:intron 25.0%
! ACGATGAATGATTAGATATT+AGG + chr2_2:54620873-54620892 Msa0258340:intron 25.0%
! AATCTGCAATAAATGAATCT+AGG - chr2_2:54620913-54620932 None:intergenic 25.0%
!! TTTTACTATATTAACAGGGA+AGG + chr2_2:54621030-54621049 Msa0258340:intron 25.0%
! TCTCGCAATATCATAATAAT+TGG + chr2_2:54621169-54621188 Msa0258340:CDS 25.0%
!! AATCTTATGCTTGATTTTGA+TGG + chr2_2:54621368-54621387 Msa0258340:intron 25.0%
! TTAAAAAGGGTCTTACAAAA+GGG - chr2_2:54621471-54621490 None:intergenic 25.0%
! TTTAAAAAGGGTCTTACAAA+AGG - chr2_2:54621472-54621491 None:intergenic 25.0%
! ATGATTGTGCTTTAATCAAA+AGG + chr2_2:54621674-54621693 Msa0258340:intron 25.0%
! TGATTGTGCTTTAATCAAAA+GGG + chr2_2:54621675-54621694 Msa0258340:intron 25.0%
!! ATCAAAAGGGTCTTATATTT+AGG + chr2_2:54621688-54621707 Msa0258340:intron 25.0%
!! TCAAAAGGGTCTTATATTTA+GGG + chr2_2:54621689-54621708 Msa0258340:intron 25.0%
! CAATTTCACTATTGAATATG+TGG - chr2_2:54621792-54621811 None:intergenic 25.0%
! TCAAGTGCTAAAAATAACAA+TGG - chr2_2:54622057-54622076 None:intergenic 25.0%
!!! ATTCACAACTGATTTTAGAA+AGG - chr2_2:54622164-54622183 None:intergenic 25.0%
! TACAGTATTATCCAAGATAA+CGG - chr2_2:54622262-54622281 None:intergenic 25.0%
! CGACATTCATATACTAAAAA+TGG - chr2_2:54622449-54622468 None:intergenic 25.0%
! ATGAATCAAAACTAGATACA+TGG - chr2_2:54622614-54622633 None:intergenic 25.0%
! TAATAAAAAATACCTCCAAC+TGG - chr2_2:54622646-54622665 None:intergenic 25.0%
TTATTGTCTTTACCTAAACC+AGG - chr2_2:54614249-54614268 None:intergenic 30.0%
ATTGTTATCTGATGTGTTAG+TGG + chr2_2:54614695-54614714 Msa0258340:intron 30.0%
!! GATTTTAATACCCCATTTTG+TGG + chr2_2:54614921-54614940 Msa0258340:intron 30.0%
!!! GTTTAGCGGATTTTAATTGT+TGG + chr2_2:54614970-54614989 Msa0258340:intron 30.0%
ACATTATTGTTCCAACAAAC+CGG + chr2_2:54615129-54615148 Msa0258340:intron 30.0%
!!! TCTTATAACGGTTTTGTTGT+TGG + chr2_2:54615161-54615180 Msa0258340:intron 30.0%
TGGTTATTCATGAGATGTAA+CGG + chr2_2:54615181-54615200 Msa0258340:intron 30.0%
ACATTATTGTTCCAACTAAC+CGG + chr2_2:54615386-54615405 Msa0258340:CDS 30.0%
TAGATGTAACAGACTTTGAA+TGG + chr2_2:54615449-54615468 Msa0258340:intron 30.0%
AACTTCTTTGACGGAATAAT+TGG + chr2_2:54615481-54615500 Msa0258340:intron 30.0%
GAAATTCCGACATATAATGA+AGG + chr2_2:54615542-54615561 Msa0258340:intron 30.0%
AAACTCATACCTTACTAACA+GGG - chr2_2:54615634-54615653 None:intergenic 30.0%
TAAACTCATACCTTACTAAC+AGG - chr2_2:54615635-54615654 None:intergenic 30.0%
TGTTAGTAAGGTATGAGTTT+AGG + chr2_2:54615634-54615653 Msa0258340:intron 30.0%
GTTAGTAAGGTATGAGTTTA+GGG + chr2_2:54615635-54615654 Msa0258340:intron 30.0%
!!! TTTAGGGATTTTGTTTTTCC+TGG + chr2_2:54615651-54615670 Msa0258340:intron 30.0%
TTAAAGGCAAATAAAAAGCC+AGG - chr2_2:54615672-54615691 None:intergenic 30.0%
ATTGAGGCAATACATAATGT+AGG + chr2_2:54615718-54615737 Msa0258340:intron 30.0%
! AATCAGGAGTGTATTGTTAA+AGG + chr2_2:54616018-54616037 Msa0258340:intron 30.0%
ATAACTTTCAGTCACCATAT+AGG + chr2_2:54616208-54616227 Msa0258340:intron 30.0%
CTTAAACTTGATCTCCTATA+TGG - chr2_2:54616225-54616244 None:intergenic 30.0%
TACATATGACCATTATCGAA+TGG - chr2_2:54616323-54616342 None:intergenic 30.0%
!! CGTTCCTCTTGATTTATTTT+TGG + chr2_2:54616349-54616368 Msa0258340:intron 30.0%
AGTAAACAGACAAAACAGAA+TGG - chr2_2:54616409-54616428 None:intergenic 30.0%
! TGTTGACTATGACATTATCA+GGG - chr2_2:54616459-54616478 None:intergenic 30.0%
! TTGTTGACTATGACATTATC+AGG - chr2_2:54616460-54616479 None:intergenic 30.0%
AGTAGAAACCAACTATATGT+GGG + chr2_2:54616723-54616742 Msa0258340:CDS 30.0%
ACCATAATTTGATCACTGTT+GGG + chr2_2:54617093-54617112 Msa0258340:intron 30.0%
! GGACTTTCATTTTATGGTTA+TGG + chr2_2:54617199-54617218 Msa0258340:CDS 30.0%
TGGTGCAATACAAATATTAG+TGG + chr2_2:54617252-54617271 Msa0258340:CDS 30.0%
TGGATTCAACAAACTTACAA+GGG - chr2_2:54617290-54617309 None:intergenic 30.0%
ATCAATACAATAGACACAGT+GGG - chr2_2:54617317-54617336 None:intergenic 30.0%
CTGCAGAAAGCAATAAAAAA+TGG - chr2_2:54617361-54617380 None:intergenic 30.0%
!! GAAATTTATTTTCACTGCAG+TGG - chr2_2:54617470-54617489 None:intergenic 30.0%
ATAGGGAAATTTAAACCATG+GGG - chr2_2:54617734-54617753 None:intergenic 30.0%
GATAGGGAAATTTAAACCAT+GGG - chr2_2:54617735-54617754 None:intergenic 30.0%
TAGAAAGAAACAAAAAGGAC+AGG - chr2_2:54617849-54617868 None:intergenic 30.0%
AAGATAAATAAATGCAGTCC+AGG - chr2_2:54617880-54617899 None:intergenic 30.0%
!!! GCCGAGATATTTTTTTTGAT+TGG - chr2_2:54617942-54617961 None:intergenic 30.0%
AATGAATGGTTTACATGATG+AGG + chr2_2:54618073-54618092 Msa0258340:intron 30.0%
AACTGCAAGATTGATATCAA+CGG + chr2_2:54618146-54618165 Msa0258340:intron 30.0%
AAAAAACAGACTAAAGAGAC+TGG + chr2_2:54618172-54618191 Msa0258340:intron 30.0%
AGAGTTTACTGATCTATGAA+AGG + chr2_2:54618442-54618461 Msa0258340:intron 30.0%
TACAATTGCTGTGACTAAAA+TGG + chr2_2:54618733-54618752 Msa0258340:CDS 30.0%
ACAATTGCTGTGACTAAAAT+GGG + chr2_2:54618734-54618753 Msa0258340:CDS 30.0%
!! ATGTGCTAATTGTTCTGAAA+GGG - chr2_2:54618976-54618995 None:intergenic 30.0%
! AATGTGCTAATTGTTCTGAA+AGG - chr2_2:54618977-54618996 None:intergenic 30.0%
! AGAAAAAGTGATGCTTTTGA+AGG - chr2_2:54619143-54619162 None:intergenic 30.0%
ATATGCTTCAGAGACTAAAT+CGG - chr2_2:54619166-54619185 None:intergenic 30.0%
! ATACTTTAGGGACTAAATTG+AGG + chr2_2:54619273-54619292 Msa0258340:intron 30.0%
! TACTTTAGGGACTAAATTGA+GGG + chr2_2:54619274-54619293 Msa0258340:intron 30.0%
AACTCAAAAGTTGTATTGGA+GGG - chr2_2:54619509-54619528 None:intergenic 30.0%
ACAAAATTCTCCTCATATGT+GGG - chr2_2:54619532-54619551 None:intergenic 30.0%
TACAAAATTCTCCTCATATG+TGG - chr2_2:54619533-54619552 None:intergenic 30.0%
!!! TTTTGCTATTTTTCAACGTC+TGG - chr2_2:54620105-54620124 None:intergenic 30.0%
! TGATTCTCTTATCTTGTTTC+TGG + chr2_2:54620154-54620173 Msa0258340:intron 30.0%
TTGTTCTTAACAAGCCTATA+TGG + chr2_2:54620270-54620289 Msa0258340:intron 30.0%
GAAGTTAATGCAATCCATAT+AGG - chr2_2:54620287-54620306 None:intergenic 30.0%
GCAAAAAAGTTATCATAGGT+AGG - chr2_2:54620455-54620474 None:intergenic 30.0%
CTACGACTGAAAAAAATCAT+TGG - chr2_2:54620546-54620565 None:intergenic 30.0%
ATAAAAACAGAGAAGCTCAA+GGG - chr2_2:54620582-54620601 None:intergenic 30.0%
!! CAAAAAAGTACTACTAGGAT+GGG - chr2_2:54620659-54620678 None:intergenic 30.0%
!! TGAAGCAAAAAAGTACTACT+AGG - chr2_2:54620664-54620683 None:intergenic 30.0%
