AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0263450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263450 MtrunA17_Chr2g0326451 78.269 543 48 4 12 486 10 550 0.0 837
Msa0263450 MtrunA17_Chr2g0326481 71.453 585 58 5 1 480 253 833 0.0 783
Msa0263450 MtrunA17_Chr4g0029301 61.407 583 120 4 1 479 257 838 0.0 681
Msa0263450 MtrunA17_Chr2g0326521 81.212 330 25 2 165 480 1 307 0.0 540
Msa0263450 MtrunA17_Chr8g0372421 40.978 593 231 15 4 485 262 846 1.54e-134 409
Msa0263450 MtrunA17_Chr5g0404841 41.327 588 225 15 4 480 260 838 2.33e-133 405
Msa0263450 MtrunA17_Chr8g0342001 39.212 584 242 11 4 479 259 837 3.04e-128 392
Msa0263450 MtrunA17_Chr2g0330291 38.974 585 242 11 4 479 262 840 9.04e-123 378
Msa0263450 MtrunA17_Chr2g0301001 38.515 579 244 15 4 480 261 829 4.73e-109 342
Msa0263450 MtrunA17_Chr1g0152571 41.737 472 179 11 1 380 262 729 8.27e-105 328
Msa0263450 MtrunA17_Chr5g0406921 36.269 579 250 17 4 479 262 824 5.12e-103 326
Msa0263450 MtrunA17_Chr2g0299161 39.490 471 190 11 1 380 259 725 2.32e-101 319
Msa0263450 MtrunA17_Chr8g0378221 40.619 485 242 13 26 479 427 896 9.81e-101 322
Msa0263450 MtrunA17_Chr3g0130711 40.167 478 184 9 4 382 261 735 2.35e-98 312
Msa0263450 MtrunA17_Chr1g0155701 38.235 476 191 10 4 384 263 730 8.86e-98 310
Msa0263450 MtrunA17_Chr5g0408371 42.921 445 204 16 63 479 409 831 1.08e-97 312
Msa0263450 MtrunA17_Chr3g0142001 37.395 476 201 10 4 387 262 732 6.63e-95 303
Msa0263450 MtrunA17_Chr4g0037031 31.749 589 267 12 1 479 269 832 1.56e-83 275
Msa0263450 MtrunA17_Chr3g0077531 35.714 476 205 10 9 386 265 737 1.02e-78 260
Msa0263450 MtrunA17_Chr3g0145581 30.051 589 276 13 1 481 268 828 4.43e-78 260
Msa0263450 MtrunA17_Chr3g0130721 32.218 478 201 13 6 390 264 711 1.38e-59 208
Msa0263450 MtrunA17_Chr3g0124931 31.991 422 200 10 17 384 306 694 1.12e-54 194
Msa0263450 MtrunA17_Chr4g0071281 44.000 225 118 5 166 387 39 258 1.03e-50 173
Msa0263450 MtrunA17_Chr2g0326491 56.970 165 17 2 24 134 354 518 6.90e-45 164
Msa0263450 MtrunA17_Chr2g0326491 78.378 37 8 0 1 37 253 289 1.49e-11 66.6
Msa0263450 MtrunA17_Chr2g0307981 33.922 283 149 7 95 369 39 291 9.76e-37 137
Msa0263450 MtrunA17_Chr5g0405781 33.333 114 59 2 348 444 237 350 2.47e-14 74.3
Msa0263450 MtrunA17_Chr3g0077541 42.667 75 43 0 411 485 1 75 1.59e-12 63.2
Msa0263450 MtrunA17_Chr2g0326441 90.323 31 3 0 1 31 253 283 2.17e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263450 AT2G28470.1 52.357 594 165 9 1 480 263 852 0.0 563
Msa0263450 AT2G28470.3 52.357 594 165 9 1 480 263 852 0.0 563
Msa0263450 AT2G28470.2 52.357 594 165 9 1 480 257 846 0.0 562
Msa0263450 AT2G28470.4 52.357 594 165 9 1 480 257 846 0.0 562
Msa0263450 AT4G36360.1 39.219 589 237 14 4 480 267 846 2.72e-132 404
Msa0263450 AT4G36360.2 39.219 589 236 15 4 480 267 845 1.21e-130 399
Msa0263450 AT2G28470.5 50.225 444 120 7 1 347 263 702 1.32e-129 392
Msa0263450 AT3G13750.1 38.671 587 243 13 4 480 268 847 8.51e-121 374
Msa0263450 AT5G20710.2 37.217 575 252 18 4 479 57 621 5.82e-105 326
Msa0263450 AT5G20710.1 37.217 575 252 18 4 479 262 826 4.13e-103 327
Msa0263450 AT2G32810.1 40.466 472 235 10 42 483 425 880 1.23e-102 327
Msa0263450 AT1G45130.2 38.831 479 181 12 4 382 186 652 3.03e-97 307
Msa0263450 AT1G45130.1 38.831 479 181 12 4 382 265 731 1.54e-96 307
Msa0263450 AT3G52840.1 39.270 466 190 10 4 380 263 724 2.00e-96 307
Msa0263450 AT3G52840.2 39.270 466 190 10 4 380 317 778 4.08e-96 307
Msa0263450 AT4G26140.1 38.330 467 194 11 4 380 263 725 6.40e-96 305
Msa0263450 AT5G63810.1 38.285 478 191 11 4 382 266 738 5.35e-92 295
Msa0263450 AT2G32810.2 41.176 408 197 8 68 446 449 842 2.06e-91 296
Msa0263450 AT4G26140.7 36.789 492 192 13 4 380 263 750 2.18e-90 291
Msa0263450 AT5G56870.1 37.740 469 198 12 1 380 260 723 6.65e-90 290
Msa0263450 AT1G77410.2 34.652 531 233 13 28 480 215 709 2.83e-84 274
Msa0263450 AT1G77410.4 34.652 531 233 13 28 480 215 709 2.83e-84 274
Msa0263450 AT1G77410.1 34.652 531 233 14 28 480 321 815 3.13e-83 274
Msa0263450 AT1G77410.3 34.652 531 233 14 28 480 326 820 3.37e-83 274
Msa0263450 AT1G31740.1 34.138 580 228 17 1 479 253 779 7.03e-82 270
Msa0263450 AT4G26140.9 36.105 457 173 13 4 345 263 715 1.07e-76 254
Msa0263450 AT4G38590.1 28.061 588 290 13 1 479 204 767 5.44e-72 244
Msa0263450 AT4G35010.1 28.209 592 288 14 1 480 274 840 3.52e-71 242
Msa0263450 AT2G16730.1 28.114 594 286 13 1 480 277 843 2.22e-70 240
Msa0263450 AT4G38590.2 27.568 584 294 13 1 479 272 831 1.87e-67 234
Msa0263450 AT5G63800.1 34.243 403 188 8 28 379 328 704 1.14e-64 222
Msa0263450 AT4G26140.3 35.359 362 144 9 4 277 263 622 1.88e-54 193
