Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781330 | sp|Q9M2U2|TECR_ARATH | 82.315 | 311 | 53 | 2 | 1 | 310 | 1 | 310 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781330 | B7FIH8 | 99.355 | 310 | 2 | 0 | 1 | 310 | 1 | 310 | 0.0 | 640 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025290 | Msa0781330 | 0.821534 | 3.837241e-53 | -8.615850e-47 |
| Msa0051960 | Msa0781330 | -0.818905 | 1.535504e-52 | -8.615850e-47 |
| Msa0072600 | Msa0781330 | 0.852530 | 4.346350e-61 | -8.615850e-47 |
| Msa0101960 | Msa0781330 | -0.816811 | 4.562656e-52 | -8.615850e-47 |
| Msa0603690 | Msa0781330 | 0.817791 | 2.746010e-52 | -8.615850e-47 |
| Msa0613420 | Msa0781330 | -0.823544 | 1.308534e-53 | -8.615850e-47 |
| Msa0637930 | Msa0781330 | 0.851298 | 9.718817e-61 | -8.615850e-47 |
| Msa0638010 | Msa0781330 | 0.821933 | 3.102247e-53 | -8.615850e-47 |
| Msa0781330 | Msa0860880 | 0.937841 | 1.795520e-98 | -8.615850e-47 |
| Msa0781330 | Msa0881530 | 0.814782 | 1.293009e-51 | -8.615850e-47 |
| Msa0781330 | Msa0968470 | 0.813291 | 2.757812e-51 | -8.615850e-47 |
| Msa0781330 | Msa0982090 | 0.804966 | 1.676329e-49 | -8.615850e-47 |
| Msa0781330 | Msa1079720 | 0.811956 | 5.402332e-51 | -8.615850e-47 |
| Msa0781330 | Msa1124530 | 0.821912 | 3.137866e-53 | -8.615850e-47 |
| Msa0781330 | Msa1129300 | 0.816772 | 4.655382e-52 | -8.615850e-47 |
| Msa0781330 | Msa1152780 | 0.816008 | 6.898410e-52 | -8.615850e-47 |
| Msa0781330 | Msa1159160 | -0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0781330 | Msa1191020 | 0.800059 | 1.721320e-48 | -8.615850e-47 |
| Msa0781330 | Msa1208450 | 0.801960 | 7.034468e-49 | -8.615850e-47 |
| Msa0781330 | Msa1298390 | 0.811449 | 6.961746e-51 | -8.615850e-47 |
| Msa0781330 | Msa1382380 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
| Msa0781330 | Msa1460060 | 0.920496 | 1.189700e-87 | -8.615850e-47 |
| Msa0187590 | Msa0781330 | 0.807969 | 3.897692e-50 | -8.615850e-47 |
| Msa0213620 | Msa0781330 | 0.829905 | 3.962689e-55 | -8.615850e-47 |
| Msa0234410 | Msa0781330 | 0.809274 | 2.051930e-50 | -8.615850e-47 |
| Msa0367540 | Msa0781330 | 0.814687 | 1.356837e-51 | -8.615850e-47 |
| Msa0374340 | Msa0781330 | 0.827015 | 1.975621e-54 | -8.615850e-47 |
| Msa0374420 | Msa0781330 | 0.832832 | 7.546505e-56 | -8.615850e-47 |
| Msa0383870 | Msa0781330 | 0.802091 | 6.611583e-49 | -8.615850e-47 |
| Msa0388080 | Msa0781330 | 0.823608 | 1.263898e-53 | -8.615850e-47 |
| Msa0403480 | Msa0781330 | 0.815680 | 8.167030e-52 | -8.615850e-47 |
| Msa0415160 | Msa0781330 | 0.810765 | 9.793953e-51 | -8.615850e-47 |
| Msa0480090 | Msa0781330 | 0.819963 | 8.811437e-53 | -8.615850e-47 |
| Msa0258340 | Msa0781330 | 0.830647 | 2.610293e-55 | -8.615850e-47 |
| Msa0310730 | Msa0781330 | 0.811216 | 7.821523e-51 | -8.615850e-47 |
| Msa0515440 | Msa0781330 | 0.819903 | 9.096476e-53 | -8.615850e-47 |
| Msa0548650 | Msa0781330 | 0.851310 | 9.647410e-61 | -8.615850e-47 |
| Msa0558650 | Msa0781330 | -0.815746 | 7.895523e-52 | -8.615850e-47 |
| Msa0589260 | Msa0781330 | 0.804940 | 1.696779e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781330 | MtrunA17_Chr5g0440411 | 99.355 | 310 | 2 | 0 | 1 | 310 | 1 | 310 | 0.0 | 640 |
| Msa0781330 | MtrunA17_Chr6g0464451 | 29.240 | 171 | 112 | 4 | 140 | 309 | 147 | 309 | 3.44e-13 | 68.9 |
| Msa0781330 | MtrunA17_Chr6g0464411 | 30.544 | 239 | 132 | 9 | 61 | 288 | 43 | 258 | 9.48e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781330 | AT3G55360.1 | 82.315 | 311 | 53 | 2 | 1 | 310 | 1 | 310 | 0.0 | 541 |
| Msa0781330 | AT5G16010.1 | 29.231 | 130 | 90 | 2 | 139 | 267 | 102 | 230 | 3.24e-12 | 66.2 |
Find 124 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATGTGGGTTTGAAAATT+TGG | 0.154935 | 5_2:+63796558 | None:intergenic |
| TTGATATTTCTATCATATTT+TGG | 0.167659 | 5_2:-63793056 | Msa0781330:three_prime_UTR |
| CCATTACGCCAAACGAATTC+TGG | 0.194582 | 5_2:-63794496 | Msa0781330:CDS |
| GAATTAGAAGTACCTGAATT+AGG | 0.237978 | 5_2:+63796501 | None:intergenic |
| TTCATTTGAAGGTCACTTAC+AGG | 0.239953 | 5_2:+63794348 | None:intergenic |
| CTGCCTTGATGGATGCTTCT+TGG | 0.246723 | 5_2:+63794806 | None:intergenic |
| ATGAAGATAGGCTTTGGATT+TGG | 0.247840 | 5_2:-63794330 | Msa0781330:CDS |
| TCCGCAACTGTGCTTATTAC+TGG | 0.262844 | 5_2:-63794419 | Msa0781330:CDS |
| TGAAGATAGGCTTTGGATTT+GGG | 0.293757 | 5_2:-63794329 | Msa0781330:CDS |
| AGTGGAAGAGAGATTGTTAA+AGG | 0.294260 | 5_2:-63796007 | Msa0781330:CDS |
| GTCACTTACAGGGGTGTATA+GGG | 0.307392 | 5_2:+63794359 | None:intergenic |
| TTTATAGGTGCTAGTTCTAT+TGG | 0.310867 | 5_2:-63796135 | Msa0781330:intron |
| TGAAGGTCACTGTGGTTTCT+AGG | 0.313807 | 5_2:-63796030 | Msa0781330:CDS |