AAACATATTGATAGGGAAAC+TGG - chr2_2:54620757-54620776 None:intergenic 30.0%
AGTTTCCCTATCAATATGTT+TGG + chr2_2:54620756-54620775 Msa0258340:intron 30.0%
ATAAAATTGAGTTCTTGCAC+TGG + chr2_2:54620832-54620851 Msa0258340:intron 30.0%
ATTCATTTATTGCAGATTGC+TGG + chr2_2:54620915-54620934 Msa0258340:intron 30.0%
ATGTAAGGCTGAAAATAACT+TGG - chr2_2:54621274-54621293 None:intergenic 30.0%
! TTATTTTCAGCCTTACATTG+TGG + chr2_2:54621276-54621295 Msa0258340:CDS 30.0%
CATAAGATTTGCAGTAGTAA+AGG - chr2_2:54621357-54621376 None:intergenic 30.0%
! AAAGGGTCTTATATATAACG+CGG - chr2_2:54621431-54621450 None:intergenic 30.0%
! GACAGCAAAATTTTGCAAAA+GGG - chr2_2:54621448-54621467 None:intergenic 30.0%
TAAAAAGGGTCTTACAAAAG+GGG - chr2_2:54621470-54621489 None:intergenic 30.0%
!!! TACCATGATGTTGTTTTCAT+AGG - chr2_2:54621725-54621744 None:intergenic 30.0%
ATGCAGGATGCTATAAAAAA+AGG - chr2_2:54621880-54621899 None:intergenic 30.0%
CTCAATTAAAAATGGACGTA+AGG - chr2_2:54622104-54622123 None:intergenic 30.0%
ATTCATTCATAATCTCCAGT+TGG + chr2_2:54622628-54622647 Msa0258340:three_prime_UTR 30.0%
ATTATTTATACCTGCCAAAC+AGG + chr2_2:54622720-54622739 Msa0258340:three_prime_UTR 30.0%
TTATTTATACCTGCCAAACA+GGG + chr2_2:54622721-54622740 Msa0258340:three_prime_UTR 30.0%
AGTGTAGAAGTGAAGGTTTA+GGG - chr2_2:54613700-54613719 None:intergenic 35.0%
AACGGTTACAGTTATAGATC+TGG - chr2_2:54613725-54613744 None:intergenic 35.0%
TATGAACTAAGAGATTCACC+TGG + chr2_2:54614228-54614247 Msa0258340:CDS 35.0%
!!! ATGGTTGTTTTAGTTCCCAT+TGG + chr2_2:54614490-54614509 Msa0258340:intron 35.0%
TGAATACCATACACACCAAT+GGG - chr2_2:54614508-54614527 None:intergenic 35.0%
AAAGAAGACCCTTGTATCAA+GGG - chr2_2:54614811-54614830 None:intergenic 35.0%
AAAAGAAGACCCTTGTATCA+AGG - chr2_2:54614812-54614831 None:intergenic 35.0%
!! AGGGTCTTCTTTTGTTTATC+TGG + chr2_2:54614819-54614838 Msa0258340:CDS 35.0%
TTCATTCAGTCCTTGAAACT+CGG - chr2_2:54614872-54614891 None:intergenic 35.0%
! ACAGCTTTATCCCACAAAAT+GGG - chr2_2:54614935-54614954 None:intergenic 35.0%
! CAATTTTGTCGGTCGTATAA+TGG + chr2_2:54615018-54615037 Msa0258340:intron 35.0%
!! GGTTTGTTGGAACAATAATG+TGG - chr2_2:54615130-54615149 None:intergenic 35.0%
CGTTATAAGACTGAAAATGC+CGG - chr2_2:54615151-54615170 None:intergenic 35.0%
!! CGGCATTTTCAGTCTTATAA+CGG + chr2_2:54615149-54615168 Msa0258340:intron 35.0%
GGTTATTCATGAGATGTAAC+GGG + chr2_2:54615182-54615201 Msa0258340:intron 35.0%
! CAAAATTGTCGGTCTTGTAA+CGG + chr2_2:54615274-54615293 Msa0258340:intron 35.0%
!! TCTGCTTTTCAAACTTTCCT+TGG + chr2_2:54615591-54615610 Msa0258340:CDS 35.0%
ACATAATTCCAGTGTATCCA+AGG - chr2_2:54615611-54615630 None:intergenic 35.0%
GAATTATGTCCCTGTTAGTA+AGG + chr2_2:54615622-54615641 Msa0258340:CDS 35.0%
ATAATGTAGGTAACTCCTAG+TGG + chr2_2:54615731-54615750 Msa0258340:intron 35.0%
ACTTAAATCTCTCAACCACT+AGG - chr2_2:54615749-54615768 None:intergenic 35.0%
TAGTGCTTAAATATAGGACC+TGG + chr2_2:54615839-54615858 Msa0258340:intron 35.0%
! ATGAAAGGGGTCTTATAAGA+AGG + chr2_2:54616042-54616061 Msa0258340:intron 35.0%
! TGAAAGGGGTCTTATAAGAA+GGG + chr2_2:54616043-54616062 Msa0258340:intron 35.0%
TCAAGAGGGACTTGTATTTA+GGG + chr2_2:54616079-54616098 Msa0258340:intron 35.0%
CACGATCTTTAATAACTGGT+CGG + chr2_2:54616181-54616200 Msa0258340:intron 35.0%
ATCTTTAATAACTGGTCGGT+TGG + chr2_2:54616185-54616204 Msa0258340:intron 35.0%
CGGTCCAAAAATAAATCAAG+AGG - chr2_2:54616356-54616375 None:intergenic 35.0%
TAAAACCTCTCACGTTTAGT+TGG - chr2_2:54616563-54616582 None:intergenic 35.0%
!!! TAAACGTGAGAGGTTTTAGA+GGG + chr2_2:54616565-54616584 Msa0258340:intron 35.0%
GAGTAGAAACCAACTATATG+TGG + chr2_2:54616722-54616741 Msa0258340:CDS 35.0%
TAAAACCTCCCACATATAGT+TGG - chr2_2:54616734-54616753 None:intergenic 35.0%
!!! TATATGTGGGAGGTTTTAGA+GGG + chr2_2:54616736-54616755 Msa0258340:CDS 35.0%
TATGTTTGGAAGAACCACTA+AGG - chr2_2:54616821-54616840 None:intergenic 35.0%
TTAGTGGTTCTTCCAAACAT+AGG + chr2_2:54616820-54616839 Msa0258340:CDS 35.0%
GGACTATTTACTCCTATGTT+TGG - chr2_2:54616835-54616854 None:intergenic 35.0%
ATAAGTAGTCCATTTGAACG+CGG - chr2_2:54616884-54616903 None:intergenic 35.0%
TTCAGTACAAAAAGCTACTG+TGG - chr2_2:54616973-54616992 None:intergenic 35.0%
!! GTATTATTTTTCACCCGCTA+TGG + chr2_2:54617000-54617019 Msa0258340:intron 35.0%
CACCATAATTTGATCACTGT+TGG + chr2_2:54617092-54617111 Msa0258340:intron 35.0%
ACCCAACAGTGATCAAATTA+TGG - chr2_2:54617097-54617116 None:intergenic 35.0%
!! TTTCAGGTTTATCAATCCTG+TGG + chr2_2:54617150-54617169 Msa0258340:intron 35.0%
! GCAGTTGGACTTTCATTTTA+TGG + chr2_2:54617193-54617212 Msa0258340:CDS 35.0%
CTGGATTCAACAAACTTACA+AGG - chr2_2:54617291-54617310 None:intergenic 35.0%
GATCAATACAATAGACACAG+TGG - chr2_2:54617318-54617337 None:intergenic 35.0%
CTTCGTAAGATATCTGTTCT+TGG + chr2_2:54617384-54617403 Msa0258340:CDS 35.0%
! TTTGGGTTTGGCAATTACAT+GGG + chr2_2:54617555-54617574 Msa0258340:CDS 35.0%
AAACATACCTGCCTCAAATA+TGG + chr2_2:54617633-54617652 Msa0258340:CDS 35.0%
GGATAGGGAAATTTAAACCA+TGG - chr2_2:54617736-54617755 None:intergenic 35.0%
AATTTCCCTATCCATTGCAA+TGG + chr2_2:54617743-54617762 Msa0258340:CDS 35.0%
ATTTCCCTATCCATTGCAAT+GGG + chr2_2:54617744-54617763 Msa0258340:CDS 35.0%
CTTGACTCTGAATATGTTGA+TGG + chr2_2:54617897-54617916 Msa0258340:intron 35.0%
TTGCAGTTAAGAAGAAGTGA+CGG - chr2_2:54618134-54618153 None:intergenic 35.0%
GTGAAAACAGTAAGACAAGT+TGG - chr2_2:54618245-54618264 None:intergenic 35.0%
TATAGTCACTGTACTGTGTT+TGG + chr2_2:54618528-54618547 Msa0258340:intron 35.0%
GTAAATGCAAGTACAACAGA+AGG - chr2_2:54618831-54618850 None:intergenic 35.0%
GTTGTACTTGCATTTACCTT+TGG + chr2_2:54618834-54618853 Msa0258340:intron 35.0%
TGAGATTGTGTAATATACCC+TGG + chr2_2:54618943-54618962 Msa0258340:intron 35.0%
TCTGAAAGGGTTTAATACCA+GGG - chr2_2:54618963-54618982 None:intergenic 35.0%
! TTCTGAAAGGGTTTAATACC+AGG - chr2_2:54618964-54618983 None:intergenic 35.0%
GAGCATTTGTATAAAATGCG+AGG + chr2_2:54619035-54619054 Msa0258340:intron 35.0%
ACAATAATCCATAACAAGCG+AGG + chr2_2:54619077-54619096 Msa0258340:intron 35.0%
ACTCAAAAGTTGTATTGGAG+GGG - chr2_2:54619508-54619527 None:intergenic 35.0%
GAACTCAAAAGTTGTATTGG+AGG - chr2_2:54619510-54619529 None:intergenic 35.0%
TGGGAACTCAAAAGTTGTAT+TGG - chr2_2:54619513-54619532 None:intergenic 35.0%
