AlfalfaGEDB | Msa1039480

M. sativa cultivar zhongmu-4 / Msa1039480

KEGG: K08726
GO: GO:0000287 GO:0001676 GO:0003008 GO:0003013 GO:0003018 GO:0003674 GO:0003824 GO:0004301 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005782 GO:0005829 GO:0006082 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006633 GO:0006690 GO:0006725 GO:0006793 GO:0006796 GO:0006805 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006886 GO:0006950 GO:0006952 GO:0006954 GO:0006996 GO:0007031 GO:0008015 GO:0008104 GO:0008150 GO:0008152 GO:0008217 GO:0008610 GO:0009056 GO:0009058 GO:0009410 GO:0009636 GO:0009810 GO:0009893 GO:0009987 GO:0010468 GO:0010604 GO:0010628 GO:0015031 GO:0015643 GO:0015833 GO:0016043 GO:0016053 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0016801 GO:0016803 GO:0017144 GO:0018904 GO:0019216 GO:0019218 GO:0019222 GO:0019369 GO:0019373 GO:0019439 GO:0019725 GO:0019752 GO:0030003 GO:0030258 GO:0031907 GO:0031974 GO:0032501 GO:0032787 GO:0033036 GO:0033365 GO:0033559 GO:0034613 GO:0035150 GO:0035296 GO:0042221 GO:0042577 GO:0042578 GO:0042579 GO:0042592 GO:0042632 GO:0042759 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046272 GO:0046394 GO:0046483 GO:0046839 GO:0046872 GO:0046907 GO:0046983 GO:0048518 GO:0048878 GO:0050789 GO:0050801 GO:0050880 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055088 GO:0055092 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0070887 GO:0071466 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072330 GO:0072503 GO:0072507 GO:0072593 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0090066 GO:0090181 GO:0097176 GO:0097746 GO:0097755 GO:0098771 GO:1900673 GO:1901360 GO:1901361 GO:1901568 GO:1901575 GO:1901576
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039480	GAU11476.1	88.050	159	19	0	1	159	160	318	2.28e-96	291

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039480	sp\|I6YGS0\|EPHA_MYCTU	34.188	117	67	2	42	156	208	316	2.89e-16	77.4

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039480	Q8LPE6	86.792	159	21	0	1	159	117	275	1.93e-95	286

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0621940	Msa1039480	0.890792	7.147026e-74	-8.615850e-47
Msa0622010	Msa1039480	0.881865	1.681521e-70	-8.615850e-47
Msa0689770	Msa1039480	0.805613	1.226751e-49	-8.615850e-47
Msa1039480	Msa1085590	0.889921	1.570365e-73	-8.615850e-47
Msa1039480	Msa1305040	0.884753	1.464221e-71	-8.615850e-47
Msa1039480	Msa1306720	0.808297	3.319445e-50	-8.615850e-47
Msa1039480	Msa1420260	0.804826	1.792984e-49	-8.615850e-47
Msa1039480	Msa1433300	0.894502	2.322821e-75	-8.615850e-47
Msa0256290	Msa1039480	0.823830	1.121498e-53	-8.615850e-47
Msa0260120	Msa1039480	0.825842	3.759171e-54	-8.615850e-47
Msa0575990	Msa1039480	0.863840	1.867498e-64	-8.615850e-47
Msa0576100	Msa1039480	0.859210	4.840764e-63	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039480	MtrunA17_Chr7g0272181	83.648	159	26	0	1	159	161	319	2.56e-96	281
Msa1039480	MtrunA17_Chr7g0272531	83.648	159	26	0	1	159	191	349	6.01e-96	281
Msa1039480	MtrunA17_Chr7g0272481	84.277	159	25	0	1	159	161	319	2.15e-95	278
Msa1039480	MtrunA17_Chr7g0272501	82.390	159	28	0	1	159	161	319	8.71e-94	274
Msa1039480	MtrunA17_Chr7g0272171	81.132	159	30	0	1	159	161	319	3.13e-92	270
Msa1039480	MtrunA17_Chr4g0000111	68.553	159	49	1	2	159	164	322	1.46e-77	233
Msa1039480	MtrunA17_Chr7g0272431	60.870	161	59	2	1	159	161	319	4.50e-65	201
Msa1039480	MtrunA17_Chr7g0272441	62.112	161	57	2	1	159	161	319	7.66e-65	201
Msa1039480	MtrunA17_Chr7g0272451	59.748	159	61	2	1	159	161	316	1.73e-63	197
Msa1039480	MtrunA17_Chr4g0067581	58.491	159	65	1	1	159	198	355	1.39e-59	188
Msa1039480	MtrunA17_Chr7g0269471	52.532	158	74	1	2	159	161	317	3.01e-54	173
Msa1039480	MtrunA17_Chr7g0272391	71.795	117	11	2	1	116	1	96	6.28e-50	156
Msa1039480	MtrunA17_Chr7g0272461	59.813	107	39	2	17	121	1	105	6.97e-39	129
Msa1039480	MtrunA17_Chr8g0372491	42.138	159	87	3	2	159	163	317	1.74e-30	112
Msa1039480	MtrunA17_Chr2g0324141	33.125	160	97	5	2	158	158	310	4.84e-17	76.3
Msa1039480	MtrunA17_Chr2g0324161	33.125	160	97	5	2	158	158	310	1.56e-16	74.7