| GGTCACTTACAGGGGTGTAT+AGG | 0.327530 | 5_2:+63794358 | None:intergenic |
| GTCCTTGAACGTTACAGTTA+AGG | 0.339195 | 5_2:+63794686 | None:intergenic |
| GGCTACTGTAGCAGATTTGC+AGG | 0.343092 | 5_2:-63795774 | Msa0781330:CDS |
| AATTAGAAGTACCTGAATTA+GGG | 0.345169 | 5_2:+63796502 | None:intergenic |
| ATGTATGCATTAATGGAATA+TGG | 0.358460 | 5_2:+63796658 | None:intergenic |
| CTTCAAATGAAGATAGGCTT+TGG | 0.359794 | 5_2:-63794336 | Msa0781330:CDS |
| TGTGCTTATTACTGGACATT+TGG | 0.362923 | 5_2:-63794411 | Msa0781330:CDS |
| GAAGATTCCTCAGTATAATA+TGG | 0.369628 | 5_2:+63794277 | None:intergenic |
| AAATGTTTCCAGAATTCGTT+TGG | 0.370339 | 5_2:+63794488 | None:intergenic |
| ATTGCAACGCAAACCATTGC+CGG | 0.389032 | 5_2:-63794147 | Msa0781330:CDS |
| CAAAGCCTATCTTCATTTGA+AGG | 0.389390 | 5_2:+63794337 | None:intergenic |
| CCGAAATACTCGTAGACAAC+GGG | 0.390772 | 5_2:+63794579 | None:intergenic |
| TTACACTCTACCCCTAATTC+AGG | 0.391598 | 5_2:-63796513 | Msa0781330:intron |
| CCCGTTGTCTACGAGTATTT+CGG | 0.392516 | 5_2:-63794579 | Msa0781330:CDS |
| CCAGAATTCGTTTGGCGTAA+TGG | 0.393749 | 5_2:+63794496 | None:intergenic |
| CAGGTCAATGTATGCATTAA+TGG | 0.399354 | 5_2:+63796651 | None:intergenic |
| CTTGACACTTCCTGTCCAAC+CGG | 0.402666 | 5_2:-63794781 | Msa0781330:CDS |
| TTGGTGAAGTGGGTGTGTTT+TGG | 0.404400 | 5_2:-63796062 | Msa0781330:five_prime_UTR |
| GTGTACCTGCAGTTGTTTGA+TGG | 0.409094 | 5_2:-63793400 | Msa0781330:intron |
| AGTGTGTTGGTTACACTGTT+TGG | 0.411947 | 5_2:-63796081 | Msa0781330:five_prime_UTR |
| AACCTTAACTGTAACGTTCA+AGG | 0.415365 | 5_2:-63794688 | Msa0781330:CDS |
| AGGAATCTTCGTGGACCTGC+TGG | 0.422036 | 5_2:-63794264 | Msa0781330:CDS |
| TCCTTTGATCCCGGTTGGAC+AGG | 0.438015 | 5_2:+63794771 | None:intergenic |
| GGCTGGGGCTCCTACAGAAA+TGG | 0.439371 | 5_2:+63793331 | None:intergenic |
| CAGTGATTTGTGAAGTGTGT+TGG | 0.448060 | 5_2:-63796094 | Msa0781330:five_prime_UTR |
| AGTGACCTTCAAATGAAGAT+AGG | 0.453400 | 5_2:-63794342 | Msa0781330:CDS |
| GAATTTAAGATGGGGAAGGA+TGG | 0.459680 | 5_2:+63796594 | None:intergenic |
| ACAGAGATTTACCAGTGGTT+GGG | 0.462151 | 5_2:-63794177 | Msa0781330:CDS |
| ACTTAAAACTTCAAAACTAC+TGG | 0.474779 | 5_2:-63792963 | Msa0781330:three_prime_UTR |
| ATAACCATCACTTCAGTGGC+TGG | 0.477306 | 5_2:+63793314 | None:intergenic |
| AGTGTCAAGCGCTGCCTTGA+TGG | 0.477346 | 5_2:+63794795 | None:intergenic |
| TGATATCCACCTTCTCCAGC+AGG | 0.491305 | 5_2:+63794249 | None:intergenic |
| TCCTGTCCAACCGGGATCAA+AGG | 0.492864 | 5_2:-63794772 | Msa0781330:CDS |
| AACAGAGATTTACCAGTGGT+TGG | 0.493932 | 5_2:-63794178 | Msa0781330:CDS |
| GGTTACACTGTTTGGTGAAG+TGG | 0.502126 | 5_2:-63796073 | Msa0781330:five_prime_UTR |
| GACGGCAAGAAATATATAAC+CGG | 0.506359 | 5_2:+63794128 | None:intergenic |
| GGATGGATTAATGTGAGGTA+TGG | 0.506522 | 5_2:+63796611 | None:intergenic |
| ACTGTAACGTTCAAGGACTT+AGG | 0.507815 | 5_2:-63794681 | Msa0781330:CDS |
| GGCCGAGGTACCCTCGTCGG+TGG | 0.508785 | 5_2:-63793366 | Msa0781330:CDS |
| TAACCATCACTTCAGTGGCT+GGG | 0.511902 | 5_2:+63793315 | None:intergenic |
| AAGAAATATATAACCGGCAA+TGG | 0.521615 | 5_2:+63794134 | None:intergenic |
| GTTGCGGAAAACATTGGAAA+GGG | 0.523442 | 5_2:+63794434 | None:intergenic |
| GTTACACTGTTTGGTGAAGT+GGG | 0.523573 | 5_2:-63796072 | Msa0781330:five_prime_UTR |
| TACATGGCATATGTCTGCAC+AGG | 0.523747 | 5_2:+63794531 | None:intergenic |
| CAGTTGTTTGATGGAAAGGA+AGG | 0.528249 | 5_2:-63793391 | Msa0781330:CDS |
| GATATTGCCTCCATTTCTGT+AGG | 0.528268 | 5_2:-63793341 | Msa0781330:exon |
| TCATTTGAAGGTCACTTACA+GGG | 0.529579 | 5_2:+63794349 | None:intergenic |
| AGACATATGCCATGTACTAT+TGG | 0.530822 | 5_2:-63794524 | Msa0781330:CDS |
| CTTCGTGGACCTGCTGGAGA+AGG | 0.532866 | 5_2:-63794258 | Msa0781330:CDS |
| AACCATCACTTCAGTGGCTG+GGG | 0.535274 | 5_2:+63793316 | None:intergenic |
| AGCCCCAGCCACTGAAGTGA+TGG | 0.541810 | 5_2:-63793318 | Msa0781330:three_prime_UTR |
| AAAACACAGGCGCTTGAAGA+AGG | 0.542376 | 5_2:-63794073 | Msa0781330:intron |
| TACGAGTATTTCGGCTACAA+AGG | 0.543041 | 5_2:-63794570 | Msa0781330:CDS |
| CCTGCAGTTGTTTGATGGAA+AGG | 0.543183 | 5_2:-63793395 | Msa0781330:intron |
| GTCACTGTGGTTTCTAGGAG+TGG | 0.545999 | 5_2:-63796025 | Msa0781330:CDS |
| ATGGAAAGGAAGGGAGGCCG+AGG | 0.552898 | 5_2:-63793381 | Msa0781330:CDS |
| TAAGAAAGAAAGCAAAATGT+GGG | 0.552975 | 5_2:+63796545 | None:intergenic |
| TGGAAAGGGGCGAAGTTGCA+TGG | 0.556188 | 5_2:+63794448 | None:intergenic |
| AGCACAGTTGCGGAAAACAT+TGG | 0.558230 | 5_2:+63794428 | None:intergenic |
| TGAAACAATGCAGACACTAA+AGG | 0.558480 | 5_2:+63793023 | None:intergenic |
| ACGGGGAAGTAGTAGAAGAC+TGG | 0.561573 | 5_2:+63794597 | None:intergenic |
