Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256290 | XP_013464699.2 | 65.094 | 106 | 22 | 4 | 467 | 570 | 553 | 645 | 1.24e-24 | 120 |
| Msa0256290 | XP_013464699.2 | 81.488 | 578 | 92 | 5 | 1 | 569 | 1 | 572 | 0.0 | 873 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256290 | sp|Q8GY87|UBC26_ARATH | 40.000 | 490 | 222 | 11 | 1 | 469 | 1 | 439 | 1.82e-94 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256290 | A0A396JCT9 | 65.094 | 106 | 22 | 4 | 467 | 570 | 553 | 645 | 5.94e-25 | 120 |
| Msa0256290 | A0A396JCT9 | 81.488 | 578 | 92 | 5 | 1 | 569 | 1 | 572 | 0.0 | 873 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0256290 | Msa0260120 | 0.995238 | 2.568984e-214 | -8.615850e-47 |
| Msa0256290 | Msa1039480 | 0.823830 | 1.121498e-53 | -8.615850e-47 |
| Msa0256290 | Msa1085590 | 0.824075 | 9.821903e-54 | -8.615850e-47 |
| Msa0256290 | Msa1173370 | -0.803018 | 4.259268e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256290 | MtrunA17_Chr2g0317631 | 81.488 | 578 | 92 | 5 | 1 | 569 | 1 | 572 | 0.0 | 873 |
| Msa0256290 | MtrunA17_Chr2g0317631 | 65.094 | 106 | 22 | 4 | 467 | 570 | 553 | 645 | 1.14e-28 | 120 |
| Msa0256290 | MtrunA17_Chr1g0198021 | 78.715 | 249 | 53 | 0 | 221 | 469 | 55 | 303 | 2.93e-135 | 399 |
| Msa0256290 | MtrunA17_Chr8g0360171 | 51.948 | 385 | 152 | 6 | 118 | 470 | 285 | 668 | 8.75e-113 | 353 |
| Msa0256290 | MtrunA17_Chr8g0360171 | 41.916 | 167 | 82 | 3 | 1 | 152 | 42 | 208 | 2.68e-14 | 76.3 |
| Msa0256290 | MtrunA17_Chr7g0222941 | 70.500 | 200 | 59 | 0 | 247 | 446 | 34 | 233 | 1.82e-97 | 296 |
| Msa0256290 | MtrunA17_Chr8g0376201 | 52.920 | 274 | 112 | 3 | 198 | 469 | 100 | 358 | 1.38e-90 | 286 |
| Msa0256290 | MtrunA17_Chr2g0317611 | 78.049 | 164 | 36 | 0 | 221 | 384 | 11 | 174 | 3.89e-90 | 275 |
| Msa0256290 | MtrunA17_Chr4g0047301 | 59.799 | 199 | 77 | 2 | 274 | 469 | 639 | 837 | 1.56e-77 | 263 |
| Msa0256290 | MtrunA17_Chr2g0282211 | 58.883 | 197 | 79 | 1 | 274 | 468 | 650 | 846 | 1.09e-76 | 261 |
| Msa0256290 | MtrunA17_Chr2g0317641 | 82.394 | 142 | 23 | 1 | 330 | 469 | 1 | 142 | 2.82e-76 | 239 |
| Msa0256290 | MtrunA17_Chr1g0211131 | 51.210 | 248 | 101 | 4 | 235 | 469 | 748 | 988 | 1.99e-75 | 259 |
| Msa0256290 | MtrunA17_Chr7g0233611 | 56.566 | 198 | 80 | 3 | 276 | 469 | 7 | 202 | 6.23e-71 | 231 |
| Msa0256290 | MtrunA17_Chr8g0376111 | 57.653 | 196 | 79 | 2 | 277 | 469 | 13 | 207 | 2.58e-70 | 229 |
| Msa0256290 | MtrunA17_Chr4g0045101 | 53.571 | 196 | 87 | 2 | 277 | 469 | 7 | 201 | 5.18e-67 | 220 |
| Msa0256290 | MtrunA17_Chr7g0233631 | 53.571 | 196 | 87 | 2 | 277 | 469 | 8 | 202 | 1.92e-65 | 216 |
| Msa0256290 | MtrunA17_Chr2g0285321 | 60.140 | 143 | 52 | 3 | 330 | 469 | 1 | 141 | 4.73e-47 | 164 |
| Msa0256290 | MtrunA17_Chr4g0001491 | 35.316 | 269 | 104 | 6 | 262 | 470 | 39 | 297 | 1.38e-35 | 135 |
| Msa0256290 | MtrunA17_Chr2g0317621 | 71.642 | 67 | 19 | 0 | 403 | 469 | 23 | 89 | 4.77e-24 | 100 |
| Msa0256290 | MtrunA17_Chr3g0108261 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 2.40e-12 | 65.1 |
| Msa0256290 | MtrunA17_Chr5g0432831 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 2.70e-12 | 64.7 |
| Msa0256290 | MtrunA17_Chr4g0037011 | 31.707 | 123 | 74 | 3 | 303 | 425 | 3 | 115 | 2.94e-12 | 64.7 |
| Msa0256290 | MtrunA17_Chr7g0275361 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.81e-12 | 64.3 |
| Msa0256290 | MtrunA17_Chr8g0362321 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.49e-11 | 62.8 |
| Msa0256290 | MtrunA17_Chr1g0154011 | 30.081 | 123 | 76 | 3 | 303 | 425 | 3 | 115 | 1.59e-11 | 62.4 |
| Msa0256290 | MtrunA17_Chr4g0060351 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 2.32e-11 | 62.4 |
| Msa0256290 | MtrunA17_Chr8g0369311 | 30.081 | 123 | 76 | 3 | 303 | 425 | 59 | 171 | 7.62e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256290 | AT1G53025.1 | 40.000 | 490 | 222 | 11 | 1 | 469 | 1 | 439 | 1.85e-95 | 302 |
| Msa0256290 | AT1G53025.2 | 40.000 | 490 | 222 | 11 | 1 | 469 | 1 | 439 | 3.35e-95 | 301 |
| Msa0256290 | AT3G15355.1 | 37.288 | 531 | 240 | 13 | 1 | 469 | 1 | 500 | 2.07e-91 | 293 |
| Msa0256290 | AT1G53023.1 | 61.307 | 199 | 68 | 1 | 271 | 460 | 18 | 216 | 3.11e-82 | 260 |
| Msa0256290 | AT2G16920.1 | 57.868 | 197 | 82 | 1 | 273 | 469 | 823 | 1018 | 3.31e-72 | 251 |
| Msa0256290 | AT2G16920.2 | 57.868 | 197 | 82 | 1 | 273 | 469 | 823 | 1018 | 3.31e-72 | 251 |
| Msa0256290 | AT2G33770.1 | 55.340 | 206 | 90 | 1 | 266 | 469 | 625 | 830 | 1.38e-70 | 244 |
| Msa0256290 | AT4G27960.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.07e-12 | 65.1 |
| Msa0256290 | AT1G64230.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.72e-12 | 64.7 |
| Msa0256290 | AT1G64230.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 3.72e-12 | 64.7 |
| Msa0256290 | AT5G53300.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 4.14e-12 | 64.7 |
| Msa0256290 | AT5G53300.4 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 4.14e-12 | 64.7 |
| Msa0256290 | AT5G53300.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 4.14e-12 | 64.7 |
| Msa0256290 | AT5G41700.4 | 32.258 | 124 | 73 | 4 | 303 | 425 | 3 | 116 | 5.18e-12 | 64.3 |
| Msa0256290 | AT5G41700.5 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 5.69e-12 | 64.3 |
| Msa0256290 | AT5G41700.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 5.69e-12 | 64.3 |
| Msa0256290 | AT5G41700.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 5.69e-12 | 64.3 |
| Msa0256290 | AT3G08690.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 9.95e-12 | 63.5 |
| Msa0256290 | AT3G08690.1 | 30.894 | 123 | 75 | 3 | 303 | 425 | 3 | 115 | 9.95e-12 | 63.5 |
| Msa0256290 | AT1G14400.1 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.08e-11 | 63.5 |
| Msa0256290 | AT1G14400.2 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.08e-11 | 63.5 |
| Msa0256290 | AT2G02760.1 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0256290 | AT2G02760.2 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0256290 | AT2G02760.4 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0256290 | AT2G02760.3 | 31.967 | 122 | 73 | 4 | 304 | 425 | 7 | 118 | 1.24e-11 | 63.5 |
| Msa0256290 | AT4G27960.2 | 30.894 | 123 | 75 | 3 | 303 | 425 | 33 | 145 | 4.14e-11 | 62.4 |
| Msa0256290 | AT5G56150.1 | 29.268 | 123 | 77 | 3 | 303 | 425 | 3 | 115 | 8.21e-11 | 60.8 |