Msa1039480	MtrunA17_Chr7g0272511	72.500	40	11	0	116	155	27	66	5.04e-13	60.8
Msa1039480	MtrunA17_Chr4g0047701	32.500	160	98	5	2	158	157	309	1.09e-12	64.3
Msa1039480	MtrunA17_Chr4g0047681	30.625	160	101	5	2	158	157	309	1.45e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039480	AT3G05600.1	54.658	161	71	2	1	159	164	324	3.14e-58	184
Msa1039480	AT4G02340.1	50.311	161	74	3	1	159	160	316	2.60e-50	164
Msa1039480	AT4G15960.1	51.572	159	76	1	1	159	217	374	2.07e-49	163
Msa1039480	AT2G26740.1	55.975	159	69	1	1	159	164	321	1.01e-45	152
Msa1039480	AT2G26750.1	54.717	159	71	1	1	159	163	320	5.55e-44	147
Msa1039480	AT4G15955.3	54.167	120	55	0	40	159	185	304	8.86e-40	136
Msa1039480	AT3G51000.1	37.126	167	86	4	2	159	163	319	4.54e-28	106
Msa1039480	AT3G05600.2	48.750	80	39	2	1	78	164	243	1.32e-18	79.7

Find 94 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACATAGGCTTTGACTCTTTC+AGG	0.142456	7_1:+76716288	None:intergenic
CTACTATATCTGCAGATTTC+AGG	0.187669	7_1:-76716187	Msa1039480:intron
TAACATCTTTGTCACGATTA+TGG	0.237516	7_1:+76715447	None:intergenic
CCAGTAGTCTTGTTCCTTCA+TGG	0.244564	7_1:-76716560	Msa1039480:five_prime_UTR
TCTTTCTTGTTGCTCATGAT+TGG	0.252321	7_1:-76716349	Msa1039480:five_prime_UTR
CTTTCTTGTTGCTCATGATT+GGG	0.261431	7_1:-76716348	Msa1039480:five_prime_UTR
GAGGAAGTGATTGTACAAAA+AGG	0.277197	7_1:-76715552	Msa1039480:CDS
GTCATAGGAACCAGGTAAAA+TGG	0.282976	7_1:-76716043	Msa1039480:intron
ATAGATTATACCATCTTATA+TGG	0.288780	7_1:-76715296	Msa1039480:three_prime_UTR
AGCCAAGAGGGCAAGGTGTC+AGG	0.303963	7_1:+76715901	None:intergenic
CCCCTGACACCTTGCCCTCT+TGG	0.306808	7_1:-76715903	Msa1039480:CDS
CGCCATGAGTACCAGAGTTC+GGG	0.318900	7_1:+76716533	None:intergenic
ACAAAGATACCAACCAATTA+AGG	0.323697	7_1:+76716320	None:intergenic
GTCTCTAAATTTGACAAAAC+AGG	0.325042	7_1:-76715853	Msa1039480:CDS
AAAATGCATATAGCAGAAAA+AGG	0.330788	7_1:-76716593	Msa1039480:five_prime_UTR
ATCCTCACAACACGGAAAAT+TGG	0.340437	7_1:-76715976	Msa1039480:CDS
GGCAAGGTGTCAGGGGTATC+CGG	0.344243	7_1:+76715910	None:intergenic
TACGTAGAAACCCAAATAAA+AGG	0.378449	7_1:-76716245	Msa1039480:five_prime_UTR
GCTCCCGATCTCCGTGGCTT+TGG	0.388680	7_1:-76716467	Msa1039480:five_prime_UTR
GTGCCAGTGAAATTCATTAC+AGG	0.390811	7_1:-76715657	Msa1039480:CDS
TTTGACAAAACAGGCTTCAC+TGG	0.391236	7_1:-76715844	Msa1039480:CDS
ACAATCACTTCCTCTAAATT+CGG	0.394533	7_1:+76715561	None:intergenic
CACAGAACAGTGGAAGTTAA+TGG	0.407984	7_1:-76716620	Msa1039480:five_prime_UTR
TACACAATCTTCCACTTAGT+TGG	0.410078	7_1:-76716413	Msa1039480:five_prime_UTR
ATGGCACCGATTAGAACTTC+AGG	0.413477	7_1:+76715466	None:intergenic
GCGCCATGAGTACCAGAGTT+CGG	0.415510	7_1:+76716532	None:intergenic
CTGCTTCTTGATTATTAAAG+TGG	0.416796	7_1:+76715523	None:intergenic
TTTCTTTGTTTGCAGACTCT+GGG	0.430512	7_1:-76715715	Msa1039480:intron
CCAGTTCCGTACTCGCCGTT+GGG	0.435012	7_1:+76715940	None:intergenic
TTTCTTGTTGCTCATGATTG+GGG	0.438153	7_1:-76716347	Msa1039480:five_prime_UTR
ACTTAAAATCATCAAGGTCT+TGG	0.445786	7_1:+76715323	None:intergenic
GTCTCCAAAGCCACGGAGAT+CGG	0.447397	7_1:+76716463	None:intergenic
CATTACAGGTGAGCTAGATA+TGG	0.453391	7_1:-76715643	Msa1039480:CDS
TCTCCAAAGCCACGGAGATC+GGG	0.455811	7_1:+76716464	None:intergenic
GGAAGATGTGCCGAATTTAG+AGG	0.457691	7_1:-76715571	Msa1039480:CDS
GGGAACTGAGGGCCACAATC+TGG	0.459581	7_1:+76716507	None:intergenic
CCCAACGGCGAGTACGGAAC+TGG	0.466545	7_1:-76715940	Msa1039480:CDS
TACTCGCCGTTGGGAAGTAT+TGG	0.482139	7_1:+76715949	None:intergenic
ATACTTCCCAACGGCGAGTA+CGG	0.483099	7_1:-76715946	Msa1039480:CDS
GCCAAGAGGGCAAGGTGTCA+GGG	0.488708	7_1:+76715902	None:intergenic
GATCACTTGCGTGATGTGTA+TGG	0.490923	7_1:-76716216	Msa1039480:five_prime_UTR
TTCATGGCTTCCCCGAACTC+TGG	0.493938	7_1:-76716544	Msa1039480:five_prime_UTR
GCAAGGTGTCAGGGGTATCC+GGG	0.499424	7_1:+76715911	None:intergenic
ATTCATCCTGAAGTTCTAAT+CGG	0.501509	7_1:-76715472	Msa1039480:exon
ATTTGGGTTTCTACGTAGGA+AGG	0.512776	7_1:+76716251	None:intergenic
TCCCCGAACTCTGGTACTCA+TGG	0.513767	7_1:-76716535	Msa1039480:five_prime_UTR
TATACATGGAGGAGGAATGA+AGG	0.514026	7_1:-76715592	Msa1039480:CDS