| CGTGGACCTGCTGGAGAAGG+TGG | 0.567577 | 5_2:-63794255 | Msa0781330:CDS |
| GGTTAGTACAAGATGAGGCC+AGG | 0.567866 | 5_2:+63796632 | None:intergenic |
| CAATGTTGAAGCCCAACCAC+TGG | 0.568163 | 5_2:+63794166 | None:intergenic |
| GATTATCGATTATCGTAGCA+TGG | 0.575054 | 5_2:-63793120 | Msa0781330:three_prime_UTR |
| CATTAATGCATACATTGACC+TGG | 0.578293 | 5_2:-63796650 | Msa0781330:five_prime_UTR |
| ATTATACTGAGGAATCTTCG+TGG | 0.579382 | 5_2:-63794273 | Msa0781330:CDS |
| CTAAGAAAGAAAGCAAAATG+TGG | 0.582031 | 5_2:+63796544 | None:intergenic |
| GGAAGAGAGATTGTTAAAGG+TGG | 0.583648 | 5_2:-63796004 | Msa0781330:CDS |
| GAAGTCACCACTCTGCTCAC+AGG | 0.589666 | 5_2:-63793291 | Msa0781330:three_prime_UTR |
| AGTCTCAATGACTATACAAG+TGG | 0.590878 | 5_2:-63794720 | Msa0781330:CDS |
| AGTTGCGGAAAACATTGGAA+AGG | 0.592239 | 5_2:+63794433 | None:intergenic |
| ACCCACCGACGAGGGTACCT+CGG | 0.593529 | 5_2:+63793364 | None:intergenic |
| TCCAGTAATAAGCACAGTTG+CGG | 0.593571 | 5_2:+63794418 | None:intergenic |
| TAATGGAATATGGTTAGAGT+AGG | 0.594894 | 5_2:+63796668 | None:intergenic |
| TTGACACTTCCTGTCCAACC+GGG | 0.596671 | 5_2:-63794780 | Msa0781330:CDS |
| TTTATTGCCATATTATACTG+AGG | 0.605844 | 5_2:-63794284 | Msa0781330:CDS |
| CAGCCAAGAAGCATCCATCA+AGG | 0.606217 | 5_2:-63794809 | Msa0781330:CDS |
| CATTTGAAGGTCACTTACAG+GGG | 0.612750 | 5_2:+63794350 | None:intergenic |
| ATGGAAACACCAATAGTACA+TGG | 0.615120 | 5_2:+63794515 | None:intergenic |
| TGGAGAATTTAAGATGGGGA+AGG | 0.618654 | 5_2:+63796590 | None:intergenic |
| ACTGGGCTCTTGCAAAACAC+AGG | 0.618820 | 5_2:-63794086 | Msa0781330:CDS |
| TCACTTACAGGGGTGTATAG+GGG | 0.622126 | 5_2:+63794360 | None:intergenic |
| AAGACTGGATAGAGAAGCAA+CGG | 0.623023 | 5_2:+63794612 | None:intergenic |
| GGTCATGATAAAAGCAGCGA+CGG | 0.625472 | 5_2:+63794110 | None:intergenic |
| AGTTGTTTGATGGAAAGGAA+GGG | 0.625743 | 5_2:-63793390 | Msa0781330:CDS |
| GGGAAGGATGGATTAATGTG+AGG | 0.629378 | 5_2:+63796606 | None:intergenic |
| CTTCATAACCATCACTTCAG+TGG | 0.630051 | 5_2:+63793310 | None:intergenic |
| TGGGGCTCCTACAGAAATGG+AGG | 0.630314 | 5_2:+63793334 | None:intergenic |
| ACTCAAAGAAGAAAAGCGTA+CGG | 0.636330 | 5_2:+63794643 | None:intergenic |
| GCCGAAATACTCGTAGACAA+CGG | 0.644557 | 5_2:+63794578 | None:intergenic |
| TTACAGGGGTGTATAGGGGA+TGG | 0.652446 | 5_2:+63794364 | None:intergenic |
| GGAGGCCGAGGTACCCTCGT+CGG | 0.660981 | 5_2:-63793369 | Msa0781330:CDS |
| ATTAGAAGTACCTGAATTAG+GGG | 0.663447 | 5_2:+63796503 | None:intergenic |
| AAAATGGAGAATTTAAGATG+GGG | 0.665263 | 5_2:+63796586 | None:intergenic |
| TGTTTGATGGAAAGGAAGGG+AGG | 0.665428 | 5_2:-63793387 | Msa0781330:CDS |
| AGCGTACGGTAAGAAACTTG+TGG | 0.676112 | 5_2:+63794657 | None:intergenic |
| TTGCGGAAAACATTGGAAAG+GGG | 0.678424 | 5_2:+63794435 | None:intergenic |
| AACAATGCAGACACTAAAGG+AGG | 0.678624 | 5_2:+63793026 | None:intergenic |
| TACTGTAGCAGATTTGCAGG+AGG | 0.680029 | 5_2:-63795771 | Msa0781330:CDS |
| GCAATATCACCCACCGACGA+GGG | 0.681535 | 5_2:+63793356 | None:intergenic |
| GGTATGGTTAGTACAAGATG+AGG | 0.691398 | 5_2:+63796627 | None:intergenic |
| ACATGGCATATGTCTGCACA+GGG | 0.710473 | 5_2:+63794532 | None:intergenic |
| TCAGAATCCTGTGAGCAGAG+TGG | 0.718980 | 5_2:+63793284 | None:intergenic |
| TATTGAAGAGAAAGCCACGT+GGG | 0.722862 | 5_2:+63794223 | None:intergenic |
| CGAAATACTCGTAGACAACG+GGG | 0.728914 | 5_2:+63794580 | None:intergenic |
| TGGCATATGTCTGCACAGGG+TGG | 0.739067 | 5_2:+63794535 | None:intergenic |
| TTTGAAGATGAAGGTCACTG+TGG | 0.749871 | 5_2:-63796038 | Msa0781330:exon |
| ATACAACAGAGATTTACCAG+TGG | 0.769592 | 5_2:-63794182 | Msa0781330:CDS |
| ATATTGAAGAGAAAGCCACG+TGG | 0.769930 | 5_2:+63794222 | None:intergenic |
| GGTGGATATCAAATCCCACG+TGG | 0.798768 | 5_2:-63794237 | Msa0781330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGGAAATAAATTATATTT+TGG | - | chr5_2:63793747-63793766 | Msa0781330:intron | 10.0% |
| !! | TTATAAAAATAAGCTAAAAA+TGG | + | chr5_2:63795763-63795782 | None:intergenic | 10.0% |
| !!! | TTTTTGTGTGTTTTTTTTTT+TGG | - | chr5_2:63793450-63793469 | Msa0781330:intron | 15.0% |
| !!! | TTTTTTTTTTGGAGTTTTAT+AGG | - | chr5_2:63793461-63793480 | Msa0781330:intron | 15.0% |
| !! | TTTATATTGTGAAAAAAAGT+GGG | + | chr5_2:63794331-63794350 | None:intergenic | 15.0% |
| !!! | TTTTATATTGTGAAAAAAAG+TGG | + | chr5_2:63794332-63794351 | None:intergenic | 15.0% |
| !! | GTATAACAAAAAATAAAATG+AGG | + | chr5_2:63795821-63795840 | None:intergenic | 15.0% |
| !! | ATTAACAATTAAAATATGCA+AGG | + | chr5_2:63796174-63796193 | None:intergenic | 15.0% |
| !!! | TTGATATTTCTATCATATTT+TGG | - | chr5_2:63796555-63796574 | Msa0781330:five_prime_UTR | 15.0% |