Find 155 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGATGAAGCTGCCATATT+TGG | 0.122740 | 2_2:-50987314 | Msa0256290:CDS |
| TTGCCACAATTATACAAATT+TGG | 0.162066 | 2_2:+50986192 | None:intergenic |
| CCAGGAAGAGTGGAAGATTT+TGG | 0.234251 | 2_2:-50986829 | Msa0256290:CDS |
| CATCCTCTGGGCATAGAATT+AGG | 0.261535 | 2_2:-50987220 | Msa0256290:CDS |
| GATGATGATTTAATGATAAT+TGG | 0.268682 | 2_2:-50987813 | Msa0256290:CDS |
| CCAAAATCTTCCACTCTTCC+TGG | 0.274799 | 2_2:+50986829 | None:intergenic |
| GCTTTACCTTGGAAAGGTTT+TGG | 0.300215 | 2_2:+50987388 | None:intergenic |
| CTCATGAGAGCTGTGATTAT+TGG | 0.300913 | 2_2:-50986426 | Msa0256290:CDS |
| CTTTCAAATTGCCCCAAATA+TGG | 0.305553 | 2_2:+50987301 | None:intergenic |
| CATATGAAGGTAGTCATTAT+TGG | 0.311282 | 2_2:+50987513 | None:intergenic |
| GCGATGAAGCTGCCATATTT+GGG | 0.333638 | 2_2:-50987313 | Msa0256290:CDS |
| CACTCACTCTTTCGCTCAAA+AGG | 0.363102 | 2_2:-50989020 | Msa0256290:five_prime_UTR |
| GCCACTCCTGAGCCCTTGTT+TGG | 0.365425 | 2_2:-50987163 | Msa0256290:CDS |
| CAATGGATCATCGCATCCTC+TGG | 0.376275 | 2_2:-50987233 | Msa0256290:CDS |
| AGACGAGTACGCTTTATTAC+AGG | 0.389106 | 2_2:-50987467 | Msa0256290:CDS |
| AATGTTGAGGGCCAAGGTTC+TGG | 0.399244 | 2_2:-50987547 | Msa0256290:CDS |
| TGCTCCATCACGTCCAGCTC+TGG | 0.400168 | 2_2:+50987117 | None:intergenic |
| TATGGCAGCTTCATCGCATC+TGG | 0.404869 | 2_2:+50987319 | None:intergenic |
| AATAAATCGTAAACGTCATA+AGG | 0.405788 | 2_2:-50987787 | Msa0256290:CDS |
| TCATTCCATTCAAATTTCAA+TGG | 0.409772 | 2_2:-50987250 | Msa0256290:CDS |
| AAGCACCGGAGTCTGAAAAT+TGG | 0.411077 | 2_2:+50985201 | None:intergenic |
| ATAAATCGTAAACGTCATAA+GGG | 0.421260 | 2_2:-50987786 | Msa0256290:CDS |
| GCACCGGAGGGTTGAAGCAC+CGG | 0.423314 | 2_2:+50985187 | None:intergenic |
| CATGTACAACCTTCCTCTCT+CGG | 0.435959 | 2_2:-50985164 | Msa0256290:CDS |
| TAAAACTTCGAAGTTTCCTC+AGG | 0.441133 | 2_2:+50987044 | None:intergenic |
| ATTCAAGATTAGCCCTTGTA+TGG | 0.445082 | 2_2:+50986080 | None:intergenic |
| AAGAAGACTTTGCTTTACCT+TGG | 0.447028 | 2_2:+50987377 | None:intergenic |
| AGGAGTCTGAATCTGAAGAT+TGG | 0.451607 | 2_2:+50985252 | None:intergenic |
| AGGAGTCTGAATCTGAAGAT+TGG | 0.451607 | 2_2:+50985303 | None:intergenic |
| AGGAGTCTGAATCTGAAGAT+TGG | 0.451607 | 2_2:+50985345 | None:intergenic |
| ATGATCCATTGAAATTTGAA+TGG | 0.452022 | 2_2:+50987245 | None:intergenic |
| GGAGCAGCTGTGGTTCCCTC+AGG | 0.453305 | 2_2:-50987100 | Msa0256290:CDS |
| CAGGTTCTAGTCTCCATACA+AGG | 0.456836 | 2_2:-50986093 | Msa0256290:CDS |
| AAATAATTGCTCCGTGAAGC+AGG | 0.460402 | 2_2:-50986975 | Msa0256290:intron |
| TTATGAGAACTCTTAAACCA+TGG | 0.462203 | 2_2:+50987193 | None:intergenic |
| TTGTGAGAATCTTCGAATCA+AGG | 0.463581 | 2_2:-50986455 | Msa0256290:CDS |
| AATCCAAATTTGTATAATTG+TGG | 0.465186 | 2_2:-50986195 | Msa0256290:CDS |
| GCAATTTGAAAGTGCTAAGA+AGG | 0.469287 | 2_2:-50987290 | Msa0256290:CDS |
| GGTGTGTCTTGGTGAATTGG+AGG | 0.470137 | 2_2:+50988940 | None:intergenic |
| CTGATTCTTGTCGCCAGACC+AGG | 0.476720 | 2_2:+50986146 | None:intergenic |
| GGTCTCAAATCTGCCAGAGC+TGG | 0.481148 | 2_2:-50987130 | Msa0256290:CDS |
| AGGTGTTTCGACAATGCTAC+AGG | 0.482283 | 2_2:-50986112 | Msa0256290:CDS |
| CCACTCAAAGATGCATATCC+AGG | 0.482310 | 2_2:+50986036 | None:intergenic |
| GGAGGAATTTCAACAACGTC+AGG | 0.492026 | 2_2:+50988961 | None:intergenic |
| TCAATTACATCATGGACAAT+GGG | 0.493272 | 2_2:+50987858 | None:intergenic |
| CATCTTTGAGTGGCTCATCA+AGG | 0.498412 | 2_2:-50986026 | Msa0256290:CDS |
| ATCACCGTAACCCTCATGAA+TGG | 0.498420 | 2_2:+50987749 | None:intergenic |
| TCTGAAGATTGGAGGGATGA+AGG | 0.499059 | 2_2:+50985356 | None:intergenic |
| CATTCAAAAGGAAGAAGAAA+CGG | 0.506292 | 2_2:-50988915 | Msa0256290:CDS |
| GTCAATTACATCATGGACAA+TGG | 0.508003 | 2_2:+50987857 | None:intergenic |
| GAAACCATTCATGAGGGTTA+CGG | 0.510761 | 2_2:-50987753 | Msa0256290:CDS |
| GACTTTGCTTTACCTTGGAA+AGG | 0.512989 | 2_2:+50987382 | None:intergenic |
| ACTCCGGTGCTTCAACCCTC+CGG | 0.515511 | 2_2:-50985190 | Msa0256290:CDS |
| CTAAGCAGAATCCAAAGAGC+TGG | 0.518907 | 2_2:-50986863 | Msa0256290:intron |
| ATGTACAACCTTCCTCTCTC+GGG | 0.519390 | 2_2:-50985163 | Msa0256290:CDS |
| AAGCCTTGCTTCAATGAACC+TGG | 0.524390 | 2_2:-50986054 | Msa0256290:CDS |
| AGTCTACTTAACACCTGGTC+TGG | 0.527101 | 2_2:-50986159 | Msa0256290:CDS |
| CCAACGATGGACCAGAACCT+TGG | 0.528662 | 2_2:+50987536 | None:intergenic |
| CATAACTCAATCAATGTTGA+GGG | 0.528984 | 2_2:-50987559 | Msa0256290:CDS |
| ATCTTTGAGTGGCTCATCAA+GGG | 0.529420 | 2_2:-50986025 | Msa0256290:CDS |
| TCTGGCAGATTTGAGACCAC+TGG | 0.529572 | 2_2:+50987135 | None:intergenic |
| TCAATCAATGTTGAGGGCCA+AGG | 0.529983 | 2_2:-50987553 | Msa0256290:CDS |
| ATTCAAAAGGAAGAAGAAAC+GGG | 0.530200 | 2_2:-50988914 | Msa0256290:intron |
| ATGCGAGTTGTACACAGTAC+TGG | 0.530792 | 2_2:+50985117 | None:intergenic |
| AGTCTGAATCTGAAGATTGG+AGG | 0.540644 | 2_2:+50985306 | None:intergenic |
| TATGAGAACTCTTAAACCAT+GGG | 0.540675 | 2_2:+50987194 | None:intergenic |
| ACCACTGGATTCACCAAACA+AGG | 0.540988 | 2_2:+50987150 | None:intergenic |
| AGTCTGAATCTGAAGATTGG+AGG | 0.542135 | 2_2:+50985255 | None:intergenic |
| AGTCTGAATCTGAAGATTGG+AGG | 0.542135 | 2_2:+50985348 | None:intergenic |
| GATGACCTACAGAGTGGTAG+TGG | 0.542499 | 2_2:+50986223 | None:intergenic |
| ACAGGCACAATTTGATAATG+TGG | 0.542504 | 2_2:-50987449 | Msa0256290:CDS |
| GTGTCTTGGTGAATTGGAGG+AGG | 0.544036 | 2_2:+50988943 | None:intergenic |
| TCTGCCAGAGCTGGACGTGA+TGG | 0.544561 | 2_2:-50987121 | Msa0256290:CDS |
| GACTCCTCAGATTCAGACTC+AGG | 0.544630 | 2_2:-50985236 | Msa0256290:CDS |
| AATTATCTGAAAACATATGA+AGG | 0.547544 | 2_2:+50987500 | None:intergenic |
| AAGAATCAGATGTGGACTCC+AGG | 0.548347 | 2_2:-50986132 | Msa0256290:CDS |
| GAAAGTGCTAAGAAGGGAGC+TGG | 0.548826 | 2_2:-50987283 | Msa0256290:CDS |
| AAGAAAAGACCATCATGGTA+AGG | 0.550564 | 2_2:+50986390 | None:intergenic |
| GAGTAGAACCAAACCTTAGG+AGG | 0.550750 | 2_2:+50985925 | None:intergenic |
| TTACGGTGATCAACAAATTG+TGG | 0.551864 | 2_2:-50987736 | Msa0256290:intron |
| GACTCCTCAGATTCAGACTC+CGG | 0.553608 | 2_2:-50985287 | Msa0256290:CDS |
| CACCGGAGTCTGAAAATTGG+AGG | 0.553786 | 2_2:+50985204 | None:intergenic |
| CGTCAATGTCAATTACATCA+TGG | 0.554105 | 2_2:+50987850 | None:intergenic |
| TGTAGCATTGTCGAAACACC+TGG | 0.555413 | 2_2:+50986114 | None:intergenic |
| CCAAGGTTCTGGTCCATCGT+TGG | 0.555974 | 2_2:-50987536 | Msa0256290:CDS |