GAGCTCACAGCTCCATGGAC+CGG	0.516623	7_1:-76715693	Msa1039480:CDS
TTCTTGTTGCTCATGATTGG+GGG	0.519082	7_1:-76716346	Msa1039480:five_prime_UTR
GCCACGGAGATCGGGAGCTA+CGG	0.522060	7_1:+76716472	None:intergenic
TCCAGTTCCGTACTCGCCGT+TGG	0.531974	7_1:+76715939	None:intergenic
TTCTGTAAGCCAAGAGGGCA+AGG	0.536914	7_1:+76715894	None:intergenic
CTCATGGCGCCACCAGATTG+TGG	0.538156	7_1:-76716519	Msa1039480:five_prime_UTR
CAACGATATCACCAACTAAG+TGG	0.540284	7_1:+76716402	None:intergenic
GAGCTACGGCGTGGTAGCCG+AGG	0.552775	7_1:+76716486	None:intergenic
ATGCAAACTTAAAATCATCA+AGG	0.555240	7_1:+76715317	None:intergenic
TCGCCGTTGGGAAGTATTGG+AGG	0.556206	7_1:+76715952	None:intergenic
GTGTAGTTGCTTATTGAAGT+GGG	0.557721	7_1:+76716431	None:intergenic
ACTAGTACAACCATATAAGA+TGG	0.557805	7_1:+76715286	None:intergenic
TCTTGTTGCTCATGATTGGG+GGG	0.557993	7_1:-76716345	Msa1039480:five_prime_UTR
TCACCTGTAATGAATTTCAC+TGG	0.565006	7_1:+76715654	None:intergenic
AGAGTTCGGGGAAGCCATGA+AGG	0.565421	7_1:+76716546	None:intergenic
CCATGAAGGAACAAGACTAC+TGG	0.567142	7_1:+76716560	None:intergenic
TCTGGGAGCTCACAGCTCCA+TGG	0.570609	7_1:-76715698	Msa1039480:CDS
TGATCCATGTCATAGGAACC+AGG	0.570861	7_1:-76716051	Msa1039480:intron
TTTGGGTTTCTACGTAGGAA+GGG	0.576884	7_1:+76716252	None:intergenic
GGGACTACTAAGACAAACAT+AGG	0.582812	7_1:+76716272	None:intergenic
TCGTCTTCTGTAAGCCAAGA+GGG	0.589343	7_1:+76715889	None:intergenic
GAAGCTGAGATTGCTGAAGT+TGG	0.590696	7_1:-76716021	Msa1039480:CDS
GGCATGAAGGAGTATATACA+TGG	0.590893	7_1:-76715606	Msa1039480:CDS
TGTGTAGTTGCTTATTGAAG+TGG	0.591667	7_1:+76716430	None:intergenic
AAGGAGTATATACATGGAGG+AGG	0.594079	7_1:-76715600	Msa1039480:CDS
GACAAAACAGGCTTCACTGG+AGG	0.595419	7_1:-76715841	Msa1039480:CDS
AGCTACGGCGTGGTAGCCGA+GGG	0.595559	7_1:+76716487	None:intergenic
GATATGGTGTACACTTCGCT+AGG	0.598016	7_1:-76715627	Msa1039480:CDS
ATTTAGAGACAAAGTAAGCA+AGG	0.606314	7_1:+76715866	None:intergenic
CGTGGTAGCCGAGGGAACTG+AGG	0.611603	7_1:+76716495	None:intergenic
GTGGTAGCCGAGGGAACTGA+GGG	0.612520	7_1:+76716496	None:intergenic
ATTGTGGCCCTCAGTTCCCT+CGG	0.614475	7_1:-76716503	Msa1039480:five_prime_UTR
AACTGAGGGCCACAATCTGG+TGG	0.616466	7_1:+76716510	None:intergenic
GTACACTTCGCTAGGCATGA+AGG	0.627184	7_1:-76715619	Msa1039480:CDS
CCAAGAGGGCAAGGTGTCAG+GGG	0.630193	7_1:+76715903	None:intergenic
CATCACTGTCTCCAAAGCCA+CGG	0.638680	7_1:+76716456	None:intergenic
ATGGACCGGAGTGAAAACCT+TGG	0.641351	7_1:-76715679	Msa1039480:CDS
GTTGCTCTCATAGACTCACT+TGG	0.649822	7_1:-76716383	Msa1039480:five_prime_UTR
AATGAATTTCACTGGCACCA+AGG	0.651882	7_1:+76715662	None:intergenic
GTCGTCTTCTGTAAGCCAAG+AGG	0.663533	7_1:+76715888	None:intergenic
GGTCCTCCAATACTTCCCAA+CGG	0.688968	7_1:-76715955	Msa1039480:CDS
GGAGATCGGGAGCTACGGCG+TGG	0.695350	7_1:+76716477	None:intergenic
GCCATGAGTACCAGAGTTCG+GGG	0.700987	7_1:+76716534	None:intergenic
AGGCATAGAACACAGAACAG+TGG	0.709768	7_1:-76716630	Msa1039480:five_prime_UTR
GCCGTAGCTCCCGATCTCCG+TGG	0.712868	7_1:-76716473	Msa1039480:five_prime_UTR
GTACGGAACTGGATTCAACC+CGG	0.719164	7_1:-76715929	Msa1039480:CDS
ATGAAGGAGTATATACATGG+AGG	0.728089	7_1:-76715603	Msa1039480:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTACTTTAATGAATGAT+TGG	-	chr7_1:76715734-76715753	Msa1039480:intron	15.0%
!!!	GATAATCAAATTTTCATTTA+GGG	-	chr7_1:76716063-76716082	Msa1039480:intron	15.0%
!!!	ATTTTACTTTAATGAATGAT+TGG	-	chr7_1:76715734-76715753	Msa1039480:intron	15.0%
!!!	GATAATCAAATTTTCATTTA+GGG	-	chr7_1:76716063-76716082	Msa1039480:intron	15.0%
!!!	TTTGAAATATGATCATATAG+AGG	+	chr7_1:76715681-76715700	None:intergenic	20.0%
!!!	GGATAATCAAATTTTCATTT+AGG	-	chr7_1:76716062-76716081	Msa1039480:intron	20.0%
!!	ATAGATTATACCATCTTATA+TGG	-	chr7_1:76716530-76716549	Msa1039480:five_prime_UTR	20.0%
!!!	TTTGAAATATGATCATATAG+AGG	+	chr7_1:76715681-76715700	None:intergenic	20.0%
!!!	GGATAATCAAATTTTCATTT+AGG	-	chr7_1:76716062-76716081	Msa1039480:intron	20.0%
!!	ATAGATTATACCATCTTATA+TGG	-	chr7_1:76716530-76716549	Msa1039480:five_prime_UTR	20.0%
!	AAAATGCATATAGCAGAAAA+AGG	-	chr7_1:76715233-76715252	Msa1039480:three_prime_UTR	25.0%
!!!	GATCTATGATCCTTTTATTT+GGG	+	chr7_1:76715594-76715613	None:intergenic	25.0%