| !!! | AAAAATGGAGAATTTAAGAT+GGG | + | chr5_2:63793029-63793048 | None:intergenic | 20.0% |
| !! | TGAAAATTTGGATAGAAAAA+TGG | + | chr5_2:63793044-63793063 | None:intergenic | 20.0% |
| !! | CAAACTTTAATGAAGAAAAT+TGG | + | chr5_2:63793264-63793283 | None:intergenic | 20.0% |
| !!! | TGTTTGTTTTTGTCATAAAA+GGG | - | chr5_2:63793699-63793718 | Msa0781330:intron | 20.0% |
| !! | AAAAACAACTCTATAAATCA+TGG | + | chr5_2:63793801-63793820 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTTGCCAC+AGG | - | chr5_2:63793816-63793835 | Msa0781330:intron | 20.0% |
| !! | TATAAAATGATCTTGAAGTT+TGG | - | chr5_2:63794345-63794364 | Msa0781330:CDS | 20.0% |
| !! | ATAAAATGATCTTGAAGTTT+GGG | - | chr5_2:63794346-63794365 | Msa0781330:CDS | 20.0% |
| !!! | ATCCAATTCCTATTATTTTA+TGG | - | chr5_2:63794654-63794673 | Msa0781330:CDS | 20.0% |
| !! | TAAGAAAGCCATAAAATAAT+AGG | + | chr5_2:63794665-63794684 | None:intergenic | 20.0% |
| !!! | TTTTTGTAATTCAAAACAAC+AGG | + | chr5_2:63794870-63794889 | None:intergenic | 20.0% |
| !!! | AACTGTTTGATTTTAAATTG+AGG | - | chr5_2:63795944-63795963 | Msa0781330:intron | 20.0% |
| !! | ATGCAAAAGAATAACAATAT+TGG | + | chr5_2:63796150-63796169 | None:intergenic | 20.0% |
| ! | ATGTATGCATTAATGGAATA+TGG | + | chr5_2:63792956-63792975 | None:intergenic | 25.0% |
| !! | AAAATGGAGAATTTAAGATG+GGG | + | chr5_2:63793028-63793047 | None:intergenic | 25.0% |
| ! | GAAAAATGGAGAATTTAAGA+TGG | + | chr5_2:63793030-63793049 | None:intergenic | 25.0% |
| ! | AAAATGTGGGTTTGAAAATT+TGG | + | chr5_2:63793056-63793075 | None:intergenic | 25.0% |
| ! | TAAGAAAGAAAGCAAAATGT+GGG | + | chr5_2:63793069-63793088 | None:intergenic | 25.0% |
| !!! | AATTAGAAGTACCTGAATTA+GGG | + | chr5_2:63793112-63793131 | None:intergenic | 25.0% |
| !!! | ATTCTTCTACTTTTCCAATT+AGG | - | chr5_2:63793138-63793157 | Msa0781330:three_prime_UTR | 25.0% |
| !!! | TCCAATTAGGTTTTTCAATA+TGG | - | chr5_2:63793151-63793170 | Msa0781330:three_prime_UTR | 25.0% |
| ! | ACCATATTGAAAAACCTAAT+TGG | + | chr5_2:63793155-63793174 | None:intergenic | 25.0% |
| !!! | CAATATGGTTTCTGATTTTT+TGG | - | chr5_2:63793166-63793185 | Msa0781330:three_prime_UTR | 25.0% |
| !! | GTACCAAAATTTTCTGTTTA+CGG | - | chr5_2:63793188-63793207 | Msa0781330:three_prime_UTR | 25.0% |
| !! | TTTTGTAAGAAAGTAACAGT+GGG | + | chr5_2:63793310-63793329 | None:intergenic | 25.0% |
| !! | GTTACTTTCTTACAAAAGAT+TGG | - | chr5_2:63793313-63793332 | Msa0781330:three_prime_UTR | 25.0% |
| !!! | GTGTTTGTTTTTGTCATAAA+AGG | - | chr5_2:63793698-63793717 | Msa0781330:intron | 25.0% |
| !!! | GATTTCTTAGGTTGATTTAT+AGG | - | chr5_2:63793729-63793748 | Msa0781330:intron | 25.0% |
| ! | TTAGAATGAAAGTTTCTTCT+CGG | - | chr5_2:63794378-63794397 | Msa0781330:CDS | 25.0% |
| !!! | TTAACCCACTTTTTGTATTT+TGG | - | chr5_2:63794411-63794430 | Msa0781330:CDS | 25.0% |
| !! | ACAGTTAACCCAATTTTTAT+TGG | - | chr5_2:63794467-63794486 | Msa0781330:CDS | 25.0% |
| ! | TCTGCAATCCAATAAAAATT+GGG | + | chr5_2:63794478-63794497 | None:intergenic | 25.0% |
| ! | TTCTGCAATCCAATAAAAAT+TGG | + | chr5_2:63794479-63794498 | None:intergenic | 25.0% |
| !! | ACAGTTAACCCAATTTTTAT+TGG | - | chr5_2:63794467-63794486 | Msa0781330:CDS | 25.0% |
| ! | TCTGCAATCCAATAAAAATT+GGG | + | chr5_2:63794478-63794497 | None:intergenic | 25.0% |
| ! | TTCTGCAATCCAATAAAAAT+TGG | + | chr5_2:63794479-63794498 | None:intergenic | 25.0% |
| ! | AGCCATAAAATAATAGGAAT+TGG | + | chr5_2:63794659-63794678 | None:intergenic | 25.0% |
| !!! | CATATTTTTTCTTTTGAGAG+AGG | + | chr5_2:63794701-63794720 | None:intergenic | 25.0% |
| !! | CTTTTCTTCTTTGAGTATTT+GGG | - | chr5_2:63794975-63794994 | Msa0781330:intron | 25.0% |
| !! | TTTTCTTCTTTGAGTATTTG+GGG | - | chr5_2:63794976-63794995 | Msa0781330:intron | 25.0% |
| ! | TTTATTGCCATATTATACTG+AGG | - | chr5_2:63795327-63795346 | Msa0781330:intron | 25.0% |
| ! | TTAGTGAACTACAAAAGAAA+AGG | + | chr5_2:63795576-63795595 | None:intergenic | 25.0% |
| ! | TAGTTCACTAATTCAGTTTA+TGG | - | chr5_2:63795585-63795604 | Msa0781330:intron | 25.0% |
| ! | AGCATATATAAAGACCTATT+TGG | - | chr5_2:63795650-63795669 | Msa0781330:intron | 25.0% |
| !! | GTTTTCGCTAAAAACTATTT+TGG | + | chr5_2:63795791-63795810 | None:intergenic | 25.0% |
| ! | TAAGTGTGATGTTTATTGTT+TGG | - | chr5_2:63796041-63796060 | Msa0781330:exon | 25.0% |
| ! | ACTTAAAACTTCAAAACTAC+TGG | - | chr5_2:63796648-63796667 | Msa0781330:five_prime_UTR | 25.0% |
| TAATGGAATATGGTTAGAGT+AGG | + | chr5_2:63792946-63792965 | None:intergenic | 30.0% | |
| CTAAGAAAGAAAGCAAAATG+TGG | + | chr5_2:63793070-63793089 | None:intergenic | 30.0% | |