| GTCTGAATCTGAAGATTGGA+GGG | 0.557648 | 2_2:+50985256 | None:intergenic |
| GTCTGAATCTGAAGATTGGA+GGG | 0.557648 | 2_2:+50985349 | None:intergenic |
| GATTCACCAAACAAGGGCTC+AGG | 0.561525 | 2_2:+50987157 | None:intergenic |
| AGTGGCTCATCAAGGGGTGA+AGG | 0.561664 | 2_2:-50986018 | Msa0256290:CDS |
| AGATTGGAGGGATGAAGCAC+CGG | 0.561933 | 2_2:+50985268 | None:intergenic |
| ACATAACTCAATCAATGTTG+AGG | 0.562622 | 2_2:-50987560 | Msa0256290:CDS |
| GGGGTACATTGGGATATTCA+GGG | 0.565638 | 2_2:+50986349 | None:intergenic |
| TGTGATAAGAAATCCTCCTA+AGG | 0.566453 | 2_2:-50985938 | Msa0256290:intron |
| AGATTGGAGGGATGAAGGAC+CGG | 0.567786 | 2_2:+50985361 | None:intergenic |
| CGAGAGAGGAAGGTTGTACA+TGG | 0.570213 | 2_2:+50985165 | None:intergenic |
| GGCACTTGAAACCATTCATG+AGG | 0.577150 | 2_2:-50987760 | Msa0256290:CDS |
| AGGAAGGTTGTACATGGCAC+CGG | 0.577844 | 2_2:+50985171 | None:intergenic |
| GAGGAATGAAACTGAATCTG+AGG | 0.579337 | 2_2:+50985325 | None:intergenic |
| GCTGTGATTATTGGAGCAGA+AGG | 0.581801 | 2_2:-50986417 | Msa0256290:CDS |
| TTGTTGCCAAAACCTTTCCA+AGG | 0.583357 | 2_2:-50987394 | Msa0256290:CDS |
| AATGGATCATCGCATCCTCT+GGG | 0.584712 | 2_2:-50987232 | Msa0256290:CDS |
| TGAGTGATTGTAAAACCTGA+GGG | 0.587825 | 2_2:+50987085 | None:intergenic |
| GGGTACATTGGGATATTCAG+GGG | 0.590135 | 2_2:+50986350 | None:intergenic |
| GCCTCAGTCTACTTAACACC+TGG | 0.593269 | 2_2:-50986164 | Msa0256290:CDS |
| AGCACCTGAGTCTGAATCTG+AGG | 0.596002 | 2_2:+50985232 | None:intergenic |
| GGATCTACCGACTGGAATTG+AGG | 0.596034 | 2_2:-50987428 | Msa0256290:CDS |
| TGAATATCCCAATGTACCCC+CGG | 0.596754 | 2_2:-50986346 | Msa0256290:intron |
| TAAGCAGAATCCAAAGAGCT+GGG | 0.598645 | 2_2:-50986862 | Msa0256290:intron |
| GAGAATCTTCGAATCAAGGA+TGG | 0.598664 | 2_2:-50986451 | Msa0256290:CDS |
| GTGGCTCATCAAGGGGTGAA+GGG | 0.599339 | 2_2:-50986017 | Msa0256290:CDS |
| ACACGGCACCCGAGAGAGGA+AGG | 0.599897 | 2_2:+50985155 | None:intergenic |
| ACTACCACTCTGTAGGTCAT+CGG | 0.600894 | 2_2:-50986221 | Msa0256290:CDS |
| GATAATGTGGATCTACCGAC+TGG | 0.601717 | 2_2:-50987436 | Msa0256290:CDS |
| AAGGTTGTACATGGCACCGG+AGG | 0.603096 | 2_2:+50985174 | None:intergenic |
| GGTACATTGGGATATTCAGG+GGG | 0.603319 | 2_2:+50986351 | None:intergenic |
| GAAGGGACTCCTTACCATGA+TGG | 0.604625 | 2_2:-50986399 | Msa0256290:CDS |
| CATAACTACATGAGTGGTCA+AGG | 0.605574 | 2_2:-50985097 | Msa0256290:CDS |
| AAAACTTCGAAGTTTCCTCA+GGG | 0.608416 | 2_2:+50987045 | None:intergenic |
| ACACAGTACTGGAGGGAGGA+AGG | 0.614983 | 2_2:+50985128 | None:intergenic |
| ACCAAACAAGGGCTCAGGAG+TGG | 0.615387 | 2_2:+50987162 | None:intergenic |
| ACCGGAGTCTGAAAATTGGA+GGG | 0.618951 | 2_2:+50985205 | None:intergenic |
| CCTGGATATGCATCTTTGAG+TGG | 0.618959 | 2_2:-50986036 | Msa0256290:CDS |
| TGGACGTGATGGAGCAGCTG+TGG | 0.619742 | 2_2:-50987110 | Msa0256290:CDS |
| GCATAGAATTAGGAAACCCA+TGG | 0.619918 | 2_2:-50987210 | Msa0256290:CDS |
| TATCCAGGTTCATTGAAGCA+AGG | 0.620198 | 2_2:+50986051 | None:intergenic |
| CTGTGATTATTGGAGCAGAA+GGG | 0.626963 | 2_2:-50986416 | Msa0256290:CDS |
| AGCACCGGAGTCTGAATCTG+AGG | 0.626973 | 2_2:+50985283 | None:intergenic |
| ATGAGTGATTGTAAAACCTG+AGG | 0.627004 | 2_2:+50987084 | None:intergenic |
| TTGTACACGGCACCCGAGAG+AGG | 0.627050 | 2_2:+50985151 | None:intergenic |
| TCGTAAACGTCATAAGGGGA+AGG | 0.627456 | 2_2:-50987781 | Msa0256290:CDS |
| AAAGTCCACTACCACTCTGT+AGG | 0.627992 | 2_2:-50986228 | Msa0256290:CDS |
| CGATGAAGCTGCCATATTTG+GGG | 0.631883 | 2_2:-50987312 | Msa0256290:CDS |
| ATTGAGTTATGTGATACTGA+AGG | 0.632211 | 2_2:+50987571 | None:intergenic |
| TTGAGCGAAAGAGTGAGTGA+AGG | 0.633504 | 2_2:+50989024 | None:intergenic |
| CGAGTTGTACACAGTACTGG+AGG | 0.638371 | 2_2:+50985120 | None:intergenic |
| CCCTTGTTTGGTGAATCCAG+TGG | 0.638792 | 2_2:-50987151 | Msa0256290:CDS |
| TAGTCATTATTGGCCAACGA+TGG | 0.639198 | 2_2:+50987523 | None:intergenic |
| AACTCGCATAACTACATGAG+TGG | 0.640238 | 2_2:-50985103 | Msa0256290:CDS |
| TAAATCGTAAACGTCATAAG+GGG | 0.643914 | 2_2:-50987785 | Msa0256290:CDS |
| TCTTTGAGTGGCTCATCAAG+GGG | 0.648614 | 2_2:-50986024 | Msa0256290:CDS |
| GCACTTGAAACCATTCATGA+GGG | 0.658315 | 2_2:-50987759 | Msa0256290:CDS |
| ATACATTCATTCTTTCAGTG+AGG | 0.659487 | 2_2:-50985972 | Msa0256290:CDS |
| CTGGCGACAAGAATCAGATG+TGG | 0.660040 | 2_2:-50986140 | Msa0256290:CDS |
| AGGTTGTACATGGCACCGGA+GGG | 0.668663 | 2_2:+50985175 | None:intergenic |
| CAATTTGAAAGTGCTAAGAA+GGG | 0.678255 | 2_2:-50987289 | Msa0256290:CDS |
| GGAGGGAGGAAGGTTGTACA+CGG | 0.684181 | 2_2:+50985138 | None:intergenic |
| AGGTTCTAGTCTCCATACAA+GGG | 0.698032 | 2_2:-50986092 | Msa0256290:CDS |
| ACCAGGTGTTAAGTAGACTG+AGG | 0.707733 | 2_2:+50986163 | None:intergenic |
| TTTCCTAATTCTATGCCCAG+AGG | 0.709280 | 2_2:+50987217 | None:intergenic |
| TTGTACACAGTACTGGAGGG+AGG | 0.713040 | 2_2:+50985124 | None:intergenic |
| GAGTTGTACACAGTACTGGA+GGG | 0.714547 | 2_2:+50985121 | None:intergenic |
| AAAGGCGCCTCAATTCCAGT+CGG | 0.718101 | 2_2:+50987421 | None:intergenic |
| AACCCGAAAATGAAACCCTG+AGG | 0.725477 | 2_2:-50987060 | Msa0256290:CDS |
| CCACTGGATTCACCAAACAA+GGG | 0.727648 | 2_2:+50987151 | None:intergenic |
| TAAGCCGATGACCTACAGAG+TGG | 0.764427 | 2_2:+50986217 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTAAATTCTTAATCA+TGG | - | chr2_2:50985382-50985401 | Msa0256290:intron | 10.0% |
| !! | TTTATTAAATTCTTAATCAT+GGG | - | chr2_2:50985383-50985402 | Msa0256290:intron | 10.0% |
| !!! | TTTAGTATTCAATTTAATTT+TGG | - | chr2_2:50987394-50987413 | Msa0256290:CDS | 10.0% |
| !! | TATAAAATAAATGAAGCTTA+TGG | + | chr2_2:50986179-50986198 | None:intergenic | 15.0% |
| !!! | TATGTTTTCAGATAATTATA+TGG | - | chr2_2:50986627-50986646 | Msa0256290:intron | 15.0% |
| !! | AAAGAAAAAAATCAAAGAAA+TGG | + | chr2_2:50987625-50987644 | None:intergenic | 15.0% |
| !! | ATTGAAAAGTTTGATTGAAT+AGG | + | chr2_2:50985250-50985269 | None:intergenic | 20.0% |
| !!! | TTTTTTATTAAGTTCTTGTG+TGG | - | chr2_2:50985289-50985308 | Msa0256290:CDS | 20.0% |
| !!! | TTTTTATTAAGTTCTTGTGT+GGG | - | chr2_2:50985290-50985309 | Msa0256290:CDS | 20.0% |
| !! | AACAACAAAAATAATGATCA+TGG | + | chr2_2:50985506-50985525 | None:intergenic | 20.0% |
| !! | TTATATTGTGAGAATATGAA+TGG | - | chr2_2:50985612-50985631 | Msa0256290:intron | 20.0% |
| !!! | TGGTTTTAAATATGATTTAG+AGG | - | chr2_2:50985632-50985651 | Msa0256290:intron | 20.0% |
| !! | AACAAACGATTATTATTTGT+TGG | + | chr2_2:50986233-50986252 | None:intergenic | 20.0% |