!!	TGATCTATGATCCTTTTATT+TGG	+	chr7_1:76715595-76715614	None:intergenic	25.0%
!	ATGAAAATTTGATTATCCCA+AGG	+	chr7_1:76716060-76716079	None:intergenic	25.0%
!	ATGCAAACTTAAAATCATCA+AGG	+	chr7_1:76716512-76716531	None:intergenic	25.0%
!	AAAATGCATATAGCAGAAAA+AGG	-	chr7_1:76715233-76715252	Msa1039480:three_prime_UTR	25.0%
!!!	GATCTATGATCCTTTTATTT+GGG	+	chr7_1:76715594-76715613	None:intergenic	25.0%
!!	TGATCTATGATCCTTTTATT+TGG	+	chr7_1:76715595-76715614	None:intergenic	25.0%
!	ATGAAAATTTGATTATCCCA+AGG	+	chr7_1:76716060-76716079	None:intergenic	25.0%
!	ATGCAAACTTAAAATCATCA+AGG	+	chr7_1:76716512-76716531	None:intergenic	25.0%
!!!	TCCATCTCTGTTTTTTCTTA+CGG	+	chr7_1:76715176-76715195	None:intergenic	30.0%
	TAAGAAAAAACAGAGATGGA+AGG	-	chr7_1:76715176-76715195	Msa1039480:three_prime_UTR	30.0%
	TATAGCAGAAAAAGGAAAAG+AGG	-	chr7_1:76715241-76715260	Msa1039480:three_prime_UTR	30.0%
	ATAGCAGAAAAAGGAAAAGA+GGG	-	chr7_1:76715242-76715261	Msa1039480:three_prime_UTR	30.0%
	ACAAAGATACCAACCAATTA+AGG	+	chr7_1:76715509-76715528	None:intergenic	30.0%
!!	TTTTATTTGGGTTTCTACGT+AGG	+	chr7_1:76715582-76715601	None:intergenic	30.0%
	TACGTAGAAACCCAAATAAA+AGG	-	chr7_1:76715581-76715600	Msa1039480:CDS	30.0%
	AAATATGATCATATAGAGGC+TGG	+	chr7_1:76715677-76715696	None:intergenic	30.0%
!!!	TTGTTTTTGATCCATGTCAT+AGG	-	chr7_1:76715768-76715787	Msa1039480:intron	30.0%
!!	GATATTTTTCAGCACATAAG+CGG	+	chr7_1:76715833-76715852	None:intergenic	30.0%
	TGAAAAATATCCTCACAACA+CGG	-	chr7_1:76715842-76715861	Msa1039480:CDS	30.0%
	ATTTAGAGACAAAGTAAGCA+AGG	+	chr7_1:76715963-76715982	None:intergenic	30.0%
	GTCTCTAAATTTGACAAAAC+AGG	-	chr7_1:76715973-76715992	Msa1039480:CDS	30.0%
	ACAATCACTTCCTCTAAATT+CGG	+	chr7_1:76716268-76716287	None:intergenic	30.0%
	CTGCTTCTTGATTATTAAAG+TGG	+	chr7_1:76716306-76716325	None:intergenic	30.0%
!	ATTCATCCTGAAGTTCTAAT+CGG	-	chr7_1:76716354-76716373	Msa1039480:five_prime_UTR	30.0%
	TAACATCTTTGTCACGATTA+TGG	+	chr7_1:76716382-76716401	None:intergenic	30.0%
	ACTTAAAATCATCAAGGTCT+TGG	+	chr7_1:76716506-76716525	None:intergenic	30.0%
	ACTAGTACAACCATATAAGA+TGG	+	chr7_1:76716543-76716562	None:intergenic	30.0%
!!!	TCCATCTCTGTTTTTTCTTA+CGG	+	chr7_1:76715176-76715195	None:intergenic	30.0%
	TAAGAAAAAACAGAGATGGA+AGG	-	chr7_1:76715176-76715195	Msa1039480:three_prime_UTR	30.0%
	TATAGCAGAAAAAGGAAAAG+AGG	-	chr7_1:76715241-76715260	Msa1039480:three_prime_UTR	30.0%
	ATAGCAGAAAAAGGAAAAGA+GGG	-	chr7_1:76715242-76715261	Msa1039480:three_prime_UTR	30.0%
	ACAAAGATACCAACCAATTA+AGG	+	chr7_1:76715509-76715528	None:intergenic	30.0%
!!	TTTTATTTGGGTTTCTACGT+AGG	+	chr7_1:76715582-76715601	None:intergenic	30.0%
	TACGTAGAAACCCAAATAAA+AGG	-	chr7_1:76715581-76715600	Msa1039480:CDS	30.0%
	AAATATGATCATATAGAGGC+TGG	+	chr7_1:76715677-76715696	None:intergenic	30.0%
!!!	TTGTTTTTGATCCATGTCAT+AGG	-	chr7_1:76715768-76715787	Msa1039480:intron	30.0%
!!	GATATTTTTCAGCACATAAG+CGG	+	chr7_1:76715833-76715852	None:intergenic	30.0%
	TGAAAAATATCCTCACAACA+CGG	-	chr7_1:76715842-76715861	Msa1039480:CDS	30.0%
	ATTTAGAGACAAAGTAAGCA+AGG	+	chr7_1:76715963-76715982	None:intergenic	30.0%
	GTCTCTAAATTTGACAAAAC+AGG	-	chr7_1:76715973-76715992	Msa1039480:CDS	30.0%
	ACAATCACTTCCTCTAAATT+CGG	+	chr7_1:76716268-76716287	None:intergenic	30.0%
	CTGCTTCTTGATTATTAAAG+TGG	+	chr7_1:76716306-76716325	None:intergenic	30.0%
!	ATTCATCCTGAAGTTCTAAT+CGG	-	chr7_1:76716354-76716373	Msa1039480:five_prime_UTR	30.0%
	TAACATCTTTGTCACGATTA+TGG	+	chr7_1:76716382-76716401	None:intergenic	30.0%
	ACTTAAAATCATCAAGGTCT+TGG	+	chr7_1:76716506-76716525	None:intergenic	30.0%
	ACTAGTACAACCATATAAGA+TGG	+	chr7_1:76716543-76716562	None:intergenic	30.0%
	TCCGTAAGAAAAAACAGAGA+TGG	-	chr7_1:76715172-76715191	Msa1039480:three_prime_UTR	35.0%
	GTGTAGTTGCTTATTGAAGT+GGG	+	chr7_1:76715398-76715417	None:intergenic	35.0%
	TGTGTAGTTGCTTATTGAAG+TGG	+	chr7_1:76715399-76715418	None:intergenic	35.0%
	TACACAATCTTCCACTTAGT+TGG	-	chr7_1:76715413-76715432	Msa1039480:three_prime_UTR	35.0%
	TCTTTCTTGTTGCTCATGAT+TGG	-	chr7_1:76715477-76715496	Msa1039480:CDS	35.0%