AAGAAATAGAGGACTTTGAG+AGG - chr2_2:54619587-54619606 None:intergenic 35.0%
! CTTTGTTTGTGAGTTTGGAA+GGG - chr2_2:54619646-54619665 None:intergenic 35.0%
!! TTTTGGGAGGATATTTGAGT+GGG + chr2_2:54619958-54619977 Msa0258340:intron 35.0%
!! GTTGTAACAAAAAGCACCAA+AGG - chr2_2:54620212-54620231 None:intergenic 35.0%
!! AAGACAGAAGTTTTGACCTT+GGG - chr2_2:54620311-54620330 None:intergenic 35.0%
AAAACTTCTGTCTTGAAAGC+TGG + chr2_2:54620317-54620336 Msa0258340:intron 35.0%
GTGTTATAGTTTAGAAACCG+TGG + chr2_2:54620400-54620419 Msa0258340:intron 35.0%
!! TGCAATTTGGTGTGAATTTC+TGG + chr2_2:54620472-54620491 Msa0258340:intron 35.0%
GTGTCGAAGTCTAAATACTT+TGG + chr2_2:54620494-54620513 Msa0258340:intron 35.0%
GGATTGAGTCATAACTCATA+AGG - chr2_2:54620525-54620544 None:intergenic 35.0%
CATAAAAACAGAGAAGCTCA+AGG - chr2_2:54620583-54620602 None:intergenic 35.0%
!! GCAAAAAAGTACTACTAGGA+TGG - chr2_2:54620660-54620679 None:intergenic 35.0%
!!! TCTTGCACTGGTTGTATTTT+TGG + chr2_2:54620844-54620863 Msa0258340:intron 35.0%
ACTATATTAACAGGGAAGGT+TGG + chr2_2:54621034-54621053 Msa0258340:intron 35.0%
! CCATATTGTTGAAAGTATGC+GGG - chr2_2:54621223-54621242 None:intergenic 35.0%
! GCCATATTGTTGAAAGTATG+CGG - chr2_2:54621224-54621243 None:intergenic 35.0%
CTTTCCAAAGCAAATATGGA+GGG + chr2_2:54621311-54621330 Msa0258340:CDS 35.0%
TTTCCAAAGCAAATATGGAG+GGG + chr2_2:54621312-54621331 Msa0258340:CDS 35.0%
! GGACAGCAAAATTTTGCAAA+AGG - chr2_2:54621449-54621468 None:intergenic 35.0%
! AAGGGTCTTATATTTAGGGT+AGG + chr2_2:54621693-54621712 Msa0258340:intron 35.0%
AGCCTATGAAAACAACATCA+TGG + chr2_2:54621720-54621739 Msa0258340:intron 35.0%
AGATCAATTGTCTACTGCTT+TGG + chr2_2:54621838-54621857 Msa0258340:intron 35.0%
! TTGATAGTCGTCTTAACTTG+TGG + chr2_2:54622029-54622048 Msa0258340:intron 35.0%
GGAAATAGTTCAACTGCAAA+AGG - chr2_2:54622194-54622213 None:intergenic 35.0%
ATCTTGGATAATACTGTACC+TGG + chr2_2:54622264-54622283 Msa0258340:CDS 35.0%
!! CAGATCTCGTTTTGTTGAAT+GGG + chr2_2:54622496-54622515 Msa0258340:three_prime_UTR 35.0%
AGTTATGCGTGAAAGATAGT+AGG - chr2_2:54622784-54622803 None:intergenic 35.0%
TACTATCTTTCACGCATAAC+TGG + chr2_2:54622783-54622802 Msa0258340:three_prime_UTR 35.0%
TTCACTCTCTTTATCTTCGC+CGG + chr2_2:54613645-54613664 Msa0258340:five_prime_UTR 40.0%
!! TGAAGGTTTAGGGTTTTGTG+TGG - chr2_2:54613690-54613709 None:intergenic 40.0%
GAGTGTAGAAGTGAAGGTTT+AGG - chr2_2:54613701-54613720 None:intergenic 40.0%
! GTTTTCTTAGCCCATGAAGA+AGG - chr2_2:54613865-54613884 None:intergenic 40.0%
! TCTTCATGGGCTAAGAAAAC+CGG + chr2_2:54613865-54613884 Msa0258340:CDS 40.0%
TCAGCTTCTCTAGACTTAAC+CGG - chr2_2:54613952-54613971 None:intergenic 40.0%
! ATGAGGATGGGTTTGCTTTA+AGG + chr2_2:54614190-54614209 Msa0258340:CDS 40.0%
CTAAGAGATTCACCTGGTTT+AGG + chr2_2:54614234-54614253 Msa0258340:CDS 40.0%
!! ATCTATGAAGCACTGACACA+CGG - chr2_2:54614393-54614412 None:intergenic 40.0%
TTAGTTCCCATTGGTGTGTA+TGG + chr2_2:54614499-54614518 Msa0258340:intron 40.0%
CTGAATACCATACACACCAA+TGG - chr2_2:54614509-54614528 None:intergenic 40.0%
ATAGCAGGAACAATGACAAG+TGG - chr2_2:54614568-54614587 None:intergenic 40.0%
ACTTGTCATTGTTCCTGCTA+TGG + chr2_2:54614567-54614586 Msa0258340:CDS 40.0%
CTTGTCATTGTTCCTGCTAT+GGG + chr2_2:54614568-54614587 Msa0258340:CDS 40.0%
TCTGATGTGTTAGTGGCTAT+AGG + chr2_2:54614702-54614721 Msa0258340:intron 40.0%
!!! TGCATACATTTTTTGGGTCC+AGG + chr2_2:54614782-54614801 Msa0258340:CDS 40.0%
!! TGTTTATCTGGCTCCAGTTT+TGG + chr2_2:54614831-54614850 Msa0258340:CDS 40.0%
!! GAGTTGATGATTGCCAAAAC+TGG - chr2_2:54614847-54614866 None:intergenic 40.0%
TCATTCAGTCCTTGAAACTC+GGG - chr2_2:54614871-54614890 None:intergenic 40.0%
! CAGCTTTATCCCACAAAATG+GGG - chr2_2:54614934-54614953 None:intergenic 40.0%
! CACAGCTTTATCCCACAAAA+TGG - chr2_2:54614936-54614955 None:intergenic 40.0%
! TAATGGTTTTCCTTGTTCCC+CGG + chr2_2:54615035-54615054 Msa0258340:intron 40.0%
ACTTAATCCTTGAAACTCCG+GGG - chr2_2:54615055-54615074 None:intergenic 40.0%
CACTTAATCCTTGAAACTCC+GGG - chr2_2:54615056-54615075 None:intergenic 40.0%
CCACTTAATCCTTGAAACTC+CGG - chr2_2:54615057-54615076 None:intergenic 40.0%
!! AACGGGCTTTGAATTGTAAG+CGG + chr2_2:54615199-54615218 Msa0258340:intron 40.0%
! CGTTACAAGACCGACAATTT+TGG - chr2_2:54615276-54615295 None:intergenic 40.0%
!! GCTGGTTTCCTTGATTTTCA+AGG + chr2_2:54615301-54615320 Msa0258340:intron 40.0%
TTCCAACTAACCGGCATTAT+CGG + chr2_2:54615395-54615414 Msa0258340:CDS 40.0%
!!! TCTTGTCACGGTTTTGTTGT+TGG + chr2_2:54615418-54615437 Msa0258340:CDS 40.0%
GCAGCTCCTTCATTATATGT+CGG - chr2_2:54615551-54615570 None:intergenic 40.0%
ACATATAATGAAGGAGCTGC+AGG + chr2_2:54615551-54615570 Msa0258340:CDS 40.0%
CATATAATGAAGGAGCTGCA+GGG + chr2_2:54615552-54615571 Msa0258340:CDS 40.0%
ATATAATGAAGGAGCTGCAG+GGG + chr2_2:54615553-54615572 Msa0258340:CDS 40.0%
CAAACTTTCCTTGGATACAC+TGG + chr2_2:54615600-54615619 Msa0258340:CDS 40.0%
TGCTTCATTGTTTGCTCTTG+TGG + chr2_2:54615695-54615714 Msa0258340:intron 40.0%
! TTGTTTGCTCTTGTGGATTG+AGG + chr2_2:54615702-54615721 Msa0258340:intron 40.0%
!! ACAGCGTTGGTAAAAACAAC+AGG + chr2_2:54615800-54615819 Msa0258340:intron 40.0%
!! CAGCGTTGGTAAAAACAACA+GGG + chr2_2:54615801-54615820 Msa0258340:intron 40.0%
!! AGCGTTGGTAAAAACAACAG+GGG + chr2_2:54615802-54615821 Msa0258340:intron 40.0%
CTCAAGAGGGACTTGTATTT+AGG + chr2_2:54616078-54616097 Msa0258340:intron 40.0%
! GTTTTGTCTGTTTACTGAGC+AGG + chr2_2:54616413-54616432 Msa0258340:intron 40.0%
AGTAACCAACTAAACGTGAG+AGG + chr2_2:54616555-54616574 Msa0258340:intron 40.0%
!! CTAAACGTGAGAGGTTTTAG+AGG + chr2_2:54616564-54616583 Msa0258340:intron 40.0%
AGAAACCAACTATATGTGGG+AGG + chr2_2:54616726-54616745 Msa0258340:CDS 40.0%
!! CTATATGTGGGAGGTTTTAG+AGG + chr2_2:54616735-54616754 Msa0258340:CDS 40.0%
TTTGGAAGAACCACTAAGGT+GGG - chr2_2:54616817-54616836 None:intergenic 40.0%
TGGACTACTTATGCCAATGT+TGG + chr2_2:54616892-54616911 Msa0258340:CDS 40.0%
GCACAGAAATTGACCAACAT+TGG - chr2_2:54616908-54616927 None:intergenic 40.0%
! AAGATTTTTGACCCCCTTTG+TGG + chr2_2:54617033-54617052 Msa0258340:intron 40.0%
! AGATTTTTGACCCCCTTTGT+GGG + chr2_2:54617034-54617053 Msa0258340:intron 40.0%
! GGTTATGGTTTTCCTCTTGT+TGG + chr2_2:54617214-54617233 Msa0258340:CDS 40.0%
