Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260120 | XP_013464699.2 | 65.094 | 106 | 22 | 4 | 467 | 570 | 553 | 645 | 1.24e-24 | 120 |
| Msa0260120 | XP_013464699.2 | 81.488 | 578 | 92 | 5 | 1 | 569 | 1 | 572 | 0.0 | 873 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260120 | sp|Q8GY87|UBC26_ARATH | 40.000 | 490 | 222 | 11 | 1 | 469 | 1 | 439 | 1.82e-94 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260120 | A0A396JCT9 | 65.094 | 106 | 22 | 4 | 467 | 570 | 553 | 645 | 5.94e-25 | 120 |
| Msa0260120 | A0A396JCT9 | 81.488 | 578 | 92 | 5 | 1 | 569 | 1 | 572 | 0.0 | 873 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0256290 | Msa0260120 | 0.995238 | 2.568984e-214 | -8.615850e-47 |
| Msa0260120 | Msa1039480 | 0.825842 | 3.759171e-54 | -8.615850e-47 |
| Msa0260120 | Msa1085590 | 0.826611 | 2.467581e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260120 | MtrunA17_Chr2g0317631 | 81.488 | 578 | 92 | 5 | 1 | 569 | 1 | 572 | 0.0 | 873 |
| Msa0260120 | MtrunA17_Chr2g0317631 | 65.094 | 106 | 22 | 4 | 467 | 570 | 553 | 645 | 1.14e-28 | 120 |
| Msa0260120 | MtrunA17_Chr1g0198021 | 78.715 | 249 | 53 | 0 | 221 | 469 | 55 | 303 | 2.93e-135 | 399 |
| Msa0260120 | MtrunA17_Chr8g0360171 | 51.948 | 385 | 152 | 6 | 118 | 470 | 285 | 668 | 8.75e-113 | 353 |
| Msa0260120 | MtrunA17_Chr8g0360171 | 41.916 | 167 | 82 | 3 | 1 | 152 | 42 | 208 | 2.68e-14 | 76.3 |
| Msa0260120 | MtrunA17_Chr7g0222941 | 70.500 | 200 | 59 | 0 | 247 | 446 | 34 | 233 | 1.82e-97 | 296 |
| Msa0260120 | MtrunA17_Chr8g0376201 | 52.920 | 274 | 112 | 3 | 198 | 469 | 100 | 358 | 1.38e-90 | 286 |
| Msa0260120 | MtrunA17_Chr2g0317611 | 78.049 | 164 | 36 | 0 | 221 | 384 | 11 | 174 | 3.89e-90 | 275 |
| Msa0260120 | MtrunA17_Chr4g0047301 | 59.799 | 199 | 77 | 2 | 274 | 469 | 639 | 837 | 1.56e-77 | 263 |
| Msa0260120 | MtrunA17_Chr2g0282211 | 58.883 | 197 | 79 | 1 | 274 | 468 | 650 | 846 | 1.09e-76 | 261 |
| Msa0260120 | MtrunA17_Chr2g0317641 | 82.394 | 142 | 23 | 1 | 330 | 469 | 1 | 142 | 2.82e-76 | 239 |
| Msa0260120 | MtrunA17_Chr1g0211131 | 51.210 | 248 | 101 | 4 | 235 | 469 | 748 | 988 | 1.99e-75 | 259 |
| Msa0260120 | MtrunA17_Chr7g0233611 | 56.566 | 198 | 80 | 3 | 276 | 469 | 7 | 202 | 6.23e-71 | 231 |
| Msa0260120 | MtrunA17_Chr8g0376111 | 57.653 | 196 | 79 | 2 | 277 | 469 | 13 | 207 | 2.58e-70 | 229 |
| Msa0260120 | MtrunA17_Chr4g0045101 | 53.571 | 196 | 87 | 2 | 277 | 469 | 7 | 201 | 5.18e-67 | 220 |
| Msa0260120 | MtrunA17_Chr7g0233631 | 53.571 | 196 | 87 | 2 | 277 | 469 | 8 | 202 | 1.92e-65 | 216 |
| Msa0260120 | MtrunA17_Chr2g0285321 | 60.140 | 143 | 52 | 3 | 330 | 469 | 1 | 141 | 4.73e-47 | 164 |
| Msa0260120 | MtrunA17_Chr4g0001491 | 35.316 | 269 | 104 | 6 | 262 | 470 | 39 | 297 | 1.38e-35 | 135 |
| Msa0260120 | MtrunA17_Chr2g0317621 | 71.642 | 67 | 19 | 0 | 403 | 469 | 23 | 89 | 4.77e-24 | 100 |
| Msa0260120 | MtrunA17_Chr3g0108261 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 2.40e-12 | 65.1 |
| Msa0260120 | MtrunA17_Chr5g0432831 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 2.70e-12 | 64.7 |
| Msa0260120 | MtrunA17_Chr4g0037011 | 31.707 | 123 | 74 | 3 | 303 | 425 | 3 | 115 | 2.94e-12 | 64.7 |
| Msa0260120 | MtrunA17_Chr7g0275361 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.81e-12 | 64.3 |
| Msa0260120 | MtrunA17_Chr8g0362321 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.49e-11 | 62.8 |
| Msa0260120 | MtrunA17_Chr1g0154011 | 30.081 | 123 | 76 | 3 | 303 | 425 | 3 | 115 | 1.59e-11 | 62.4 |
| Msa0260120 | MtrunA17_Chr4g0060351 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 2.32e-11 | 62.4 |
| Msa0260120 | MtrunA17_Chr8g0369311 | 30.081 | 123 | 76 | 3 | 303 | 425 | 59 | 171 | 7.62e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260120 | AT1G53025.1 | 40.000 | 490 | 222 | 11 | 1 | 469 | 1 | 439 | 1.85e-95 | 302 |
| Msa0260120 | AT1G53025.2 | 40.000 | 490 | 222 | 11 | 1 | 469 | 1 | 439 | 3.35e-95 | 301 |
| Msa0260120 | AT3G15355.1 | 37.288 | 531 | 240 | 13 | 1 | 469 | 1 | 500 | 2.07e-91 | 293 |
| Msa0260120 | AT1G53023.1 | 61.307 | 199 | 68 | 1 | 271 | 460 | 18 | 216 | 3.11e-82 | 260 |
| Msa0260120 | AT2G16920.1 | 57.868 | 197 | 82 | 1 | 273 | 469 | 823 | 1018 | 3.31e-72 | 251 |
| Msa0260120 | AT2G16920.2 | 57.868 | 197 | 82 | 1 | 273 | 469 | 823 | 1018 | 3.31e-72 | 251 |
| Msa0260120 | AT2G33770.1 | 55.340 | 206 | 90 | 1 | 266 | 469 | 625 | 830 | 1.38e-70 | 244 |
| Msa0260120 | AT4G27960.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.07e-12 | 65.1 |
| Msa0260120 | AT1G64230.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.72e-12 | 64.7 |
| Msa0260120 | AT1G64230.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.72e-12 | 64.7 |
| Msa0260120 | AT5G53300.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 4.14e-12 | 64.7 |
| Msa0260120 | AT5G53300.4 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 4.14e-12 | 64.7 |
| Msa0260120 | AT5G53300.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 4.14e-12 | 64.7 |
| Msa0260120 | AT5G41700.4 | 32.258 | 124 | 73 | 4 | 303 | 425 | 3 | 116 | 5.18e-12 | 64.3 |
| Msa0260120 | AT5G41700.5 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 5.69e-12 | 64.3 |
| Msa0260120 | AT5G41700.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 5.69e-12 | 64.3 |
| Msa0260120 | AT5G41700.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 5.69e-12 | 64.3 |
| Msa0260120 | AT3G08690.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 9.95e-12 | 63.5 |
| Msa0260120 | AT3G08690.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 9.95e-12 | 63.5 |
| Msa0260120 | AT1G14400.1 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.08e-11 | 63.5 |
| Msa0260120 | AT1G14400.2 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.08e-11 | 63.5 |
| Msa0260120 | AT2G02760.1 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0260120 | AT2G02760.2 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0260120 | AT2G02760.4 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0260120 | AT2G02760.3 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0260120 | AT4G27960.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 33 | 145 | 4.14e-11 | 62.4 |
| Msa0260120 | AT5G56150.1 | 29.268 | 123 | 77 | 3 | 303 | 425 | 3 | 115 | 8.21e-11 | 60.8 |
Find 155 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGATGAAGCTGCCATATT+TGG | 0.122740 | 2_2:-57617474 | Msa0260120:CDS |