Msa0263450 AT4G26140.2 35.359 362 144 9 4 277 263 622 1.88e-54 193
Msa0263450 AT4G26140.6 35.165 364 144 9 4 277 263 624 1.14e-53 191
Msa0263450 AT4G26140.8 33.916 286 102 7 4 202 263 548 1.12e-33 134
Msa0263450 AT4G26140.4 31.833 311 100 9 4 202 263 573 7.48e-29 120
Msa0263450 AT4G26140.5 31.833 311 100 9 4 202 263 573 7.48e-29 120
Msa0263450 AT2G04060.1 32.550 298 154 10 28 312 53 316 1.24e-25 109
Msa0263450 AT3G53080.1 49.296 71 34 2 410 479 83 152 3.65e-15 73.6
Msa0263450 AT3G53075.2 38.384 99 55 3 383 480 100 193 6.85e-13 67.8
Msa0263450 AT3G53075.1 38.776 98 54 3 383 479 70 162 8.40e-13 67.0

Find 122 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTCACAAAGCTTTA+TGG 0.109681 2_2:-62851940 None:intergenic
CAAATCAACGGTTGGTTCTT+AGG 0.201157 2_2:-62853690 None:intergenic
TGACATTTGGTTTGAGTAAA+AGG 0.209652 2_2:-62853999 None:intergenic
TCCATAGCTTGCAAATTTAA+TGG 0.221804 2_2:-62854383 None:intergenic
AAAGGTGAGGCTTGGGTAAA+TGG 0.261772 2_2:+62853900 Msa0263450:CDS
TTGATACAGGTCGGCCTAAA+AGG 0.267162 2_2:+62853609 Msa0263450:intron
GAGTTTAACAGTTGGACTTC+AGG 0.290254 2_2:+62853289 Msa0263450:CDS
CTTAGGTTTGTCTTTGTTCC+CGG 0.301351 2_2:-62853210 None:intergenic
TAGAAACTTCAAGTTCAAAA+TGG 0.304366 2_2:+62852658 Msa0263450:CDS
TTTCCCCTGATTCTGTATCT+TGG 0.306746 2_2:-62854306 None:intergenic
TATATGCTGCAGGAATTATT+AGG 0.322005 2_2:+62851880 Msa0263450:intron
ACTACTTGTGGTACTCATTA+AGG 0.331342 2_2:+62852775 Msa0263450:CDS
CTAAGAACCAACCGTTGATT+TGG 0.333687 2_2:+62853691 Msa0263450:CDS
TTCGTAAACGGCAAGCTTGC+AGG 0.336185 2_2:+62852957 Msa0263450:CDS
GACAAAGCATTGGGCGATAC+TGG 0.337595 2_2:+62853922 Msa0263450:CDS
TCCATTAAATTTGCAAGCTA+TGG 0.340886 2_2:+62854382 Msa0263450:CDS
GCTTCAACAGCTAAACTCTT+TGG 0.347957 2_2:-62855053 None:intergenic
AAATCAACGGTTGGTTCTTA+GGG 0.361145 2_2:-62853689 None:intergenic
TTCAAAATGGAGTTGGATAA+AGG 0.363931 2_2:+62852671 Msa0263450:CDS
CAACACTCTTGTATTGTTTG+AGG 0.376145 2_2:+62854180 Msa0263450:CDS
TCCACAATTCATGTGACATT+TGG 0.376285 2_2:-62854012 None:intergenic
GACCTTCATGCCTTCGTAAA+CGG 0.380865 2_2:+62852945 Msa0263450:CDS
CGGACGCTGCAGAAGCAATA+AGG 0.386639 2_2:+62854438 Msa0263450:CDS
TCATATGCACATCAGAACTA+TGG 0.396147 2_2:+62853404 Msa0263450:intron
GGCCTAAAAGGTGAAGATTT+AGG 0.396713 2_2:+62853621 Msa0263450:CDS
TGGAACCAAGATACAGAATC+AGG 0.402684 2_2:+62854301 Msa0263450:CDS
GGAGTATCAACTGATACATT+TGG 0.403792 2_2:+62855011 Msa0263450:CDS
GAATTCTTAGGGAGTCAAAC+CGG 0.407325 2_2:+62853191 Msa0263450:intron
ATCCCGATCACAGTACTTTC+TGG 0.412854 2_2:+62853245 Msa0263450:CDS
TTCAAACCTTTCAATATCAC+TGG 0.417812 2_2:-62853464 None:intergenic
CCCGTGAAGTCAATCGCAAC+TGG 0.421516 2_2:-62853870 None:intergenic
GGTCTCTCTAGTGGAAATTC+CGG 0.429067 2_2:+62853642 Msa0263450:CDS
AATACAAGAGTGTTGTCGTT+TGG 0.430388 2_2:-62854172 None:intergenic
TGGTTCCACAAGTCTATTTG+AGG 0.439591 2_2:-62854286 None:intergenic
TGCGATTGACTTCACGGGGA+TGG 0.439820 2_2:+62853875 Msa0263450:CDS
TCCAGTTGCGATTGACTTCA+CGG 0.439836 2_2:+62853869 Msa0263450:CDS
ACCACCTATACCTCTAGGTT+TGG 0.439893 2_2:-62851999 None:intergenic
TGGACCAAGAGAAGTAATCT+TGG 0.450309 2_2:-62851979 None:intergenic
GCGATTGACTTCACGGGGAT+GGG 0.451344 2_2:+62853876 Msa0263450:CDS
CTTCAAGTTCAAAATGGAGT+TGG 0.456846 2_2:+62852664 Msa0263450:CDS
CTCTTTGGCACTCCTCTACA+AGG 0.457641 2_2:-62855038 None:intergenic
CAACATGTTACATGTCTGTA+TGG 0.459118 2_2:-62855091 None:intergenic
ACATGGGGAGCGGGGATCAC+CGG 0.459873 2_2:+62853440 Msa0263450:CDS
GATGGGAAAAGGTGAGGCTT+GGG 0.463029 2_2:+62853893 Msa0263450:CDS
GGACCAAGAGAAGTAATCTT+GGG 0.464627 2_2:-62851978 None:intergenic
CCAACCGTTGATTTGGTACA+AGG 0.469575 2_2:+62853698 Msa0263450:CDS
TTCCAGAAAGTACTGTGATC+GGG 0.469716 2_2:-62853247 None:intergenic
GACTTCACGGGGATGGGAAA+AGG 0.474886 2_2:+62853882 Msa0263450:CDS
GAACCCAAGATTACTTCTCT+TGG 0.475327 2_2:+62851975 Msa0263450:CDS
GTAGCAAAAGCTATTTGTGT+TGG 0.477984 2_2:-62854217 None:intergenic
TCTTATTGACAGGCCTGCAT+TGG 0.480214 2_2:+62854969 Msa0263450:intron
TTCCACAAGTCTATTTGAGG+TGG 0.485209 2_2:-62854283 None:intergenic
GGCGATGTCAATTGTAAAGA+AGG 0.486852 2_2:+62854459 Msa0263450:CDS
TTGATCTCTCCTCTCGGAAG+TGG 0.487529 2_2:+62853504 Msa0263450:CDS
GGGATGTCCACATTAAGCTT+AGG 0.489061 2_2:-62853227 None:intergenic
ATATTGAAAGGTTTGAAGAA+TGG 0.489802 2_2:+62853470 Msa0263450:CDS
TGGGTAAATGGACAAAGCAT+TGG 0.493909 2_2:+62853912 Msa0263450:CDS
GCAAGCTATGGAACACCACT+AGG 0.494447 2_2:+62854394 Msa0263450:CDS
GGATGGGAAAAGGTGAGGCT+TGG 0.496077 2_2:+62853892 Msa0263450:CDS
TTTCCAGAAAGTACTGTGAT+CGG 0.499351 2_2:-62853248 None:intergenic
CTTGTATTGTTTGAGGAAAG+TGG 0.502872 2_2:+62854187 Msa0263450:CDS