| !! | GATGATGATTTAATGATAAT+TGG | - | chr2_2:50986308-50986327 | Msa0256290:intron | 20.0% |
| !!! | ATGATATAGTCATTTAAAGT+TGG | + | chr2_2:50986428-50986447 | None:intergenic | 20.0% |
| !! | AATTATCTGAAAACATATGA+AGG | + | chr2_2:50986624-50986643 | None:intergenic | 20.0% |
| !!! | CAGTTCTAATCTTAATTATA+TGG | - | chr2_2:50987215-50987234 | Msa0256290:CDS | 20.0% |
| !! | TTTAATTCAATTCTGACAAA+TGG | - | chr2_2:50987850-50987869 | Msa0256290:CDS | 20.0% |
| !! | TTAATTCAATTCTGACAAAT+GGG | - | chr2_2:50987851-50987870 | Msa0256290:CDS | 20.0% |
| !! | AATCCAAATTTGTATAATTG+TGG | - | chr2_2:50987926-50987945 | Msa0256290:intron | 20.0% |
| !!! | GGAAAAAGATTTTAAATACT+TGG | + | chr2_2:50988373-50988392 | None:intergenic | 20.0% |
| !! | TTTTGTTCCTTTTTTCTTGT+TGG | - | chr2_2:50985331-50985350 | Msa0256290:CDS | 25.0% |
| !!! | TTTGTTCCTTTTTTCTTGTT+GGG | - | chr2_2:50985332-50985351 | Msa0256290:CDS | 25.0% |
| ! | AACTACATAATTCGAGATTA+AGG | + | chr2_2:50985576-50985595 | None:intergenic | 25.0% |
| !!! | TTATGTAGTTGTTTCTTCTT+AGG | - | chr2_2:50985586-50985605 | Msa0256290:intron | 25.0% |
| !!! | ATTGCCAAGGTTTTAAATTA+CGG | + | chr2_2:50985751-50985770 | None:intergenic | 25.0% |
| ! | TGTTGATATGTATGATTTAG+AGG | - | chr2_2:50985806-50985825 | Msa0256290:intron | 25.0% |
| ! | GTTGATATGTATGATTTAGA+GGG | - | chr2_2:50985807-50985826 | Msa0256290:intron | 25.0% |
| ! | AAATTAAACTCTATGGGAAA+TGG | + | chr2_2:50985952-50985971 | None:intergenic | 25.0% |
| !!! | TTTCCCATAGAGTTTAATTT+TGG | - | chr2_2:50985952-50985971 | Msa0256290:CDS | 25.0% |
| ! | GTACCAAAATTAAACTCTAT+GGG | + | chr2_2:50985958-50985977 | None:intergenic | 25.0% |
| ! | TGTACCAAAATTAAACTCTA+TGG | + | chr2_2:50985959-50985978 | None:intergenic | 25.0% |
| ! | ACCAAAACAAAAACAATCAA+TGG | + | chr2_2:50986050-50986069 | None:intergenic | 25.0% |
| ! | ATTTGCTTCATTACAACAAA+GGG | + | chr2_2:50986114-50986133 | None:intergenic | 25.0% |
| !! | AAATGGTACCTTTAGAAATT+AGG | - | chr2_2:50986130-50986149 | Msa0256290:CDS | 25.0% |
| !! | AATGGTACCTTTAGAAATTA+GGG | - | chr2_2:50986131-50986150 | Msa0256290:CDS | 25.0% |
| ! | TAATTTCCCCTAATTTCTAA+AGG | + | chr2_2:50986141-50986160 | None:intergenic | 25.0% |
| ! | TTTAGAAATTAGGGGAAATT+AGG | - | chr2_2:50986140-50986159 | Msa0256290:CDS | 25.0% |
| ! | TTAGAAATTAGGGGAAATTA+GGG | - | chr2_2:50986141-50986160 | Msa0256290:CDS | 25.0% |
| ! | AAAGAAAAAGATAAGACTCT+TGG | + | chr2_2:50986209-50986228 | None:intergenic | 25.0% |
| ! | AATAAATCGTAAACGTCATA+AGG | - | chr2_2:50986334-50986353 | Msa0256290:intron | 25.0% |
| ! | ATAAATCGTAAACGTCATAA+GGG | - | chr2_2:50986335-50986354 | Msa0256290:intron | 25.0% |
| !!! | AAAGCAAAGTCTTCTTTTTT+TGG | - | chr2_2:50986751-50986770 | Msa0256290:intron | 25.0% |
| !!! | TTTTTTTGGCTCAAAAAAAC+AGG | - | chr2_2:50986765-50986784 | Msa0256290:intron | 25.0% |
| ! | TCATTCCATTCAAATTTCAA+TGG | - | chr2_2:50986871-50986890 | Msa0256290:intron | 25.0% |
| ! | ATGATCCATTGAAATTTGAA+TGG | + | chr2_2:50986879-50986898 | None:intergenic | 25.0% |
| ! | ATTACAAGCTATTTAGTATC+AGG | + | chr2_2:50987347-50987366 | None:intergenic | 25.0% |
| ! | CCAATTTCAGAACAAATATA+TGG | + | chr2_2:50987542-50987561 | None:intergenic | 25.0% |
| !!! | CCATATATTTGTTCTGAAAT+TGG | - | chr2_2:50987539-50987558 | Msa0256290:CDS | 25.0% |
| ! | TTGCCACAATTATACAAATT+TGG | + | chr2_2:50987932-50987951 | None:intergenic | 25.0% |
| !! | AGATTTTAAATACTTGGCAA+TGG | + | chr2_2:50988367-50988386 | None:intergenic | 25.0% |
| !! | TTAAAATCTTTTTCCTCTCT+TGG | - | chr2_2:50988378-50988397 | Msa0256290:intron | 25.0% |
| !! | TAAAATCTTTTTCCTCTCTT+GGG | - | chr2_2:50988379-50988398 | Msa0256290:intron | 25.0% |
| !!! | CAACTGATTTAGGTAATTTT+TGG | - | chr2_2:50988409-50988428 | Msa0256290:intron | 25.0% |
| ! | TTGGTTGTTTGGTAAAAAAA+GGG | - | chr2_2:50988527-50988546 | Msa0256290:intron | 25.0% |
| ! | AACATTGTTAATGAGAGTAA+AGG | - | chr2_2:50988553-50988572 | Msa0256290:intron | 25.0% |
| ! | ATCAAAGAGTTTGAAAGAAT+TGG | - | chr2_2:50988628-50988647 | Msa0256290:intron | 25.0% |
| ! | TTTCTTCTTCCTTTTGAATG+GGG | + | chr2_2:50985206-50985225 | None:intergenic | 30.0% |
| ! | GTTTCTTCTTCCTTTTGAAT+GGG | + | chr2_2:50985207-50985226 | None:intergenic | 30.0% |
| CATTCAAAAGGAAGAAGAAA+CGG | - | chr2_2:50985206-50985225 | Msa0256290:CDS | 30.0% | |
| ATTCAAAAGGAAGAAGAAAC+GGG | - | chr2_2:50985207-50985226 | Msa0256290:CDS | 30.0% | |
| GATTGAATAGGAGAATAGAT+AGG | + | chr2_2:50985238-50985257 | None:intergenic | 30.0% | |
| AGAGTCATAAATAACGATCA+TGG | + | chr2_2:50985423-50985442 | None:intergenic | 30.0% | |
| ATGATCGTTATTTATGACTC+TGG | - | chr2_2:50985422-50985441 | Msa0256290:intron | 30.0% | |
| CAAAACTTCAAAGCAGAAAT+TGG | + | chr2_2:50985452-50985471 | None:intergenic | 30.0% | |
| ! | ATTTAAAACCTTGGCAATGT+TGG | - | chr2_2:50985753-50985772 | Msa0256290:intron | 30.0% |
| ! | TTTAAAACCTTGGCAATGTT+GGG | - | chr2_2:50985754-50985773 | Msa0256290:intron | 30.0% |
| TAGTTACACTTTCAGACATA+TGG | - | chr2_2:50985997-50986016 | Msa0256290:CDS | 30.0% | |
| !!! | GCCATTGATTGTTTTTGTTT+TGG | - | chr2_2:50986046-50986065 | Msa0256290:CDS | 30.0% |
| !!! | TGTTTTGGTTTTCGAAATAG+AGG | - | chr2_2:50986061-50986080 | Msa0256290:CDS | 30.0% |
| !!! | GTTTTGGTTTTCGAAATAGA+GGG | - | chr2_2:50986062-50986081 | Msa0256290:CDS | 30.0% |
| !!! | TTTTGGTTTTCGAAATAGAG+GGG | - | chr2_2:50986063-50986082 | Msa0256290:CDS | 30.0% |
| ATTGTTTAAAGAGGTTCCTT+CGG | - | chr2_2:50986086-50986105 | Msa0256290:CDS | 30.0% | |
| CATTTGCTTCATTACAACAA+AGG | + | chr2_2:50986115-50986134 | None:intergenic | 30.0% | |
| ! | CTTTGTTGTAATGAAGCAAA+TGG | - | chr2_2:50986113-50986132 | Msa0256290:CDS | 30.0% |
| ! | ATGGTACCTTTAGAAATTAG+GGG | - | chr2_2:50986132-50986151 | Msa0256290:CDS | 30.0% |
| TAGAAATTAGGGGAAATTAG+GGG | - | chr2_2:50986142-50986161 | Msa0256290:CDS | 30.0% | |
| TCAATTACATCATGGACAAT+GGG | + | chr2_2:50986266-50986285 | None:intergenic | 30.0% | |
| TAAATCGTAAACGTCATAAG+GGG | - | chr2_2:50986336-50986355 | Msa0256290:intron | 30.0% | |
| AAAACAGACGATCTCTTAAA+AGG | + | chr2_2:50986463-50986482 | None:intergenic | 30.0% | |
| AAAAAGTTGGAACAGTTAGT+GGG | - | chr2_2:50986506-50986525 | Msa0256290:intron | 30.0% | |
| ATTGAGTTATGTGATACTGA+AGG | + | chr2_2:50986553-50986572 | None:intergenic | 30.0% | |
| ACATAACTCAATCAATGTTG+AGG | - | chr2_2:50986561-50986580 | Msa0256290:intron | 30.0% | |