| TTGCCACAATTATACAAATT+TGG | 0.162066 | 2_2:+57616352 | None:intergenic |
| CCAGGAAGAGTGGAAGATTT+TGG | 0.234251 | 2_2:-57616989 | Msa0260120:CDS |
| CATCCTCTGGGCATAGAATT+AGG | 0.261535 | 2_2:-57617380 | Msa0260120:CDS |
| GATGATGATTTAATGATAAT+TGG | 0.268682 | 2_2:-57617973 | Msa0260120:CDS |
| CCAAAATCTTCCACTCTTCC+TGG | 0.274799 | 2_2:+57616989 | None:intergenic |
| GCTTTACCTTGGAAAGGTTT+TGG | 0.300215 | 2_2:+57617548 | None:intergenic |
| CTCATGAGAGCTGTGATTAT+TGG | 0.300913 | 2_2:-57616586 | Msa0260120:CDS |
| CTTTCAAATTGCCCCAAATA+TGG | 0.305553 | 2_2:+57617461 | None:intergenic |
| CATATGAAGGTAGTCATTAT+TGG | 0.311282 | 2_2:+57617673 | None:intergenic |
| GCGATGAAGCTGCCATATTT+GGG | 0.333638 | 2_2:-57617473 | Msa0260120:CDS |
| CACTCACTCTTTCGCTCAAA+AGG | 0.363102 | 2_2:-57619179 | Msa0260120:five_prime_UTR |
| GCCACTCCTGAGCCCTTGTT+TGG | 0.365425 | 2_2:-57617323 | Msa0260120:CDS |
| CAATGGATCATCGCATCCTC+TGG | 0.376275 | 2_2:-57617393 | Msa0260120:CDS |
| AGACGAGTACGCTTTATTAC+AGG | 0.389106 | 2_2:-57617627 | Msa0260120:CDS |
| AATGTTGAGGGCCAAGGTTC+TGG | 0.399244 | 2_2:-57617707 | Msa0260120:CDS |
| TGCTCCATCACGTCCAGCTC+TGG | 0.400168 | 2_2:+57617277 | None:intergenic |
| TATGGCAGCTTCATCGCATC+TGG | 0.404869 | 2_2:+57617479 | None:intergenic |
| AATAAATCGTAAACGTCATA+AGG | 0.405788 | 2_2:-57617947 | Msa0260120:CDS |
| TCATTCCATTCAAATTTCAA+TGG | 0.409772 | 2_2:-57617410 | Msa0260120:CDS |
| AAGCACCGGAGTCTGAAAAT+TGG | 0.411077 | 2_2:+57615361 | None:intergenic |
| ATAAATCGTAAACGTCATAA+GGG | 0.421260 | 2_2:-57617946 | Msa0260120:CDS |
| GCACCGGAGGGTTGAAGCAC+CGG | 0.423314 | 2_2:+57615347 | None:intergenic |
| CATGTACAACCTTCCTCTCT+CGG | 0.435959 | 2_2:-57615324 | Msa0260120:CDS |
| TAAAACTTCGAAGTTTCCTC+AGG | 0.441133 | 2_2:+57617204 | None:intergenic |
| ATTCAAGATTAGCCCTTGTA+TGG | 0.445082 | 2_2:+57616240 | None:intergenic |
| AAGAAGACTTTGCTTTACCT+TGG | 0.447028 | 2_2:+57617537 | None:intergenic |
| AGGAGTCTGAATCTGAAGAT+TGG | 0.451607 | 2_2:+57615412 | None:intergenic |
| AGGAGTCTGAATCTGAAGAT+TGG | 0.451607 | 2_2:+57615463 | None:intergenic |
| AGGAGTCTGAATCTGAAGAT+TGG | 0.451607 | 2_2:+57615505 | None:intergenic |
| ATGATCCATTGAAATTTGAA+TGG | 0.452022 | 2_2:+57617405 | None:intergenic |
| GGAGCAGCTGTGGTTCCCTC+AGG | 0.453305 | 2_2:-57617260 | Msa0260120:CDS |
| CAGGTTCTAGTCTCCATACA+AGG | 0.456836 | 2_2:-57616253 | Msa0260120:CDS |
| AAATAATTGCTCCGTGAAGC+AGG | 0.460402 | 2_2:-57617135 | Msa0260120:intron |
| TTATGAGAACTCTTAAACCA+TGG | 0.462203 | 2_2:+57617353 | None:intergenic |
| TTGTGAGAATCTTCGAATCA+AGG | 0.463581 | 2_2:-57616615 | Msa0260120:CDS |
| AATCCAAATTTGTATAATTG+TGG | 0.465186 | 2_2:-57616355 | Msa0260120:CDS |
| GCAATTTGAAAGTGCTAAGA+AGG | 0.469287 | 2_2:-57617450 | Msa0260120:CDS |
| GGTGTGTCTTGGTGAATTGG+AGG | 0.470137 | 2_2:+57619099 | None:intergenic |
| CTGATTCTTGTCGCCAGACC+AGG | 0.476720 | 2_2:+57616306 | None:intergenic |
| GGTCTCAAATCTGCCAGAGC+TGG | 0.481148 | 2_2:-57617290 | Msa0260120:CDS |
| AGGTGTTTCGACAATGCTAC+AGG | 0.482283 | 2_2:-57616272 | Msa0260120:CDS |
| CCACTCAAAGATGCATATCC+AGG | 0.482310 | 2_2:+57616196 | None:intergenic |
| GGAGGAATTTCAACAACGTC+AGG | 0.492026 | 2_2:+57619120 | None:intergenic |
| TCAATTACATCATGGACAAT+GGG | 0.493272 | 2_2:+57618018 | None:intergenic |
| CATCTTTGAGTGGCTCATCA+AGG | 0.498412 | 2_2:-57616186 | Msa0260120:CDS |
| ATCACCGTAACCCTCATGAA+TGG | 0.498420 | 2_2:+57617909 | None:intergenic |
| TCTGAAGATTGGAGGGATGA+AGG | 0.499059 | 2_2:+57615516 | None:intergenic |
| CATTCAAAAGGAAGAAGAAA+CGG | 0.506292 | 2_2:-57619074 | Msa0260120:CDS |
| GTCAATTACATCATGGACAA+TGG | 0.508003 | 2_2:+57618017 | None:intergenic |
| GAAACCATTCATGAGGGTTA+CGG | 0.510761 | 2_2:-57617913 | Msa0260120:CDS |
| GACTTTGCTTTACCTTGGAA+AGG | 0.512989 | 2_2:+57617542 | None:intergenic |
| ACTCCGGTGCTTCAACCCTC+CGG | 0.515511 | 2_2:-57615350 | Msa0260120:CDS |
| CTAAGCAGAATCCAAAGAGC+TGG | 0.518907 | 2_2:-57617023 | Msa0260120:intron |
| ATGTACAACCTTCCTCTCTC+GGG | 0.519390 | 2_2:-57615323 | Msa0260120:CDS |
| AAGCCTTGCTTCAATGAACC+TGG | 0.524390 | 2_2:-57616214 | Msa0260120:CDS |
| AGTCTACTTAACACCTGGTC+TGG | 0.527101 | 2_2:-57616319 | Msa0260120:CDS |
| CCAACGATGGACCAGAACCT+TGG | 0.528662 | 2_2:+57617696 | None:intergenic |
| CATAACTCAATCAATGTTGA+GGG | 0.528984 | 2_2:-57617719 | Msa0260120:CDS |
| ATCTTTGAGTGGCTCATCAA+GGG | 0.529420 | 2_2:-57616185 | Msa0260120:CDS |
| TCTGGCAGATTTGAGACCAC+TGG | 0.529572 | 2_2:+57617295 | None:intergenic |
| TCAATCAATGTTGAGGGCCA+AGG | 0.529983 | 2_2:-57617713 | Msa0260120:CDS |
| ATTCAAAAGGAAGAAGAAAC+GGG | 0.530200 | 2_2:-57619073 | Msa0260120:intron |
| ATGCGAGTTGTACACAGTAC+TGG | 0.530792 | 2_2:+57615277 | None:intergenic |
| AGTCTGAATCTGAAGATTGG+AGG | 0.540644 | 2_2:+57615466 | None:intergenic |
| TATGAGAACTCTTAAACCAT+GGG | 0.540675 | 2_2:+57617354 | None:intergenic |
| ACCACTGGATTCACCAAACA+AGG | 0.540988 | 2_2:+57617310 | None:intergenic |
| AGTCTGAATCTGAAGATTGG+AGG | 0.542135 | 2_2:+57615415 | None:intergenic |
| AGTCTGAATCTGAAGATTGG+AGG | 0.542135 | 2_2:+57615508 | None:intergenic |
| GATGACCTACAGAGTGGTAG+TGG | 0.542499 | 2_2:+57616383 | None:intergenic |
| ACAGGCACAATTTGATAATG+TGG | 0.542504 | 2_2:-57617609 | Msa0260120:CDS |
| GTGTCTTGGTGAATTGGAGG+AGG | 0.544036 | 2_2:+57619102 | None:intergenic |
| TCTGCCAGAGCTGGACGTGA+TGG | 0.544561 | 2_2:-57617281 | Msa0260120:CDS |
| GACTCCTCAGATTCAGACTC+AGG | 0.544630 | 2_2:-57615396 | Msa0260120:CDS |
| AATTATCTGAAAACATATGA+AGG | 0.547544 | 2_2:+57617660 | None:intergenic |
| AAGAATCAGATGTGGACTCC+AGG | 0.548347 | 2_2:-57616292 | Msa0260120:CDS |
| GAAAGTGCTAAGAAGGGAGC+TGG | 0.548826 | 2_2:-57617443 | Msa0260120:CDS |
| AAGAAAAGACCATCATGGTA+AGG | 0.550564 | 2_2:+57616550 | None:intergenic |
| GAGTAGAACCAAACCTTAGG+AGG | 0.550750 | 2_2:+57616085 | None:intergenic |
| TTACGGTGATCAACAAATTG+TGG | 0.551864 | 2_2:-57617896 | Msa0260120:intron |
| GACTCCTCAGATTCAGACTC+CGG | 0.553608 | 2_2:-57615447 | Msa0260120:CDS |
| CACCGGAGTCTGAAAATTGG+AGG | 0.553786 | 2_2:+57615364 | None:intergenic |
| CGTCAATGTCAATTACATCA+TGG | 0.554105 | 2_2:+57618010 | None:intergenic |
| TGTAGCATTGTCGAAACACC+TGG | 0.555413 | 2_2:+57616274 | None:intergenic |
| CCAAGGTTCTGGTCCATCGT+TGG | 0.555974 | 2_2:-57617696 | Msa0260120:CDS |
| GTCTGAATCTGAAGATTGGA+GGG | 0.557648 | 2_2:+57615416 | None:intergenic |