GGGTAAATGGACAAAGCATT+GGG 0.505117 2_2:+62853913 Msa0263450:CDS
ACAAACTTTGATGCTCCATC+CGG 0.506118 2_2:+62853840 Msa0263450:CDS
TTTGAAATGTACCGCCTCGT+TGG 0.514090 2_2:-62851465 None:intergenic
TTCCTTCACATTGAATCGCT+CGG 0.524122 2_2:+62852918 Msa0263450:CDS
CTCTCGGAAGTGGACATACC+AGG 0.527776 2_2:+62853514 Msa0263450:CDS
GTTGCATGAGTCTGTGCAAT+CGG 0.533957 2_2:-62853967 None:intergenic
ACCAAATGTCACATGAATTG+TGG 0.534217 2_2:+62854011 Msa0263450:CDS
CCAGTTGCGATTGACTTCAC+GGG 0.536094 2_2:+62853870 Msa0263450:CDS
TGAAGGAAAGTTTGAGAACC+AGG 0.536449 2_2:-62852903 None:intergenic
GGATCAAGAAGTTGTAGTGT+TGG 0.537164 2_2:+62854990 Msa0263450:CDS
GCATTTGAAGCAACATATGT+AGG 0.542208 2_2:-62853945 None:intergenic
CCTTGTACCAAATCAACGGT+TGG 0.544937 2_2:-62853698 None:intergenic
GTTGATCTTAAGGATGATCC+TGG 0.545273 2_2:+62852885 Msa0263450:CDS
CTAGTGGAAATTCCGGAGGA+TGG 0.556179 2_2:+62853649 Msa0263450:CDS
ACCTTTCAATATCACTGGAC+CGG 0.556352 2_2:-62853459 None:intergenic
ACCGGTCCAGTGATATTGAA+AGG 0.558381 2_2:+62853458 Msa0263450:CDS
AGACTGTGAATTCCATCCTC+CGG 0.568524 2_2:-62853661 None:intergenic
AATCGCAACTGGATTACTGC+CGG 0.573419 2_2:-62853859 None:intergenic
TATTGCTTCTGCAGCGTCCG+TGG 0.577381 2_2:-62854435 None:intergenic
ACCCACCTCAAATAGACTTG+TGG 0.578788 2_2:+62854281 Msa0263450:CDS
ACATGCGGAAACTTCTACCA+CGG 0.584028 2_2:+62854418 Msa0263450:CDS
TTACGAAGGCATGAAGGTCA+TGG 0.584389 2_2:-62852941 None:intergenic
TGCCGTTTACGAAGGCATGA+AGG 0.587904 2_2:-62852947 None:intergenic
TCCACAAGTCTATTTGAGGT+GGG 0.588450 2_2:-62854282 None:intergenic
GGAACCTGTGGGTATTTCGA+AGG 0.589135 2_2:+62852692 Msa0263450:CDS
ATTACCTTGTACCAAATCAA+CGG 0.590007 2_2:-62853702 None:intergenic
AATTCTTAGGGAGTCAAACC+GGG 0.592065 2_2:+62853192 Msa0263450:intron
ACAACTTCTTGATCCAATGC+AGG 0.595751 2_2:-62854982 None:intergenic
GGCCGAGCGATTCAATGTGA+AGG 0.596679 2_2:-62852920 None:intergenic
TGCAAGCTTGCCGTTTACGA+AGG 0.596822 2_2:-62852955 None:intergenic
ACACTCTTGATCTCTCCTCT+CGG 0.601381 2_2:+62853498 Msa0263450:CDS
TCTTTAAGATGACTCCACTT+CGG 0.604348 2_2:-62851906 None:intergenic
GAATTATTAGGCAGCCGAAG+TGG 0.606606 2_2:+62851892 Msa0263450:CDS
GATCTGCTGAGTTTAACAGT+TGG 0.607244 2_2:+62853281 Msa0263450:CDS
CACGGGGATGGGAAAAGGTG+AGG 0.608159 2_2:+62853887 Msa0263450:CDS
AACACTTACAATGTCTGTGA+TGG 0.608501 2_2:-62854038 None:intergenic
CTCTCTAGTGGAAATTCCGG+AGG 0.610446 2_2:+62853645 Msa0263450:CDS
GAAGATTTAGGTCTCTCTAG+TGG 0.612338 2_2:+62853633 Msa0263450:CDS
GGAACCAAGATACAGAATCA+GGG 0.617716 2_2:+62854302 Msa0263450:CDS
ACATTTGGAGACCCTTGTAG+AGG 0.618423 2_2:+62855026 Msa0263450:CDS
GCAACTGGATTACTGCCGGA+TGG 0.623513 2_2:-62853855 None:intergenic
GAGTTGGATAAAGGAACCTG+TGG 0.624652 2_2:+62852680 Msa0263450:CDS
CTGATAGAAGTGACTACTTG+TGG 0.624763 2_2:+62852763 Msa0263450:CDS
AGACAAACCTAAGCTTAATG+TGG 0.625480 2_2:+62853220 Msa0263450:CDS
TTCTCTTGGTCCAAACCTAG+AGG 0.630553 2_2:+62851989 Msa0263450:CDS
CAGTTGCGATTGACTTCACG+GGG 0.639490 2_2:+62853871 Msa0263450:CDS
TCATCCTTCGAAATACCCAC+AGG 0.647345 2_2:-62852696 None:intergenic
CAAGCTATGGAACACCACTA+GGG 0.651106 2_2:+62854395 Msa0263450:CDS
AAGTTTCCGCATGTCCCTAG+TGG 0.652981 2_2:-62854409 None:intergenic
GAACCAAGATACAGAATCAG+GGG 0.654289 2_2:+62854303 Msa0263450:CDS
TGGATTTCCTCACAGACCTG+TGG 0.658765 2_2:+62851411 Msa0263450:CDS
GCAAATGCGAGATCTTCCAC+AGG 0.659001 2_2:-62851427 None:intergenic
GGAACACCACTAGGGACATG+CGG 0.667083 2_2:+62854403 Msa0263450:CDS
CAAGTAGTCACTTCTATCAG+CGG 0.678440 2_2:-62852760 None:intergenic
AGATCTTCCACAGGTCTGTG+AGG 0.697656 2_2:-62851418 None:intergenic
TCATCTTAAAGATTTGCACA+AGG 0.710585 2_2:+62851917 Msa0263450:CDS
AGTTGGATAAAGGAACCTGT+GGG 0.713312 2_2:+62852681 Msa0263450:CDS
ACAGACTCATGCAACTACAG+AGG 0.715275 2_2:+62853975 Msa0263450:CDS
TCTTTGGCACTCCTCTACAA+GGG 0.721168 2_2:-62855037 None:intergenic
GTATTGTTTGAGGAAAGTGG+TGG 0.725658 2_2:+62854190 Msa0263450:CDS
CTGGTATGTCCACTTCCGAG+AGG 0.737350 2_2:-62853513 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACATTTCAAAATTACTATA+TGG + chr2_2:62851477-62851496 Msa0263450:intron 15.0%
!! AATATGATAATATTACTTCA+CGG + chr2_2:62851536-62851555 Msa0263450:intron 15.0%
!! TATATGTAGAATAGAAATTA+CGG + chr2_2:62851829-62851848 Msa0263450:intron 15.0%
!!! GTTTATATTGAAATTTTTGT+CGG + chr2_2:62852020-62852039 Msa0263450:intron 15.0%
!! ATATTATTGATGAATTCTTA+GGG + chr2_2:62853180-62853199 Msa0263450:intron 15.0%
!! AAGCAACTTAATATAAATGA+AGG - chr2_2:62852403-62852422 None:intergenic 20.0%
!!! GATGATATATTTTCAAAAAC+TGG + chr2_2:62852714-62852733 Msa0263450:CDS 20.0%
!!! AATTATTCACTAGGATTTTA+TGG + chr2_2:62852981-62853000 Msa0263450:intron 20.0%