	CTTTCTTGTTGCTCATGATT+GGG	-	chr7_1:76715478-76715497	Msa1039480:CDS	35.0%
	TTTCTTGTTGCTCATGATTG+GGG	-	chr7_1:76715479-76715498	Msa1039480:CDS	35.0%
	CTACTATATCTGCAGATTTC+AGG	-	chr7_1:76715639-76715658	Msa1039480:CDS	35.0%
!	TTTCTTTGTTTGCAGACTCT+GGG	-	chr7_1:76716111-76716130	Msa1039480:intron	35.0%
	TCACCTGTAATGAATTTCAC+TGG	+	chr7_1:76716175-76716194	None:intergenic	35.0%
!	ATGAAGGAGTATATACATGG+AGG	-	chr7_1:76716223-76716242	Msa1039480:five_prime_UTR	35.0%
	GAGGAAGTGATTGTACAAAA+AGG	-	chr7_1:76716274-76716293	Msa1039480:five_prime_UTR	35.0%
	AGTGATTGTACAAAAAGGAG+TGG	-	chr7_1:76716279-76716298	Msa1039480:five_prime_UTR	35.0%
	GTGATTGTACAAAAAGGAGT+GGG	-	chr7_1:76716280-76716299	Msa1039480:five_prime_UTR	35.0%
	TCCGTAAGAAAAAACAGAGA+TGG	-	chr7_1:76715172-76715191	Msa1039480:three_prime_UTR	35.0%
	GTGTAGTTGCTTATTGAAGT+GGG	+	chr7_1:76715398-76715417	None:intergenic	35.0%
	TGTGTAGTTGCTTATTGAAG+TGG	+	chr7_1:76715399-76715418	None:intergenic	35.0%
	TACACAATCTTCCACTTAGT+TGG	-	chr7_1:76715413-76715432	Msa1039480:three_prime_UTR	35.0%
	TCTTTCTTGTTGCTCATGAT+TGG	-	chr7_1:76715477-76715496	Msa1039480:CDS	35.0%
	CTTTCTTGTTGCTCATGATT+GGG	-	chr7_1:76715478-76715497	Msa1039480:CDS	35.0%
	TTTCTTGTTGCTCATGATTG+GGG	-	chr7_1:76715479-76715498	Msa1039480:CDS	35.0%
	CTACTATATCTGCAGATTTC+AGG	-	chr7_1:76715639-76715658	Msa1039480:CDS	35.0%
!	TTTCTTTGTTTGCAGACTCT+GGG	-	chr7_1:76716111-76716130	Msa1039480:intron	35.0%
	TCACCTGTAATGAATTTCAC+TGG	+	chr7_1:76716175-76716194	None:intergenic	35.0%
!	ATGAAGGAGTATATACATGG+AGG	-	chr7_1:76716223-76716242	Msa1039480:five_prime_UTR	35.0%
	GAGGAAGTGATTGTACAAAA+AGG	-	chr7_1:76716274-76716293	Msa1039480:five_prime_UTR	35.0%
	AGTGATTGTACAAAAAGGAG+TGG	-	chr7_1:76716279-76716298	Msa1039480:five_prime_UTR	35.0%
	GTGATTGTACAAAAAGGAGT+GGG	-	chr7_1:76716280-76716299	Msa1039480:five_prime_UTR	35.0%
	CACAGAACAGTGGAAGTTAA+TGG	-	chr7_1:76715206-76715225	Msa1039480:three_prime_UTR	40.0%
	CAACGATATCACCAACTAAG+TGG	+	chr7_1:76715427-76715446	None:intergenic	40.0%
	TTCTTGTTGCTCATGATTGG+GGG	-	chr7_1:76715480-76715499	Msa1039480:CDS	40.0%
!	ACATAGGCTTTGACTCTTTC+AGG	+	chr7_1:76715541-76715560	None:intergenic	40.0%
	GGGACTACTAAGACAAACAT+AGG	+	chr7_1:76715557-76715576	None:intergenic	40.0%
!	TTTGGGTTTCTACGTAGGAA+GGG	+	chr7_1:76715577-76715596	None:intergenic	40.0%
!	ATTTGGGTTTCTACGTAGGA+AGG	+	chr7_1:76715578-76715597	None:intergenic	40.0%
	TTTACCTGGTTCCTATGACA+TGG	+	chr7_1:76715782-76715801	None:intergenic	40.0%
	GTCATAGGAACCAGGTAAAA+TGG	-	chr7_1:76715783-76715802	Msa1039480:intron	40.0%
!	ATCTCAGCTTCCATTTTACC+TGG	+	chr7_1:76715796-76715815	None:intergenic	40.0%
	ATCCTCACAACACGGAAAAT+TGG	-	chr7_1:76715850-76715869	Msa1039480:CDS	40.0%
	TTTGACAAAACAGGCTTCAC+TGG	-	chr7_1:76715982-76716001	Msa1039480:CDS	40.0%
	ACAAACAATCAGAGAGCTAC+AGG	+	chr7_1:76716035-76716054	None:intergenic	40.0%
	TCTCTGATTGTTTGTCTCCT+TGG	-	chr7_1:76716040-76716059	Msa1039480:intron	40.0%
	CTCTGATTGTTTGTCTCCTT+GGG	-	chr7_1:76716041-76716060	Msa1039480:intron	40.0%
!	GTTTCTTTGTTTGCAGACTC+TGG	-	chr7_1:76716110-76716129	Msa1039480:intron	40.0%
	AATGAATTTCACTGGCACCA+AGG	+	chr7_1:76716167-76716186	None:intergenic	40.0%
	GTGCCAGTGAAATTCATTAC+AGG	-	chr7_1:76716169-76716188	Msa1039480:intron	40.0%
	CATTACAGGTGAGCTAGATA+TGG	-	chr7_1:76716183-76716202	Msa1039480:intron	40.0%
!	GGCATGAAGGAGTATATACA+TGG	-	chr7_1:76716220-76716239	Msa1039480:five_prime_UTR	40.0%
!	AAGGAGTATATACATGGAGG+AGG	-	chr7_1:76716226-76716245	Msa1039480:five_prime_UTR	40.0%
	TATACATGGAGGAGGAATGA+AGG	-	chr7_1:76716234-76716253	Msa1039480:five_prime_UTR	40.0%
	CACAGAACAGTGGAAGTTAA+TGG	-	chr7_1:76715206-76715225	Msa1039480:three_prime_UTR	40.0%
	CAACGATATCACCAACTAAG+TGG	+	chr7_1:76715427-76715446	None:intergenic	40.0%
	TTCTTGTTGCTCATGATTGG+GGG	-	chr7_1:76715480-76715499	Msa1039480:CDS	40.0%
!	ACATAGGCTTTGACTCTTTC+AGG	+	chr7_1:76715541-76715560	None:intergenic	40.0%
	GGGACTACTAAGACAAACAT+AGG	+	chr7_1:76715557-76715576	None:intergenic	40.0%
!	TTTGGGTTTCTACGTAGGAA+GGG	+	chr7_1:76715577-76715596	None:intergenic	40.0%
!	ATTTGGGTTTCTACGTAGGA+AGG	+	chr7_1:76715578-76715597	None:intergenic	40.0%