| GTCTGAATCTGAAGATTGGA+GGG | 0.557648 | 2_2:+57615509 | None:intergenic |
| GATTCACCAAACAAGGGCTC+AGG | 0.561525 | 2_2:+57617317 | None:intergenic |
| AGTGGCTCATCAAGGGGTGA+AGG | 0.561664 | 2_2:-57616178 | Msa0260120:CDS |
| AGATTGGAGGGATGAAGCAC+CGG | 0.561933 | 2_2:+57615428 | None:intergenic |
| ACATAACTCAATCAATGTTG+AGG | 0.562622 | 2_2:-57617720 | Msa0260120:CDS |
| GGGGTACATTGGGATATTCA+GGG | 0.565638 | 2_2:+57616509 | None:intergenic |
| TGTGATAAGAAATCCTCCTA+AGG | 0.566453 | 2_2:-57616098 | Msa0260120:intron |
| AGATTGGAGGGATGAAGGAC+CGG | 0.567786 | 2_2:+57615521 | None:intergenic |
| CGAGAGAGGAAGGTTGTACA+TGG | 0.570213 | 2_2:+57615325 | None:intergenic |
| GGCACTTGAAACCATTCATG+AGG | 0.577150 | 2_2:-57617920 | Msa0260120:CDS |
| AGGAAGGTTGTACATGGCAC+CGG | 0.577844 | 2_2:+57615331 | None:intergenic |
| GAGGAATGAAACTGAATCTG+AGG | 0.579337 | 2_2:+57615485 | None:intergenic |
| GCTGTGATTATTGGAGCAGA+AGG | 0.581801 | 2_2:-57616577 | Msa0260120:CDS |
| TTGTTGCCAAAACCTTTCCA+AGG | 0.583357 | 2_2:-57617554 | Msa0260120:CDS |
| AATGGATCATCGCATCCTCT+GGG | 0.584712 | 2_2:-57617392 | Msa0260120:CDS |
| TGAGTGATTGTAAAACCTGA+GGG | 0.587825 | 2_2:+57617245 | None:intergenic |
| GGGTACATTGGGATATTCAG+GGG | 0.590135 | 2_2:+57616510 | None:intergenic |
| GCCTCAGTCTACTTAACACC+TGG | 0.593269 | 2_2:-57616324 | Msa0260120:CDS |
| AGCACCTGAGTCTGAATCTG+AGG | 0.596002 | 2_2:+57615392 | None:intergenic |
| GGATCTACCGACTGGAATTG+AGG | 0.596034 | 2_2:-57617588 | Msa0260120:CDS |
| TGAATATCCCAATGTACCCC+CGG | 0.596754 | 2_2:-57616506 | Msa0260120:intron |
| TAAGCAGAATCCAAAGAGCT+GGG | 0.598645 | 2_2:-57617022 | Msa0260120:intron |
| GAGAATCTTCGAATCAAGGA+TGG | 0.598664 | 2_2:-57616611 | Msa0260120:CDS |
| GTGGCTCATCAAGGGGTGAA+GGG | 0.599339 | 2_2:-57616177 | Msa0260120:CDS |
| ACACGGCACCCGAGAGAGGA+AGG | 0.599897 | 2_2:+57615315 | None:intergenic |
| ACTACCACTCTGTAGGTCAT+CGG | 0.600894 | 2_2:-57616381 | Msa0260120:CDS |
| GATAATGTGGATCTACCGAC+TGG | 0.601717 | 2_2:-57617596 | Msa0260120:CDS |
| AAGGTTGTACATGGCACCGG+AGG | 0.603096 | 2_2:+57615334 | None:intergenic |
| GGTACATTGGGATATTCAGG+GGG | 0.603319 | 2_2:+57616511 | None:intergenic |
| GAAGGGACTCCTTACCATGA+TGG | 0.604625 | 2_2:-57616559 | Msa0260120:CDS |
| CATAACTACATGAGTGGTCA+AGG | 0.605574 | 2_2:-57615257 | Msa0260120:CDS |
| AAAACTTCGAAGTTTCCTCA+GGG | 0.608416 | 2_2:+57617205 | None:intergenic |
| ACACAGTACTGGAGGGAGGA+AGG | 0.614983 | 2_2:+57615288 | None:intergenic |
| ACCAAACAAGGGCTCAGGAG+TGG | 0.615387 | 2_2:+57617322 | None:intergenic |
| ACCGGAGTCTGAAAATTGGA+GGG | 0.618951 | 2_2:+57615365 | None:intergenic |
| CCTGGATATGCATCTTTGAG+TGG | 0.618959 | 2_2:-57616196 | Msa0260120:CDS |
| TGGACGTGATGGAGCAGCTG+TGG | 0.619742 | 2_2:-57617270 | Msa0260120:CDS |
| GCATAGAATTAGGAAACCCA+TGG | 0.619918 | 2_2:-57617370 | Msa0260120:CDS |
| TATCCAGGTTCATTGAAGCA+AGG | 0.620198 | 2_2:+57616211 | None:intergenic |
| CTGTGATTATTGGAGCAGAA+GGG | 0.626963 | 2_2:-57616576 | Msa0260120:CDS |
| AGCACCGGAGTCTGAATCTG+AGG | 0.626973 | 2_2:+57615443 | None:intergenic |
| ATGAGTGATTGTAAAACCTG+AGG | 0.627004 | 2_2:+57617244 | None:intergenic |
| TTGTACACGGCACCCGAGAG+AGG | 0.627050 | 2_2:+57615311 | None:intergenic |
| TCGTAAACGTCATAAGGGGA+AGG | 0.627456 | 2_2:-57617941 | Msa0260120:CDS |
| AAAGTCCACTACCACTCTGT+AGG | 0.627992 | 2_2:-57616388 | Msa0260120:CDS |
| CGATGAAGCTGCCATATTTG+GGG | 0.631883 | 2_2:-57617472 | Msa0260120:CDS |
| ATTGAGTTATGTGATACTGA+AGG | 0.632211 | 2_2:+57617731 | None:intergenic |
| TTGAGCGAAAGAGTGAGTGA+AGG | 0.633504 | 2_2:+57619183 | None:intergenic |
| CGAGTTGTACACAGTACTGG+AGG | 0.638371 | 2_2:+57615280 | None:intergenic |
| CCCTTGTTTGGTGAATCCAG+TGG | 0.638792 | 2_2:-57617311 | Msa0260120:CDS |
| TAGTCATTATTGGCCAACGA+TGG | 0.639198 | 2_2:+57617683 | None:intergenic |
| AACTCGCATAACTACATGAG+TGG | 0.640238 | 2_2:-57615263 | Msa0260120:CDS |
| TAAATCGTAAACGTCATAAG+GGG | 0.643914 | 2_2:-57617945 | Msa0260120:CDS |
| TCTTTGAGTGGCTCATCAAG+GGG | 0.648614 | 2_2:-57616184 | Msa0260120:CDS |
| GCACTTGAAACCATTCATGA+GGG | 0.658315 | 2_2:-57617919 | Msa0260120:CDS |
| ATACATTCATTCTTTCAGTG+AGG | 0.659487 | 2_2:-57616132 | Msa0260120:CDS |
| CTGGCGACAAGAATCAGATG+TGG | 0.660040 | 2_2:-57616300 | Msa0260120:CDS |
| AGGTTGTACATGGCACCGGA+GGG | 0.668663 | 2_2:+57615335 | None:intergenic |
| CAATTTGAAAGTGCTAAGAA+GGG | 0.678255 | 2_2:-57617449 | Msa0260120:CDS |
| GGAGGGAGGAAGGTTGTACA+CGG | 0.684181 | 2_2:+57615298 | None:intergenic |
| AGGTTCTAGTCTCCATACAA+GGG | 0.698032 | 2_2:-57616252 | Msa0260120:CDS |
| ACCAGGTGTTAAGTAGACTG+AGG | 0.707733 | 2_2:+57616323 | None:intergenic |
| TTTCCTAATTCTATGCCCAG+AGG | 0.709280 | 2_2:+57617377 | None:intergenic |
| TTGTACACAGTACTGGAGGG+AGG | 0.713040 | 2_2:+57615284 | None:intergenic |
| GAGTTGTACACAGTACTGGA+GGG | 0.714547 | 2_2:+57615281 | None:intergenic |
| AAAGGCGCCTCAATTCCAGT+CGG | 0.718101 | 2_2:+57617581 | None:intergenic |
| AACCCGAAAATGAAACCCTG+AGG | 0.725477 | 2_2:-57617220 | Msa0260120:CDS |
| CCACTGGATTCACCAAACAA+GGG | 0.727648 | 2_2:+57617311 | None:intergenic |
| TAAGCCGATGACCTACAGAG+TGG | 0.764427 | 2_2:+57616377 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTAAATTCTTAATCA+TGG | - | chr2_2:57615541-57615560 | Msa0260120:intron | 10.0% |
| !! | TTTATTAAATTCTTAATCAT+GGG | - | chr2_2:57615542-57615561 | Msa0260120:intron | 10.0% |
| !!! | TTTAGTATTCAATTTAATTT+TGG | - | chr2_2:57617553-57617572 | Msa0260120:CDS | 10.0% |
| !! | TATAAAATAAATGAAGCTTA+TGG | + | chr2_2:57616338-57616357 | None:intergenic | 15.0% |
| !!! | TATGTTTTCAGATAATTATA+TGG | - | chr2_2:57616786-57616805 | Msa0260120:intron | 15.0% |
| !! | AAAGAAAAAAATCAAAGAAA+TGG | + | chr2_2:57617784-57617803 | None:intergenic | 15.0% |
| !! | ATTGAAAAGTTTGATTGAAT+AGG | + | chr2_2:57615410-57615429 | None:intergenic | 20.0% |
| !!! | TTTTTTATTAAGTTCTTGTG+TGG | - | chr2_2:57615448-57615467 | Msa0260120:CDS | 20.0% |
| !!! | TTTTTATTAAGTTCTTGTGT+GGG | - | chr2_2:57615449-57615468 | Msa0260120:CDS | 20.0% |
| !! | AACAACAAAAATAATGATCA+TGG | + | chr2_2:57615665-57615684 | None:intergenic | 20.0% |
| !! | TTATATTGTGAGAATATGAA+TGG | - | chr2_2:57615771-57615790 | Msa0260120:intron | 20.0% |
| !!! | TGGTTTTAAATATGATTTAG+AGG | - | chr2_2:57615791-57615810 | Msa0260120:intron | 20.0% |
| !! | AACAAACGATTATTATTTGT+TGG | + | chr2_2:57616392-57616411 | None:intergenic | 20.0% |