| CATAACTCAATCAATGTTGA+GGG | - | chr2_2:50986562-50986581 | Msa0256290:intron | 30.0% | |
| CATATGAAGGTAGTCATTAT+TGG | + | chr2_2:50986611-50986630 | None:intergenic | 30.0% | |
| !! | CAATTTGAAAGTGCTAAGAA+GGG | - | chr2_2:50986832-50986851 | Msa0256290:CDS | 30.0% |
| TATGAGAACTCTTAAACCAT+GGG | + | chr2_2:50986930-50986949 | None:intergenic | 30.0% | |
| TTATGAGAACTCTTAAACCA+TGG | + | chr2_2:50986931-50986950 | None:intergenic | 30.0% | |
| !!! | CAATTTAATTTTGGAGCTGA+TGG | - | chr2_2:50987403-50987422 | Msa0256290:CDS | 30.0% |
| AATTTGGCTATCTTTCAACA+AGG | + | chr2_2:50987499-50987518 | None:intergenic | 30.0% | |
| TTCAGAACAAATATATGGTG+TGG | + | chr2_2:50987537-50987556 | None:intergenic | 30.0% | |
| TGGTCAGATTGAATAATATG+CGG | + | chr2_2:50987605-50987624 | None:intergenic | 30.0% | |
| CAAAAAAGAAAAGACCATCA+TGG | + | chr2_2:50987739-50987758 | None:intergenic | 30.0% | |
| !!! | ACAAATGGGACAATTTTTTG+TGG | - | chr2_2:50987865-50987884 | Msa0256290:intron | 30.0% |
| !!! | CAAATGGGACAATTTTTTGT+GGG | - | chr2_2:50987866-50987885 | Msa0256290:intron | 30.0% |
| !!! | AAATGGGACAATTTTTTGTG+GGG | - | chr2_2:50987867-50987886 | Msa0256290:intron | 30.0% |
| ATACATTCATTCTTTCAGTG+AGG | - | chr2_2:50988149-50988168 | Msa0256290:intron | 30.0% | |
| TATCTACACAAATATCTACG+AGG | - | chr2_2:50988302-50988321 | Msa0256290:intron | 30.0% | |
| ! | AAAATCTTTTTCCTCTCTTG+GGG | - | chr2_2:50988380-50988399 | Msa0256290:intron | 30.0% |
| !! | AATTTTGAAGACCTTGTTGT+GGG | - | chr2_2:50988439-50988458 | Msa0256290:intron | 30.0% |
| GTTGGTTGTTTGGTAAAAAA+AGG | - | chr2_2:50988526-50988545 | Msa0256290:intron | 30.0% | |
| TGGTTGTTTGGTAAAAAAAG+GGG | - | chr2_2:50988528-50988547 | Msa0256290:intron | 30.0% | |
| GTTTGAAAGAATTGGAGTTA+AGG | - | chr2_2:50988636-50988655 | Msa0256290:intron | 30.0% | |
| ! | TTACAGTTTTCGCTTCTTCA+TGG | - | chr2_2:50985135-50985154 | Msa0256290:CDS | 35.0% |
| ! | TTCTTCTTCCTTTTGAATGG+GGG | + | chr2_2:50985205-50985224 | None:intergenic | 35.0% |
| ! | CGTTTCTTCTTCCTTTTGAA+TGG | + | chr2_2:50985208-50985227 | None:intergenic | 35.0% |
| AAGACACCCAACAAGAAAAA+AGG | + | chr2_2:50985341-50985360 | None:intergenic | 35.0% | |
| TGATTGTGGCTGCAAAATTT+AGG | - | chr2_2:50985658-50985677 | Msa0256290:intron | 35.0% | |
| GATTGTGGCTGCAAAATTTA+GGG | - | chr2_2:50985659-50985678 | Msa0256290:intron | 35.0% | |
| ATCAACCTAATCAAGGATCA+TGG | - | chr2_2:50985719-50985738 | Msa0256290:intron | 35.0% | |
| ! | GCAACCGTAATTTAAAACCT+TGG | - | chr2_2:50985744-50985763 | Msa0256290:intron | 35.0% |
| GCATCACTAATTTCACATGT+GGG | + | chr2_2:50985781-50985800 | None:intergenic | 35.0% | |
| AGCATCACTAATTTCACATG+TGG | + | chr2_2:50985782-50985801 | None:intergenic | 35.0% | |
| TGTATGATTTAGAGGGATTG+AGG | - | chr2_2:50985814-50985833 | Msa0256290:intron | 35.0% | |
| !! | TTTTGTTGTGGTAGCAACTT+GGG | - | chr2_2:50985846-50985865 | Msa0256290:intron | 35.0% |
| ! | ATGGCTGGTGATAGTTTTTA+AGG | - | chr2_2:50985884-50985903 | Msa0256290:intron | 35.0% |
| TCTCATCTTCTGATTGTGAT+AGG | - | chr2_2:50986024-50986043 | Msa0256290:CDS | 35.0% | |
| ATAGAGGGGATTGTTTAAAG+AGG | - | chr2_2:50986077-50986096 | Msa0256290:CDS | 35.0% | |
| GTCAATTACATCATGGACAA+TGG | + | chr2_2:50986267-50986286 | None:intergenic | 35.0% | |
| CGTCAATGTCAATTACATCA+TGG | + | chr2_2:50986274-50986293 | None:intergenic | 35.0% | |
| TTACGGTGATCAACAAATTG+TGG | - | chr2_2:50986385-50986404 | Msa0256290:CDS | 35.0% | |
| GAAAAAGTTGGAACAGTTAG+TGG | - | chr2_2:50986505-50986524 | Msa0256290:intron | 35.0% | |
| !! | ACAGGCACAATTTGATAATG+TGG | - | chr2_2:50986672-50986691 | Msa0256290:intron | 35.0% |
| !! | GGTTTTGGCAACAATGTAAA+AGG | + | chr2_2:50986721-50986740 | None:intergenic | 35.0% |
| AAGAAGACTTTGCTTTACCT+TGG | + | chr2_2:50986747-50986766 | None:intergenic | 35.0% | |
| CTTTCAAATTGCCCCAAATA+TGG | + | chr2_2:50986823-50986842 | None:intergenic | 35.0% | |
| !! | GCAATTTGAAAGTGCTAAGA+AGG | - | chr2_2:50986831-50986850 | Msa0256290:CDS | 35.0% |
| TGAGTGATTGTAAAACCTGA+GGG | + | chr2_2:50987039-50987058 | None:intergenic | 35.0% | |
| ATGAGTGATTGTAAAACCTG+AGG | + | chr2_2:50987040-50987059 | None:intergenic | 35.0% | |
| ! | TTTCCTCAGGGTTTCATTTT+CGG | + | chr2_2:50987067-50987086 | None:intergenic | 35.0% |
| AAAACTTCGAAGTTTCCTCA+GGG | + | chr2_2:50987079-50987098 | None:intergenic | 35.0% | |
| TAAAACTTCGAAGTTTCCTC+AGG | + | chr2_2:50987080-50987099 | None:intergenic | 35.0% | |
| CAAAAAACTAACCTGCTTCA+CGG | + | chr2_2:50987160-50987179 | None:intergenic | 35.0% | |
| TTGGATTCTGCTTAGGAAAT+AGG | + | chr2_2:50987253-50987272 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTAGCCCAGCTCTT+TGG | + | chr2_2:50987272-50987291 | None:intergenic | 35.0% |
| CTAAAAAAATCCAGGAAGAG+TGG | - | chr2_2:50987282-50987301 | Msa0256290:CDS | 35.0% | |
| ATGTGATTGACGATATGACA+TGG | + | chr2_2:50987375-50987394 | None:intergenic | 35.0% | |
| ! | ATAGCCAAATTTTTCCTCGA+TGG | - | chr2_2:50987508-50987527 | Msa0256290:CDS | 35.0% |
| GGTCAGATTGAATAATATGC+GGG | + | chr2_2:50987604-50987623 | None:intergenic | 35.0% | |
| TTGTGAGAATCTTCGAATCA+AGG | - | chr2_2:50987666-50987685 | Msa0256290:intron | 35.0% | |
| AAGAAAAGACCATCATGGTA+AGG | + | chr2_2:50987734-50987753 | None:intergenic | 35.0% | |
| ! | ATTCAAGATTAGCCCTTGTA+TGG | + | chr2_2:50988044-50988063 | None:intergenic | 35.0% |
| TGTGATAAGAAATCCTCCTA+AGG | - | chr2_2:50988183-50988202 | Msa0256290:intron | 35.0% | |
| TAAGAAATCCTCCTAAGGTT+TGG | - | chr2_2:50988188-50988207 | Msa0256290:intron | 35.0% | |
| TCTACGAGGTGATATATGAT+TGG | - | chr2_2:50988316-50988335 | Msa0256290:intron | 35.0% | |
| !! | GAATTTTGAAGACCTTGTTG+TGG | - | chr2_2:50988438-50988457 | Msa0256290:intron | 35.0% |
| !! | ATTTTGAAGACCTTGTTGTG+GGG | - | chr2_2:50988440-50988459 | Msa0256290:intron | 35.0% |
| GAGGTCATGTAAATCATACA+CGG | - | chr2_2:50988492-50988511 | Msa0256290:intron | 35.0% | |
| TCATGTAAATCATACACGGA+AGG | - | chr2_2:50988496-50988515 | Msa0256290:intron | 35.0% | |
| AGTAAAGGAAAATGCTCAGA+TGG | - | chr2_2:50988568-50988587 | Msa0256290:intron | 35.0% | |
| ! | GGATTTAAGTCTGGTTTAGT+TGG | - | chr2_2:50988589-50988608 | Msa0256290:intron | 35.0% |
| ! | AAAACCCAATTTTCAGACTC+CGG | - | chr2_2:50988741-50988760 | Msa0256290:intron | 35.0% |
| TGATTTAGAGGCTGTGATTG+TGG | - | chr2_2:50985644-50985663 | Msa0256290:intron | 40.0% | |