!!! CAATAGATTATGAACATTTT+TGG - chr2_2:62853118-62853137 None:intergenic 20.0%
!! GATATTATTGATGAATTCTT+AGG + chr2_2:62853179-62853198 Msa0263450:intron 20.0%
!! TAATGAAGATACATTGTTAA+TGG + chr2_2:62853575-62853594 Msa0263450:intron 20.0%
!! AATTCCATAACTTATATCAA+GGG - chr2_2:62853749-62853768 None:intergenic 20.0%
!! AAATTCCATAACTTATATCA+AGG - chr2_2:62853750-62853769 None:intergenic 20.0%
!!! TAATTTGTTATGTTTCACTT+TGG + chr2_2:62854509-62854528 Msa0263450:intron 20.0%
!! ACTAAAATTATCTTATTGAC+AGG + chr2_2:62854959-62854978 Msa0263450:intron 20.0%
! ATATTACTTCACGGAAAAAT+TGG + chr2_2:62851545-62851564 Msa0263450:intron 25.0%
! AACAATAGATTTCAGTATGA+AGG - chr2_2:62851727-62851746 None:intergenic 25.0%
! GATAAAACTGTAAATTTCAG+AGG + chr2_2:62852291-62852310 Msa0263450:intron 25.0%
! TGATTAACCTATCTATAAAC+AGG + chr2_2:62852503-62852522 Msa0263450:intron 25.0%
! GATTAACCTATCTATAAACA+GGG + chr2_2:62852504-62852523 Msa0263450:intron 25.0%
! TTTATTAGTCCAAAGTAAGT+AGG + chr2_2:62852539-62852558 Msa0263450:intron 25.0%
! TTATTACATCCTACTTACTT+TGG - chr2_2:62852551-62852570 None:intergenic 25.0%
!! TAGAAACTTCAAGTTCAAAA+TGG + chr2_2:62852658-62852677 Msa0263450:CDS 25.0%
!! TTAAAAATAAGAGTTGATCG+TGG + chr2_2:62853053-62853072 Msa0263450:intron 25.0%
!!! AGATTATGAACATTTTTGGA+CGG - chr2_2:62853114-62853133 None:intergenic 25.0%
! TAAGCTATTCTATGCATAAT+TGG - chr2_2:62853339-62853358 None:intergenic 25.0%
! ATAGTAATGAGAGAAATCAT+TGG - chr2_2:62853367-62853386 None:intergenic 25.0%
! ATATTGAAAGGTTTGAAGAA+TGG + chr2_2:62853470-62853489 Msa0263450:CDS 25.0%
!! TTAATTCTTTTGATACAGGT+CGG + chr2_2:62853600-62853619 Msa0263450:intron 25.0%
! GAAACATAACAAATTAGCAA+GGG - chr2_2:62854505-62854524 None:intergenic 25.0%
! TGAAACATAACAAATTAGCA+AGG - chr2_2:62854506-62854525 None:intergenic 25.0%
!! TTTTCTATTGTTCAAGCATA+GGG - chr2_2:62854662-62854681 None:intergenic 25.0%
!! TAAGATTTGATAACAGAGTT+TGG - chr2_2:62854727-62854746 None:intergenic 25.0%
! TCATAACTTGTAGCAATGAA+TGG - chr2_2:62851665-62851684 None:intergenic 30.0%
ACATACCATACTCATCAATT+GGG - chr2_2:62851697-62851716 None:intergenic 30.0%
TATATGCTGCAGGAATTATT+AGG + chr2_2:62851880-62851899 Msa0263450:intron 30.0%
TCATCTTAAAGATTTGCACA+AGG + chr2_2:62851917-62851936 Msa0263450:CDS 30.0%
ATCTTGTAAGTTTCTTTCTC+TGG + chr2_2:62852111-62852130 Msa0263450:intron 30.0%
! TCTTTTACTATTTAAACCGC+AGG + chr2_2:62852206-62852225 Msa0263450:intron 30.0%
AAAACACCCTGTTTATAGAT+AGG - chr2_2:62852513-62852532 None:intergenic 30.0%
TTCAAAATGGAGTTGGATAA+AGG + chr2_2:62852671-62852690 Msa0263450:CDS 30.0%
AAGTACAGAATCATCTATCA+GGG - chr2_2:62852832-62852851 None:intergenic 30.0%
TTGAAACTCAAATGAAGTCA+AGG + chr2_2:62853014-62853033 Msa0263450:intron 30.0%
!!! ATCGTGGATTTTTTTTTCGA+GGG + chr2_2:62853069-62853088 Msa0263450:intron 30.0%
TTCAAACCTTTCAATATCAC+TGG - chr2_2:62853467-62853486 None:intergenic 30.0%
! GGAGTTAATTCTTTTGATAC+AGG + chr2_2:62853596-62853615 Msa0263450:intron 30.0%
ATTACCTTGTACCAAATCAA+CGG - chr2_2:62853705-62853724 None:intergenic 30.0%
GTTTCCCTTGATATAAGTTA+TGG + chr2_2:62853742-62853761 Msa0263450:intron 30.0%
TAATGCAACATGTATGTCAT+TGG - chr2_2:62853819-62853838 None:intergenic 30.0%
!! TGACATTTGGTTTGAGTAAA+AGG - chr2_2:62854002-62854021 None:intergenic 30.0%
GAGATTACCTGATTATGATT+AGG - chr2_2:62854361-62854380 None:intergenic 30.0%
TCCATTAAATTTGCAAGCTA+TGG + chr2_2:62854382-62854401 Msa0263450:CDS 30.0%
! TCCATAGCTTGCAAATTTAA+TGG - chr2_2:62854386-62854405 None:intergenic 30.0%
!! TTGTAAAGAAGGTGTTTATC+TGG + chr2_2:62854470-62854489 Msa0263450:intron 30.0%
TAGTTTACTGATATGTGAGT+AGG + chr2_2:62854561-62854580 Msa0263450:intron 30.0%
! GTTTTCTATTGTTCAAGCAT+AGG - chr2_2:62854663-62854682 None:intergenic 30.0%
!!! CAAATCTTAGTTTTTTCCGT+TGG + chr2_2:62854738-62854757 Msa0263450:intron 30.0%
!!! TTTTTCCGTTGGTTTTAAAG+TGG + chr2_2:62854749-62854768 Msa0263450:intron 30.0%
TACAGTCTAAGTTGTACTTA+CGG + chr2_2:62854866-62854885 Msa0263450:intron 30.0%
TTAGTATGTTACAACAACTC+TGG - chr2_2:62854944-62854963 None:intergenic 30.0%
CTTGACTAAAAACAGTACCA+TGG + chr2_2:62851608-62851627 Msa0263450:intron 35.0%
CATACCATACTCATCAATTG+GGG - chr2_2:62851696-62851715 None:intergenic 35.0%
GACATACCATACTCATCAAT+TGG - chr2_2:62851698-62851717 None:intergenic 35.0%
GATTTCAGTATGAAGGTTGA+AGG - chr2_2:62851720-62851739 None:intergenic 35.0%
! ATTTCTTTGCTATATGCTGC+AGG + chr2_2:62851870-62851889 Msa0263450:intron 35.0%
!! TCTTTAAGATGACTCCACTT+CGG - chr2_2:62851909-62851928 None:intergenic 35.0%
TGCTTCTTCACAAAGCTTTA+TGG - chr2_2:62851943-62851962 None:intergenic 35.0%
TATAAACCACCTATACCTCT+AGG - chr2_2:62852007-62852026 None:intergenic 35.0%