| !! | GATGATGATTTAATGATAAT+TGG | - | chr2_2:57616467-57616486 | Msa0260120:intron | 20.0% |
| !!! | ATGATATAGTCATTTAAAGT+TGG | + | chr2_2:57616587-57616606 | None:intergenic | 20.0% |
| !! | AATTATCTGAAAACATATGA+AGG | + | chr2_2:57616783-57616802 | None:intergenic | 20.0% |
| !!! | CAGTTCTAATCTTAATTATA+TGG | - | chr2_2:57617374-57617393 | Msa0260120:CDS | 20.0% |
| !! | TTTAATTCAATTCTGACAAA+TGG | - | chr2_2:57618009-57618028 | Msa0260120:CDS | 20.0% |
| !! | TTAATTCAATTCTGACAAAT+GGG | - | chr2_2:57618010-57618029 | Msa0260120:CDS | 20.0% |
| !! | AATCCAAATTTGTATAATTG+TGG | - | chr2_2:57618085-57618104 | Msa0260120:intron | 20.0% |
| !!! | GGAAAAAGATTTTAAATACT+TGG | + | chr2_2:57618532-57618551 | None:intergenic | 20.0% |
| !! | TTTTGTTCCTTTTTTCTTGT+TGG | - | chr2_2:57615490-57615509 | Msa0260120:CDS | 25.0% |
| !!! | TTTGTTCCTTTTTTCTTGTT+GGG | - | chr2_2:57615491-57615510 | Msa0260120:CDS | 25.0% |
| ! | AACTACATAATTCGAGATTA+AGG | + | chr2_2:57615735-57615754 | None:intergenic | 25.0% |
| !!! | TTATGTAGTTGTTTCTTCTT+AGG | - | chr2_2:57615745-57615764 | Msa0260120:intron | 25.0% |
| !!! | ATTGCCAAGGTTTTAAATTA+CGG | + | chr2_2:57615910-57615929 | None:intergenic | 25.0% |
| ! | TGTTGATATGTATGATTTAG+AGG | - | chr2_2:57615965-57615984 | Msa0260120:intron | 25.0% |
| ! | GTTGATATGTATGATTTAGA+GGG | - | chr2_2:57615966-57615985 | Msa0260120:intron | 25.0% |
| ! | AAATTAAACTCTATGGGAAA+TGG | + | chr2_2:57616111-57616130 | None:intergenic | 25.0% |
| !!! | TTTCCCATAGAGTTTAATTT+TGG | - | chr2_2:57616111-57616130 | Msa0260120:CDS | 25.0% |
| ! | GTACCAAAATTAAACTCTAT+GGG | + | chr2_2:57616117-57616136 | None:intergenic | 25.0% |
| ! | TGTACCAAAATTAAACTCTA+TGG | + | chr2_2:57616118-57616137 | None:intergenic | 25.0% |
| ! | ACCAAAACAAAAACAATCAA+TGG | + | chr2_2:57616209-57616228 | None:intergenic | 25.0% |
| ! | ATTTGCTTCATTACAACAAA+GGG | + | chr2_2:57616273-57616292 | None:intergenic | 25.0% |
| !! | AAATGGTACCTTTAGAAATT+AGG | - | chr2_2:57616289-57616308 | Msa0260120:CDS | 25.0% |
| !! | AATGGTACCTTTAGAAATTA+GGG | - | chr2_2:57616290-57616309 | Msa0260120:CDS | 25.0% |
| ! | TAATTTCCCCTAATTTCTAA+AGG | + | chr2_2:57616300-57616319 | None:intergenic | 25.0% |
| ! | TTTAGAAATTAGGGGAAATT+AGG | - | chr2_2:57616299-57616318 | Msa0260120:CDS | 25.0% |
| ! | TTAGAAATTAGGGGAAATTA+GGG | - | chr2_2:57616300-57616319 | Msa0260120:CDS | 25.0% |
| ! | AAAGAAAAAGATAAGACTCT+TGG | + | chr2_2:57616368-57616387 | None:intergenic | 25.0% |
| ! | AATAAATCGTAAACGTCATA+AGG | - | chr2_2:57616493-57616512 | Msa0260120:intron | 25.0% |
| ! | ATAAATCGTAAACGTCATAA+GGG | - | chr2_2:57616494-57616513 | Msa0260120:intron | 25.0% |
| !!! | AAAGCAAAGTCTTCTTTTTT+TGG | - | chr2_2:57616910-57616929 | Msa0260120:intron | 25.0% |
| !!! | TTTTTTTGGCTCAAAAAAAC+AGG | - | chr2_2:57616924-57616943 | Msa0260120:intron | 25.0% |
| ! | TCATTCCATTCAAATTTCAA+TGG | - | chr2_2:57617030-57617049 | Msa0260120:intron | 25.0% |
| ! | ATGATCCATTGAAATTTGAA+TGG | + | chr2_2:57617038-57617057 | None:intergenic | 25.0% |
| ! | ATTACAAGCTATTTAGTATC+AGG | + | chr2_2:57617506-57617525 | None:intergenic | 25.0% |
| ! | CCAATTTCAGAACAAATATA+TGG | + | chr2_2:57617701-57617720 | None:intergenic | 25.0% |
| !!! | CCATATATTTGTTCTGAAAT+TGG | - | chr2_2:57617698-57617717 | Msa0260120:CDS | 25.0% |
| ! | TTGCCACAATTATACAAATT+TGG | + | chr2_2:57618091-57618110 | None:intergenic | 25.0% |
| !! | AGATTTTAAATACTTGGCAA+TGG | + | chr2_2:57618526-57618545 | None:intergenic | 25.0% |
| !! | TTAAAATCTTTTTCCTCTCT+TGG | - | chr2_2:57618537-57618556 | Msa0260120:intron | 25.0% |
| !! | TAAAATCTTTTTCCTCTCTT+GGG | - | chr2_2:57618538-57618557 | Msa0260120:intron | 25.0% |
| !!! | CAACTGATTTAGGTAATTTT+TGG | - | chr2_2:57618568-57618587 | Msa0260120:intron | 25.0% |
| ! | TTGGTTGTTTGGTAAAAAAA+GGG | - | chr2_2:57618686-57618705 | Msa0260120:intron | 25.0% |
| ! | AACATTGTTAATGAGAGTAA+AGG | - | chr2_2:57618712-57618731 | Msa0260120:intron | 25.0% |
| ! | ATCAAAGAGTTTGAAAGAAT+TGG | - | chr2_2:57618787-57618806 | Msa0260120:intron | 25.0% |
| ! | TTTCTTCTTCCTTTTGAATG+GGG | + | chr2_2:57615366-57615385 | None:intergenic | 30.0% |
| ! | GTTTCTTCTTCCTTTTGAAT+GGG | + | chr2_2:57615367-57615386 | None:intergenic | 30.0% |
| CATTCAAAAGGAAGAAGAAA+CGG | - | chr2_2:57615366-57615385 | Msa0260120:CDS | 30.0% | |
| ATTCAAAAGGAAGAAGAAAC+GGG | - | chr2_2:57615367-57615386 | Msa0260120:CDS | 30.0% | |
| GATTGAATAGGAGAATAGAT+AGG | + | chr2_2:57615398-57615417 | None:intergenic | 30.0% | |
| AGAGTCATAAATAACGATCA+TGG | + | chr2_2:57615582-57615601 | None:intergenic | 30.0% | |
| ATGATCGTTATTTATGACTC+TGG | - | chr2_2:57615581-57615600 | Msa0260120:intron | 30.0% | |
| CAAAACTTCAAAGCAGAAAT+TGG | + | chr2_2:57615611-57615630 | None:intergenic | 30.0% | |
| ! | ATTTAAAACCTTGGCAATGT+TGG | - | chr2_2:57615912-57615931 | Msa0260120:intron | 30.0% |
| ! | TTTAAAACCTTGGCAATGTT+GGG | - | chr2_2:57615913-57615932 | Msa0260120:intron | 30.0% |
| TAGTTACACTTTCAGACATA+TGG | - | chr2_2:57616156-57616175 | Msa0260120:CDS | 30.0% | |
| !!! | GCCATTGATTGTTTTTGTTT+TGG | - | chr2_2:57616205-57616224 | Msa0260120:CDS | 30.0% |
| !!! | TGTTTTGGTTTTCGAAATAG+AGG | - | chr2_2:57616220-57616239 | Msa0260120:CDS | 30.0% |
| !!! | GTTTTGGTTTTCGAAATAGA+GGG | - | chr2_2:57616221-57616240 | Msa0260120:CDS | 30.0% |
| !!! | TTTTGGTTTTCGAAATAGAG+GGG | - | chr2_2:57616222-57616241 | Msa0260120:CDS | 30.0% |
| ATTGTTTAAAGAGGTTCCTT+CGG | - | chr2_2:57616245-57616264 | Msa0260120:CDS | 30.0% | |
| CATTTGCTTCATTACAACAA+AGG | + | chr2_2:57616274-57616293 | None:intergenic | 30.0% | |
| ! | CTTTGTTGTAATGAAGCAAA+TGG | - | chr2_2:57616272-57616291 | Msa0260120:CDS | 30.0% |
| ! | ATGGTACCTTTAGAAATTAG+GGG | - | chr2_2:57616291-57616310 | Msa0260120:CDS | 30.0% |
| TAGAAATTAGGGGAAATTAG+GGG | - | chr2_2:57616301-57616320 | Msa0260120:CDS | 30.0% | |
| TCAATTACATCATGGACAAT+GGG | + | chr2_2:57616425-57616444 | None:intergenic | 30.0% | |
| TAAATCGTAAACGTCATAAG+GGG | - | chr2_2:57616495-57616514 | Msa0260120:intron | 30.0% | |
| AAAACAGACGATCTCTTAAA+AGG | + | chr2_2:57616622-57616641 | None:intergenic | 30.0% | |
| AAAAAGTTGGAACAGTTAGT+GGG | - | chr2_2:57616665-57616684 | Msa0260120:intron | 30.0% | |
| ATTGAGTTATGTGATACTGA+AGG | + | chr2_2:57616712-57616731 | None:intergenic | 30.0% | |
| ACATAACTCAATCAATGTTG+AGG | - | chr2_2:57616720-57616739 | Msa0260120:intron | 30.0% | |