| !!! | AGGCTATGTGAGTTTTGTTG+TGG | - | chr2_2:50985834-50985853 | Msa0256290:intron | 40.0% |
| !! | GTTTTGTTGTGGTAGCAACT+TGG | - | chr2_2:50985845-50985864 | Msa0256290:intron | 40.0% |
| ATTACAACAAAGGGAACCGA+AGG | + | chr2_2:50986105-50986124 | None:intergenic | 40.0% | |
| GCACTTGAAACCATTCATGA+GGG | - | chr2_2:50986362-50986381 | Msa0256290:CDS | 40.0% | |
| GAAACCATTCATGAGGGTTA+CGG | - | chr2_2:50986368-50986387 | Msa0256290:CDS | 40.0% | |
| !!! | GTTTTTGCTTTTTTGCAGCC+TGG | - | chr2_2:50986478-50986497 | Msa0256290:intron | 40.0% |
| TAGTCATTATTGGCCAACGA+TGG | + | chr2_2:50986601-50986620 | None:intergenic | 40.0% | |
| ! | AGACGAGTACGCTTTATTAC+AGG | - | chr2_2:50986654-50986673 | Msa0256290:intron | 40.0% |
| TTGTTGCCAAAACCTTTCCA+AGG | - | chr2_2:50986727-50986746 | Msa0256290:intron | 40.0% | |
| ! | GCTTTACCTTGGAAAGGTTT+TGG | + | chr2_2:50986736-50986755 | None:intergenic | 40.0% |
| GACTTTGCTTTACCTTGGAA+AGG | + | chr2_2:50986742-50986761 | None:intergenic | 40.0% | |
| TTTCCTAATTCTATGCCCAG+AGG | + | chr2_2:50986907-50986926 | None:intergenic | 40.0% | |
| GCATAGAATTAGGAAACCCA+TGG | - | chr2_2:50986911-50986930 | Msa0256290:intron | 40.0% | |
| ! | TTCCTCAGGGTTTCATTTTC+GGG | + | chr2_2:50987066-50987085 | None:intergenic | 40.0% |
| AAATAATTGCTCCGTGAAGC+AGG | - | chr2_2:50987146-50987165 | Msa0256290:CDS | 40.0% | |
| TAAGCAGAATCCAAAGAGCT+GGG | - | chr2_2:50987259-50987278 | Msa0256290:CDS | 40.0% | |
| TCAGGAATACTAAACTCACC+CGG | + | chr2_2:50987329-50987348 | None:intergenic | 40.0% | |
| GACACCATCGAGGAAAAATT+TGG | + | chr2_2:50987515-50987534 | None:intergenic | 40.0% | |
| TTGAATAATATGCGGGAAGC+AGG | + | chr2_2:50987597-50987616 | None:intergenic | 40.0% | |
| GAGAATCTTCGAATCAAGGA+TGG | - | chr2_2:50987670-50987689 | Msa0256290:intron | 40.0% | |
| CTCATGAGAGCTGTGATTAT+TGG | - | chr2_2:50987695-50987714 | Msa0256290:intron | 40.0% | |
| CTGTGATTATTGGAGCAGAA+GGG | - | chr2_2:50987705-50987724 | Msa0256290:intron | 40.0% | |
| AAGTATTCTCAACCACGTAC+CGG | + | chr2_2:50987797-50987816 | None:intergenic | 40.0% | |
| ! | AGGTTCTAGTCTCCATACAA+GGG | - | chr2_2:50988029-50988048 | Msa0256290:intron | 40.0% |
| TATCCAGGTTCATTGAAGCA+AGG | + | chr2_2:50988073-50988092 | None:intergenic | 40.0% | |
| ATCTTTGAGTGGCTCATCAA+GGG | - | chr2_2:50988096-50988115 | Msa0256290:intron | 40.0% | |
| CAAGAGTAGAACCAAACCTT+AGG | + | chr2_2:50988202-50988221 | None:intergenic | 40.0% | |
| !! | CTAAGGTTTGGTTCTACTCT+TGG | - | chr2_2:50988200-50988219 | Msa0256290:intron | 40.0% |
| !! | AGGTGTTCAAGTTGGTTGTT+TGG | - | chr2_2:50988516-50988535 | Msa0256290:intron | 40.0% |
| ! | TGCTCAGATGGATTTAAGTC+TGG | - | chr2_2:50988580-50988599 | Msa0256290:intron | 40.0% |
| TGACCACTGATGTAGTTATG+CGG | + | chr2_2:50988706-50988725 | None:intergenic | 40.0% | |
| CATAACTACATCAGTGGTCA+AGG | - | chr2_2:50988706-50988725 | Msa0256290:intron | 40.0% | |
| GTCTGAATCTGAAGATTGGA+GGG | + | chr2_2:50988775-50988794 | None:intergenic | 40.0% | |
| AGTCTGAATCTGAAGATTGG+AGG | + | chr2_2:50988776-50988795 | None:intergenic | 40.0% | |
| AGGAGTCTGAATCTGAAGAT+TGG | + | chr2_2:50988779-50988798 | None:intergenic | 40.0% | |
| GAGGAATGAAACTGAATCTG+AGG | + | chr2_2:50988799-50988818 | None:intergenic | 40.0% | |
| AGTCTGAATCTGAAGATTGG+AGG | + | chr2_2:50988776-50988795 | None:intergenic | 40.0% | |
| AGGAGTCTGAATCTGAAGAT+TGG | + | chr2_2:50988779-50988798 | None:intergenic | 40.0% | |
| GTCTGAATCTGAAGATTGGA+GGG | + | chr2_2:50988775-50988794 | None:intergenic | 40.0% | |
| AGTCTGAATCTGAAGATTGG+AGG | + | chr2_2:50988776-50988795 | None:intergenic | 40.0% | |
| AGGAGTCTGAATCTGAAGAT+TGG | + | chr2_2:50988779-50988798 | None:intergenic | 40.0% | |
| AACTCGCATAACTACATGAG+TGG | - | chr2_2:50989018-50989037 | Msa0256290:five_prime_UTR | 40.0% | |
| CATAACTACATGAGTGGTCA+AGG | - | chr2_2:50989024-50989043 | Msa0256290:five_prime_UTR | 40.0% | |
| TTGAGCGAAAGAGTGAGTGA+AGG | + | chr2_2:50985100-50985119 | None:intergenic | 45.0% | |
| CACTCACTCTTTCGCTCAAA+AGG | - | chr2_2:50985101-50985120 | Msa0256290:CDS | 45.0% | |
| GGAGGAATTTCAACAACGTC+AGG | + | chr2_2:50985163-50985182 | None:intergenic | 45.0% | |
| !! | TTTTGAATGGGGGTGTGTCT+TGG | + | chr2_2:50985195-50985214 | None:intergenic | 45.0% |
| AAGACACACCCCCATTCAAA+AGG | - | chr2_2:50985194-50985213 | Msa0256290:CDS | 45.0% | |
| TGCAGCCATGATCCTTGATT+AGG | + | chr2_2:50985727-50985746 | None:intergenic | 45.0% | |
| TGGGAGTGGAATGGTGTTTA+TGG | - | chr2_2:50985865-50985884 | Msa0256290:intron | 45.0% | |
| AGTGGAATGGTGTTTATGGC+TGG | - | chr2_2:50985869-50985888 | Msa0256290:intron | 45.0% | |
| TCGTAAACGTCATAAGGGGA+AGG | - | chr2_2:50986340-50986359 | Msa0256290:intron | 45.0% | |
| GGCACTTGAAACCATTCATG+AGG | - | chr2_2:50986361-50986380 | Msa0256290:CDS | 45.0% | |
| ATCACCGTAACCCTCATGAA+TGG | + | chr2_2:50986375-50986394 | None:intergenic | 45.0% | |
| !! | GTTCCAACTTTTTCCAAGCC+AGG | + | chr2_2:50986499-50986518 | None:intergenic | 45.0% |
| TCAATCAATGTTGAGGGCCA+AGG | - | chr2_2:50986568-50986587 | Msa0256290:intron | 45.0% | |
| GATAATGTGGATCTACCGAC+TGG | - | chr2_2:50986685-50986704 | Msa0256290:intron | 45.0% | |
| TGCGATGAAGCTGCCATATT+TGG | - | chr2_2:50986807-50986826 | Msa0256290:intron | 45.0% | |
| GCGATGAAGCTGCCATATTT+GGG | - | chr2_2:50986808-50986827 | Msa0256290:intron | 45.0% | |
| CGATGAAGCTGCCATATTTG+GGG | - | chr2_2:50986809-50986828 | Msa0256290:intron | 45.0% | |
| AATGGATCATCGCATCCTCT+GGG | - | chr2_2:50986889-50986908 | Msa0256290:intron | 45.0% | |
| CATCCTCTGGGCATAGAATT+AGG | - | chr2_2:50986901-50986920 | Msa0256290:intron | 45.0% | |
| CCACTGGATTCACCAAACAA+GGG | + | chr2_2:50986973-50986992 | None:intergenic | 45.0% | |
| ACCACTGGATTCACCAAACA+AGG | + | chr2_2:50986974-50986993 | None:intergenic | 45.0% | |
| AACCCGAAAATGAAACCCTG+AGG | - | chr2_2:50987061-50987080 | Msa0256290:CDS | 45.0% | |
| CAGCTCTTTGGATTCTGCTT+AGG | + | chr2_2:50987260-50987279 | None:intergenic | 45.0% | |
| CTAAGCAGAATCCAAAGAGC+TGG | - | chr2_2:50987258-50987277 | Msa0256290:CDS | 45.0% | |
| GAGCTGGGCTAAAAAAATCC+AGG | - | chr2_2:50987274-50987293 | Msa0256290:CDS | 45.0% | |
| CCAAAATCTTCCACTCTTCC+TGG | + | chr2_2:50987295-50987314 | None:intergenic | 45.0% | |
| ! | CCAGGAAGAGTGGAAGATTT+TGG | - | chr2_2:50987292-50987311 | Msa0256290:CDS | 45.0% |
| ! | GGAAGAGTGGAAGATTTTGG+AGG | - | chr2_2:50987295-50987314 | Msa0256290:CDS | 45.0% |