| !! | ATTAGAAGTACCTGAATTAG+GGG | + | chr5_2:63793111-63793130 | None:intergenic | 30.0% |
| !! | GAATTAGAAGTACCTGAATT+AGG | + | chr5_2:63793113-63793132 | None:intergenic | 30.0% |
| TGGAAAAGTAGAAGAATGAA+GGG | + | chr5_2:63793135-63793154 | None:intergenic | 30.0% | |
| TTGGAAAAGTAGAAGAATGA+AGG | + | chr5_2:63793136-63793155 | None:intergenic | 30.0% | |
| ! | CAACCGTAAACAGAAAATTT+TGG | + | chr5_2:63793194-63793213 | None:intergenic | 30.0% |
| TCGATGAAAACAATGAATGT+GGG | + | chr5_2:63793238-63793257 | None:intergenic | 30.0% | |
| TTCGATGAAAACAATGAATG+TGG | + | chr5_2:63793239-63793258 | None:intergenic | 30.0% | |
| TTTGTAAGAAAGTAACAGTG+GGG | + | chr5_2:63793309-63793328 | None:intergenic | 30.0% | |
| ! | CTTTTGTAAGAAAGTAACAG+TGG | + | chr5_2:63793311-63793330 | None:intergenic | 30.0% |
| !! | TTTATAGGTGCTAGTTCTAT+TGG | - | chr5_2:63793476-63793495 | Msa0781330:intron | 30.0% |
| !!! | TGTTTTGGTTTTGAAGATGA+AGG | - | chr5_2:63793564-63793583 | Msa0781330:intron | 30.0% |
| !!! | AAGGGTAGTTTTGATTTCTT+AGG | - | chr5_2:63793717-63793736 | Msa0781330:intron | 30.0% |
| GTTTCTATATAGTATCGTGT+TGG | - | chr5_2:63793992-63794011 | Msa0781330:intron | 30.0% | |
| TTGAAATTGTTTCCAACCTT+GGG | - | chr5_2:63794056-63794075 | Msa0781330:intron | 30.0% | |
| ! | TTACATTTGAGACACTCAAA+CGG | + | chr5_2:63794108-63794127 | None:intergenic | 30.0% |
| AAAAAAGTGGGACTTATGAT+GGG | + | chr5_2:63794319-63794338 | None:intergenic | 30.0% | |
| AAAAAAAGTGGGACTTATGA+TGG | + | chr5_2:63794320-63794339 | None:intergenic | 30.0% | |
| CAGACCAAAATACAAAAAGT+GGG | + | chr5_2:63794418-63794437 | None:intergenic | 30.0% | |
| ACAGACCAAAATACAAAAAG+TGG | + | chr5_2:63794419-63794438 | None:intergenic | 30.0% | |
| TTGGATGAAATGAATTGAAC+TGG | + | chr5_2:63794640-63794659 | None:intergenic | 30.0% | |
| CAAATCACGTTAATGAGTTA+TGG | + | chr5_2:63794766-63794785 | None:intergenic | 30.0% | |
| ! | GCTTTTCTTCTTTGAGTATT+TGG | - | chr5_2:63794974-63794993 | Msa0781330:intron | 30.0% |
| AAATGTTTCCAGAATTCGTT+TGG | + | chr5_2:63795126-63795145 | None:intergenic | 30.0% | |
| GAAGATTCCTCAGTATAATA+TGG | + | chr5_2:63795337-63795356 | None:intergenic | 30.0% | |
| AAGAAATATATAACCGGCAA+TGG | + | chr5_2:63795480-63795499 | None:intergenic | 30.0% | |
| GAACTACAAAAGAAAAGGTA+AGG | + | chr5_2:63795571-63795590 | None:intergenic | 30.0% | |
| AATAAGCTAAAAATGGCTGA+TGG | + | chr5_2:63795756-63795775 | None:intergenic | 30.0% | |
| CATAAGCGCTTATCATATAA+GGG | + | chr5_2:63795862-63795881 | None:intergenic | 30.0% | |
| GTAAGTGTTCATATGTGATA+TGG | - | chr5_2:63795918-63795937 | Msa0781330:intron | 30.0% | |
| !! | GAGGATTTTGAAAGTTTTGT+CGG | - | chr5_2:63795963-63795982 | Msa0781330:intron | 30.0% |
| TTAATCTTGCATCTTGTCTT+TGG | - | chr5_2:63796189-63796208 | Msa0781330:intron | 30.0% | |
| CAGGTCAATGTATGCATTAA+TGG | + | chr5_2:63792963-63792982 | None:intergenic | 35.0% | |
| CATTAATGCATACATTGACC+TGG | - | chr5_2:63792961-63792980 | Msa0781330:three_prime_UTR | 35.0% | |
| ATGTGGGTCATCGTTAAATT+AGG | + | chr5_2:63793222-63793241 | None:intergenic | 35.0% | |
| AAAGATTGGAACTTGACATG+TGG | - | chr5_2:63793327-63793346 | Msa0781330:exon | 35.0% | |
| AAGATTGGAACTTGACATGT+GGG | - | chr5_2:63793328-63793347 | Msa0781330:exon | 35.0% | |
| !! | TTTAGTGCTGATGTGTATGA+TGG | - | chr5_2:63793412-63793431 | Msa0781330:intron | 35.0% |
| !! | TTAGTGCTGATGTGTATGAT+GGG | - | chr5_2:63793413-63793432 | Msa0781330:intron | 35.0% |
| AGTGGAAGAGAGATTGTTAA+AGG | - | chr5_2:63793604-63793623 | Msa0781330:intron | 35.0% | |
| !! | ACCGAAGTTAAGTTGATCAA+AGG | - | chr5_2:63793945-63793964 | Msa0781330:intron | 35.0% |
| GCCTTTGATCAACTTAACTT+CGG | + | chr5_2:63793949-63793968 | None:intergenic | 35.0% | |
| ATCAAAGGCTTATGTCTTGA+TGG | - | chr5_2:63793960-63793979 | Msa0781330:intron | 35.0% | |
| GTTGGAAACAATTTCAACAG+AGG | + | chr5_2:63794053-63794072 | None:intergenic | 35.0% | |
| GTTGAAATTGTTTCCAACCT+TGG | - | chr5_2:63794055-63794074 | Msa0781330:intron | 35.0% | |
| GCAAATAAACCGATTGTGTT+TGG | - | chr5_2:63794078-63794097 | Msa0781330:CDS | 35.0% | |
| ! | AACGGATTTCCAAACACAAT+CGG | + | chr5_2:63794090-63794109 | None:intergenic | 35.0% |
| ACTGACATTTAAATGTGAGG+TGG | + | chr5_2:63794180-63794199 | None:intergenic | 35.0% | |
| GTGACTGACATTTAAATGTG+AGG | + | chr5_2:63794183-63794202 | None:intergenic | 35.0% | |
| ! | TTGCAGCTTTGTGAAAATCA+CGG | + | chr5_2:63794205-63794224 | None:intergenic | 35.0% |
| ! | GTGTTTGGAAATCCTTTTGA+GGG | + | chr5_2:63794296-63794315 | None:intergenic | 35.0% |
| AAAAAGTGGGACTTATGATG+GGG | + | chr5_2:63794318-63794337 | None:intergenic | 35.0% | |
| CTGGATGAAATGAATTGAAC+TGG | + | chr5_2:63794527-63794546 | None:intergenic | 35.0% | |