| CATAACTCAATCAATGTTGA+GGG | - | chr2_2:57616721-57616740 | Msa0260120:intron | 30.0% | |
| CATATGAAGGTAGTCATTAT+TGG | + | chr2_2:57616770-57616789 | None:intergenic | 30.0% | |
| !! | CAATTTGAAAGTGCTAAGAA+GGG | - | chr2_2:57616991-57617010 | Msa0260120:CDS | 30.0% |
| TATGAGAACTCTTAAACCAT+GGG | + | chr2_2:57617089-57617108 | None:intergenic | 30.0% | |
| TTATGAGAACTCTTAAACCA+TGG | + | chr2_2:57617090-57617109 | None:intergenic | 30.0% | |
| !!! | CAATTTAATTTTGGAGCTGA+TGG | - | chr2_2:57617562-57617581 | Msa0260120:CDS | 30.0% |
| AATTTGGCTATCTTTCAACA+AGG | + | chr2_2:57617658-57617677 | None:intergenic | 30.0% | |
| TTCAGAACAAATATATGGTG+TGG | + | chr2_2:57617696-57617715 | None:intergenic | 30.0% | |
| TGGTCAGATTGAATAATATG+CGG | + | chr2_2:57617764-57617783 | None:intergenic | 30.0% | |
| CAAAAAAGAAAAGACCATCA+TGG | + | chr2_2:57617898-57617917 | None:intergenic | 30.0% | |
| !!! | ACAAATGGGACAATTTTTTG+TGG | - | chr2_2:57618024-57618043 | Msa0260120:intron | 30.0% |
| !!! | CAAATGGGACAATTTTTTGT+GGG | - | chr2_2:57618025-57618044 | Msa0260120:intron | 30.0% |
| !!! | AAATGGGACAATTTTTTGTG+GGG | - | chr2_2:57618026-57618045 | Msa0260120:intron | 30.0% |
| ATACATTCATTCTTTCAGTG+AGG | - | chr2_2:57618308-57618327 | Msa0260120:intron | 30.0% | |
| TATCTACACAAATATCTACG+AGG | - | chr2_2:57618461-57618480 | Msa0260120:intron | 30.0% | |
| ! | AAAATCTTTTTCCTCTCTTG+GGG | - | chr2_2:57618539-57618558 | Msa0260120:intron | 30.0% |
| !! | AATTTTGAAGACCTTGTTGT+GGG | - | chr2_2:57618598-57618617 | Msa0260120:intron | 30.0% |
| GTTGGTTGTTTGGTAAAAAA+AGG | - | chr2_2:57618685-57618704 | Msa0260120:intron | 30.0% | |
| TGGTTGTTTGGTAAAAAAAG+GGG | - | chr2_2:57618687-57618706 | Msa0260120:intron | 30.0% | |
| GTTTGAAAGAATTGGAGTTA+AGG | - | chr2_2:57618795-57618814 | Msa0260120:intron | 30.0% | |
| ! | TTACAGTTTTCGCTTCTTCA+TGG | - | chr2_2:57615295-57615314 | Msa0260120:CDS | 35.0% |
| ! | TTCTTCTTCCTTTTGAATGG+GGG | + | chr2_2:57615365-57615384 | None:intergenic | 35.0% |
| ! | CGTTTCTTCTTCCTTTTGAA+TGG | + | chr2_2:57615368-57615387 | None:intergenic | 35.0% |
| AAGACACCCAACAAGAAAAA+AGG | + | chr2_2:57615500-57615519 | None:intergenic | 35.0% | |
| TGATTGTGGCTGCAAAATTT+AGG | - | chr2_2:57615817-57615836 | Msa0260120:intron | 35.0% | |
| GATTGTGGCTGCAAAATTTA+GGG | - | chr2_2:57615818-57615837 | Msa0260120:intron | 35.0% | |
| ATCAACCTAATCAAGGATCA+TGG | - | chr2_2:57615878-57615897 | Msa0260120:intron | 35.0% | |
| ! | GCAACCGTAATTTAAAACCT+TGG | - | chr2_2:57615903-57615922 | Msa0260120:intron | 35.0% |
| GCATCACTAATTTCACATGT+GGG | + | chr2_2:57615940-57615959 | None:intergenic | 35.0% | |
| AGCATCACTAATTTCACATG+TGG | + | chr2_2:57615941-57615960 | None:intergenic | 35.0% | |
| TGTATGATTTAGAGGGATTG+AGG | - | chr2_2:57615973-57615992 | Msa0260120:intron | 35.0% | |
| !! | TTTTGTTGTGGTAGCAACTT+GGG | - | chr2_2:57616005-57616024 | Msa0260120:intron | 35.0% |
| ! | ATGGCTGGTGATAGTTTTTA+AGG | - | chr2_2:57616043-57616062 | Msa0260120:intron | 35.0% |
| TCTCATCTTCTGATTGTGAT+AGG | - | chr2_2:57616183-57616202 | Msa0260120:CDS | 35.0% | |
| ATAGAGGGGATTGTTTAAAG+AGG | - | chr2_2:57616236-57616255 | Msa0260120:CDS | 35.0% | |
| GTCAATTACATCATGGACAA+TGG | + | chr2_2:57616426-57616445 | None:intergenic | 35.0% | |
| CGTCAATGTCAATTACATCA+TGG | + | chr2_2:57616433-57616452 | None:intergenic | 35.0% | |
| TTACGGTGATCAACAAATTG+TGG | - | chr2_2:57616544-57616563 | Msa0260120:CDS | 35.0% | |
| GAAAAAGTTGGAACAGTTAG+TGG | - | chr2_2:57616664-57616683 | Msa0260120:intron | 35.0% | |
| !! | ACAGGCACAATTTGATAATG+TGG | - | chr2_2:57616831-57616850 | Msa0260120:intron | 35.0% |
| !! | GGTTTTGGCAACAATGTAAA+AGG | + | chr2_2:57616880-57616899 | None:intergenic | 35.0% |
| AAGAAGACTTTGCTTTACCT+TGG | + | chr2_2:57616906-57616925 | None:intergenic | 35.0% | |
| CTTTCAAATTGCCCCAAATA+TGG | + | chr2_2:57616982-57617001 | None:intergenic | 35.0% | |
| !! | GCAATTTGAAAGTGCTAAGA+AGG | - | chr2_2:57616990-57617009 | Msa0260120:CDS | 35.0% |
| TGAGTGATTGTAAAACCTGA+GGG | + | chr2_2:57617198-57617217 | None:intergenic | 35.0% | |
| ATGAGTGATTGTAAAACCTG+AGG | + | chr2_2:57617199-57617218 | None:intergenic | 35.0% | |
| ! | TTTCCTCAGGGTTTCATTTT+CGG | + | chr2_2:57617226-57617245 | None:intergenic | 35.0% |
| AAAACTTCGAAGTTTCCTCA+GGG | + | chr2_2:57617238-57617257 | None:intergenic | 35.0% | |
| TAAAACTTCGAAGTTTCCTC+AGG | + | chr2_2:57617239-57617258 | None:intergenic | 35.0% | |
| CAAAAAACTAACCTGCTTCA+CGG | + | chr2_2:57617319-57617338 | None:intergenic | 35.0% | |
| TTGGATTCTGCTTAGGAAAT+AGG | + | chr2_2:57617412-57617431 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTAGCCCAGCTCTT+TGG | + | chr2_2:57617431-57617450 | None:intergenic | 35.0% |
| CTAAAAAAATCCAGGAAGAG+TGG | - | chr2_2:57617441-57617460 | Msa0260120:CDS | 35.0% | |
| ATGTGATTGACGATATGACA+TGG | + | chr2_2:57617534-57617553 | None:intergenic | 35.0% | |
| ! | ATAGCCAAATTTTTCCTCGA+TGG | - | chr2_2:57617667-57617686 | Msa0260120:CDS | 35.0% |
| GGTCAGATTGAATAATATGC+GGG | + | chr2_2:57617763-57617782 | None:intergenic | 35.0% | |
| TTGTGAGAATCTTCGAATCA+AGG | - | chr2_2:57617825-57617844 | Msa0260120:intron | 35.0% | |
| AAGAAAAGACCATCATGGTA+AGG | + | chr2_2:57617893-57617912 | None:intergenic | 35.0% | |
| ! | ATTCAAGATTAGCCCTTGTA+TGG | + | chr2_2:57618203-57618222 | None:intergenic | 35.0% |
| TGTGATAAGAAATCCTCCTA+AGG | - | chr2_2:57618342-57618361 | Msa0260120:intron | 35.0% | |
| TAAGAAATCCTCCTAAGGTT+TGG | - | chr2_2:57618347-57618366 | Msa0260120:intron | 35.0% | |
| TCTACGAGGTGATATATGAT+TGG | - | chr2_2:57618475-57618494 | Msa0260120:intron | 35.0% | |
| !! | GAATTTTGAAGACCTTGTTG+TGG | - | chr2_2:57618597-57618616 | Msa0260120:intron | 35.0% |
| !! | ATTTTGAAGACCTTGTTGTG+GGG | - | chr2_2:57618599-57618618 | Msa0260120:intron | 35.0% |
| GAGGTCATGTAAATCATACA+CGG | - | chr2_2:57618651-57618670 | Msa0260120:intron | 35.0% | |
| TCATGTAAATCATACACGGA+AGG | - | chr2_2:57618655-57618674 | Msa0260120:intron | 35.0% | |
| AGTAAAGGAAAATGCTCAGA+TGG | - | chr2_2:57618727-57618746 | Msa0260120:intron | 35.0% | |
| ! | GGATTTAAGTCTGGTTTAGT+TGG | - | chr2_2:57618748-57618767 | Msa0260120:intron | 35.0% |
| ! | AAAACCCAATTTTCAGACTC+CGG | - | chr2_2:57618900-57618919 | Msa0260120:intron | 35.0% |
| TGATTTAGAGGCTGTGATTG+TGG | - | chr2_2:57615803-57615822 | Msa0260120:intron | 40.0% | |