	TTTACCTGGTTCCTATGACA+TGG	+	chr7_1:76715782-76715801	None:intergenic	40.0%
	GTCATAGGAACCAGGTAAAA+TGG	-	chr7_1:76715783-76715802	Msa1039480:intron	40.0%
!	ATCTCAGCTTCCATTTTACC+TGG	+	chr7_1:76715796-76715815	None:intergenic	40.0%
	ATCCTCACAACACGGAAAAT+TGG	-	chr7_1:76715850-76715869	Msa1039480:CDS	40.0%
	TTTGACAAAACAGGCTTCAC+TGG	-	chr7_1:76715982-76716001	Msa1039480:CDS	40.0%
	ACAAACAATCAGAGAGCTAC+AGG	+	chr7_1:76716035-76716054	None:intergenic	40.0%
	TCTCTGATTGTTTGTCTCCT+TGG	-	chr7_1:76716040-76716059	Msa1039480:intron	40.0%
	CTCTGATTGTTTGTCTCCTT+GGG	-	chr7_1:76716041-76716060	Msa1039480:intron	40.0%
!	GTTTCTTTGTTTGCAGACTC+TGG	-	chr7_1:76716110-76716129	Msa1039480:intron	40.0%
	AATGAATTTCACTGGCACCA+AGG	+	chr7_1:76716167-76716186	None:intergenic	40.0%
	GTGCCAGTGAAATTCATTAC+AGG	-	chr7_1:76716169-76716188	Msa1039480:intron	40.0%
	CATTACAGGTGAGCTAGATA+TGG	-	chr7_1:76716183-76716202	Msa1039480:intron	40.0%
!	GGCATGAAGGAGTATATACA+TGG	-	chr7_1:76716220-76716239	Msa1039480:five_prime_UTR	40.0%
!	AAGGAGTATATACATGGAGG+AGG	-	chr7_1:76716226-76716245	Msa1039480:five_prime_UTR	40.0%
	TATACATGGAGGAGGAATGA+AGG	-	chr7_1:76716234-76716253	Msa1039480:five_prime_UTR	40.0%
	AGGCATAGAACACAGAACAG+TGG	-	chr7_1:76715196-76715215	Msa1039480:three_prime_UTR	45.0%
	CCATGAAGGAACAAGACTAC+TGG	+	chr7_1:76715269-76715288	None:intergenic	45.0%
!!	CCAGTAGTCTTGTTCCTTCA+TGG	-	chr7_1:76715266-76715285	Msa1039480:three_prime_UTR	45.0%
	GTTGCTCTCATAGACTCACT+TGG	-	chr7_1:76715443-76715462	Msa1039480:three_prime_UTR	45.0%
	TCTTGTTGCTCATGATTGGG+GGG	-	chr7_1:76715481-76715500	Msa1039480:CDS	45.0%
	GATCACTTGCGTGATGTGTA+TGG	-	chr7_1:76715610-76715629	Msa1039480:CDS	45.0%
	TGATCCATGTCATAGGAACC+AGG	-	chr7_1:76715775-76715794	Msa1039480:intron	45.0%
	GAAGCTGAGATTGCTGAAGT+TGG	-	chr7_1:76715805-76715824	Msa1039480:intron	45.0%
!	GACCAATTTTCCGTGTTGTG+AGG	+	chr7_1:76715855-76715874	None:intergenic	45.0%
	TCGTCTTCTGTAAGCCAAGA+GGG	+	chr7_1:76715940-76715959	None:intergenic	45.0%
	GATATGGTGTACACTTCGCT+AGG	-	chr7_1:76716199-76716218	Msa1039480:five_prime_UTR	45.0%
	GGAAGATGTGCCGAATTTAG+AGG	-	chr7_1:76716255-76716274	Msa1039480:five_prime_UTR	45.0%
!!	ATGGCACCGATTAGAACTTC+AGG	+	chr7_1:76716363-76716382	None:intergenic	45.0%
	AGGCATAGAACACAGAACAG+TGG	-	chr7_1:76715196-76715215	Msa1039480:three_prime_UTR	45.0%
	CCATGAAGGAACAAGACTAC+TGG	+	chr7_1:76715269-76715288	None:intergenic	45.0%
!!	CCAGTAGTCTTGTTCCTTCA+TGG	-	chr7_1:76715266-76715285	Msa1039480:three_prime_UTR	45.0%
	GTTGCTCTCATAGACTCACT+TGG	-	chr7_1:76715443-76715462	Msa1039480:three_prime_UTR	45.0%
	TCTTGTTGCTCATGATTGGG+GGG	-	chr7_1:76715481-76715500	Msa1039480:CDS	45.0%
	GATCACTTGCGTGATGTGTA+TGG	-	chr7_1:76715610-76715629	Msa1039480:CDS	45.0%
	TGATCCATGTCATAGGAACC+AGG	-	chr7_1:76715775-76715794	Msa1039480:intron	45.0%
	GAAGCTGAGATTGCTGAAGT+TGG	-	chr7_1:76715805-76715824	Msa1039480:intron	45.0%
!	GACCAATTTTCCGTGTTGTG+AGG	+	chr7_1:76715855-76715874	None:intergenic	45.0%
	TCGTCTTCTGTAAGCCAAGA+GGG	+	chr7_1:76715940-76715959	None:intergenic	45.0%
	GATATGGTGTACACTTCGCT+AGG	-	chr7_1:76716199-76716218	Msa1039480:five_prime_UTR	45.0%
	GGAAGATGTGCCGAATTTAG+AGG	-	chr7_1:76716255-76716274	Msa1039480:five_prime_UTR	45.0%
!!	ATGGCACCGATTAGAACTTC+AGG	+	chr7_1:76716363-76716382	None:intergenic	45.0%
	CATCACTGTCTCCAAAGCCA+CGG	+	chr7_1:76715373-76715392	None:intergenic	50.0%
!!	TGATTGGGGGGTGCCTTAAT+TGG	-	chr7_1:76715493-76715512	Msa1039480:CDS	50.0%
	GGTCCTCCAATACTTCCCAA+CGG	-	chr7_1:76715871-76715890	Msa1039480:CDS	50.0%
!	TACTCGCCGTTGGGAAGTAT+TGG	+	chr7_1:76715880-76715899	None:intergenic	50.0%
	ATACTTCCCAACGGCGAGTA+CGG	-	chr7_1:76715880-76715899	Msa1039480:CDS	50.0%
	GTACGGAACTGGATTCAACC+CGG	-	chr7_1:76715897-76715916	Msa1039480:CDS	50.0%
	TTCTGTAAGCCAAGAGGGCA+AGG	+	chr7_1:76715935-76715954	None:intergenic	50.0%
	GTCGTCTTCTGTAAGCCAAG+AGG	+	chr7_1:76715941-76715960	None:intergenic	50.0%
	GACAAAACAGGCTTCACTGG+AGG	-	chr7_1:76715985-76716004	Msa1039480:CDS	50.0%
!	AAGGTTTTCACTCCGGTCCA+TGG	+	chr7_1:76716148-76716167	None:intergenic	50.0%