AGTAACTCGGAAGGATATTG+TGG - chr2_2:54617447-54617466 None:intergenic 40.0%
CATGTAATTGCCAAACCCAA+AGG - chr2_2:54617556-54617575 None:intergenic 40.0%
! CTTTGGGTTTGGCAATTACA+TGG + chr2_2:54617554-54617573 Msa0258340:CDS 40.0%
GTCACAACCTTTGTAGTTGT+AGG - chr2_2:54617611-54617630 None:intergenic 40.0%
! TCAGAAACCATATTTGAGGC+AGG - chr2_2:54617643-54617662 None:intergenic 40.0%
GTGCTCAGAAACCATATTTG+AGG - chr2_2:54617647-54617666 None:intergenic 40.0%
! ACTGCAGAAAGCACATTTCA+AGG + chr2_2:54617665-54617684 Msa0258340:CDS 40.0%
ATGCAATCAAATCATCCCCA+TGG + chr2_2:54617716-54617735 Msa0258340:CDS 40.0%
TTTCCCTATCCATTGCAATG+GGG + chr2_2:54617745-54617764 Msa0258340:CDS 40.0%
TCCTGTATTCCACTGGAAAA+TGG + chr2_2:54617771-54617790 Msa0258340:CDS 40.0%
CTTAATCTCATCCGTGGATT+CGG + chr2_2:54617816-54617835 Msa0258340:CDS 40.0%
AGACTAAAGAGACTGGTAGT+TGG + chr2_2:54618179-54618198 Msa0258340:intron 40.0%
! AATCGATGACATGCACTGAT+TGG - chr2_2:54618325-54618344 None:intergenic 40.0%
!! GGAAGGTCTTTCTAGTGTTT+TGG + chr2_2:54618658-54618677 Msa0258340:CDS 40.0%
! TCTGATAGTGTTATCTCTCG+TGG + chr2_2:54618790-54618809 Msa0258340:CDS 40.0%
! CTGATAGTGTTATCTCTCGT+GGG + chr2_2:54618791-54618810 Msa0258340:CDS 40.0%
AACGGTTATTCATCACAGGA+TGG - chr2_2:54618864-54618883 None:intergenic 40.0%
TGCTAACGGTTATTCATCAC+AGG - chr2_2:54618868-54618887 None:intergenic 40.0%
CCACTAGGATAATGTGCTAA+CGG - chr2_2:54618882-54618901 None:intergenic 40.0%
CGTTAGCACATTATCCTAGT+GGG + chr2_2:54618880-54618899 Msa0258340:intron 40.0%
TAGACTAACAAAGGCTGTTC+AGG - chr2_2:54618914-54618933 None:intergenic 40.0%
CTCAAAAGTTGTATTGGAGG+GGG - chr2_2:54619507-54619526 None:intergenic 40.0%
!!! CTTTTGAGTTCCCACATATG+AGG + chr2_2:54619519-54619538 Msa0258340:intron 40.0%
! AATAGAGGACTTTGAGAGGA+GGG - chr2_2:54619583-54619602 None:intergenic 40.0%
! AAATAGAGGACTTTGAGAGG+AGG - chr2_2:54619584-54619603 None:intergenic 40.0%
!! GCTTTGTTTGTGAGTTTGGA+AGG - chr2_2:54619647-54619666 None:intergenic 40.0%
!! TACGGCTTTGTTTGTGAGTT+TGG - chr2_2:54619651-54619670 None:intergenic 40.0%
AAACTCACAAACAAAGCCGT+AGG + chr2_2:54619650-54619669 Msa0258340:intron 40.0%
AACTCACAAACAAAGCCGTA+GGG + chr2_2:54619651-54619670 Msa0258340:intron 40.0%
!!! AGCTGGTTTTTGGTGAGTTT+TGG + chr2_2:54619684-54619703 Msa0258340:intron 40.0%
!!! GTTTTGGGAGGATATTTGAG+TGG + chr2_2:54619957-54619976 Msa0258340:intron 40.0%
TTTGGGAGGATATTTGAGTG+GGG + chr2_2:54619959-54619978 Msa0258340:intron 40.0%
! GGGGAATGCTCAATTTTTCT+AGG + chr2_2:54619978-54619997 Msa0258340:intron 40.0%
AAGGAATGTGATAGGGACTT+GGG - chr2_2:54620007-54620026 None:intergenic 40.0%
AAAGGAATGTGATAGGGACT+TGG - chr2_2:54620008-54620027 None:intergenic 40.0%
!!! GTTTTGACTCGTGATTCCTT+TGG + chr2_2:54620193-54620212 Msa0258340:intron 40.0%
!! AGACAGAAGTTTTGACCTTG+GGG - chr2_2:54620310-54620329 None:intergenic 40.0%
!! CAAGACAGAAGTTTTGACCT+TGG - chr2_2:54620312-54620331 None:intergenic 40.0%
ATCATAGGTAGGTAGCTGAA+TGG - chr2_2:54620444-54620463 None:intergenic 40.0%
! AAAGTACTACTAGGATGGGA+GGG - chr2_2:54620655-54620674 None:intergenic 40.0%
!! AAAAGTACTACTAGGATGGG+AGG - chr2_2:54620656-54620675 None:intergenic 40.0%
ATATTAACAGGGAAGGTTGG+AGG + chr2_2:54621037-54621056 Msa0258340:intron 40.0%
TATTAACAGGGAAGGTTGGA+GGG + chr2_2:54621038-54621057 Msa0258340:intron 40.0%
! TTGTTGAAAGTATGCGGGTA+TGG - chr2_2:54621218-54621237 None:intergenic 40.0%
CCCGCATACTTTCAACAATA+TGG + chr2_2:54621220-54621239 Msa0258340:CDS 40.0%
!! ATAACTTGGCACTGACAAGT+TGG - chr2_2:54621260-54621279 None:intergenic 40.0%
!! CCTCCATATTTGCTTTGGAA+AGG - chr2_2:54621313-54621332 None:intergenic 40.0%
CCTTTCCAAAGCAAATATGG+AGG + chr2_2:54621310-54621329 Msa0258340:CDS 40.0%
ATACCCCTCCATATTTGCTT+TGG - chr2_2:54621318-54621337 None:intergenic 40.0%
AGTAAAGGAACATGACACAG+AGG - chr2_2:54621342-54621361 None:intergenic 40.0%
! GGTCTTATATATAACGCGGA+CGG - chr2_2:54621427-54621446 None:intergenic 40.0%
!! AGCATCCTGCATGTTATTTC+AGG + chr2_2:54621888-54621907 Msa0258340:intron 40.0%
!! GCATCCTGCATGTTATTTCA+GGG + chr2_2:54621889-54621908 Msa0258340:intron 40.0%
GCAGCGAAAATATCGTGTTT+AGG - chr2_2:54622215-54622234 None:intergenic 40.0%
! TTTTCTTGTCGCCGTTATCT+TGG + chr2_2:54622248-54622267 Msa0258340:CDS 40.0%
CTGCTATTGCCAAAGACTAT+GGG + chr2_2:54622346-54622365 Msa0258340:CDS 40.0%
AAAATCCGACCAACTCTCAT+TGG - chr2_2:54622375-54622394 None:intergenic 40.0%
! AGTTGGTCGGATTTTCAGAT+GGG + chr2_2:54622380-54622399 Msa0258340:CDS 40.0%
! GATTTTCAGATGGGTGAAGT+GGG + chr2_2:54622389-54622408 Msa0258340:CDS 40.0%
CCATTCAACAAAACGAGATC+TGG - chr2_2:54622498-54622517 None:intergenic 40.0%
!! CCAGATCTCGTTTTGTTGAA+TGG + chr2_2:54622495-54622514 Msa0258340:three_prime_UTR 40.0%
!! ATCTCGTTTTGTTGAATGGG+TGG + chr2_2:54622499-54622518 Msa0258340:three_prime_UTR 40.0%
TGTTGAATGGGTGGTATGAT+TGG + chr2_2:54622508-54622527 Msa0258340:three_prime_UTR 40.0%
TGTACATCAAAGTTCCAGAG+CGG + chr2_2:54622559-54622578 Msa0258340:three_prime_UTR 40.0%
ATAACACAAATAGACCGCTC+TGG - chr2_2:54622576-54622595 None:intergenic 40.0%
CATTCATAATCTCCAGTTGG+AGG + chr2_2:54622631-54622650 Msa0258340:three_prime_UTR 40.0%
!! GCGGGTTTTGACAAATATCT+TGG + chr2_2:54622678-54622697 Msa0258340:three_prime_UTR 40.0%
AAGAGAGAGAGAGAAAGCTC+CGG - chr2_2:54613667-54613686 None:intergenic 45.0%
TCTGGTGAGTGTAGAAGTGA+AGG - chr2_2:54613707-54613726 None:intergenic 45.0%
GCATGATAGCTTCAACGGAA+CGG - chr2_2:54613743-54613762 None:intergenic 45.0%
CATTGGTGGAATGAAGCTAG+TGG - chr2_2:54613767-54613786 None:intergenic 45.0%
AACCAGTTCCACCTTCTTCA+TGG + chr2_2:54613851-54613870 Msa0258340:CDS 45.0%
ACCAGTTCCACCTTCTTCAT+GGG + chr2_2:54613852-54613871 Msa0258340:CDS 45.0%
TTCTTAGCCCATGAAGAAGG+TGG - chr2_2:54613862-54613881 None:intergenic 45.0%
!! ATTTTCTCGCCGTTTGCTAC+CGG - chr2_2:54614024-54614043 None:intergenic 45.0%
ATTGGTACTCGGAACTCCAT+CGG - chr2_2:54614091-54614110 None:intergenic 45.0%
TTCACCTGACCATTGGTACT+CGG - chr2_2:54614102-54614121 None:intergenic 45.0%
GATGTGTTAGTGGCTATAGG+AGG + chr2_2:54614705-54614724 Msa0258340:intron 45.0%
ATAGGAGGAAATTGCTGCAG+TGG + chr2_2:54614720-54614739 Msa0258340:intron 45.0%
ATCAACTCACCCGAGTTTCA+AGG + chr2_2:54614859-54614878 Msa0258340:CDS 45.0%
CCGGAGTTTCAAGGATTAAG+TGG + chr2_2:54615054-54615073 Msa0258340:intron 45.0%