| !!! | AGGCTATGTGAGTTTTGTTG+TGG | - | chr2_2:57615993-57616012 | Msa0260120:intron | 40.0% |
| !! | GTTTTGTTGTGGTAGCAACT+TGG | - | chr2_2:57616004-57616023 | Msa0260120:intron | 40.0% |
| ATTACAACAAAGGGAACCGA+AGG | + | chr2_2:57616264-57616283 | None:intergenic | 40.0% | |
| GCACTTGAAACCATTCATGA+GGG | - | chr2_2:57616521-57616540 | Msa0260120:CDS | 40.0% | |
| GAAACCATTCATGAGGGTTA+CGG | - | chr2_2:57616527-57616546 | Msa0260120:CDS | 40.0% | |
| !!! | GTTTTTGCTTTTTTGCAGCC+TGG | - | chr2_2:57616637-57616656 | Msa0260120:intron | 40.0% |
| TAGTCATTATTGGCCAACGA+TGG | + | chr2_2:57616760-57616779 | None:intergenic | 40.0% | |
| ! | AGACGAGTACGCTTTATTAC+AGG | - | chr2_2:57616813-57616832 | Msa0260120:intron | 40.0% |
| TTGTTGCCAAAACCTTTCCA+AGG | - | chr2_2:57616886-57616905 | Msa0260120:intron | 40.0% | |
| ! | GCTTTACCTTGGAAAGGTTT+TGG | + | chr2_2:57616895-57616914 | None:intergenic | 40.0% |
| GACTTTGCTTTACCTTGGAA+AGG | + | chr2_2:57616901-57616920 | None:intergenic | 40.0% | |
| TTTCCTAATTCTATGCCCAG+AGG | + | chr2_2:57617066-57617085 | None:intergenic | 40.0% | |
| GCATAGAATTAGGAAACCCA+TGG | - | chr2_2:57617070-57617089 | Msa0260120:intron | 40.0% | |
| ! | TTCCTCAGGGTTTCATTTTC+GGG | + | chr2_2:57617225-57617244 | None:intergenic | 40.0% |
| AAATAATTGCTCCGTGAAGC+AGG | - | chr2_2:57617305-57617324 | Msa0260120:CDS | 40.0% | |
| TAAGCAGAATCCAAAGAGCT+GGG | - | chr2_2:57617418-57617437 | Msa0260120:CDS | 40.0% | |
| TCAGGAATACTAAACTCACC+CGG | + | chr2_2:57617488-57617507 | None:intergenic | 40.0% | |
| GACACCATCGAGGAAAAATT+TGG | + | chr2_2:57617674-57617693 | None:intergenic | 40.0% | |
| TTGAATAATATGCGGGAAGC+AGG | + | chr2_2:57617756-57617775 | None:intergenic | 40.0% | |
| GAGAATCTTCGAATCAAGGA+TGG | - | chr2_2:57617829-57617848 | Msa0260120:intron | 40.0% | |
| CTCATGAGAGCTGTGATTAT+TGG | - | chr2_2:57617854-57617873 | Msa0260120:intron | 40.0% | |
| CTGTGATTATTGGAGCAGAA+GGG | - | chr2_2:57617864-57617883 | Msa0260120:intron | 40.0% | |
| AAGTATTCTCAACCACGTAC+CGG | + | chr2_2:57617956-57617975 | None:intergenic | 40.0% | |
| ! | AGGTTCTAGTCTCCATACAA+GGG | - | chr2_2:57618188-57618207 | Msa0260120:intron | 40.0% |
| TATCCAGGTTCATTGAAGCA+AGG | + | chr2_2:57618232-57618251 | None:intergenic | 40.0% | |
| ATCTTTGAGTGGCTCATCAA+GGG | - | chr2_2:57618255-57618274 | Msa0260120:intron | 40.0% | |
| CAAGAGTAGAACCAAACCTT+AGG | + | chr2_2:57618361-57618380 | None:intergenic | 40.0% | |
| !! | CTAAGGTTTGGTTCTACTCT+TGG | - | chr2_2:57618359-57618378 | Msa0260120:intron | 40.0% |
| !! | AGGTGTTCAAGTTGGTTGTT+TGG | - | chr2_2:57618675-57618694 | Msa0260120:intron | 40.0% |
| ! | TGCTCAGATGGATTTAAGTC+TGG | - | chr2_2:57618739-57618758 | Msa0260120:intron | 40.0% |
| TGACCACTGATGTAGTTATG+CGG | + | chr2_2:57618865-57618884 | None:intergenic | 40.0% | |
| CATAACTACATCAGTGGTCA+AGG | - | chr2_2:57618865-57618884 | Msa0260120:intron | 40.0% | |
| GTCTGAATCTGAAGATTGGA+GGG | + | chr2_2:57618934-57618953 | None:intergenic | 40.0% | |
| AGTCTGAATCTGAAGATTGG+AGG | + | chr2_2:57618935-57618954 | None:intergenic | 40.0% | |
| AGGAGTCTGAATCTGAAGAT+TGG | + | chr2_2:57618938-57618957 | None:intergenic | 40.0% | |
| GAGGAATGAAACTGAATCTG+AGG | + | chr2_2:57618958-57618977 | None:intergenic | 40.0% | |
| AGTCTGAATCTGAAGATTGG+AGG | + | chr2_2:57618935-57618954 | None:intergenic | 40.0% | |
| AGGAGTCTGAATCTGAAGAT+TGG | + | chr2_2:57618938-57618957 | None:intergenic | 40.0% | |
| GTCTGAATCTGAAGATTGGA+GGG | + | chr2_2:57618934-57618953 | None:intergenic | 40.0% | |
| AGTCTGAATCTGAAGATTGG+AGG | + | chr2_2:57618935-57618954 | None:intergenic | 40.0% | |
| AGGAGTCTGAATCTGAAGAT+TGG | + | chr2_2:57618938-57618957 | None:intergenic | 40.0% | |
| AACTCGCATAACTACATGAG+TGG | - | chr2_2:57619177-57619196 | Msa0260120:five_prime_UTR | 40.0% | |
| CATAACTACATGAGTGGTCA+AGG | - | chr2_2:57619183-57619202 | Msa0260120:five_prime_UTR | 40.0% | |
| TTGAGCGAAAGAGTGAGTGA+AGG | + | chr2_2:57615260-57615279 | None:intergenic | 45.0% | |
| CACTCACTCTTTCGCTCAAA+AGG | - | chr2_2:57615261-57615280 | Msa0260120:CDS | 45.0% | |
| GGAGGAATTTCAACAACGTC+AGG | + | chr2_2:57615323-57615342 | None:intergenic | 45.0% | |
| !! | TTTTGAATGGGGGTGTGTCT+TGG | + | chr2_2:57615355-57615374 | None:intergenic | 45.0% |
| AAGACACACCCCCATTCAAA+AGG | - | chr2_2:57615354-57615373 | Msa0260120:CDS | 45.0% | |
| TGCAGCCATGATCCTTGATT+AGG | + | chr2_2:57615886-57615905 | None:intergenic | 45.0% | |
| TGGGAGTGGAATGGTGTTTA+TGG | - | chr2_2:57616024-57616043 | Msa0260120:intron | 45.0% | |
| AGTGGAATGGTGTTTATGGC+TGG | - | chr2_2:57616028-57616047 | Msa0260120:intron | 45.0% | |
| TCGTAAACGTCATAAGGGGA+AGG | - | chr2_2:57616499-57616518 | Msa0260120:intron | 45.0% | |
| GGCACTTGAAACCATTCATG+AGG | - | chr2_2:57616520-57616539 | Msa0260120:CDS | 45.0% | |
| ATCACCGTAACCCTCATGAA+TGG | + | chr2_2:57616534-57616553 | None:intergenic | 45.0% | |
| !! | GTTCCAACTTTTTCCAAGCC+AGG | + | chr2_2:57616658-57616677 | None:intergenic | 45.0% |
| TCAATCAATGTTGAGGGCCA+AGG | - | chr2_2:57616727-57616746 | Msa0260120:intron | 45.0% | |
| GATAATGTGGATCTACCGAC+TGG | - | chr2_2:57616844-57616863 | Msa0260120:intron | 45.0% | |
| TGCGATGAAGCTGCCATATT+TGG | - | chr2_2:57616966-57616985 | Msa0260120:intron | 45.0% | |
| GCGATGAAGCTGCCATATTT+GGG | - | chr2_2:57616967-57616986 | Msa0260120:intron | 45.0% | |
| CGATGAAGCTGCCATATTTG+GGG | - | chr2_2:57616968-57616987 | Msa0260120:intron | 45.0% | |
| AATGGATCATCGCATCCTCT+GGG | - | chr2_2:57617048-57617067 | Msa0260120:intron | 45.0% | |
| CATCCTCTGGGCATAGAATT+AGG | - | chr2_2:57617060-57617079 | Msa0260120:intron | 45.0% | |
| CCACTGGATTCACCAAACAA+GGG | + | chr2_2:57617132-57617151 | None:intergenic | 45.0% | |
| ACCACTGGATTCACCAAACA+AGG | + | chr2_2:57617133-57617152 | None:intergenic | 45.0% | |
| AACCCGAAAATGAAACCCTG+AGG | - | chr2_2:57617220-57617239 | Msa0260120:CDS | 45.0% | |
| CAGCTCTTTGGATTCTGCTT+AGG | + | chr2_2:57617419-57617438 | None:intergenic | 45.0% | |
| CTAAGCAGAATCCAAAGAGC+TGG | - | chr2_2:57617417-57617436 | Msa0260120:CDS | 45.0% | |
| GAGCTGGGCTAAAAAAATCC+AGG | - | chr2_2:57617433-57617452 | Msa0260120:CDS | 45.0% | |
| CCAAAATCTTCCACTCTTCC+TGG | + | chr2_2:57617454-57617473 | None:intergenic | 45.0% | |
| ! | CCAGGAAGAGTGGAAGATTT+TGG | - | chr2_2:57617451-57617470 | Msa0260120:CDS | 45.0% |
| ! | GGAAGAGTGGAAGATTTTGG+AGG | - | chr2_2:57617454-57617473 | Msa0260120:CDS | 45.0% |