! AACATCTTATTTCGCGTCTT+AGG + chr2_2:62852048-62852067 Msa0263450:intron 35.0%
! TTTGCCACAACCACTATTTT+AGG + chr2_2:62852158-62852177 Msa0263450:intron 35.0%
! TTTTAGGCACTAACCAGATT+AGG + chr2_2:62852174-62852193 Msa0263450:intron 35.0%
AAGACTGTTAAGACCTAATC+TGG - chr2_2:62852190-62852209 None:intergenic 35.0%
TTTACTATTTAAACCGCAGG+CGG + chr2_2:62852209-62852228 Msa0263450:intron 35.0%
TGTAGTGCTTAATACTGCAA+AGG + chr2_2:62852368-62852387 Msa0263450:intron 35.0%
! CTTCAAGTTCAAAATGGAGT+TGG + chr2_2:62852664-62852683 Msa0263450:CDS 35.0%
ACTACTTGTGGTACTCATTA+AGG + chr2_2:62852775-62852794 Msa0263450:CDS 35.0%
GAAGTACAGAATCATCTATC+AGG - chr2_2:62852833-62852852 None:intergenic 35.0%
!!! CTTTTGAAGCGTTGATCTTA+AGG + chr2_2:62852875-62852894 Msa0263450:intron 35.0%
CTTGCAGGTAATTATTCACT+AGG + chr2_2:62852972-62852991 Msa0263450:intron 35.0%
!!! GATCGTGGATTTTTTTTTCG+AGG + chr2_2:62853068-62853087 Msa0263450:intron 35.0%
AGACAAACCTAAGCTTAATG+TGG + chr2_2:62853220-62853239 Msa0263450:CDS 35.0%
!! TTTCCAGAAAGTACTGTGAT+CGG - chr2_2:62853251-62853270 None:intergenic 35.0%
GTAATGAGAGAAATCATTGG+AGG - chr2_2:62853364-62853383 None:intergenic 35.0%
TCATATGCACATCAGAACTA+TGG + chr2_2:62853404-62853423 Msa0263450:intron 35.0%
!!! ATGGAGCTTTTTTTGACACA+TGG + chr2_2:62853423-62853442 Msa0263450:CDS 35.0%
!!! TGGAGCTTTTTTTGACACAT+GGG + chr2_2:62853424-62853443 Msa0263450:CDS 35.0%
! GACCTAAATCTTCACCTTTT+AGG - chr2_2:62853626-62853645 None:intergenic 35.0%
! AAATCAACGGTTGGTTCTTA+GGG - chr2_2:62853692-62853711 None:intergenic 35.0%
! GCATTTGAAGCAACATATGT+AGG - chr2_2:62853948-62853967 None:intergenic 35.0%
ACCAAATGTCACATGAATTG+TGG + chr2_2:62854011-62854030 Msa0263450:CDS 35.0%
TCCACAATTCATGTGACATT+TGG - chr2_2:62854015-62854034 None:intergenic 35.0%
AACACTTACAATGTCTGTGA+TGG - chr2_2:62854041-62854060 None:intergenic 35.0%
! TTTGGTTTCAAAAACGATCG+TGG - chr2_2:62854157-62854176 None:intergenic 35.0%
!! AATACAAGAGTGTTGTCGTT+TGG - chr2_2:62854175-62854194 None:intergenic 35.0%
CAACACTCTTGTATTGTTTG+AGG + chr2_2:62854180-62854199 Msa0263450:CDS 35.0%
CTTGTATTGTTTGAGGAAAG+TGG + chr2_2:62854187-62854206 Msa0263450:CDS 35.0%
GTAGCAAAAGCTATTTGTGT+TGG - chr2_2:62854220-62854239 None:intergenic 35.0%
GATTATGATTAGGACACTTG+AGG - chr2_2:62854351-62854370 None:intergenic 35.0%
CAAGTGTCCTAATCATAATC+AGG + chr2_2:62854351-62854370 Msa0263450:intron 35.0%
TAACAAATTAGCAAGGGAAC+AGG - chr2_2:62854499-62854518 None:intergenic 35.0%
TTGGTTTAGATCGACTATGT+TGG + chr2_2:62854528-62854547 Msa0263450:intron 35.0%
TGGTTTAGATCGACTATGTT+GGG + chr2_2:62854529-62854548 Msa0263450:intron 35.0%
TTTGTAGACGTAGACACAAT+TGG + chr2_2:62854701-62854720 Msa0263450:intron 35.0%
!! GCTAACCACTTTAAAACCAA+CGG - chr2_2:62854757-62854776 None:intergenic 35.0%
!!! GTTGGTTTTAAAGTGGTTAG+CGG + chr2_2:62854756-62854775 Msa0263450:intron 35.0%
TGTAGGGACATTTGATATGT+TGG - chr2_2:62854840-62854859 None:intergenic 35.0%
TTAGACTGTAAAACGCTGTA+GGG - chr2_2:62854856-62854875 None:intergenic 35.0%
ACAGTCTAAGTTGTACTTAC+GGG + chr2_2:62854867-62854886 Msa0263450:intron 35.0%
! GGAGTATCAACTGATACATT+TGG + chr2_2:62855011-62855030 Msa0263450:CDS 35.0%
GAACTTGTGAACAACGTTTC+AGG - chr2_2:62851511-62851530 None:intergenic 40.0%
!! ACGGAAAAATTGGCTCTAAG+AGG + chr2_2:62851555-62851574 Msa0263450:intron 40.0%
GACTAAAAACAGTACCATGG+AGG + chr2_2:62851611-62851630 Msa0263450:intron 40.0%
TACCAGTGTTGCATTTGTGA+CGG - chr2_2:62851760-62851779 None:intergenic 40.0%
GAACCCAAGATTACTTCTCT+TGG + chr2_2:62851975-62851994 Msa0263450:CDS 40.0%
GGACCAAGAGAAGTAATCTT+GGG - chr2_2:62851981-62852000 None:intergenic 40.0%
TGGACCAAGAGAAGTAATCT+TGG - chr2_2:62851982-62852001 None:intergenic 40.0%
! TCTTTCTCTGGAAAATTCCC+TGG + chr2_2:62852123-62852142 Msa0263450:intron 40.0%
GCAAAATTGCACTCAATCCA+GGG - chr2_2:62852143-62852162 None:intergenic 40.0%
AGTGCCTAAAATAGTGGTTG+TGG - chr2_2:62852165-62852184 None:intergenic 40.0%
CTGGTTAGTGCCTAAAATAG+TGG - chr2_2:62852171-62852190 None:intergenic 40.0%
ATCAGATTTAGTGTCCACGT+TGG - chr2_2:62852274-62852293 None:intergenic 40.0%
ATTCATATCACTTGCCTGCA+TGG + chr2_2:62852316-62852335 Msa0263450:intron 40.0%
AGCACTACATTCTTGCAATC+TGG - chr2_2:62852357-62852376 None:intergenic 40.0%
AGTTGGATAAAGGAACCTGT+GGG + chr2_2:62852681-62852700 Msa0263450:CDS 40.0%
CAAGTAGTCACTTCTATCAG+CGG - chr2_2:62852763-62852782 None:intergenic 40.0%
CTGATAGAAGTGACTACTTG+TGG + chr2_2:62852763-62852782 Msa0263450:CDS 40.0%
GTTGATCTTAAGGATGATCC+TGG + chr2_2:62852885-62852904 Msa0263450:CDS 40.0%
TGAAGGAAAGTTTGAGAACC+AGG - chr2_2:62852906-62852925 None:intergenic 40.0%