| !!! | GATTTTGGAGGAGCATTTGC+CGG | - | chr2_2:50987307-50987326 | Msa0256290:CDS | 45.0% |
| !!! | ATTTTGGAGGAGCATTTGCC+GGG | - | chr2_2:50987308-50987327 | Msa0256290:CDS | 45.0% |
| !! | AGCTGATGGACTTTACCACA+TGG | - | chr2_2:50987417-50987436 | Msa0256290:CDS | 45.0% |
| ! | GATGGACTTTACCACATGGT+AGG | - | chr2_2:50987421-50987440 | Msa0256290:CDS | 45.0% |
| TAGTTCCCGTCTTATCGCAA+GGG | - | chr2_2:50987446-50987465 | Msa0256290:CDS | 45.0% | |
| GGGAAGCAGGTTTGACATTA+TGG | + | chr2_2:50987584-50987603 | None:intergenic | 45.0% | |
| GCTGTGATTATTGGAGCAGA+AGG | - | chr2_2:50987704-50987723 | Msa0256290:intron | 45.0% | |
| GGTACATTGGGATATTCAGG+GGG | + | chr2_2:50987773-50987792 | None:intergenic | 45.0% | |
| GGGTACATTGGGATATTCAG+GGG | + | chr2_2:50987774-50987793 | None:intergenic | 45.0% | |
| GGGGTACATTGGGATATTCA+GGG | + | chr2_2:50987775-50987794 | None:intergenic | 45.0% | |
| TGAATATCCCAATGTACCCC+CGG | - | chr2_2:50987775-50987794 | Msa0256290:CDS | 45.0% | |
| AGTATTCTCAACCACGTACC+GGG | + | chr2_2:50987796-50987815 | None:intergenic | 45.0% | |
| AAAGTCCACTACCACTCTGT+AGG | - | chr2_2:50987893-50987912 | Msa0256290:intron | 45.0% | |
| ACTACCACTCTGTAGGTCAT+CGG | - | chr2_2:50987900-50987919 | Msa0256290:intron | 45.0% | |
| ACCAGGTGTTAAGTAGACTG+AGG | + | chr2_2:50987961-50987980 | None:intergenic | 45.0% | |
| AGTCTACTTAACACCTGGTC+TGG | - | chr2_2:50987962-50987981 | Msa0256290:intron | 45.0% | |
| AAGAATCAGATGTGGACTCC+AGG | - | chr2_2:50987989-50988008 | Msa0256290:intron | 45.0% | |
| TGTAGCATTGTCGAAACACC+TGG | + | chr2_2:50988010-50988029 | None:intergenic | 45.0% | |
| AGGTGTTTCGACAATGCTAC+AGG | - | chr2_2:50988009-50988028 | Msa0256290:intron | 45.0% | |
| ! | CAGGTTCTAGTCTCCATACA+AGG | - | chr2_2:50988028-50988047 | Msa0256290:intron | 45.0% |
| AAGCCTTGCTTCAATGAACC+TGG | - | chr2_2:50988067-50988086 | Msa0256290:intron | 45.0% | |
| CCACTCAAAGATGCATATCC+AGG | + | chr2_2:50988088-50988107 | None:intergenic | 45.0% | |
| CCTGGATATGCATCTTTGAG+TGG | - | chr2_2:50988085-50988104 | Msa0256290:intron | 45.0% | |
| CATCTTTGAGTGGCTCATCA+AGG | - | chr2_2:50988095-50988114 | Msa0256290:intron | 45.0% | |
| TCTTTGAGTGGCTCATCAAG+GGG | - | chr2_2:50988097-50988116 | Msa0256290:intron | 45.0% | |
| GAGTAGAACCAAACCTTAGG+AGG | + | chr2_2:50988199-50988218 | None:intergenic | 45.0% | |
| ! | GGGGTTCAAGCAACTGATTT+AGG | - | chr2_2:50988399-50988418 | Msa0256290:intron | 45.0% |
| TGTAGAAATGCCCCACAACA+AGG | + | chr2_2:50988453-50988472 | None:intergenic | 45.0% | |
| GCAGAGCACATGATATCATG+AGG | - | chr2_2:50988473-50988492 | Msa0256290:intron | 45.0% | |
| !! | TACACGGAAGGTGTTCAAGT+TGG | - | chr2_2:50988508-50988527 | Msa0256290:intron | 45.0% |
| GACCACTGATGTAGTTATGC+GGG | + | chr2_2:50988705-50988724 | None:intergenic | 45.0% | |
| AGGACCGGAGTCTGAAAATT+GGG | + | chr2_2:50988748-50988767 | None:intergenic | 45.0% | |
| AAGGACCGGAGTCTGAAAAT+TGG | + | chr2_2:50988749-50988768 | None:intergenic | 45.0% | |
| TCTGAAGATTGGAGGGATGA+AGG | + | chr2_2:50988768-50988787 | None:intergenic | 45.0% | |
| ! | TCCCTCCAATTTTCAGACTC+CGG | - | chr2_2:50988915-50988934 | Msa0256290:CDS | 45.0% |
| ACCGGAGTCTGAAAATTGGA+GGG | + | chr2_2:50988919-50988938 | None:intergenic | 45.0% | |
| !! | AAGCACCGGAGTCTGAAAAT+TGG | + | chr2_2:50988923-50988942 | None:intergenic | 45.0% |
| CATGTACAACCTTCCTCTCT+CGG | - | chr2_2:50988957-50988976 | Msa0256290:CDS | 45.0% | |
| ATGTACAACCTTCCTCTCTC+GGG | - | chr2_2:50988958-50988977 | Msa0256290:CDS | 45.0% | |
| ! | GAGTTGTACACAGTACTGGA+GGG | + | chr2_2:50989003-50989022 | None:intergenic | 45.0% |
| ATGCGAGTTGTACACAGTAC+TGG | + | chr2_2:50989007-50989026 | None:intergenic | 45.0% | |
| !!! | AATTATTTTTAATAAAGTAA+TGG | + | chr2_2:50987134-50987153 | None:intergenic | 5.0% |
| ! | AGTGAGTGAAGGTTTTGCGC+GGG | + | chr2_2:50985089-50985108 | None:intergenic | 50.0% |
| ! | GAGTGAGTGAAGGTTTTGCG+CGG | + | chr2_2:50985090-50985109 | None:intergenic | 50.0% |
| GTGTCTTGGTGAATTGGAGG+AGG | + | chr2_2:50985181-50985200 | None:intergenic | 50.0% | |
| GGTGTGTCTTGGTGAATTGG+AGG | + | chr2_2:50985184-50985203 | None:intergenic | 50.0% | |
| TGCAGTTGCGATCGCAATTG+CGG | - | chr2_2:50985692-50985711 | Msa0256290:intron | 50.0% | |
| CGGCAGCATCAACCTAATCA+AGG | - | chr2_2:50985712-50985731 | Msa0256290:intron | 50.0% | |
| TTGTGGTAGCAACTTGGGAG+TGG | - | chr2_2:50985851-50985870 | Msa0256290:intron | 50.0% | |
| GTAGCAACTTGGGAGTGGAA+TGG | - | chr2_2:50985856-50985875 | Msa0256290:intron | 50.0% | |
| !!! | TGCTTTTTTGCAGCCTGGCT+TGG | - | chr2_2:50986483-50986502 | Msa0256290:intron | 50.0% |
| !! | CAGCCTGGCTTGGAAAAAGT+TGG | - | chr2_2:50986493-50986512 | Msa0256290:intron | 50.0% |
| AATGTTGAGGGCCAAGGTTC+TGG | - | chr2_2:50986574-50986593 | Msa0256290:intron | 50.0% | |
| ! | GGATCTACCGACTGGAATTG+AGG | - | chr2_2:50986693-50986712 | Msa0256290:intron | 50.0% |
| !! | AAAGGCGCCTCAATTCCAGT+CGG | + | chr2_2:50986703-50986722 | None:intergenic | 50.0% |
| TATGGCAGCTTCATCGCATC+TGG | + | chr2_2:50986805-50986824 | None:intergenic | 50.0% | |
| !! | GAAAGTGCTAAGAAGGGAGC+TGG | - | chr2_2:50986838-50986857 | Msa0256290:CDS | 50.0% |
| CAATGGATCATCGCATCCTC+TGG | - | chr2_2:50986888-50986907 | Msa0256290:intron | 50.0% | |
| GATTCACCAAACAAGGGCTC+AGG | + | chr2_2:50986967-50986986 | None:intergenic | 50.0% | |
| ! | CCCTTGTTTGGTGAATCCAG+TGG | - | chr2_2:50986970-50986989 | Msa0256290:intron | 50.0% |
| ! | TCTGGCAGATTTGAGACCAC+TGG | + | chr2_2:50986989-50987008 | None:intergenic | 50.0% |
| CTAGTTCCCGTCTTATCGCA+AGG | - | chr2_2:50987445-50987464 | Msa0256290:CDS | 50.0% | |
| AGTTCCCGTCTTATCGCAAG+GGG | - | chr2_2:50987447-50987466 | Msa0256290:CDS | 50.0% | |
| ATATGGTGTGGACACCATCG+AGG | + | chr2_2:50987525-50987544 | None:intergenic | 50.0% | |
| GAAGGGACTCCTTACCATGA+TGG | - | chr2_2:50987722-50987741 | Msa0256290:intron | 50.0% | |
| ! | GGGGGTACATTGGGATATTC+AGG | + | chr2_2:50987776-50987795 | None:intergenic | 50.0% |
| TATTCTCAACCACGTACCGG+GGG | + | chr2_2:50987794-50987813 | None:intergenic | 50.0% | |
| GTATTCTCAACCACGTACCG+GGG | + | chr2_2:50987795-50987814 | None:intergenic | 50.0% | |
| GATGACCTACAGAGTGGTAG+TGG | + | chr2_2:50987901-50987920 | None:intergenic | 50.0% | |
| TAAGCCGATGACCTACAGAG+TGG | + | chr2_2:50987907-50987926 | None:intergenic | 50.0% | |