| !!! | GATTTTGGAGGAGCATTTGC+CGG | - | chr2_2:57617466-57617485 | Msa0260120:CDS | 45.0% |
| !!! | ATTTTGGAGGAGCATTTGCC+GGG | - | chr2_2:57617467-57617486 | Msa0260120:CDS | 45.0% |
| !! | AGCTGATGGACTTTACCACA+TGG | - | chr2_2:57617576-57617595 | Msa0260120:CDS | 45.0% |
| ! | GATGGACTTTACCACATGGT+AGG | - | chr2_2:57617580-57617599 | Msa0260120:CDS | 45.0% |
| TAGTTCCCGTCTTATCGCAA+GGG | - | chr2_2:57617605-57617624 | Msa0260120:CDS | 45.0% | |
| GGGAAGCAGGTTTGACATTA+TGG | + | chr2_2:57617743-57617762 | None:intergenic | 45.0% | |
| GCTGTGATTATTGGAGCAGA+AGG | - | chr2_2:57617863-57617882 | Msa0260120:intron | 45.0% | |
| GGTACATTGGGATATTCAGG+GGG | + | chr2_2:57617932-57617951 | None:intergenic | 45.0% | |
| GGGTACATTGGGATATTCAG+GGG | + | chr2_2:57617933-57617952 | None:intergenic | 45.0% | |
| GGGGTACATTGGGATATTCA+GGG | + | chr2_2:57617934-57617953 | None:intergenic | 45.0% | |
| TGAATATCCCAATGTACCCC+CGG | - | chr2_2:57617934-57617953 | Msa0260120:CDS | 45.0% | |
| AGTATTCTCAACCACGTACC+GGG | + | chr2_2:57617955-57617974 | None:intergenic | 45.0% | |
| AAAGTCCACTACCACTCTGT+AGG | - | chr2_2:57618052-57618071 | Msa0260120:intron | 45.0% | |
| ACTACCACTCTGTAGGTCAT+CGG | - | chr2_2:57618059-57618078 | Msa0260120:intron | 45.0% | |
| ACCAGGTGTTAAGTAGACTG+AGG | + | chr2_2:57618120-57618139 | None:intergenic | 45.0% | |
| AGTCTACTTAACACCTGGTC+TGG | - | chr2_2:57618121-57618140 | Msa0260120:intron | 45.0% | |
| AAGAATCAGATGTGGACTCC+AGG | - | chr2_2:57618148-57618167 | Msa0260120:intron | 45.0% | |
| TGTAGCATTGTCGAAACACC+TGG | + | chr2_2:57618169-57618188 | None:intergenic | 45.0% | |
| AGGTGTTTCGACAATGCTAC+AGG | - | chr2_2:57618168-57618187 | Msa0260120:intron | 45.0% | |
| ! | CAGGTTCTAGTCTCCATACA+AGG | - | chr2_2:57618187-57618206 | Msa0260120:intron | 45.0% |
| AAGCCTTGCTTCAATGAACC+TGG | - | chr2_2:57618226-57618245 | Msa0260120:intron | 45.0% | |
| CCACTCAAAGATGCATATCC+AGG | + | chr2_2:57618247-57618266 | None:intergenic | 45.0% | |
| CCTGGATATGCATCTTTGAG+TGG | - | chr2_2:57618244-57618263 | Msa0260120:intron | 45.0% | |
| CATCTTTGAGTGGCTCATCA+AGG | - | chr2_2:57618254-57618273 | Msa0260120:intron | 45.0% | |
| TCTTTGAGTGGCTCATCAAG+GGG | - | chr2_2:57618256-57618275 | Msa0260120:intron | 45.0% | |
| GAGTAGAACCAAACCTTAGG+AGG | + | chr2_2:57618358-57618377 | None:intergenic | 45.0% | |
| ! | GGGGTTCAAGCAACTGATTT+AGG | - | chr2_2:57618558-57618577 | Msa0260120:intron | 45.0% |
| TGTAGAAATGCCCCACAACA+AGG | + | chr2_2:57618612-57618631 | None:intergenic | 45.0% | |
| GCAGAGCACATGATATCATG+AGG | - | chr2_2:57618632-57618651 | Msa0260120:intron | 45.0% | |
| !! | TACACGGAAGGTGTTCAAGT+TGG | - | chr2_2:57618667-57618686 | Msa0260120:intron | 45.0% |
| GACCACTGATGTAGTTATGC+GGG | + | chr2_2:57618864-57618883 | None:intergenic | 45.0% | |
| AGGACCGGAGTCTGAAAATT+GGG | + | chr2_2:57618907-57618926 | None:intergenic | 45.0% | |
| AAGGACCGGAGTCTGAAAAT+TGG | + | chr2_2:57618908-57618927 | None:intergenic | 45.0% | |
| TCTGAAGATTGGAGGGATGA+AGG | + | chr2_2:57618927-57618946 | None:intergenic | 45.0% | |
| ! | TCCCTCCAATTTTCAGACTC+CGG | - | chr2_2:57619074-57619093 | Msa0260120:CDS | 45.0% |
| ACCGGAGTCTGAAAATTGGA+GGG | + | chr2_2:57619078-57619097 | None:intergenic | 45.0% | |
| !! | AAGCACCGGAGTCTGAAAAT+TGG | + | chr2_2:57619082-57619101 | None:intergenic | 45.0% |
| CATGTACAACCTTCCTCTCT+CGG | - | chr2_2:57619116-57619135 | Msa0260120:CDS | 45.0% | |
| ATGTACAACCTTCCTCTCTC+GGG | - | chr2_2:57619117-57619136 | Msa0260120:CDS | 45.0% | |
| ! | GAGTTGTACACAGTACTGGA+GGG | + | chr2_2:57619162-57619181 | None:intergenic | 45.0% |
| ATGCGAGTTGTACACAGTAC+TGG | + | chr2_2:57619166-57619185 | None:intergenic | 45.0% | |
| !!! | AATTATTTTTAATAAAGTAA+TGG | + | chr2_2:57617293-57617312 | None:intergenic | 5.0% |
| ! | AGTGAGTGAAGGTTTTGCGC+GGG | + | chr2_2:57615249-57615268 | None:intergenic | 50.0% |
| ! | GAGTGAGTGAAGGTTTTGCG+CGG | + | chr2_2:57615250-57615269 | None:intergenic | 50.0% |
| GTGTCTTGGTGAATTGGAGG+AGG | + | chr2_2:57615341-57615360 | None:intergenic | 50.0% | |
| GGTGTGTCTTGGTGAATTGG+AGG | + | chr2_2:57615344-57615363 | None:intergenic | 50.0% | |
| TGCAGTTGCGATCGCAATTG+CGG | - | chr2_2:57615851-57615870 | Msa0260120:intron | 50.0% | |
| CGGCAGCATCAACCTAATCA+AGG | - | chr2_2:57615871-57615890 | Msa0260120:intron | 50.0% | |
| TTGTGGTAGCAACTTGGGAG+TGG | - | chr2_2:57616010-57616029 | Msa0260120:intron | 50.0% | |
| GTAGCAACTTGGGAGTGGAA+TGG | - | chr2_2:57616015-57616034 | Msa0260120:intron | 50.0% | |
| !!! | TGCTTTTTTGCAGCCTGGCT+TGG | - | chr2_2:57616642-57616661 | Msa0260120:intron | 50.0% |
| !! | CAGCCTGGCTTGGAAAAAGT+TGG | - | chr2_2:57616652-57616671 | Msa0260120:intron | 50.0% |
| AATGTTGAGGGCCAAGGTTC+TGG | - | chr2_2:57616733-57616752 | Msa0260120:intron | 50.0% | |
| ! | GGATCTACCGACTGGAATTG+AGG | - | chr2_2:57616852-57616871 | Msa0260120:intron | 50.0% |
| !! | AAAGGCGCCTCAATTCCAGT+CGG | + | chr2_2:57616862-57616881 | None:intergenic | 50.0% |
| TATGGCAGCTTCATCGCATC+TGG | + | chr2_2:57616964-57616983 | None:intergenic | 50.0% | |
| !! | GAAAGTGCTAAGAAGGGAGC+TGG | - | chr2_2:57616997-57617016 | Msa0260120:CDS | 50.0% |
| CAATGGATCATCGCATCCTC+TGG | - | chr2_2:57617047-57617066 | Msa0260120:intron | 50.0% | |
| GATTCACCAAACAAGGGCTC+AGG | + | chr2_2:57617126-57617145 | None:intergenic | 50.0% | |
| ! | CCCTTGTTTGGTGAATCCAG+TGG | - | chr2_2:57617129-57617148 | Msa0260120:intron | 50.0% |
| ! | TCTGGCAGATTTGAGACCAC+TGG | + | chr2_2:57617148-57617167 | None:intergenic | 50.0% |
| CTAGTTCCCGTCTTATCGCA+AGG | - | chr2_2:57617604-57617623 | Msa0260120:CDS | 50.0% | |
| AGTTCCCGTCTTATCGCAAG+GGG | - | chr2_2:57617606-57617625 | Msa0260120:CDS | 50.0% | |
| ATATGGTGTGGACACCATCG+AGG | + | chr2_2:57617684-57617703 | None:intergenic | 50.0% | |
| GAAGGGACTCCTTACCATGA+TGG | - | chr2_2:57617881-57617900 | Msa0260120:intron | 50.0% | |
| ! | GGGGGTACATTGGGATATTC+AGG | + | chr2_2:57617935-57617954 | None:intergenic | 50.0% |
| TATTCTCAACCACGTACCGG+GGG | + | chr2_2:57617953-57617972 | None:intergenic | 50.0% | |
| GTATTCTCAACCACGTACCG+GGG | + | chr2_2:57617954-57617973 | None:intergenic | 50.0% | |
| GATGACCTACAGAGTGGTAG+TGG | + | chr2_2:57618060-57618079 | None:intergenic | 50.0% | |
| TAAGCCGATGACCTACAGAG+TGG | + | chr2_2:57618066-57618085 | None:intergenic | 50.0% | |