TTCCTTCACATTGAATCGCT+CGG + chr2_2:62852918-62852937 Msa0263450:CDS 40.0%
TTTCGAGGGATAGTTGATCA+TGG + chr2_2:62853083-62853102 Msa0263450:intron 40.0%
GAATTCTTAGGGAGTCAAAC+CGG + chr2_2:62853191-62853210 Msa0263450:intron 40.0%
AATTCTTAGGGAGTCAAACC+GGG + chr2_2:62853192-62853211 Msa0263450:intron 40.0%
CTTAGGTTTGTCTTTGTTCC+CGG - chr2_2:62853213-62853232 None:intergenic 40.0%
!! TTCCAGAAAGTACTGTGATC+GGG - chr2_2:62853250-62853269 None:intergenic 40.0%
GATCTGCTGAGTTTAACAGT+TGG + chr2_2:62853281-62853300 Msa0263450:CDS 40.0%
GAGTTTAACAGTTGGACTTC+AGG + chr2_2:62853289-62853308 Msa0263450:CDS 40.0%
!!! GGAGCTTTTTTTGACACATG+GGG + chr2_2:62853425-62853444 Msa0263450:CDS 40.0%
!!! TTTTTTTGACACATGGGGAG+CGG + chr2_2:62853430-62853449 Msa0263450:CDS 40.0%
ACCTTTCAATATCACTGGAC+CGG - chr2_2:62853462-62853481 None:intergenic 40.0%
GGCCTAAAAGGTGAAGATTT+AGG + chr2_2:62853621-62853640 Msa0263450:CDS 40.0%
GAAGATTTAGGTCTCTCTAG+TGG + chr2_2:62853633-62853652 Msa0263450:CDS 40.0%
! CAAATCAACGGTTGGTTCTT+AGG - chr2_2:62853693-62853712 None:intergenic 40.0%
! CTAAGAACCAACCGTTGATT+TGG + chr2_2:62853691-62853710 Msa0263450:CDS 40.0%
ACAAACTTTGATGCTCCATC+CGG + chr2_2:62853840-62853859 Msa0263450:CDS 40.0%
TGGGTAAATGGACAAAGCAT+TGG + chr2_2:62853912-62853931 Msa0263450:CDS 40.0%
! GGGTAAATGGACAAAGCATT+GGG + chr2_2:62853913-62853932 Msa0263450:CDS 40.0%
GTACATGGTATCTGTGAGAT+GGG - chr2_2:62854135-62854154 None:intergenic 40.0%
TCAAAAACGATCGTGGTACA+TGG - chr2_2:62854150-62854169 None:intergenic 40.0%
GTATTGTTTGAGGAAAGTGG+TGG + chr2_2:62854190-62854209 Msa0263450:CDS 40.0%
! TCCACAAGTCTATTTGAGGT+GGG - chr2_2:62854285-62854304 None:intergenic 40.0%
TTCCACAAGTCTATTTGAGG+TGG - chr2_2:62854286-62854305 None:intergenic 40.0%
TGGTTCCACAAGTCTATTTG+AGG - chr2_2:62854289-62854308 None:intergenic 40.0%
TGGAACCAAGATACAGAATC+AGG + chr2_2:62854301-62854320 Msa0263450:CDS 40.0%
GGAACCAAGATACAGAATCA+GGG + chr2_2:62854302-62854321 Msa0263450:CDS 40.0%
GAACCAAGATACAGAATCAG+GGG + chr2_2:62854303-62854322 Msa0263450:CDS 40.0%
TTTCCCCTGATTCTGTATCT+TGG - chr2_2:62854309-62854328 None:intergenic 40.0%
ACAGAATCAGGGGAAAAAGT+AGG + chr2_2:62854313-62854332 Msa0263450:intron 40.0%
CAGAATCAGGGGAAAAAGTA+GGG + chr2_2:62854314-62854333 Msa0263450:intron 40.0%
GGCGATGTCAATTGTAAAGA+AGG + chr2_2:62854459-62854478 Msa0263450:CDS 40.0%
TAGATCGACTATGTTGGGTA+TGG + chr2_2:62854534-62854553 Msa0263450:intron 40.0%
CTTAGACTGTAAAACGCTGT+AGG - chr2_2:62854857-62854876 None:intergenic 40.0%
ACAACTTCTTGATCCAATGC+AGG - chr2_2:62854985-62855004 None:intergenic 40.0%
GGATCAAGAAGTTGTAGTGT+TGG + chr2_2:62854990-62855009 Msa0263450:CDS 40.0%
GCTTCAACAGCTAAACTCTT+TGG - chr2_2:62855056-62855075 None:intergenic 40.0%
! TTTGAAATGTACCGCCTCGT+TGG - chr2_2:62851468-62851487 None:intergenic 45.0%
ACCAACTTTGACCGAAGTAC+TGG + chr2_2:62851635-62851654 Msa0263450:intron 45.0%
!! AACTTTGACCGAAGTACTGG+CGG + chr2_2:62851638-62851657 Msa0263450:intron 45.0%
GATGCCCCAATTGATGAGTA+TGG + chr2_2:62851689-62851708 Msa0263450:intron 45.0%
GAATTATTAGGCAGCCGAAG+TGG + chr2_2:62851892-62851911 Msa0263450:CDS 45.0%
TTCTCTTGGTCCAAACCTAG+AGG + chr2_2:62851989-62852008 Msa0263450:CDS 45.0%
! TGGTCCAAACCTAGAGGTAT+AGG + chr2_2:62851995-62852014 Msa0263450:intron 45.0%
! TCCAAACCTAGAGGTATAGG+TGG + chr2_2:62851998-62852017 Msa0263450:intron 45.0%
ACCACCTATACCTCTAGGTT+TGG - chr2_2:62852002-62852021 None:intergenic 45.0%
GGCAAAATTGCACTCAATCC+AGG - chr2_2:62852144-62852163 None:intergenic 45.0%
GTCTTATAAATTGCCGCCTG+CGG - chr2_2:62852225-62852244 None:intergenic 45.0%
CAGGCGGCAATTTATAAGAC+AGG + chr2_2:62852225-62852244 Msa0263450:intron 45.0%
GAGTTGGATAAAGGAACCTG+TGG + chr2_2:62852680-62852699 Msa0263450:CDS 45.0%
TCATCCTTCGAAATACCCAC+AGG - chr2_2:62852699-62852718 None:intergenic 45.0%
GGGCAAATATCTTTCGAACG+TGG - chr2_2:62852812-62852831 None:intergenic 45.0%
! TTACGAAGGCATGAAGGTCA+TGG - chr2_2:62852944-62852963 None:intergenic 45.0%
GACCTTCATGCCTTCGTAAA+CGG + chr2_2:62852945-62852964 Msa0263450:CDS 45.0%
GGGATGTCCACATTAAGCTT+AGG - chr2_2:62853230-62853249 None:intergenic 45.0%
ATCCCGATCACAGTACTTTC+TGG + chr2_2:62853245-62853264 Msa0263450:CDS 45.0%
!!! TTTTTTGACACATGGGGAGC+GGG + chr2_2:62853431-62853450 Msa0263450:CDS 45.0%
ACCGGTCCAGTGATATTGAA+AGG + chr2_2:62853458-62853477 Msa0263450:CDS 45.0%
ACACTCTTGATCTCTCCTCT+CGG + chr2_2:62853498-62853517 Msa0263450:CDS 45.0%
ATCAAAAGTGAAGACCGACC+TGG - chr2_2:62853535-62853554 None:intergenic 45.0%
TTGATACAGGTCGGCCTAAA+AGG + chr2_2:62853609-62853628 Msa0263450:intron 45.0%
GGTCTCTCTAGTGGAAATTC+CGG + chr2_2:62853642-62853661 Msa0263450:CDS 45.0%