!! GACTGAAAATGCCGGTTTGT+TGG - chr2_2:54615143-54615162 None:intergenic 45.0%
TATAATGAAGGAGCTGCAGG+GGG + chr2_2:54615554-54615573 Msa0258340:CDS 45.0%
CTGCAGGGGGCTATAATTAT+TGG + chr2_2:54615567-54615586 Msa0258340:CDS 45.0%
GTTGGGAAGAAAAACAGCGT+TGG + chr2_2:54615787-54615806 Msa0258340:intron 45.0%
!! GAAGCTGAGAGCATTCTTAC+AGG + chr2_2:54616244-54616263 Msa0258340:intron 45.0%
TGAGAAGGAGGATGGTGTTT+AGG + chr2_2:54616596-54616615 Msa0258340:intron 45.0%
TATATCACTCAAGCCTCCCA+GGG - chr2_2:54616625-54616644 None:intergenic 45.0%
ATATATCACTCAAGCCTCCC+AGG - chr2_2:54616626-54616645 None:intergenic 45.0%
! TGAGAAGGAGGATGGTGTTA+AGG + chr2_2:54616768-54616787 Msa0258340:CDS 45.0%
! AAGAACCACTAAGGTGGGTT+TGG - chr2_2:54616812-54616831 None:intergenic 45.0%
GTTTGGAAGAACCACTAAGG+TGG - chr2_2:54616818-54616837 None:intergenic 45.0%
ACAAAAAGCTACTGTGGCTC+TGG - chr2_2:54616967-54616986 None:intergenic 45.0%
TCTTGAGACACATGCCATAG+CGG - chr2_2:54617017-54617036 None:intergenic 45.0%
! ACCAAGCCTTATCCCACAAA+GGG - chr2_2:54617049-54617068 None:intergenic 45.0%
! AACCAAGCCTTATCCCACAA+AGG - chr2_2:54617050-54617069 None:intergenic 45.0%
TGAAAGTCCAACTGCAGCAA+TGG - chr2_2:54617188-54617207 None:intergenic 45.0%
TCGATACATGTGCCAACAAG+AGG - chr2_2:54617229-54617248 None:intergenic 45.0%
GTTGGCACATGTATCGAGAT+TGG + chr2_2:54617232-54617251 Msa0258340:CDS 45.0%
TTCACTGCAGTGGAGTAACT+CGG - chr2_2:54617460-54617479 None:intergenic 45.0%
! ACCTGATTTGCAGGTTCCTT+TGG + chr2_2:54617537-54617556 Msa0258340:intron 45.0%
! CCTGATTTGCAGGTTCCTTT+GGG + chr2_2:54617538-54617557 Msa0258340:intron 45.0%
! TTTGCAGGTTCCTTTGGGTT+TGG + chr2_2:54617543-54617562 Msa0258340:intron 45.0%
GTACCCCATTGCAATGGATA+GGG - chr2_2:54617751-54617770 None:intergenic 45.0%
AGTACCCCATTGCAATGGAT+AGG - chr2_2:54617752-54617771 None:intergenic 45.0%
!! GCCATTTTCCAGTGGAATAC+AGG - chr2_2:54617775-54617794 None:intergenic 45.0%
!! TCACAAGAGCCATTTTCCAG+TGG - chr2_2:54617783-54617802 None:intergenic 45.0%
GGTTTCCTTAATCTCATCCG+TGG + chr2_2:54617810-54617829 Msa0258340:CDS 45.0%
CGAATCCACGGATGAGATTA+AGG - chr2_2:54617818-54617837 None:intergenic 45.0%
CAGGAATCTAACCGAATCCA+CGG - chr2_2:54617830-54617849 None:intergenic 45.0%
!!! GGTCTTTCTAGTGTTTTGGC+TGG + chr2_2:54618662-54618681 Msa0258340:CDS 45.0%
!!! TAGTGTTTTGGCTGGTCTCT+GGG + chr2_2:54618670-54618689 Msa0258340:CDS 45.0%
!! ATCACAGGATGGACTACCAA+AGG - chr2_2:54618853-54618872 None:intergenic 45.0%
CCGTTAGCACATTATCCTAG+TGG + chr2_2:54618879-54618898 Msa0258340:intron 45.0%
TTCAGGAACACTTACCCACT+AGG - chr2_2:54618897-54618916 None:intergenic 45.0%
! TATTGGAGGGGGATTTTGGA+GGG - chr2_2:54619496-54619515 None:intergenic 45.0%
! GTTGTATTGGAGGGGGATTT+TGG - chr2_2:54619500-54619519 None:intergenic 45.0%
GGAGCAAGTGGAAGAAATAG+AGG - chr2_2:54619598-54619617 None:intergenic 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - chr2_2:54619610-54619629 None:intergenic 45.0%
!! GAGGGCTTTGGAAAAAAGGA+AGG - chr2_2:54619619-54619638 None:intergenic 45.0%
TTTGTGAGTTTGGAAGGGAG+GGG - chr2_2:54619641-54619660 None:intergenic 45.0%
GTTTGTGAGTTTGGAAGGGA+GGG - chr2_2:54619642-54619661 None:intergenic 45.0%
TGTTTGTGAGTTTGGAAGGG+AGG - chr2_2:54619643-54619662 None:intergenic 45.0%
!!! TGTGCTTGTGAGCTGGTTTT+TGG + chr2_2:54619674-54619693 Msa0258340:intron 45.0%
!!! GTGAGTTTTGGAGTGTAGCA+GGG + chr2_2:54619696-54619715 Msa0258340:intron 45.0%
! TCTGTACTCGTAGCAGGTTT+TGG + chr2_2:54619941-54619960 Msa0258340:intron 45.0%
! CTGTACTCGTAGCAGGTTTT+GGG + chr2_2:54619942-54619961 Msa0258340:intron 45.0%
GATTGCATTAACTTCCCCCA+AGG + chr2_2:54620292-54620311 Msa0258340:intron 45.0%
!! GACAGAAGTTTTGACCTTGG+GGG - chr2_2:54620309-54620328 None:intergenic 45.0%
TAGATTCAAAGGCCTCACAC+AGG + chr2_2:54620362-54620381 Msa0258340:intron 45.0%
! AGAAGCTCAAGGGTGTATCA+AGG - chr2_2:54620572-54620591 None:intergenic 45.0%
GGGTTCATTGCTTCAATTCC+TGG + chr2_2:54621058-54621077 Msa0258340:CDS 45.0%
TGCTTCAATTCCTGGAGTCA+TGG + chr2_2:54621066-54621085 Msa0258340:CDS 45.0%
TGGTCTCCTCTGCTTTATGT+GGG + chr2_2:54621093-54621112 Msa0258340:CDS 45.0%
TGGGCAATGCTTACAGCATT+GGG + chr2_2:54621112-54621131 Msa0258340:CDS 45.0%
GTCCAATCTACGCTATAGTG+AGG + chr2_2:54621138-54621157 Msa0258340:CDS 45.0%
AGCCTCACTATAGCGTAGAT+TGG - chr2_2:54621143-54621162 None:intergenic 45.0%
AATCTACGCTATAGTGAGGC+TGG + chr2_2:54621142-54621161 Msa0258340:CDS 45.0%
!! GGCACTGACAAGTTGGAATT+TGG - chr2_2:54621253-54621272 None:intergenic 45.0%
CCTTACATTGTGGCTTCTCA+CGG + chr2_2:54621286-54621305 Msa0258340:CDS 45.0%
CTTACATTGTGGCTTCTCAC+GGG + chr2_2:54621287-54621306 Msa0258340:CDS 45.0%
GGGCCTTTCCAAAGCAAATA+TGG + chr2_2:54621307-54621326 Msa0258340:CDS 45.0%
CTTATATATAACGCGGACGG+AGG - chr2_2:54621424-54621443 None:intergenic 45.0%
GCAACCCTGAAATAACATGC+AGG - chr2_2:54621896-54621915 None:intergenic 45.0%
! CACGATATTTTCGCTGCACA+TGG + chr2_2:54622218-54622237 Msa0258340:CDS 45.0%
AAGAACGCGGAGTATACGTT+TGG + chr2_2:54622295-54622314 Msa0258340:CDS 45.0%
CCATAGTCTTTGGCAATAGC+AGG - chr2_2:54622348-54622367 None:intergenic 45.0%
CCTGCTATTGCCAAAGACTA+TGG + chr2_2:54622345-54622364 Msa0258340:CDS 45.0%
CATTGGCAACCCATAGTCTT+TGG - chr2_2:54622358-54622377 None:intergenic 45.0%
! TATGGGTTGCCAATGAGAGT+TGG + chr2_2:54622363-54622382 Msa0258340:CDS 45.0%
!! GAGTTGGTCGGATTTTCAGA+TGG + chr2_2:54622379-54622398 Msa0258340:CDS 45.0%
! GGATTTTCAGATGGGTGAAG+TGG + chr2_2:54622388-54622407 Msa0258340:CDS 45.0%
TGAATGTCGTCAACTGTCCA+AGG + chr2_2:54622460-54622479 Msa0258340:three_prime_UTR 45.0%
AAACGAGATCTGGACTGATG+TGG - chr2_2:54622488-54622507 None:intergenic 45.0%
GAATGGGTGGTATGATTGGT+TGG + chr2_2:54622512-54622531 Msa0258340:three_prime_UTR 45.0%
AAAACTTTCCGGTCCCTGTT+TGG - chr2_2:54622737-54622756 None:intergenic 45.0%
!! AAAAATAAAACAATATTATT+TGG - chr2_2:54618267-54618286 None:intergenic 5.0%
!!! TAGTTTTTATTTATTTATTT+TGG + chr2_2:54620614-54620633 Msa0258340:intron 5.0%
!!! TTTTTTATTATTTTTTTGTA+AGG + chr2_2:54622656-54622675 Msa0258340:three_prime_UTR 5.0%
GTGGCGCATGATAGCTTCAA+CGG - chr2_2:54613748-54613767 None:intergenic 50.0%
GTGACCATTGTACCGAACGT+TGG - chr2_2:54613807-54613826 None:intergenic 50.0%
ACGTTCGGTACAATGGTCAC+CGG + chr2_2:54613807-54613826 Msa0258340:CDS 50.0%