	ATGGACCGGAGTGAAAACCT+TGG	-	chr7_1:76716147-76716166	Msa1039480:intron	50.0%
!	TGGCACCAAGGTTTTCACTC+CGG	+	chr7_1:76716155-76716174	None:intergenic	50.0%
	GTACACTTCGCTAGGCATGA+AGG	-	chr7_1:76716207-76716226	Msa1039480:five_prime_UTR	50.0%
	CATCACTGTCTCCAAAGCCA+CGG	+	chr7_1:76715373-76715392	None:intergenic	50.0%
!!	TGATTGGGGGGTGCCTTAAT+TGG	-	chr7_1:76715493-76715512	Msa1039480:CDS	50.0%
	GGTCCTCCAATACTTCCCAA+CGG	-	chr7_1:76715871-76715890	Msa1039480:CDS	50.0%
!	TACTCGCCGTTGGGAAGTAT+TGG	+	chr7_1:76715880-76715899	None:intergenic	50.0%
	ATACTTCCCAACGGCGAGTA+CGG	-	chr7_1:76715880-76715899	Msa1039480:CDS	50.0%
	GTACGGAACTGGATTCAACC+CGG	-	chr7_1:76715897-76715916	Msa1039480:CDS	50.0%
	TTCTGTAAGCCAAGAGGGCA+AGG	+	chr7_1:76715935-76715954	None:intergenic	50.0%
	GTCGTCTTCTGTAAGCCAAG+AGG	+	chr7_1:76715941-76715960	None:intergenic	50.0%
	GACAAAACAGGCTTCACTGG+AGG	-	chr7_1:76715985-76716004	Msa1039480:CDS	50.0%
!	AAGGTTTTCACTCCGGTCCA+TGG	+	chr7_1:76716148-76716167	None:intergenic	50.0%
	ATGGACCGGAGTGAAAACCT+TGG	-	chr7_1:76716147-76716166	Msa1039480:intron	50.0%
!	TGGCACCAAGGTTTTCACTC+CGG	+	chr7_1:76716155-76716174	None:intergenic	50.0%
	GTACACTTCGCTAGGCATGA+AGG	-	chr7_1:76716207-76716226	Msa1039480:five_prime_UTR	50.0%
	AGAGTTCGGGGAAGCCATGA+AGG	+	chr7_1:76715283-76715302	None:intergenic	55.0%
	TTCATGGCTTCCCCGAACTC+TGG	-	chr7_1:76715282-76715301	Msa1039480:three_prime_UTR	55.0%
	TCCCCGAACTCTGGTACTCA+TGG	-	chr7_1:76715291-76715310	Msa1039480:three_prime_UTR	55.0%
	GCCATGAGTACCAGAGTTCG+GGG	+	chr7_1:76715295-76715314	None:intergenic	55.0%
	CGCCATGAGTACCAGAGTTC+GGG	+	chr7_1:76715296-76715315	None:intergenic	55.0%
	GCGCCATGAGTACCAGAGTT+CGG	+	chr7_1:76715297-76715316	None:intergenic	55.0%
	AACTGAGGGCCACAATCTGG+TGG	+	chr7_1:76715319-76715338	None:intergenic	55.0%
	ATTGTGGCCCTCAGTTCCCT+CGG	-	chr7_1:76715323-76715342	Msa1039480:three_prime_UTR	55.0%
	TCTCCAAAGCCACGGAGATC+GGG	+	chr7_1:76715365-76715384	None:intergenic	55.0%
	GTCTCCAAAGCCACGGAGAT+CGG	+	chr7_1:76715366-76715385	None:intergenic	55.0%
!!	TGGGGGGTGCCTTAATTGGT+TGG	-	chr7_1:76715497-76715516	Msa1039480:CDS	55.0%
!!	TCGCCGTTGGGAAGTATTGG+AGG	+	chr7_1:76715877-76715896	None:intergenic	55.0%
	AGAGTTCGGGGAAGCCATGA+AGG	+	chr7_1:76715283-76715302	None:intergenic	55.0%
	TTCATGGCTTCCCCGAACTC+TGG	-	chr7_1:76715282-76715301	Msa1039480:three_prime_UTR	55.0%
	TCCCCGAACTCTGGTACTCA+TGG	-	chr7_1:76715291-76715310	Msa1039480:three_prime_UTR	55.0%
	GCCATGAGTACCAGAGTTCG+GGG	+	chr7_1:76715295-76715314	None:intergenic	55.0%
	CGCCATGAGTACCAGAGTTC+GGG	+	chr7_1:76715296-76715315	None:intergenic	55.0%
	GCGCCATGAGTACCAGAGTT+CGG	+	chr7_1:76715297-76715316	None:intergenic	55.0%
	AACTGAGGGCCACAATCTGG+TGG	+	chr7_1:76715319-76715338	None:intergenic	55.0%
	ATTGTGGCCCTCAGTTCCCT+CGG	-	chr7_1:76715323-76715342	Msa1039480:three_prime_UTR	55.0%
	TCTCCAAAGCCACGGAGATC+GGG	+	chr7_1:76715365-76715384	None:intergenic	55.0%
	GTCTCCAAAGCCACGGAGAT+CGG	+	chr7_1:76715366-76715385	None:intergenic	55.0%
!!	TGGGGGGTGCCTTAATTGGT+TGG	-	chr7_1:76715497-76715516	Msa1039480:CDS	55.0%
!!	TCGCCGTTGGGAAGTATTGG+AGG	+	chr7_1:76715877-76715896	None:intergenic	55.0%
	CTCATGGCGCCACCAGATTG+TGG	-	chr7_1:76715307-76715326	Msa1039480:three_prime_UTR	60.0%
	GGGAACTGAGGGCCACAATC+TGG	+	chr7_1:76715322-76715341	None:intergenic	60.0%
	GTGGTAGCCGAGGGAACTGA+GGG	+	chr7_1:76715333-76715352	None:intergenic	60.0%
	CCAGTTCCGTACTCGCCGTT+GGG	+	chr7_1:76715889-76715908	None:intergenic	60.0%
	TCCAGTTCCGTACTCGCCGT+TGG	+	chr7_1:76715890-76715909	None:intergenic	60.0%
!!	GCAAGGTGTCAGGGGTATCC+GGG	+	chr7_1:76715918-76715937	None:intergenic	60.0%
!!	GGCAAGGTGTCAGGGGTATC+CGG	+	chr7_1:76715919-76715938	None:intergenic	60.0%
!	CCAAGAGGGCAAGGTGTCAG+GGG	+	chr7_1:76715926-76715945	None:intergenic	60.0%
!	GCCAAGAGGGCAAGGTGTCA+GGG	+	chr7_1:76715927-76715946	None:intergenic	60.0%
!	AGCCAAGAGGGCAAGGTGTC+AGG	+	chr7_1:76715928-76715947	None:intergenic	60.0%
	TCTGGGAGCTCACAGCTCCA+TGG	-	chr7_1:76716128-76716147	Msa1039480:intron	60.0%
	GAGCTCACAGCTCCATGGAC+CGG	-	chr7_1:76716133-76716152	Msa1039480:intron	60.0%
	CTCATGGCGCCACCAGATTG+TGG	-	chr7_1:76715307-76715326	Msa1039480:three_prime_UTR	60.0%