| AGTCTCAATGACTATACAAG+TGG | - | chr5_2:63794891-63794910 | Msa0781330:intron | 35.0% | |
| AACCTTAACTGTAACGTTCA+AGG | - | chr5_2:63794923-63794942 | Msa0781330:intron | 35.0% | |
| ! | ACTCAAAGAAGAAAAGCGTA+CGG | + | chr5_2:63794971-63794990 | None:intergenic | 35.0% |
| AGACATATGCCATGTACTAT+TGG | - | chr5_2:63795087-63795106 | Msa0781330:intron | 35.0% | |
| ATGGAAACACCAATAGTACA+TGG | + | chr5_2:63795099-63795118 | None:intergenic | 35.0% | |
| TGTGCTTATTACTGGACATT+TGG | - | chr5_2:63795200-63795219 | Msa0781330:intron | 35.0% | |
| TCATTTGAAGGTCACTTACA+GGG | + | chr5_2:63795265-63795284 | None:intergenic | 35.0% | |
| TTCATTTGAAGGTCACTTAC+AGG | + | chr5_2:63795266-63795285 | None:intergenic | 35.0% | |
| AGTGACCTTCAAATGAAGAT+AGG | - | chr5_2:63795269-63795288 | Msa0781330:intron | 35.0% | |
| CAAAGCCTATCTTCATTTGA+AGG | + | chr5_2:63795277-63795296 | None:intergenic | 35.0% | |
| CTTCAAATGAAGATAGGCTT+TGG | - | chr5_2:63795275-63795294 | Msa0781330:intron | 35.0% | |
| !! | ATGAAGATAGGCTTTGGATT+TGG | - | chr5_2:63795281-63795300 | Msa0781330:intron | 35.0% |
| !! | TGAAGATAGGCTTTGGATTT+GGG | - | chr5_2:63795282-63795301 | Msa0781330:intron | 35.0% |
| ATTATACTGAGGAATCTTCG+TGG | - | chr5_2:63795338-63795357 | Msa0781330:intron | 35.0% | |
| ATACAACAGAGATTTACCAG+TGG | - | chr5_2:63795429-63795448 | Msa0781330:intron | 35.0% | |
| GACGGCAAGAAATATATAAC+CGG | + | chr5_2:63795486-63795505 | None:intergenic | 35.0% | |
| ! | TGCTTTTATCATGACCAACT+GGG | - | chr5_2:63795508-63795527 | Msa0781330:intron | 35.0% |
| CTCAAACAAGTCATCCAAAT+AGG | + | chr5_2:63795667-63795686 | None:intergenic | 35.0% | |
| CGCTTATCATATAAGGGTTT+AGG | + | chr5_2:63795856-63795875 | None:intergenic | 35.0% | |
| GCATAAGCGCTTATCATATA+AGG | + | chr5_2:63795863-63795882 | None:intergenic | 35.0% | |
| GAACACTTACGCATCATATT+TGG | + | chr5_2:63795908-63795927 | None:intergenic | 35.0% | |
| !! | TGTTTATTGTTTGGCTTGCT+AGG | - | chr5_2:63796050-63796069 | Msa0781330:exon | 35.0% |
| CTTGCTAGGTGAACTAAATT+TGG | - | chr5_2:63796064-63796083 | Msa0781330:five_prime_UTR | 35.0% | |
| ! | AATTTGGTTCATGTGTTGCT+TGG | - | chr5_2:63796080-63796099 | Msa0781330:five_prime_UTR | 35.0% |
| AGTTGTTTGATGGAAAGGAA+GGG | - | chr5_2:63796221-63796240 | Msa0781330:intron | 35.0% | |
| ! | CAATGTTTTCTCTATGCAGT+TGG | - | chr5_2:63796419-63796438 | Msa0781330:intron | 35.0% |
| ! | GATTATCGATTATCGTAGCA+TGG | - | chr5_2:63796491-63796510 | Msa0781330:intron | 35.0% |
| TGAAACAATGCAGACACTAA+AGG | + | chr5_2:63796591-63796610 | None:intergenic | 35.0% | |
| GGTATGGTTAGTACAAGATG+AGG | + | chr5_2:63792987-63793006 | None:intergenic | 40.0% | |
| !! | GGATGGATTAATGTGAGGTA+TGG | + | chr5_2:63793003-63793022 | None:intergenic | 40.0% |
| ! | GAATTTAAGATGGGGAAGGA+TGG | + | chr5_2:63793020-63793039 | None:intergenic | 40.0% |
| ! | TGGAGAATTTAAGATGGGGA+AGG | + | chr5_2:63793024-63793043 | None:intergenic | 40.0% |
| TTACACTCTACCCCTAATTC+AGG | - | chr5_2:63793098-63793117 | Msa0781330:three_prime_UTR | 40.0% | |
| ! | CAGTGATTTGTGAAGTGTGT+TGG | - | chr5_2:63793517-63793536 | Msa0781330:intron | 40.0% |
| !! | AGTGTGTTGGTTACACTGTT+TGG | - | chr5_2:63793530-63793549 | Msa0781330:intron | 40.0% |
| ! | GTTACACTGTTTGGTGAAGT+GGG | - | chr5_2:63793539-63793558 | Msa0781330:intron | 40.0% |
| TTTGAAGATGAAGGTCACTG+TGG | - | chr5_2:63793573-63793592 | Msa0781330:intron | 40.0% | |
| GGAAGAGAGATTGTTAAAGG+TGG | - | chr5_2:63793607-63793626 | Msa0781330:intron | 40.0% | |
| ! | ACAATCGGTTTATTTGCCCA+AGG | + | chr5_2:63794075-63794094 | None:intergenic | 40.0% |
| ! | CAAACACATGCTTAGTGGAT+TGG | + | chr5_2:63794138-63794157 | None:intergenic | 40.0% |
| CAATCCACTAAGCATGTGTT+TGG | - | chr5_2:63794136-63794155 | Msa0781330:CDS | 40.0% | |
| TTTAAATGTGAGGTGGAGGT+AGG | + | chr5_2:63794173-63794192 | None:intergenic | 40.0% | |
| GACATTTAAATGTGAGGTGG+AGG | + | chr5_2:63794177-63794196 | None:intergenic | 40.0% | |
| ! | GGTGTTTGGAAATCCTTTTG+AGG | + | chr5_2:63794297-63794316 | None:intergenic | 40.0% |
| AGTCTACTTCATCTACAGAC+TGG | + | chr5_2:63794433-63794452 | None:intergenic | 40.0% | |
| GTATGTGTATGTCTGTCTCT+AGG | - | chr5_2:63794728-63794747 | Msa0781330:CDS | 40.0% | |
| GTCCTTGAACGTTACAGTTA+AGG | + | chr5_2:63794928-63794947 | None:intergenic | 40.0% | |
| ACTGTAACGTTCAAGGACTT+AGG | - | chr5_2:63794930-63794949 | Msa0781330:intron | 40.0% | |
| AAGACTGGATAGAGAAGCAA+CGG | + | chr5_2:63795002-63795021 | None:intergenic | 40.0% | |
| TACGAGTATTTCGGCTACAA+AGG | - | chr5_2:63795041-63795060 | Msa0781330:intron | 40.0% | |
| TTGCGGAAAACATTGGAAAG+GGG | + | chr5_2:63795179-63795198 | None:intergenic | 40.0% | |