! GGGCTAAGAAAACCGGTTTC+CGG + chr2_2:54613872-54613891 Msa0258340:CDS 50.0%
!! GGAGAATTTTGGCCGGAAAC+CGG - chr2_2:54613887-54613906 None:intergenic 50.0%
GGTTTCCGGCCAAAATTCTC+CGG + chr2_2:54613886-54613905 Msa0258340:CDS 50.0%
! TTGGTCTCGCCGGAGAATTT+TGG - chr2_2:54613898-54613917 None:intergenic 50.0%
GGTTATCTGACCGGAATCAC+CGG - chr2_2:54613923-54613942 None:intergenic 50.0%
TCTAGACTTAACCGGCGGTA+AGG - chr2_2:54613944-54613963 None:intergenic 50.0%
GCTTCTCTAGACTTAACCGG+CGG - chr2_2:54613949-54613968 None:intergenic 50.0%
AACACGACCTGCTTCGAGAT+CGG - chr2_2:54613983-54614002 None:intergenic 50.0%
TCTCGAAGCAGGTCGTGTTA+AGG + chr2_2:54613984-54614003 Msa0258340:CDS 50.0%
TCTCTCCGTTTCTTCACTGC+AGG - chr2_2:54614066-54614085 None:intergenic 50.0%
AAGAAACGGAGAGACTCCGA+TGG + chr2_2:54614072-54614091 Msa0258340:CDS 50.0%
GATGGAGTTCCGAGTACCAA+TGG + chr2_2:54614090-54614109 Msa0258340:CDS 50.0%
AGTTCCGAGTACCAATGGTC+AGG + chr2_2:54614095-54614114 Msa0258340:CDS 50.0%
GAGTACCAATGGTCAGGTGA+AGG + chr2_2:54614101-54614120 Msa0258340:CDS 50.0%
CTCAACCTTCACCTGACCAT+TGG - chr2_2:54614109-54614128 None:intergenic 50.0%
GCGAGGAATGAAGAAGTTGC+TGG + chr2_2:54614147-54614166 Msa0258340:CDS 50.0%
! GCACTGACACTTCTGATCGA+AGG + chr2_2:54614288-54614307 Msa0258340:intron 50.0%
GTCATTGTTCCTGCTATGGG+AGG + chr2_2:54614571-54614590 Msa0258340:CDS 50.0%
ACATGAGATCCTCCCATAGC+AGG - chr2_2:54614583-54614602 None:intergenic 50.0%
TCCAGGTTGCCCTTGATACA+AGG + chr2_2:54614799-54614818 Msa0258340:CDS 50.0%
CCAGGTTGCCCTTGATACAA+GGG + chr2_2:54614800-54614819 Msa0258340:CDS 50.0%
! GACCGATAATGCCGGTTAGT+TGG - chr2_2:54615400-54615419 None:intergenic 50.0%
CGTGACAAGACCGATAATGC+CGG - chr2_2:54615408-54615427 None:intergenic 50.0%
! CGGCATTATCGGTCTTGTCA+CGG + chr2_2:54615406-54615425 Msa0258340:CDS 50.0%
GTCTCGCGATTTAGTCAACC+AGG - chr2_2:54615860-54615879 None:intergenic 50.0%
!! GCAGCAGAACTAGCTCTGTA+CGG - chr2_2:54616376-54616395 None:intergenic 50.0%
!! CAGAGCTAGTTCTGCTGCTA+AGG + chr2_2:54616378-54616397 Msa0258340:intron 50.0%
!!! ACGTGAGAGGTTTTAGAGGG+TGG + chr2_2:54616568-54616587 Msa0258340:intron 50.0%
! GATGGTGTTTAGGTTCCCCT+GGG + chr2_2:54616606-54616625 Msa0258340:intron 50.0%
ATATCACTCAAGCCTCCCAG+GGG - chr2_2:54616624-54616643 None:intergenic 50.0%
!!! ATGTGGGAGGTTTTAGAGGG+TGG + chr2_2:54616739-54616758 Msa0258340:CDS 50.0%
TTTGAACGCGGTCTGGATAC+TGG - chr2_2:54616872-54616891 None:intergenic 50.0%
GTATCCAGACCGCGTTCAAA+TGG + chr2_2:54616872-54616891 Msa0258340:CDS 50.0%
TAGTCCATTTGAACGCGGTC+TGG - chr2_2:54616879-54616898 None:intergenic 50.0%
CTTGAGACACATGCCATAGC+GGG - chr2_2:54617016-54617035 None:intergenic 50.0%
TTGACCCCCTTTGTGGGATA+AGG + chr2_2:54617040-54617059 Msa0258340:intron 50.0%
! CAAGCCTTATCCCACAAAGG+GGG - chr2_2:54617047-54617066 None:intergenic 50.0%
! CCAAGCCTTATCCCACAAAG+GGG - chr2_2:54617048-54617067 None:intergenic 50.0%
TCCAACTGCAGCAATGGTTG+GGG - chr2_2:54617182-54617201 None:intergenic 50.0%
GTCCAACTGCAGCAATGGTT+GGG - chr2_2:54617183-54617202 None:intergenic 50.0%
AGTCCAACTGCAGCAATGGT+TGG - chr2_2:54617184-54617203 None:intergenic 50.0%
CAATAGACACAGTGGGAGTC+TGG - chr2_2:54617310-54617329 None:intergenic 50.0%
CCCAAAGGAACCTGCAAATC+AGG - chr2_2:54617541-54617560 None:intergenic 50.0%
GTAGTTGTAGGCTCCAGCTT+CGG - chr2_2:54617599-54617618 None:intergenic 50.0%
GCTGGAGCCTACAACTACAA+AGG + chr2_2:54617601-54617620 Msa0258340:CDS 50.0%
!! ACAGGAGTACCCCATTGCAA+TGG - chr2_2:54617757-54617776 None:intergenic 50.0%
AATGGCTCTTGTGATGTGCG+TGG + chr2_2:54617789-54617808 Msa0258340:CDS 50.0%
CATCTAGACCTCCAACTCCT+GGG + chr2_2:54618612-54618631 Msa0258340:CDS 50.0%
ATCTAGACCTCCAACTCCTG+GGG + chr2_2:54618613-54618632 Msa0258340:CDS 50.0%
TCTTAGTCGCGGAATTGGTC+TGG + chr2_2:54618637-54618656 Msa0258340:CDS 50.0%
!!! CTAGTGTTTTGGCTGGTCTC+TGG + chr2_2:54618669-54618688 Msa0258340:CDS 50.0%
!!! AGTGTTTTGGCTGGTCTCTG+GGG + chr2_2:54618671-54618690 Msa0258340:CDS 50.0%
AAGCCGCAGAGCAGTTCAAT+TGG + chr2_2:54618757-54618776 Msa0258340:CDS 50.0%
AGCCGCAGAGCAGTTCAATT+GGG + chr2_2:54618758-54618777 Msa0258340:CDS 50.0%
CACCCAATTGAACTGCTCTG+CGG - chr2_2:54618763-54618782 None:intergenic 50.0%
! GTTTGCTGCCTCGCTTGTTA+TGG - chr2_2:54619088-54619107 None:intergenic 50.0%
! GTATTGGAGGGGGATTTTGG+AGG - chr2_2:54619497-54619516 None:intergenic 50.0%
! ACTTTGAGAGGAGGGCTTTG+GGG - chr2_2:54619575-54619594 None:intergenic 50.0%
! GACTTTGAGAGGAGGGCTTT+GGG - chr2_2:54619576-54619595 None:intergenic 50.0%
!! AGGGGAGGGCTTTGGAAAAA+AGG - chr2_2:54619623-54619642 None:intergenic 50.0%
!!! GGTGAGTTTTGGAGTGTAGC+AGG + chr2_2:54619695-54619714 Msa0258340:intron 50.0%
GTAGCAGGGCTCATGTATCA+TGG + chr2_2:54619710-54619729 Msa0258340:intron 50.0%
CTGCAATCTGTACTCGTAGC+AGG + chr2_2:54619935-54619954 Msa0258340:intron 50.0%
!!! TACTCGTAGCAGGTTTTGGG+AGG + chr2_2:54619945-54619964 Msa0258340:intron 50.0%
ATTCCTGGAGTCATGGTTGC+TGG + chr2_2:54621073-54621092 Msa0258340:CDS 50.0%
CTGGTCTCCTCTGCTTTATG+TGG + chr2_2:54621092-54621111 Msa0258340:CDS 50.0%
GCATTGCCCACATAAAGCAG+AGG - chr2_2:54621102-54621121 None:intergenic 50.0%
GTGGGCAATGCTTACAGCAT+TGG + chr2_2:54621111-54621130 Msa0258340:CDS 50.0%
CCGTGAGAAGCCACAATGTA+AGG - chr2_2:54621289-54621308 None:intergenic 50.0%
ACGCGGAGTATACGTTTGGT+CGG + chr2_2:54622299-54622318 Msa0258340:CDS 50.0%
GGCTCTCTTCTAGCAACATC+AGG - chr2_2:54622327-54622346 None:intergenic 50.0%
! GGTTGCCAATGAGAGTTGGT+CGG + chr2_2:54622367-54622386 Msa0258340:CDS 50.0%
TTCAGATGGGTGAAGTGGGT+TGG + chr2_2:54622393-54622412 Msa0258340:CDS 50.0%
ACGAGACTCCTGTCATTCAC+AGG - chr2_2:54622419-54622438 None:intergenic 50.0%
GTGAATGACAGGAGTCTCGT+TGG + chr2_2:54622419-54622438 Msa0258340:exon 50.0%
TCTGGACTGATGTGGTACCT+TGG - chr2_2:54622480-54622499 None:intergenic 50.0%
TATACCTGCCAAACAGGGAC+CGG + chr2_2:54622726-54622745 Msa0258340:three_prime_UTR 50.0%
TACCGAACGTTGGCGAGGTT+CGG - chr2_2:54613797-54613816 None:intergenic 55.0%
CATTGTACCGAACGTTGGCG+AGG - chr2_2:54613802-54613821 None:intergenic 55.0%
CTCGCCAACGTTCGGTACAA+TGG + chr2_2:54613800-54613819 Msa0258340:CDS 55.0%
GCTTCTGGCGTAGATAACGC+CGG - chr2_2:54613829-54613848 None:intergenic 55.0%
! GGTGGAACTGGTTTCGCTTC+TGG - chr2_2:54613844-54613863 None:intergenic 55.0%