| GCCTCAGTCTACTTAACACC+TGG | - | chr2_2:50987957-50987976 | Msa0256290:intron | 50.0% | |
| CTGGCGACAAGAATCAGATG+TGG | - | chr2_2:50987981-50988000 | Msa0256290:intron | 50.0% | |
| AGTTGCTTGAACCCCAAGAG+AGG | + | chr2_2:50988394-50988413 | None:intergenic | 50.0% | |
| CACTGATGTAGTTATGCGGG+TGG | + | chr2_2:50988702-50988721 | None:intergenic | 50.0% | |
| CACCCGCATAACTACATCAG+TGG | - | chr2_2:50988700-50988719 | Msa0256290:intron | 50.0% | |
| AGATTGGAGGGATGAAGGAC+CGG | + | chr2_2:50988763-50988782 | None:intergenic | 50.0% | |
| GACTCCTCAGATTCAGACTC+CGG | - | chr2_2:50988834-50988853 | Msa0256290:intron | 50.0% | |
| AGATTGGAGGGATGAAGCAC+CGG | + | chr2_2:50988856-50988875 | None:intergenic | 50.0% | |
| GACTCCTCAGATTCAGACTC+AGG | - | chr2_2:50988834-50988853 | Msa0256290:intron | 50.0% | |
| AGCACCTGAGTCTGAATCTG+AGG | + | chr2_2:50988892-50988911 | None:intergenic | 50.0% | |
| CACCGGAGTCTGAAAATTGG+AGG | + | chr2_2:50988920-50988939 | None:intergenic | 50.0% | |
| AGGAAGGTTGTACATGGCAC+CGG | + | chr2_2:50988953-50988972 | None:intergenic | 50.0% | |
| CGAGAGAGGAAGGTTGTACA+TGG | + | chr2_2:50988959-50988978 | None:intergenic | 50.0% | |
| ! | TTGTACACAGTACTGGAGGG+AGG | + | chr2_2:50989000-50989019 | None:intergenic | 50.0% |
| ! | CGAGTTGTACACAGTACTGG+AGG | + | chr2_2:50989004-50989023 | None:intergenic | 50.0% |
| ! | GTGAGTGAAGGTTTTGCGCG+GGG | + | chr2_2:50985088-50985107 | None:intergenic | 55.0% |
| ! | GGGGGTGTGTCTTGGTGAAT+TGG | + | chr2_2:50985187-50985206 | None:intergenic | 55.0% |
| TGTGGGTCCCAACATTGCCA+AGG | + | chr2_2:50985764-50985783 | None:intergenic | 55.0% | |
| CCAACGATGGACCAGAACCT+TGG | + | chr2_2:50986588-50986607 | None:intergenic | 55.0% | |
| ! | CCAAGGTTCTGGTCCATCGT+TGG | - | chr2_2:50986585-50986604 | Msa0256290:intron | 55.0% |
| ACCAAACAAGGGCTCAGGAG+TGG | + | chr2_2:50986962-50986981 | None:intergenic | 55.0% | |
| GGTCTCAAATCTGCCAGAGC+TGG | - | chr2_2:50986991-50987010 | Msa0256290:CDS | 55.0% | |
| CGGGAACTAGACCTACCATG+TGG | + | chr2_2:50987435-50987454 | None:intergenic | 55.0% | |
| GAAGCCCCTTGCGATAAGAC+GGG | + | chr2_2:50987454-50987473 | None:intergenic | 55.0% | |
| CGAAGCCCCTTGCGATAAGA+CGG | + | chr2_2:50987455-50987474 | None:intergenic | 55.0% | |
| CTGATTCTTGTCGCCAGACC+AGG | + | chr2_2:50987978-50987997 | None:intergenic | 55.0% | |
| AGTGGCTCATCAAGGGGTGA+AGG | - | chr2_2:50988103-50988122 | Msa0256290:intron | 55.0% | |
| GTGGCTCATCAAGGGGTGAA+GGG | - | chr2_2:50988104-50988123 | Msa0256290:intron | 55.0% | |
| GTAGTTATGCGGGTGGTACG+CGG | + | chr2_2:50988695-50988714 | None:intergenic | 55.0% | |
| ! | AGCACCGGAGTCTGAATCTG+AGG | + | chr2_2:50988841-50988860 | None:intergenic | 55.0% |
| ! | AGGTTGTACATGGCACCGGA+GGG | + | chr2_2:50988949-50988968 | None:intergenic | 55.0% |
| ! | AAGGTTGTACATGGCACCGG+AGG | + | chr2_2:50988950-50988969 | None:intergenic | 55.0% |
| GGAGGGAGGAAGGTTGTACA+CGG | + | chr2_2:50988986-50989005 | None:intergenic | 55.0% | |
| ! | ACACAGTACTGGAGGGAGGA+AGG | + | chr2_2:50988996-50989015 | None:intergenic | 55.0% |
| GCCACTCCTGAGCCCTTGTT+TGG | - | chr2_2:50986958-50986977 | Msa0256290:intron | 60.0% | |
| TCTGCCAGAGCTGGACGTGA+TGG | - | chr2_2:50987000-50987019 | Msa0256290:CDS | 60.0% | |
| TGCTCCATCACGTCCAGCTC+TGG | + | chr2_2:50987007-50987026 | None:intergenic | 60.0% | |
| ! | TGGACGTGATGGAGCAGCTG+TGG | - | chr2_2:50987011-50987030 | Msa0256290:CDS | 60.0% |
| ! | CCACGTACCGGGGGTACATT+GGG | + | chr2_2:50987785-50987804 | None:intergenic | 60.0% |
| ! | ACCACGTACCGGGGGTACAT+TGG | + | chr2_2:50987786-50987805 | None:intergenic | 60.0% |
| ACTCCGGTGCTTCAACCCTC+CGG | - | chr2_2:50988931-50988950 | Msa0256290:CDS | 60.0% | |
| TTGTACACGGCACCCGAGAG+AGG | + | chr2_2:50988973-50988992 | None:intergenic | 60.0% | |
| GGAGCAGCTGTGGTTCCCTC+AGG | - | chr2_2:50987021-50987040 | Msa0256290:CDS | 65.0% | |
| CCCAATGTACCCCCGGTACG+TGG | - | chr2_2:50987782-50987801 | Msa0256290:CDS | 65.0% | |
| ! | TGGTACGCGGTACTGGAGGG+AGG | + | chr2_2:50988682-50988701 | None:intergenic | 65.0% |
| ! | GGGTGGTACGCGGTACTGGA+GGG | + | chr2_2:50988685-50988704 | None:intergenic | 65.0% |
| ATGCGGGTGGTACGCGGTAC+TGG | + | chr2_2:50988689-50988708 | None:intergenic | 65.0% | |
| GCACCGGAGGGTTGAAGCAC+CGG | + | chr2_2:50988937-50988956 | None:intergenic | 65.0% | |
| ACACGGCACCCGAGAGAGGA+AGG | + | chr2_2:50988969-50988988 | None:intergenic | 65.0% | |
| ! | CGGGTGGTACGCGGTACTGG+AGG | + | chr2_2:50988686-50988705 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 50985081 | 50989062 | 50985081 | ID=Msa0256290;Name=Msa0256290 |
| chr2_2 | mRNA | 50985081 | 50989062 | 50985081 | ID=Msa0256290-mRNA-1;Parent=Msa0256290;Name=Msa0256290-mRNA-1;_AED=0.32;_eAED=0.33;_QI=73|0.83|0.85|1|1|1|7|0|570 |
| chr2_2 | exon | 50985081 | 50985386 | 50985081 | ID=Msa0256290-mRNA-1:exon:15405;Parent=Msa0256290-mRNA-1 |
| chr2_2 | exon | 50985939 | 50986250 | 50985939 | ID=Msa0256290-mRNA-1:exon:15404;Parent=Msa0256290-mRNA-1 |
| chr2_2 | exon | 50986347 | 50986486 | 50986347 | ID=Msa0256290-mRNA-1:exon:15403;Parent=Msa0256290-mRNA-1 |
| chr2_2 | exon | 50986814 | 50986877 | 50986814 | ID=Msa0256290-mRNA-1:exon:15402;Parent=Msa0256290-mRNA-1 |
| chr2_2 | exon | 50986976 | 50987647 | 50986976 | ID=Msa0256290-mRNA-1:exon:15401;Parent=Msa0256290-mRNA-1 |
| chr2_2 | exon | 50987737 | 50987880 | 50987737 | ID=Msa0256290-mRNA-1:exon:15400;Parent=Msa0256290-mRNA-1 |
| chr2_2 | exon | 50988915 | 50989062 | 50988915 | ID=Msa0256290-mRNA-1:exon:15399;Parent=Msa0256290-mRNA-1 |
| chr2_2 | five_prime_UTR | 50988990 | 50989062 | 50988990 | ID=Msa0256290-mRNA-1:five_prime_utr;Parent=Msa0256290-mRNA-1 |
| chr2_2 | CDS | 50988915 | 50988989 | 50988915 | ID=Msa0256290-mRNA-1:cds;Parent=Msa0256290-mRNA-1 |
| chr2_2 | CDS | 50987737 | 50987880 | 50987737 | ID=Msa0256290-mRNA-1:cds;Parent=Msa0256290-mRNA-1 |
| chr2_2 | CDS | 50986976 | 50987647 | 50986976 | ID=Msa0256290-mRNA-1:cds;Parent=Msa0256290-mRNA-1 |
| chr2_2 | CDS | 50986814 | 50986877 | 50986814 | ID=Msa0256290-mRNA-1:cds;Parent=Msa0256290-mRNA-1 |
| chr2_2 | CDS | 50986347 | 50986486 | 50986347 | ID=Msa0256290-mRNA-1:cds;Parent=Msa0256290-mRNA-1 |
| chr2_2 | CDS | 50985939 | 50986250 | 50985939 | ID=Msa0256290-mRNA-1:cds;Parent=Msa0256290-mRNA-1 |
| chr2_2 | CDS | 50985081 | 50985386 | 50985081 | ID=Msa0256290-mRNA-1:cds;Parent=Msa0256290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