	GGGAACTGAGGGCCACAATC+TGG	+	chr7_1:76715322-76715341	None:intergenic	60.0%
	GTGGTAGCCGAGGGAACTGA+GGG	+	chr7_1:76715333-76715352	None:intergenic	60.0%
	CCAGTTCCGTACTCGCCGTT+GGG	+	chr7_1:76715889-76715908	None:intergenic	60.0%
	TCCAGTTCCGTACTCGCCGT+TGG	+	chr7_1:76715890-76715909	None:intergenic	60.0%
!!	GCAAGGTGTCAGGGGTATCC+GGG	+	chr7_1:76715918-76715937	None:intergenic	60.0%
!!	GGCAAGGTGTCAGGGGTATC+CGG	+	chr7_1:76715919-76715938	None:intergenic	60.0%
!	CCAAGAGGGCAAGGTGTCAG+GGG	+	chr7_1:76715926-76715945	None:intergenic	60.0%
!	GCCAAGAGGGCAAGGTGTCA+GGG	+	chr7_1:76715927-76715946	None:intergenic	60.0%
!	AGCCAAGAGGGCAAGGTGTC+AGG	+	chr7_1:76715928-76715947	None:intergenic	60.0%
	TCTGGGAGCTCACAGCTCCA+TGG	-	chr7_1:76716128-76716147	Msa1039480:intron	60.0%
	GAGCTCACAGCTCCATGGAC+CGG	-	chr7_1:76716133-76716152	Msa1039480:intron	60.0%
	CGTGGTAGCCGAGGGAACTG+AGG	+	chr7_1:76715334-76715353	None:intergenic	65.0%
	AGCTACGGCGTGGTAGCCGA+GGG	+	chr7_1:76715342-76715361	None:intergenic	65.0%
	GCCACGGAGATCGGGAGCTA+CGG	+	chr7_1:76715357-76715376	None:intergenic	65.0%
	GCTCCCGATCTCCGTGGCTT+TGG	-	chr7_1:76715359-76715378	Msa1039480:three_prime_UTR	65.0%
	CCCAACGGCGAGTACGGAAC+TGG	-	chr7_1:76715886-76715905	Msa1039480:CDS	65.0%
	CCCCTGACACCTTGCCCTCT+TGG	-	chr7_1:76715923-76715942	Msa1039480:CDS	65.0%
	CGTGGTAGCCGAGGGAACTG+AGG	+	chr7_1:76715334-76715353	None:intergenic	65.0%
	AGCTACGGCGTGGTAGCCGA+GGG	+	chr7_1:76715342-76715361	None:intergenic	65.0%
	GCCACGGAGATCGGGAGCTA+CGG	+	chr7_1:76715357-76715376	None:intergenic	65.0%
	GCTCCCGATCTCCGTGGCTT+TGG	-	chr7_1:76715359-76715378	Msa1039480:three_prime_UTR	65.0%
	CCCAACGGCGAGTACGGAAC+TGG	-	chr7_1:76715886-76715905	Msa1039480:CDS	65.0%
	CCCCTGACACCTTGCCCTCT+TGG	-	chr7_1:76715923-76715942	Msa1039480:CDS	65.0%
	GAGCTACGGCGTGGTAGCCG+AGG	+	chr7_1:76715343-76715362	None:intergenic	70.0%
	GGAGATCGGGAGCTACGGCG+TGG	+	chr7_1:76715352-76715371	None:intergenic	70.0%
	GCCGTAGCTCCCGATCTCCG+TGG	-	chr7_1:76715353-76715372	Msa1039480:three_prime_UTR	70.0%
	GAGCTACGGCGTGGTAGCCG+AGG	+	chr7_1:76715343-76715362	None:intergenic	70.0%
	GGAGATCGGGAGCTACGGCG+TGG	+	chr7_1:76715352-76715371	None:intergenic	70.0%
	GCCGTAGCTCCCGATCTCCG+TGG	-	chr7_1:76715353-76715372	Msa1039480:three_prime_UTR	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	76715165	76716683	76715165	ID=Msa1039480;Name=Msa1039480
chr7_1	mRNA	76715165	76716683	76715165	ID=Msa1039480-mRNA-1;Parent=Msa1039480;Name=Msa1039480-mRNA-1;_AED=0.07;_eAED=0.07;_QI=508\|1\|1\|1\|0.5\|0.66\|3\|311\|159
chr7_1	exon	76715165	76715722	76715165	ID=Msa1039480-mRNA-1:exon:19968;Parent=Msa1039480-mRNA-1
chr7_1	exon	76715814	76716058	76715814	ID=Msa1039480-mRNA-1:exon:19967;Parent=Msa1039480-mRNA-1
chr7_1	exon	76716188	76716683	76716188	ID=Msa1039480-mRNA-1:exon:19966;Parent=Msa1039480-mRNA-1
chr7_1	five_prime_UTR	76716188	76716683	76716188	ID=Msa1039480-mRNA-1:five_prime_utr;Parent=Msa1039480-mRNA-1
chr7_1	five_prime_UTR	76716047	76716058	76716047	ID=Msa1039480-mRNA-1:five_prime_utr;Parent=Msa1039480-mRNA-1
chr7_1	CDS	76715814	76716046	76715814	ID=Msa1039480-mRNA-1:cds;Parent=Msa1039480-mRNA-1
chr7_1	CDS	76715476	76715722	76715476	ID=Msa1039480-mRNA-1:cds;Parent=Msa1039480-mRNA-1
chr7_1	three_prime_UTR	76715165	76715475	76715165	ID=Msa1039480-mRNA-1:three_prime_utr;Parent=Msa1039480-mRNA-1

Gene Sequence

>Msa1039480

ATGGAAGCTGAGATTGCTGAAGTTGGCACCGCTTATGTGCTGAAAAATATCCTCACAACACGGAAAATTGGTCCTCCAATACTTCCCAACGGCGAGTACGGAACTGGATTCAACCCGGATACCCCTGACACCTTGCCCTCTTGGCTTACAGAAGACGACCTTGCTTACTTTGTCTCTAAATTTGACAAAACAGGCTTCACTGGAGGATTGAACTACTACAGAAACATAGACCTACTCTGGGAGCTCACAGCTCCATGGACCGGAGTGAAAACCTTGGTGCCAGTGAAATTCATTACAGGTGAGCTAGATATGGTGTACACTTCGCTAGGCATGAAGGAGTATATACATGGAGGAGGAATGAAGGAAGATGTGCCGAATTTAGAGGAAGTGATTGTACAAAAAGGAGTGGGCCACTTTAATAATCAAGAAGCAGCATCAGAAATCAGTAAACACATTCACGAATTCATCCTGAAGTTCTAA

Protein sequence

>Msa1039480

MEAEIAEVGTAYVLKNILTTRKIGPPILPNGEYGTGFNPDTPDTLPSWLTEDDLAYFVSKFDKTGFTGGLNYYRNIDLLWELTAPWTGVKTLVPVKFITGELDMVYTSLGMKEYIHGGGMKEDVPNLEEVIVQKGVGHFNNQEAASEISKHIHEFILKF*