AGACTGTGAATTCCATCCTC+CGG - chr2_2:62853664-62853683 None:intergenic 45.0%
CCTTGTACCAAATCAACGGT+TGG - chr2_2:62853701-62853720 None:intergenic 45.0%
!! CCAACCGTTGATTTGGTACA+AGG + chr2_2:62853698-62853717 Msa0263450:CDS 45.0%
AATCGCAACTGGATTACTGC+CGG - chr2_2:62853862-62853881 None:intergenic 45.0%
! TCCAGTTGCGATTGACTTCA+CGG + chr2_2:62853869-62853888 Msa0263450:CDS 45.0%
AAAGGTGAGGCTTGGGTAAA+TGG + chr2_2:62853900-62853919 Msa0263450:CDS 45.0%
GTTGCATGAGTCTGTGCAAT+CGG - chr2_2:62853970-62853989 None:intergenic 45.0%
ACAGACTCATGCAACTACAG+AGG + chr2_2:62853975-62853994 Msa0263450:CDS 45.0%
GGTACATGGTATCTGTGAGA+TGG - chr2_2:62854136-62854155 None:intergenic 45.0%
ACCCACCTCAAATAGACTTG+TGG + chr2_2:62854281-62854300 Msa0263450:CDS 45.0%
CAAGCTATGGAACACCACTA+GGG + chr2_2:62854395-62854414 Msa0263450:CDS 45.0%
ACATGCGGAAACTTCTACCA+CGG + chr2_2:62854418-62854437 Msa0263450:CDS 45.0%
CAAATGCACAGTGGTTGTAG+TGG - chr2_2:62854685-62854704 None:intergenic 45.0%
CTACGTCTACAAATGCACAG+TGG - chr2_2:62854694-62854713 None:intergenic 45.0%
ACACACTATGTGCAGAGAAG+TGG + chr2_2:62854789-62854808 Msa0263450:intron 45.0%
GCAGAGAAGTGGAGAATTGT+AGG + chr2_2:62854800-62854819 Msa0263450:intron 45.0%
CATTTGATATGTTGGAGCGC+AGG - chr2_2:62854832-62854851 None:intergenic 45.0%
TCTTATTGACAGGCCTGCAT+TGG + chr2_2:62854969-62854988 Msa0263450:intron 45.0%
ACATTTGGAGACCCTTGTAG+AGG + chr2_2:62855026-62855045 Msa0263450:CDS 45.0%
TCTTTGGCACTCCTCTACAA+GGG - chr2_2:62855040-62855059 None:intergenic 45.0%
!!! TAAAAATAACATTTTTATTA+TGG + chr2_2:62852568-62852587 Msa0263450:intron 5.0%
TGGATTTCCTCACAGACCTG+TGG + chr2_2:62851411-62851430 Msa0263450:CDS 50.0%
AGATCTTCCACAGGTCTGTG+AGG - chr2_2:62851421-62851440 None:intergenic 50.0%
GCAAATGCGAGATCTTCCAC+AGG - chr2_2:62851430-62851449 None:intergenic 50.0%
! GGTCAAAGTTGGTTCCTCCA+TGG - chr2_2:62851628-62851647 None:intergenic 50.0%
GCCAGTACTTCGGTCAAAGT+TGG - chr2_2:62851639-62851658 None:intergenic 50.0%
TGAATGGTCCGCCAGTACTT+CGG - chr2_2:62851649-62851668 None:intergenic 50.0%
AGCCGTCACAAATGCAACAC+TGG + chr2_2:62851755-62851774 Msa0263450:intron 50.0%
AAGATGCTCACAGACCATGC+AGG - chr2_2:62852333-62852352 None:intergenic 50.0%
GGAACCTGTGGGTATTTCGA+AGG + chr2_2:62852692-62852711 Msa0263450:CDS 50.0%
! TGCCGTTTACGAAGGCATGA+AGG - chr2_2:62852950-62852969 None:intergenic 50.0%
! TGCAAGCTTGCCGTTTACGA+AGG - chr2_2:62852958-62852977 None:intergenic 50.0%
TTCGTAAACGGCAAGCTTGC+AGG + chr2_2:62852957-62852976 Msa0263450:CDS 50.0%
! TTTTTGACACATGGGGAGCG+GGG + chr2_2:62853432-62853451 Msa0263450:CDS 50.0%
TTGATCTCTCCTCTCGGAAG+TGG + chr2_2:62853504-62853523 Msa0263450:CDS 50.0%
CTCTCTAGTGGAAATTCCGG+AGG + chr2_2:62853645-62853664 Msa0263450:CDS 50.0%
CTAGTGGAAATTCCGGAGGA+TGG + chr2_2:62853649-62853668 Msa0263450:CDS 50.0%
! CCAGTTGCGATTGACTTCAC+GGG + chr2_2:62853870-62853889 Msa0263450:CDS 50.0%
! CAGTTGCGATTGACTTCACG+GGG + chr2_2:62853871-62853890 Msa0263450:CDS 50.0%
GATGGGAAAAGGTGAGGCTT+GGG + chr2_2:62853893-62853912 Msa0263450:CDS 50.0%
!! GACAAAGCATTGGGCGATAC+TGG + chr2_2:62853922-62853941 Msa0263450:CDS 50.0%
GCAAGCTATGGAACACCACT+AGG + chr2_2:62854394-62854413 Msa0263450:CDS 50.0%
AAGTTTCCGCATGTCCCTAG+TGG - chr2_2:62854412-62854431 None:intergenic 50.0%
TGTGAGTAGGTTGCTTGAGC+TGG + chr2_2:62854574-62854593 Msa0263450:intron 50.0%
CTCTTTGGCACTCCTCTACA+AGG - chr2_2:62855041-62855060 None:intergenic 50.0%
!!! GTCGCACGCTTTTTCCAACG+AGG + chr2_2:62851451-62851470 Msa0263450:CDS 55.0%
!!! GCACGCTTTTTCCAACGAGG+CGG + chr2_2:62851454-62851473 Msa0263450:CDS 55.0%
AGTGTCCACGTTGGCGAGAA+AGG - chr2_2:62852265-62852284 None:intergenic 55.0%
GGCCGAGCGATTCAATGTGA+AGG - chr2_2:62852923-62852942 None:intergenic 55.0%
CTGGTATGTCCACTTCCGAG+AGG - chr2_2:62853516-62853535 None:intergenic 55.0%
CTCTCGGAAGTGGACATACC+AGG + chr2_2:62853514-62853533 Msa0263450:CDS 55.0%
CGGAAGTGGACATACCAGGT+CGG + chr2_2:62853518-62853537 Msa0263450:intron 55.0%
GCAACTGGATTACTGCCGGA+TGG - chr2_2:62853858-62853877 None:intergenic 55.0%
CCCGTGAAGTCAATCGCAAC+TGG - chr2_2:62853873-62853892 None:intergenic 55.0%
! TGCGATTGACTTCACGGGGA+TGG + chr2_2:62853875-62853894 Msa0263450:CDS 55.0%
! GCGATTGACTTCACGGGGAT+GGG + chr2_2:62853876-62853895 Msa0263450:CDS 55.0%
GACTTCACGGGGATGGGAAA+AGG + chr2_2:62853882-62853901 Msa0263450:CDS 55.0%
GGATGGGAAAAGGTGAGGCT+TGG + chr2_2:62853892-62853911 Msa0263450:CDS 55.0%
GGACACTTGAGGAACAGTGC+AGG - chr2_2:62854340-62854359 None:intergenic 55.0%
GGAACACCACTAGGGACATG+CGG + chr2_2:62854403-62854422 Msa0263450:CDS 55.0%
TATTGCTTCTGCAGCGTCCG+TGG - chr2_2:62854438-62854457 None:intergenic 55.0%
CGGACGCTGCAGAAGCAATA+AGG + chr2_2:62854438-62854457 Msa0263450:CDS 55.0%