GCCCATGAAGAAGGTGGAAC+TGG - chr2_2:54613856-54613875 None:intergenic 55.0%
!! TCTCGCCGGAGAATTTTGGC+CGG - chr2_2:54613894-54613913 None:intergenic 55.0%
GAGACCAATGCCGGTGATTC+CGG + chr2_2:54613910-54613929 Msa0258340:CDS 55.0%
CGGCGGTAAGGTTATCTGAC+CGG - chr2_2:54613932-54613951 None:intergenic 55.0%
CGGTCAGATAACCTTACCGC+CGG + chr2_2:54613930-54613949 Msa0258340:CDS 55.0%
ACCTGCTTCGAGATCGGGAT+TGG - chr2_2:54613977-54613996 None:intergenic 55.0%
ACACGACCTGCTTCGAGATC+GGG - chr2_2:54613982-54614001 None:intergenic 55.0%
CACCGCCTGCAGTGAAGAAA+CGG + chr2_2:54614058-54614077 Msa0258340:CDS 55.0%
CTCCGTTTCTTCACTGCAGG+CGG - chr2_2:54614063-54614082 None:intergenic 55.0%
TCAGGTGAAGGTTGAGCAGC+CGG + chr2_2:54614113-54614132 Msa0258340:CDS 55.0%
CCATCCTCATCCACAGTCTG+CGG - chr2_2:54614180-54614199 None:intergenic 55.0%
CGCAGACTGTGGATGAGGAT+GGG + chr2_2:54614178-54614197 Msa0258340:CDS 55.0%
TCAACTGCGCTCTTCGTGTC+TGG + chr2_2:54614745-54614764 Msa0258340:CDS 55.0%
CCCTTGTATCAAGGGCAACC+TGG - chr2_2:54614803-54614822 None:intergenic 55.0%
CCTTGAAACTCCGGGGAACA+AGG - chr2_2:54615048-54615067 None:intergenic 55.0%
CCTTGTTCCCCGGAGTTTCA+AGG + chr2_2:54615045-54615064 Msa0258340:intron 55.0%
! CGGTCTTGTAACGGTTTCGC+TGG + chr2_2:54615283-54615302 Msa0258340:intron 55.0%
TAGAGGGTGGTGCAGTGAGA+AGG + chr2_2:54616581-54616600 Msa0258340:intron 55.0%
TGGTGCAGTGAGAAGGAGGA+TGG + chr2_2:54616588-54616607 Msa0258340:intron 55.0%
! GGATGGTGTTTAGGTTCCCC+TGG + chr2_2:54616605-54616624 Msa0258340:intron 55.0%
AGAGGGTGGTAGCAGTGAGA+AGG + chr2_2:54616753-54616772 Msa0258340:CDS 55.0%
GGTAGCAGTGAGAAGGAGGA+TGG + chr2_2:54616760-54616779 Msa0258340:CDS 55.0%
! CCACTAAGGTGGGTTTGGAG+CGG - chr2_2:54616807-54616826 None:intergenic 55.0%
ATACTGGATGCAGGGGATGC+AGG - chr2_2:54616856-54616875 None:intergenic 55.0%
GGTCTGGATACTGGATGCAG+GGG - chr2_2:54616863-54616882 None:intergenic 55.0%
CGGTCTGGATACTGGATGCA+GGG - chr2_2:54616864-54616883 None:intergenic 55.0%
CCCCTTTGTGGGATAAGGCT+TGG + chr2_2:54617045-54617064 Msa0258340:intron 55.0%
ATGGTTGGGGATACAGCCAC+AGG - chr2_2:54617169-54617188 None:intergenic 55.0%
TCCCCAACCATTGCTGCAGT+TGG + chr2_2:54617178-54617197 Msa0258340:CDS 55.0%
CTGCAGTGGAGTAACTCGGA+AGG - chr2_2:54617456-54617475 None:intergenic 55.0%
GCTTTCTTGCTGACCGAAGC+TGG + chr2_2:54617583-54617602 Msa0258340:CDS 55.0%
! GGGGTACTCCTGTATTCCAC+TGG + chr2_2:54617764-54617783 Msa0258340:CDS 55.0%
GCATCTAGACCTCCAACTCC+TGG + chr2_2:54618611-54618630 Msa0258340:CDS 55.0%
CTAAGAACCCCAGGAGTTGG+AGG - chr2_2:54618623-54618642 None:intergenic 55.0%
CGACTAAGAACCCCAGGAGT+TGG - chr2_2:54618626-54618645 None:intergenic 55.0%
ACTCCTGGGGTTCTTAGTCG+CGG + chr2_2:54618626-54618645 Msa0258340:CDS 55.0%
ATTCCGCGACTAAGAACCCC+AGG - chr2_2:54618632-54618651 None:intergenic 55.0%
GGGGTTCTTAGTCGCGGAAT+TGG + chr2_2:54618632-54618651 Msa0258340:CDS 55.0%
! AGTCGCGGAATTGGTCTGGA+AGG + chr2_2:54618641-54618660 Msa0258340:CDS 55.0%
!! TTTGAGAGGAGGGCTTTGGG+GGG - chr2_2:54619573-54619592 None:intergenic 55.0%
! CTTTGAGAGGAGGGCTTTGG+GGG - chr2_2:54619574-54619593 None:intergenic 55.0%
! GGACTTTGAGAGGAGGGCTT+TGG - chr2_2:54619577-54619596 None:intergenic 55.0%
TGAGTTTGGAAGGGAGGGGA+GGG - chr2_2:54619637-54619656 None:intergenic 55.0%
CAGCTCACAAGCACACCCTA+CGG - chr2_2:54619669-54619688 None:intergenic 55.0%
ACAGCGGAAAGTCCTGTGTG+AGG - chr2_2:54620377-54620396 None:intergenic 55.0%
CTAGGATGGGAGGGAGGAAA+AGG - chr2_2:54620646-54620665 None:intergenic 55.0%
GTACTACTAGGATGGGAGGG+AGG - chr2_2:54620652-54620671 None:intergenic 55.0%
AGACCAGCAACCATGACTCC+AGG - chr2_2:54621079-54621098 None:intergenic 55.0%
CCTGGCAGTAAGCAAGAACG+CGG + chr2_2:54622282-54622301 Msa0258340:CDS 55.0%
!! TGGGTTGGCCTGTGAATGAC+AGG + chr2_2:54622408-54622427 Msa0258340:exon 55.0%
! GGTTCGGGTTCGGACATTGG+TGG - chr2_2:54613781-54613800 None:intergenic 60.0%
! CGAGGTTCGGGTTCGGACAT+TGG - chr2_2:54613784-54613803 None:intergenic 60.0%
! ACGTTGGCGAGGTTCGGGTT+CGG - chr2_2:54613791-54613810 None:intergenic 60.0%
ACCCGAACCTCGCCAACGTT+CGG + chr2_2:54613792-54613811 Msa0258340:CDS 60.0%
ACCGAACGTTGGCGAGGTTC+GGG - chr2_2:54613796-54613815 None:intergenic 60.0%
TTCTCCGGCGAGACCAATGC+CGG + chr2_2:54613901-54613920 Msa0258340:CDS 60.0%
!! ATCACCGGCATTGGTCTCGC+CGG - chr2_2:54613908-54613927 None:intergenic 60.0%
CTGACCGGAATCACCGGCAT+TGG - chr2_2:54613917-54613936 None:intergenic 60.0%
GCCAATCCCGATCTCGAAGC+AGG + chr2_2:54613973-54613992 Msa0258340:CDS 60.0%
TAAGGCAACTCCTCCTCCGC+CGG + chr2_2:54614002-54614021 Msa0258340:CDS 60.0%
! TTCTCGCCGTTTGCTACCGG+CGG - chr2_2:54614021-54614040 None:intergenic 60.0%
TTCACTGCAGGCGGTGGAAG+CGG - chr2_2:54614054-54614073 None:intergenic 60.0%
CGTTTCTTCACTGCAGGCGG+TGG - chr2_2:54614060-54614079 None:intergenic 60.0%
TGAAGGTTGAGCAGCCGGTG+AGG + chr2_2:54614118-54614137 Msa0258340:CDS 60.0%
TGAGCAGCCGGTGAGGAGAA+CGG + chr2_2:54614125-54614144 Msa0258340:CDS 60.0%
TTCCTCGCCGTTCTCCTCAC+CGG - chr2_2:54614135-54614154 None:intergenic 60.0%
TGGTTCGTTGCCGCAGACTG+TGG + chr2_2:54614167-54614186 Msa0258340:CDS 60.0%
GTTGCCGCAGACTGTGGATG+AGG + chr2_2:54614173-54614192 Msa0258340:CDS 60.0%
CCGCAGACTGTGGATGAGGA+TGG + chr2_2:54614177-54614196 Msa0258340:CDS 60.0%
AGGGTGGTGCAGTGAGAAGG+AGG + chr2_2:54616584-54616603 Msa0258340:intron 60.0%
! GGTGTTTAGGTTCCCCTGGG+AGG + chr2_2:54616609-54616628 Msa0258340:intron 60.0%
GGGTGGTAGCAGTGAGAAGG+AGG + chr2_2:54616756-54616775 Msa0258340:CDS 60.0%
CCGCTCCAAACCCACCTTAG+TGG + chr2_2:54616804-54616823 Msa0258340:CDS 60.0%
GCGGTCTGGATACTGGATGC+AGG - chr2_2:54616865-54616884 None:intergenic 60.0%
!! TTGGCTGGTCTCTGGGGTAC+TGG + chr2_2:54618677-54618696 Msa0258340:CDS 60.0%
!! GGTCTCTGGGGTACTGGAAC+TGG + chr2_2:54618683-54618702 Msa0258340:CDS 60.0%
GTGAGTTTGGAAGGGAGGGG+AGG - chr2_2:54619638-54619657 None:intergenic 60.0%
CGTAGGGTGTGCTTGTGAGC+TGG + chr2_2:54619667-54619686 Msa0258340:intron 60.0%
CCGCGTTCTTGCTTACTGCC+AGG - chr2_2:54622285-54622304 None:intergenic 60.0%
CTTTCCGGTCCCTGTTTGGC+AGG - chr2_2:54622733-54622752 None:intergenic 60.0%
CCTCCTCCGCCGGTAGCAAA+CGG + chr2_2:54614012-54614031 Msa0258340:CDS 65.0%
TGGAAGGGAGGGGAGGGCTT+TGG - chr2_2:54619631-54619650 None:intergenic 65.0%