| GTTGCGGAAAACATTGGAAA+GGG | + | chr5_2:63795180-63795199 | None:intergenic | 40.0% | |
| AGTTGCGGAAAACATTGGAA+AGG | + | chr5_2:63795181-63795200 | None:intergenic | 40.0% | |
| TCCAGTAATAAGCACAGTTG+CGG | + | chr5_2:63795196-63795215 | None:intergenic | 40.0% | |
| CATTTGAAGGTCACTTACAG+GGG | + | chr5_2:63795264-63795283 | None:intergenic | 40.0% | |
| TATTGAAGAGAAAGCCACGT+GGG | + | chr5_2:63795391-63795410 | None:intergenic | 40.0% | |
| ATATTGAAGAGAAAGCCACG+TGG | + | chr5_2:63795392-63795411 | None:intergenic | 40.0% | |
| AACAGAGATTTACCAGTGGT+TGG | - | chr5_2:63795433-63795452 | Msa0781330:intron | 40.0% | |
| ACAGAGATTTACCAGTGGTT+GGG | - | chr5_2:63795434-63795453 | Msa0781330:intron | 40.0% | |
| !! | CTGCTTTTATCATGACCAAC+TGG | - | chr5_2:63795507-63795526 | Msa0781330:intron | 40.0% |
| CAGTTGTTTGATGGAAAGGA+AGG | - | chr5_2:63796220-63796239 | Msa0781330:intron | 40.0% | |
| GATATTGCCTCCATTTCTGT+AGG | - | chr5_2:63796270-63796289 | Msa0781330:intron | 40.0% | |
| CTTCATAACCATCACTTCAG+TGG | + | chr5_2:63796304-63796323 | None:intergenic | 40.0% | |
| AACAATGCAGACACTAAAGG+AGG | + | chr5_2:63796588-63796607 | None:intergenic | 40.0% | |
| !! | GGGAAGGATGGATTAATGTG+AGG | + | chr5_2:63793008-63793027 | None:intergenic | 45.0% |
| ! | GGTTACACTGTTTGGTGAAG+TGG | - | chr5_2:63793538-63793557 | Msa0781330:intron | 45.0% |
| ! | TTGGTGAAGTGGGTGTGTTT+TGG | - | chr5_2:63793549-63793568 | Msa0781330:intron | 45.0% |
| TGAAGGTCACTGTGGTTTCT+AGG | - | chr5_2:63793581-63793600 | Msa0781330:intron | 45.0% | |
| AAATCTGCTACAGTAGCCTG+TGG | + | chr5_2:63793835-63793854 | None:intergenic | 45.0% | |
| TACTGTAGCAGATTTGCAGG+AGG | - | chr5_2:63793840-63793859 | Msa0781330:intron | 45.0% | |
| TCGGTTTATTTGCCCAAGGT+TGG | + | chr5_2:63794071-63794090 | None:intergenic | 45.0% | |
| GCTACCAAACACATGCTTAG+TGG | + | chr5_2:63794143-63794162 | None:intergenic | 45.0% | |
| !! | TAGCTTTGAGGTCCCTCAAA+AGG | - | chr5_2:63794281-63794300 | Msa0781330:CDS | 45.0% |
| ! | ACAGGCTTTTCCTTTGATCC+CGG | + | chr5_2:63794852-63794871 | None:intergenic | 45.0% |
| AGCGTACGGTAAGAAACTTG+TGG | + | chr5_2:63794957-63794976 | None:intergenic | 45.0% | |
| CGAAATACTCGTAGACAACG+GGG | + | chr5_2:63795034-63795053 | None:intergenic | 45.0% | |
| CCGAAATACTCGTAGACAAC+GGG | + | chr5_2:63795035-63795054 | None:intergenic | 45.0% | |
| CCCGTTGTCTACGAGTATTT+CGG | - | chr5_2:63795032-63795051 | Msa0781330:intron | 45.0% | |
| GCCGAAATACTCGTAGACAA+CGG | + | chr5_2:63795036-63795055 | None:intergenic | 45.0% | |
| ACATGGCATATGTCTGCACA+GGG | + | chr5_2:63795082-63795101 | None:intergenic | 45.0% | |
| TACATGGCATATGTCTGCAC+AGG | + | chr5_2:63795083-63795102 | None:intergenic | 45.0% | |
| CCAGAATTCGTTTGGCGTAA+TGG | + | chr5_2:63795118-63795137 | None:intergenic | 45.0% | |
| CCATTACGCCAAACGAATTC+TGG | - | chr5_2:63795115-63795134 | Msa0781330:intron | 45.0% | |
| AGCACAGTTGCGGAAAACAT+TGG | + | chr5_2:63795186-63795205 | None:intergenic | 45.0% | |
| TCCGCAACTGTGCTTATTAC+TGG | - | chr5_2:63795192-63795211 | Msa0781330:intron | 45.0% | |
| ! | TCACTTACAGGGGTGTATAG+GGG | + | chr5_2:63795254-63795273 | None:intergenic | 45.0% |
| ! | GTCACTTACAGGGGTGTATA+GGG | + | chr5_2:63795255-63795274 | None:intergenic | 45.0% |
| ATTGCAACGCAAACCATTGC+CGG | - | chr5_2:63795464-63795483 | Msa0781330:intron | 45.0% | |
| GGTCATGATAAAAGCAGCGA+CGG | + | chr5_2:63795504-63795523 | None:intergenic | 45.0% | |
| AAAACACAGGCGCTTGAAGA+AGG | - | chr5_2:63795538-63795557 | Msa0781330:intron | 45.0% | |
| GTGTACCTGCAGTTGTTTGA+TGG | - | chr5_2:63796211-63796230 | Msa0781330:intron | 45.0% | |
| CCTTTCCATCAAACAACTGC+AGG | + | chr5_2:63796219-63796238 | None:intergenic | 45.0% | |
| CCTGCAGTTGTTTGATGGAA+AGG | - | chr5_2:63796216-63796235 | Msa0781330:intron | 45.0% | |
| TGTTTGATGGAAAGGAAGGG+AGG | - | chr5_2:63796224-63796243 | Msa0781330:intron | 45.0% | |
| TAACCATCACTTCAGTGGCT+GGG | + | chr5_2:63796299-63796318 | None:intergenic | 45.0% | |
| ATAACCATCACTTCAGTGGC+TGG | + | chr5_2:63796300-63796319 | None:intergenic | 45.0% | |
| GGTTAGTACAAGATGAGGCC+AGG | + | chr5_2:63792982-63793001 | None:intergenic | 50.0% | |
| ! | GTCACTGTGGTTTCTAGGAG+TGG | - | chr5_2:63793586-63793605 | Msa0781330:intron | 50.0% |
| GGCTACTGTAGCAGATTTGC+AGG | - | chr5_2:63793837-63793856 | Msa0781330:intron | 50.0% | |
| ! | TGAGCTCAAGCGTAGCTTTG+AGG | - | chr5_2:63794269-63794288 | Msa0781330:CDS | 50.0% |
| ! | GGGACTTATGATGGGGTGTT+TGG | + | chr5_2:63794311-63794330 | None:intergenic | 50.0% |
| !! | CAGCCAAGAAGCATCCATCA+AGG | - | chr5_2:63794802-63794821 | Msa0781330:CDS | 50.0% |