TGCTGCCTTTCTCGCCAACG+TGG + chr2_2:62852257-62852276 Msa0263450:intron 60.0%
CACGGGGATGGGAAAAGGTG+AGG + chr2_2:62853887-62853906 Msa0263450:CDS 60.0%
ACATGGGGAGCGGGGATCAC+CGG + chr2_2:62853440-62853459 Msa0263450:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 62851394 62855103 62851394 ID=Msa0263450;Name=Msa0263450
chr2_2 mRNA 62851394 62855103 62851394 ID=Msa0263450-mRNA-1;Parent=Msa0263450;Name=Msa0263450-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.1|0|1|0.9|0.81|11|0|486
chr2_2 exon 62851394 62851475 62851394 ID=Msa0263450-mRNA-1:exon:19439;Parent=Msa0263450-mRNA-1
chr2_2 exon 62851892 62852010 62851892 ID=Msa0263450-mRNA-1:exon:19440;Parent=Msa0263450-mRNA-1
chr2_2 exon 62852594 62852796 62852594 ID=Msa0263450-mRNA-1:exon:19441;Parent=Msa0263450-mRNA-1
chr2_2 exon 62852884 62852978 62852884 ID=Msa0263450-mRNA-1:exon:19442;Parent=Msa0263450-mRNA-1
chr2_2 exon 62853201 62853310 62853201 ID=Msa0263450-mRNA-1:exon:19443;Parent=Msa0263450-mRNA-1
chr2_2 exon 62853419 62853535 62853419 ID=Msa0263450-mRNA-1:exon:19444;Parent=Msa0263450-mRNA-1
chr2_2 exon 62853618 62853719 62853618 ID=Msa0263450-mRNA-1:exon:19445;Parent=Msa0263450-mRNA-1
chr2_2 exon 62853840 62854051 62853840 ID=Msa0263450-mRNA-1:exon:19446;Parent=Msa0263450-mRNA-1
chr2_2 exon 62854144 62854330 62854144 ID=Msa0263450-mRNA-1:exon:19447;Parent=Msa0263450-mRNA-1
chr2_2 exon 62854373 62854480 62854373 ID=Msa0263450-mRNA-1:exon:19448;Parent=Msa0263450-mRNA-1
chr2_2 exon 62854981 62855103 62854981 ID=Msa0263450-mRNA-1:exon:19449;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62851394 62851475 62851394 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62851892 62852010 62851892 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62852594 62852796 62852594 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62852884 62852978 62852884 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62853201 62853310 62853201 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62853419 62853535 62853419 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62853618 62853719 62853618 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62853840 62854051 62853840 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62854144 62854330 62854144 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62854373 62854480 62854373 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
chr2_2 CDS 62854981 62855103 62854981 ID=Msa0263450-mRNA-1:cds;Parent=Msa0263450-mRNA-1
Gene Sequence

>Msa0263450

TATCTTTTATTTGGTGGTGGATTTCCTCACAGACCTGTGGAAGATCTCGCATTTGCTGTCGCACGCTTTTTCCAACGAGGCGGAATTATTAGGCAGCCGAAGTGGAGTCATCTTAAAGATTTGCACAAGGCCATAAAGCTTTGTGAAGAAGCATTAATAGCTACAGAACCCAAGATTACTTCTCTTGGTCCAAACCTAGAGATTAATTCTGCATCTGTGATTTCAAACTTCGTAACTGAATCTTCAAAAGAAGATATCAGTTCTTTAGAAACTTCAAGTTCAAAATGGAGTTGGATAAAGGAACCTGTGGGTATTTCGAAGGATGATATATTTTCAAAAACTGGATTACTTGAGCAAATAAATATCACCGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGCGTTGATCTTAAGGATGATCCTGGTTCTCAAACTTTCCTTCACATTGAATCGCTCGGCCATGACCTTCATGCCTTCGTAAACGGCAAGCTTGCAGGGAGTCAAACCGGGAACAAAGACAAACCTAAGCTTAATGTGGACATCCCGATCACAGTACTTTCTGGAAAGAATAAAATTGATCTGCTGAGTTTAACAGTTGGACTTCAGAACTATGGAGCTTTTTTTGACACATGGGGAGCGGGGATCACCGGTCCAGTGATATTGAAAGGTTTGAAGAATGGCAACAACACTCTTGATCTCTCCTCTCGGAAGTGGACATACCAGGTCGGCCTAAAAGGTGAAGATTTAGGTCTCTCTAGTGGAAATTCCGGAGGATGGAATTCACAGTCTACTTTCCCTAAGAACCAACCGTTGATTTGGTACAAGACAAACTTTGATGCTCCATCCGGCAGTAATCCAGTTGCGATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGGCGATACTGGCCTACATATGTTGCTTCAAATGCCGATTGCACAGACTCATGCAACTACAGAGGACCTTTTACTCAAACCAAATGTCACATGAATTGTGGAAAACCATCACAGACATTATACCATGTACCACGATCGTTTTTGAAACCAAACGACAACACTCTTGTATTGTTTGAGGAAAGTGGTGGTGATCCAACACAAATAGCTTTTGCTACAAAACAGCTAGAAAGTTTGTGTGCACATGTATCTGATTCTCACCCACCTCAAATAGACTTGTGGAACCAAGATACAGAATCAGGGGAAAAAGTAATCTCTTCCATTAAATTTGCAAGCTATGGAACACCACTAGGGACATGCGGAAACTTCTACCACGGACGCTGCAGAAGCAATAAGGCGATGTCAATTGTAAAGAAGGCCTGCATTGGATCAAGAAGTTGTAGTGTTGGAGTATCAACTGATACATTTGGAGACCCTTGTAGAGGAGTGCCAAAGAGTTTAGCTGTTGAAGCTACTTGTGCTTATAGCCATACAGACATG
Protein sequence

>Msa0263450

YLLFGGGFPHRPVEDLAFAVARFFQRGGIIRQPKWSHLKDLHKAIKLCEEALIATEPKITSLGPNLEINSASVISNFVTESSKEDISSLETSSSKWSWIKEPVGISKDDIFSKTGLLEQINITADRSDYLWYSLSVDLKDDPGSQTFLHIESLGHDLHAFVNGKLAGSQTGNKDKPKLNVDIPITVLSGKNKIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGNNTLDLSSRKWTYQVGLKGEDLGLSSGNSGGWNSQSTFPKNQPLIWYKTNFDAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVASNADCTDSCNYRGPFTQTKCHMNCGKPSQTLYHVPRSFLKPNDNTLVLFEESGGDPTQIAFATKQLESLCAHVSDSHPPQIDLWNQDTESGEKVISSIKFASYGTPLGTCGNFYHGRCRSNKAMSIVKKACIGSRSCSVGVSTDTFGDPCRGVPKSLAVEATCAYSHTDM