! CCGTTTGCTACCGGCGGAGG+AGG - chr2_2:54614015-54614034 None:intergenic 70.0%
! TCGCCGTTTGCTACCGGCGG+AGG - chr2_2:54614018-54614037 None:intergenic 70.0%
ACTGCAGGCGGTGGAAGCGG+TGG - chr2_2:54614051-54614070 None:intergenic 70.0%
AGCCGGTGAGGAGAACGGCG+AGG + chr2_2:54614130-54614149 Msa0258340:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 54613602 54622828 54613602 ID=Msa0258340;Name=Msa0258340
chr2_2 mRNA 54613602 54622828 54613602 ID=Msa0258340-mRNA-1;Parent=Msa0258340;Name=Msa0258340-mRNA-1;_AED=0.11;_eAED=0.12;_QI=182|0.63|0.83|0.91|1|1|12|406|783
chr2_2 exon 54613602 54614255 54613602 ID=Msa0258340-mRNA-1:exon:16434;Parent=Msa0258340-mRNA-1
chr2_2 exon 54614503 54614600 54614503 ID=Msa0258340-mRNA-1:exon:16435;Parent=Msa0258340-mRNA-1
chr2_2 exon 54614724 54614894 54614724 ID=Msa0258340-mRNA-1:exon:16436;Parent=Msa0258340-mRNA-1
chr2_2 exon 54615368 54615439 54615368 ID=Msa0258340-mRNA-1:exon:16437;Parent=Msa0258340-mRNA-1
chr2_2 exon 54615543 54615643 54615543 ID=Msa0258340-mRNA-1:exon:16438;Parent=Msa0258340-mRNA-1
chr2_2 exon 54616705 54616923 54616705 ID=Msa0258340-mRNA-1:exon:16439;Parent=Msa0258340-mRNA-1
chr2_2 exon 54617156 54617291 54617156 ID=Msa0258340-mRNA-1:exon:16440;Parent=Msa0258340-mRNA-1
chr2_2 exon 54617381 54617431 54617381 ID=Msa0258340-mRNA-1:exon:16441;Parent=Msa0258340-mRNA-1
chr2_2 exon 54617550 54617837 54617550 ID=Msa0258340-mRNA-1:exon:16442;Parent=Msa0258340-mRNA-1
chr2_2 exon 54618578 54618812 54618578 ID=Msa0258340-mRNA-1:exon:16443;Parent=Msa0258340-mRNA-1
chr2_2 exon 54621047 54621333 54621047 ID=Msa0258340-mRNA-1:exon:16444;Parent=Msa0258340-mRNA-1
chr2_2 exon 54622201 54622828 54622201 ID=Msa0258340-mRNA-1:exon:16445;Parent=Msa0258340-mRNA-1
chr2_2 five_prime_UTR 54613602 54613783 54613602 ID=Msa0258340-mRNA-1:five_prime_utr;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54613784 54614255 54613784 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54614503 54614600 54614503 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54614724 54614894 54614724 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54615368 54615439 54615368 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54615543 54615643 54615543 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54616705 54616923 54616705 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54617156 54617291 54617156 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54617381 54617431 54617381 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54617550 54617837 54617550 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54618578 54618812 54618578 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54621047 54621333 54621047 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 CDS 54622201 54622422 54622201 ID=Msa0258340-mRNA-1:cds;Parent=Msa0258340-mRNA-1
chr2_2 three_prime_UTR 54622423 54622828 54622423 ID=Msa0258340-mRNA-1:three_prime_utr;Parent=Msa0258340-mRNA-1
Gene Sequence

>Msa0258340

ATGTCCGAACCCGAACCTCGCCAACGTTCGGTACAATGGTCACCGGCGTTATCTACGCCAGAAGCGAAACCAGTTCCACCTTCTTCATGGGCTAAGAAAACCGGTTTCCGGCCAAAATTCTCCGGCGAGACCAATGCCGGTGATTCCGGTCAGATAACCTTACCGCCGGTTAAGTCTAGAGAAGCTGAAGCCAATCCCGATCTCGAAGCAGGTCGTGTTAAGGCAACTCCTCCTCCGCCGGTAGCAAACGGCGAGAAAATTCTACCACCGCTTCCACCGCCTGCAGTGAAGAAACGGAGAGACTCCGATGGAGTTCCGAGTACCAATGGTCAGGTGAAGGTTGAGCAGCCGGTGAGGAGAACGGCGAGGAATGAAGAAGTTGCTGGTTCGTTGCCGCAGACTGTGGATGAGGATGGGTTTGCTTTAAGGCATTCGCATATGAAGTATGAACTAAGAGATTCACCTGGTTTAGTTCCCATTGGTGTGTATGGTATTCAGCATTATGTTTCTATATTAGGTTCATTGATTCTCATTCCACTTGTCATTGTTCCTGCTATGGGAGGATCTCATGAGGAAATTGCTGCAGTGGTCTCAACTGCGCTCTTCGTGTCTGGAGTGACTACATTGTTGCATACATTTTTTGGGTCCAGGTTGCCCTTGATACAAGGGTCTTCTTTTGTTTATCTGGCTCCAGTTTTGGCAATCATCAACTCACCCGAGTTTCAAGGACTGAATGAAAATATAATGTTAATTGTTGTCACATTATTGTTCCAACTAACCGGCATTATCGGTCTTGTCACGGTTTTGTTGTTGAAATTCCGACATATAATGAAGGAGCTGCAGGGGGCTATAATTATTGGATCTGCTTTTCAAACTTTCCTTGGATACACTGGAATTATGTCCCTGTTAGTAAGTTGTGCAAGATTAACTAGAGTAGAAACCAACTATATGTGGGAGGTTTTAGAGGGTGGTAGCAGTGAGAAGGAGGATGGTGTTAAGGCTTTGAGTGTTTTCCGCTCCAAACCCACCTTAGTGGTTCTTCCAAACATAGGAGTAAATAGTCCTGCATCCCCTGCATCCAGTATCCAGACCGCGTTCAAATGGACTACTTATGCCAATGTTGGTCAATTTCTGTTTATCAATCCTGTGGCTGTATCCCCAACCATTGCTGCAGTTGGACTTTCATTTTATGGTTATGGTTTTCCTCTTGTTGGCACATGTATCGAGATTGGTGCAATACAAATATTAGTGGTTATTGTTTTTTCCCTTTATCTTCGTAAGATATCTGTTCTTGGACACCGCATATTTCTAATATATGCAGTTCCTTTGGGTTTGGCAATTACATGGGCAGTTGCTTTCTTGCTGACCGAAGCTGGAGCCTACAACTACAAAGGTTGTGACATAAACATACCTGCCTCAAATATGGTTTCTGAGCACTGCAGAAAGCACATTTCAAGGATGAAATATTGTCGAGTTGATACTTCGCATGCAATCAAATCATCCCCATGGTTTAAATTTCCCTATCCATTGCAATGGGGTACTCCTGTATTCCACTGGAAAATGGCTCTTGTGATGTGCGTGGTTTCCTTAATCTCATCCGTGGATTCGGTTGGCTCATATCATGCATCTTCATTATTAGTAGCATCTAGACCTCCAACTCCTGGGGTTCTTAGTCGCGGAATTGGTCTGGAAGGTCTTTCTAGTGTTTTGGCTGGTCTCTGGGGTACTGGAACTGGATCTACCACTTTAACTGAAAATGTTCATACAATTGCTGTGACTAAAATGGGAAGCCGCAGAGCAGTTCAATTGGGTGCATGTATTCTGATAGTGTTATCTCTCGTGGGGAAGGTTGGAGGGTTCATTGCTTCAATTCCTGGAGTCATGGTTGCTGGTCTCCTCTGCTTTATGTGGGCAATGCTTACAGCATTGGGCTTGTCCAATCTACGCTATAGTGAGGCTGGAAGCTCTCGCAATATCATAATAATTGGATTATCTTTGTTCTTCTCTCTTTCCATACCCGCATACTTTCAACAATATGGCATCTCTCCAAATTCCAACTTGTCAGTGCCAAGTTATTTTCAGCCTTACATTGTGGCTTCTCACGGGCCTTTCCAAAGCAAATATGGAGGGTTGAACTATTTCCTAAACACGATATTTTCGCTGCACATGGTGATAGCTTTTCTTGTCGCCGTTATCTTGGATAATACTGTACCTGGCAGTAAGCAAGAACGCGGAGTATACGTTTGGTCGGAACCTGATGTTGCTAGAAGAGAGCCTGCTATTGCCAAAGACTATGGGTTGCCAATGAGAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCCTGTGA
Protein sequence

>Msa0258340

MSEPEPRQRSVQWSPALSTPEAKPVPPSSWAKKTGFRPKFSGETNAGDSGQITLPPVKSREAEANPDLEAGRVKATPPPPVANGEKILPPLPPPAVKKRRDSDGVPSTNGQVKVEQPVRRTARNEEVAGSLPQTVDEDGFALRHSHMKYELRDSPGLVPIGVYGIQHYVSILGSLILIPLVIVPAMGGSHEEIAAVVSTALFVSGVTTLLHTFFGSRLPLIQGSSFVYLAPVLAIINSPEFQGLNENIMLIVVTLLFQLTGIIGLVTVLLLKFRHIMKELQGAIIIGSAFQTFLGYTGIMSLLVSCARLTRVETNYMWEVLEGGSSEKEDGVKALSVFRSKPTLVVLPNIGVNSPASPASSIQTAFKWTTYANVGQFLFINPVAVSPTIAAVGLSFYGYGFPLVGTCIEIGAIQILVVIVFSLYLRKISVLGHRIFLIYAVPLGLAITWAVAFLLTEAGAYNYKGCDINIPASNMVSEHCRKHISRMKYCRVDTSHAIKSSPWFKFPYPLQWGTPVFHWKMALVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVQLGACILIVLSLVGKVGGFIASIPGVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIIGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYIVASHGPFQSKYGGLNYFLNTIFSLHMVIAFLVAVILDNTVPGSKQERGVYVWSEPDVARREPAIAKDYGLPMRVGRIFRWVKWVGL*