| GCCTCAGTCTACTTAACACC+TGG | - | chr2_2:57618116-57618135 | Msa0260120:intron | 50.0% | |
| CTGGCGACAAGAATCAGATG+TGG | - | chr2_2:57618140-57618159 | Msa0260120:intron | 50.0% | |
| AGTTGCTTGAACCCCAAGAG+AGG | + | chr2_2:57618553-57618572 | None:intergenic | 50.0% | |
| CACTGATGTAGTTATGCGGG+TGG | + | chr2_2:57618861-57618880 | None:intergenic | 50.0% | |
| CACCCGCATAACTACATCAG+TGG | - | chr2_2:57618859-57618878 | Msa0260120:intron | 50.0% | |
| AGATTGGAGGGATGAAGGAC+CGG | + | chr2_2:57618922-57618941 | None:intergenic | 50.0% | |
| GACTCCTCAGATTCAGACTC+CGG | - | chr2_2:57618993-57619012 | Msa0260120:intron | 50.0% | |
| AGATTGGAGGGATGAAGCAC+CGG | + | chr2_2:57619015-57619034 | None:intergenic | 50.0% | |
| GACTCCTCAGATTCAGACTC+AGG | - | chr2_2:57618993-57619012 | Msa0260120:intron | 50.0% | |
| AGCACCTGAGTCTGAATCTG+AGG | + | chr2_2:57619051-57619070 | None:intergenic | 50.0% | |
| CACCGGAGTCTGAAAATTGG+AGG | + | chr2_2:57619079-57619098 | None:intergenic | 50.0% | |
| AGGAAGGTTGTACATGGCAC+CGG | + | chr2_2:57619112-57619131 | None:intergenic | 50.0% | |
| CGAGAGAGGAAGGTTGTACA+TGG | + | chr2_2:57619118-57619137 | None:intergenic | 50.0% | |
| ! | TTGTACACAGTACTGGAGGG+AGG | + | chr2_2:57619159-57619178 | None:intergenic | 50.0% |
| ! | CGAGTTGTACACAGTACTGG+AGG | + | chr2_2:57619163-57619182 | None:intergenic | 50.0% |
| ! | GTGAGTGAAGGTTTTGCGCG+GGG | + | chr2_2:57615248-57615267 | None:intergenic | 55.0% |
| ! | GGGGGTGTGTCTTGGTGAAT+TGG | + | chr2_2:57615347-57615366 | None:intergenic | 55.0% |
| TGTGGGTCCCAACATTGCCA+AGG | + | chr2_2:57615923-57615942 | None:intergenic | 55.0% | |
| CCAACGATGGACCAGAACCT+TGG | + | chr2_2:57616747-57616766 | None:intergenic | 55.0% | |
| ! | CCAAGGTTCTGGTCCATCGT+TGG | - | chr2_2:57616744-57616763 | Msa0260120:intron | 55.0% |
| ACCAAACAAGGGCTCAGGAG+TGG | + | chr2_2:57617121-57617140 | None:intergenic | 55.0% | |
| GGTCTCAAATCTGCCAGAGC+TGG | - | chr2_2:57617150-57617169 | Msa0260120:CDS | 55.0% | |
| CGGGAACTAGACCTACCATG+TGG | + | chr2_2:57617594-57617613 | None:intergenic | 55.0% | |
| GAAGCCCCTTGCGATAAGAC+GGG | + | chr2_2:57617613-57617632 | None:intergenic | 55.0% | |
| CGAAGCCCCTTGCGATAAGA+CGG | + | chr2_2:57617614-57617633 | None:intergenic | 55.0% | |
| CTGATTCTTGTCGCCAGACC+AGG | + | chr2_2:57618137-57618156 | None:intergenic | 55.0% | |
| AGTGGCTCATCAAGGGGTGA+AGG | - | chr2_2:57618262-57618281 | Msa0260120:intron | 55.0% | |
| GTGGCTCATCAAGGGGTGAA+GGG | - | chr2_2:57618263-57618282 | Msa0260120:intron | 55.0% | |
| GTAGTTATGCGGGTGGTACG+CGG | + | chr2_2:57618854-57618873 | None:intergenic | 55.0% | |
| ! | AGCACCGGAGTCTGAATCTG+AGG | + | chr2_2:57619000-57619019 | None:intergenic | 55.0% |
| ! | AGGTTGTACATGGCACCGGA+GGG | + | chr2_2:57619108-57619127 | None:intergenic | 55.0% |
| ! | AAGGTTGTACATGGCACCGG+AGG | + | chr2_2:57619109-57619128 | None:intergenic | 55.0% |
| GGAGGGAGGAAGGTTGTACA+CGG | + | chr2_2:57619145-57619164 | None:intergenic | 55.0% | |
| ! | ACACAGTACTGGAGGGAGGA+AGG | + | chr2_2:57619155-57619174 | None:intergenic | 55.0% |
| GCCACTCCTGAGCCCTTGTT+TGG | - | chr2_2:57617117-57617136 | Msa0260120:intron | 60.0% | |
| TCTGCCAGAGCTGGACGTGA+TGG | - | chr2_2:57617159-57617178 | Msa0260120:CDS | 60.0% | |
| TGCTCCATCACGTCCAGCTC+TGG | + | chr2_2:57617166-57617185 | None:intergenic | 60.0% | |
| ! | TGGACGTGATGGAGCAGCTG+TGG | - | chr2_2:57617170-57617189 | Msa0260120:CDS | 60.0% |
| ! | CCACGTACCGGGGGTACATT+GGG | + | chr2_2:57617944-57617963 | None:intergenic | 60.0% |
| ! | ACCACGTACCGGGGGTACAT+TGG | + | chr2_2:57617945-57617964 | None:intergenic | 60.0% |
| ACTCCGGTGCTTCAACCCTC+CGG | - | chr2_2:57619090-57619109 | Msa0260120:CDS | 60.0% | |
| TTGTACACGGCACCCGAGAG+AGG | + | chr2_2:57619132-57619151 | None:intergenic | 60.0% | |
| GGAGCAGCTGTGGTTCCCTC+AGG | - | chr2_2:57617180-57617199 | Msa0260120:CDS | 65.0% | |
| CCCAATGTACCCCCGGTACG+TGG | - | chr2_2:57617941-57617960 | Msa0260120:CDS | 65.0% | |
| ! | TGGTACGCGGTACTGGAGGG+AGG | + | chr2_2:57618841-57618860 | None:intergenic | 65.0% |
| ! | GGGTGGTACGCGGTACTGGA+GGG | + | chr2_2:57618844-57618863 | None:intergenic | 65.0% |
| ATGCGGGTGGTACGCGGTAC+TGG | + | chr2_2:57618848-57618867 | None:intergenic | 65.0% | |
| GCACCGGAGGGTTGAAGCAC+CGG | + | chr2_2:57619096-57619115 | None:intergenic | 65.0% | |
| ACACGGCACCCGAGAGAGGA+AGG | + | chr2_2:57619128-57619147 | None:intergenic | 65.0% | |
| ! | CGGGTGGTACGCGGTACTGG+AGG | + | chr2_2:57618845-57618864 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 57615241 | 57619221 | 57615241 | ID=Msa0260120;Name=Msa0260120 |
| chr2_2 | mRNA | 57615241 | 57619221 | 57615241 | ID=Msa0260120-mRNA-1;Parent=Msa0260120;Name=Msa0260120-mRNA-1;_AED=0.32;_eAED=0.33;_QI=73|0.83|0.85|1|1|1|7|0|570 |
| chr2_2 | exon | 57615241 | 57615546 | 57615241 | ID=Msa0260120-mRNA-1:exon:17548;Parent=Msa0260120-mRNA-1 |
| chr2_2 | exon | 57616099 | 57616410 | 57616099 | ID=Msa0260120-mRNA-1:exon:17547;Parent=Msa0260120-mRNA-1 |
| chr2_2 | exon | 57616507 | 57616646 | 57616507 | ID=Msa0260120-mRNA-1:exon:17546;Parent=Msa0260120-mRNA-1 |
| chr2_2 | exon | 57616974 | 57617037 | 57616974 | ID=Msa0260120-mRNA-1:exon:17545;Parent=Msa0260120-mRNA-1 |
| chr2_2 | exon | 57617136 | 57617807 | 57617136 | ID=Msa0260120-mRNA-1:exon:17544;Parent=Msa0260120-mRNA-1 |
| chr2_2 | exon | 57617897 | 57618040 | 57617897 | ID=Msa0260120-mRNA-1:exon:17543;Parent=Msa0260120-mRNA-1 |
| chr2_2 | exon | 57619074 | 57619221 | 57619074 | ID=Msa0260120-mRNA-1:exon:17542;Parent=Msa0260120-mRNA-1 |
| chr2_2 | five_prime_UTR | 57619149 | 57619221 | 57619149 | ID=Msa0260120-mRNA-1:five_prime_utr;Parent=Msa0260120-mRNA-1 |
| chr2_2 | CDS | 57619074 | 57619148 | 57619074 | ID=Msa0260120-mRNA-1:cds;Parent=Msa0260120-mRNA-1 |
| chr2_2 | CDS | 57617897 | 57618040 | 57617897 | ID=Msa0260120-mRNA-1:cds;Parent=Msa0260120-mRNA-1 |
| chr2_2 | CDS | 57617136 | 57617807 | 57617136 | ID=Msa0260120-mRNA-1:cds;Parent=Msa0260120-mRNA-1 |
| chr2_2 | CDS | 57616974 | 57617037 | 57616974 | ID=Msa0260120-mRNA-1:cds;Parent=Msa0260120-mRNA-1 |
| chr2_2 | CDS | 57616507 | 57616646 | 57616507 | ID=Msa0260120-mRNA-1:cds;Parent=Msa0260120-mRNA-1 |
| chr2_2 | CDS | 57616099 | 57616410 | 57616099 | ID=Msa0260120-mRNA-1:cds;Parent=Msa0260120-mRNA-1 |
| chr2_2 | CDS | 57615241 | 57615546 | 57615241 | ID=Msa0260120-mRNA-1:cds;Parent=Msa0260120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