| ! | CTGCCTTGATGGATGCTTCT+TGG | + | chr5_2:63794808-63794827 | None:intergenic | 50.0% |
| CTTGACACTTCCTGTCCAAC+CGG | - | chr5_2:63794830-63794849 | Msa0781330:intron | 50.0% | |
| TTGACACTTCCTGTCCAACC+GGG | - | chr5_2:63794831-63794850 | Msa0781330:intron | 50.0% | |
| ! | GCTTTTCCTTTGATCCCGGT+TGG | + | chr5_2:63794848-63794867 | None:intergenic | 50.0% |
| ACGGGGAAGTAGTAGAAGAC+TGG | + | chr5_2:63795017-63795036 | None:intergenic | 50.0% | |
| ! | TTACAGGGGTGTATAGGGGA+TGG | + | chr5_2:63795250-63795269 | None:intergenic | 50.0% |
| ! | GGTCACTTACAGGGGTGTAT+AGG | + | chr5_2:63795256-63795275 | None:intergenic | 50.0% |
| TGATATCCACCTTCTCCAGC+AGG | + | chr5_2:63795365-63795384 | None:intergenic | 50.0% | |
| GGTGGATATCAAATCCCACG+TGG | - | chr5_2:63795374-63795393 | Msa0781330:intron | 50.0% | |
| CAATGTTGAAGCCCAACCAC+TGG | + | chr5_2:63795448-63795467 | None:intergenic | 50.0% | |
| ! | GTGTTTTGCAAGAGCCCAGT+TGG | + | chr5_2:63795525-63795544 | None:intergenic | 50.0% |
| ACTGGGCTCTTGCAAAACAC+AGG | - | chr5_2:63795525-63795544 | Msa0781330:intron | 50.0% | |
| AACCATCACTTCAGTGGCTG+GGG | + | chr5_2:63796298-63796317 | None:intergenic | 50.0% | |
| TCAGAATCCTGTGAGCAGAG+TGG | + | chr5_2:63796330-63796349 | None:intergenic | 50.0% | |
| ! | AGTGTCAAGCGCTGCCTTGA+TGG | + | chr5_2:63794819-63794838 | None:intergenic | 55.0% |
| TCCTGTCCAACCGGGATCAA+AGG | - | chr5_2:63794839-63794858 | Msa0781330:intron | 55.0% | |
| TCCTTTGATCCCGGTTGGAC+AGG | + | chr5_2:63794843-63794862 | None:intergenic | 55.0% | |
| TGGCATATGTCTGCACAGGG+TGG | + | chr5_2:63795079-63795098 | None:intergenic | 55.0% | |
| TGGAAAGGGGCGAAGTTGCA+TGG | + | chr5_2:63795166-63795185 | None:intergenic | 55.0% | |
| AGGAATCTTCGTGGACCTGC+TGG | - | chr5_2:63795347-63795366 | Msa0781330:intron | 55.0% | |
| GCAATATCACCCACCGACGA+GGG | + | chr5_2:63796258-63796277 | None:intergenic | 55.0% | |
| TGGGGCTCCTACAGAAATGG+AGG | + | chr5_2:63796280-63796299 | None:intergenic | 55.0% | |
| GAAGTCACCACTCTGCTCAC+AGG | - | chr5_2:63796320-63796339 | Msa0781330:intron | 55.0% | |
| CTTCGTGGACCTGCTGGAGA+AGG | - | chr5_2:63795353-63795372 | Msa0781330:intron | 60.0% | |
| ATGGAAAGGAAGGGAGGCCG+AGG | - | chr5_2:63796230-63796249 | Msa0781330:intron | 60.0% | |
| GGCAATATCACCCACCGACG+AGG | + | chr5_2:63796259-63796278 | None:intergenic | 60.0% | |
| GGCTGGGGCTCCTACAGAAA+TGG | + | chr5_2:63796283-63796302 | None:intergenic | 60.0% | |
| AGCCCCAGCCACTGAAGTGA+TGG | - | chr5_2:63796293-63796312 | Msa0781330:intron | 60.0% | |
| CGTGGACCTGCTGGAGAAGG+TGG | - | chr5_2:63795356-63795375 | Msa0781330:intron | 65.0% | |
| !! | ACCCACCGACGAGGGTACCT+CGG | + | chr5_2:63796250-63796269 | None:intergenic | 65.0% |
| ! | GGAGGCCGAGGTACCCTCGT+CGG | - | chr5_2:63796242-63796261 | Msa0781330:intron | 70.0% |
| ! | GCCGAGGTACCCTCGTCGGT+GGG | - | chr5_2:63796246-63796265 | Msa0781330:intron | 70.0% |
| ! | GGCCGAGGTACCCTCGTCGG+TGG | - | chr5_2:63796245-63796264 | Msa0781330:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 63792943 | 63796690 | 63792943 | ID=Msa0781330;Name=Msa0781330 |
| chr5_2 | mRNA | 63792943 | 63796690 | 63792943 | ID=Msa0781330-mRNA-1;Parent=Msa0781330;Name=Msa0781330-mRNA-1;_AED=0.00;_eAED=0.00;_QI=274|1|1|1|0.75|0.6|5|399|310 |
| chr5_2 | exon | 63792943 | 63793410 | 63792943 | ID=Msa0781330-mRNA-1:exon:18985;Parent=Msa0781330-mRNA-1 |
| chr5_2 | exon | 63794074 | 63794828 | 63794074 | ID=Msa0781330-mRNA-1:exon:18984;Parent=Msa0781330-mRNA-1 |
| chr5_2 | exon | 63795756 | 63795795 | 63795756 | ID=Msa0781330-mRNA-1:exon:18983;Parent=Msa0781330-mRNA-1 |
| chr5_2 | exon | 63795985 | 63796150 | 63795985 | ID=Msa0781330-mRNA-1:exon:18982;Parent=Msa0781330-mRNA-1 |
| chr5_2 | exon | 63796514 | 63796690 | 63796514 | ID=Msa0781330-mRNA-1:exon:18981;Parent=Msa0781330-mRNA-1 |
| chr5_2 | five_prime_UTR | 63796514 | 63796690 | 63796514 | ID=Msa0781330-mRNA-1:five_prime_utr;Parent=Msa0781330-mRNA-1 |
| chr5_2 | five_prime_UTR | 63796054 | 63796150 | 63796054 | ID=Msa0781330-mRNA-1:five_prime_utr;Parent=Msa0781330-mRNA-1 |
| chr5_2 | CDS | 63795985 | 63796053 | 63795985 | ID=Msa0781330-mRNA-1:cds;Parent=Msa0781330-mRNA-1 |
| chr5_2 | CDS | 63795756 | 63795795 | 63795756 | ID=Msa0781330-mRNA-1:cds;Parent=Msa0781330-mRNA-1 |
| chr5_2 | CDS | 63794074 | 63794828 | 63794074 | ID=Msa0781330-mRNA-1:cds;Parent=Msa0781330-mRNA-1 |
| chr5_2 | CDS | 63793342 | 63793410 | 63793342 | ID=Msa0781330-mRNA-1:cds;Parent=Msa0781330-mRNA-1 |
| chr5_2 | three_prime_UTR | 63792943 | 63793341 | 63792943 | ID=Msa0781330-mRNA-1:three_prime_utr;Parent=Msa0781330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
