AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0272440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272440 MtrunA17_Chr2g0282031 97.901 524 9 2 1 523 1 523 0.0 1024
Msa0272440 MtrunA17_Chr4g0021771 66.858 522 166 2 7 522 4 524 0.0 708
Msa0272440 MtrunA17_Chr4g0034681 52.429 494 214 5 45 517 22 515 1.36e-178 512
Msa0272440 MtrunA17_Chr3g0144361 51.423 492 219 4 29 504 8 495 1.78e-175 504
Msa0272440 MtrunA17_Chr4g0036021 52.017 471 213 4 45 502 19 489 8.97e-166 479
Msa0272440 MtrunA17_Chr6g0485661 48.542 480 239 3 21 492 23 502 2.50e-163 473
Msa0272440 MtrunA17_Chr8g0390521 48.739 476 229 5 34 500 2 471 2.44e-154 450
Msa0272440 MtrunA17_Chr8g0373531 48.560 486 234 4 50 519 16 501 4.16e-154 449
Msa0272440 MtrunA17_Chr5g0432581 48.319 476 230 5 50 509 16 491 5.23e-151 441
Msa0272440 MtrunA17_Chr5g0403831 41.116 484 259 6 50 513 28 505 8.79e-117 354
Msa0272440 MtrunA17_Chr7g0214451 35.886 457 282 5 50 501 30 480 5.69e-81 261
Msa0272440 MtrunA17_Chr1g0213611 33.693 463 288 5 50 501 75 529 1.48e-78 256
Msa0272440 MtrunA17_Chr1g0213631 36.184 456 272 5 72 514 4 453 1.98e-77 250
Msa0272440 MtrunA17_Chr7g0250881 34.008 494 308 9 7 497 21 499 3.17e-74 243
Msa0272440 MtrunA17_Chr6g0457781 34.244 476 298 6 25 497 76 539 7.81e-72 238
Msa0272440 MtrunA17_Chr4g0032021 32.271 502 299 9 24 497 63 551 2.27e-71 237
Msa0272440 MtrunA17_Chr4g0039651 30.178 507 306 10 21 497 9 497 1.64e-68 228
Msa0272440 MtrunA17_Chr2g0290181 37.088 364 212 5 45 398 19 375 2.78e-65 222
Msa0272440 MtrunA17_Chr2g0290181 37.273 110 68 1 393 502 450 558 8.85e-14 73.9
Msa0272440 MtrunA17_Chr8g0373181 31.663 499 312 11 7 497 5 482 7.27e-65 218
Msa0272440 MtrunA17_Chr1g0155221 31.746 504 315 12 8 501 5 489 3.78e-64 216
Msa0272440 MtrunA17_Chr7g0273281 32.805 442 277 7 60 498 69 493 3.25e-60 206
Msa0272440 MtrunA17_Chr2g0303731 36.905 336 206 3 52 384 25 357 2.46e-59 206
Msa0272440 MtrunA17_Chr2g0303731 36.538 104 66 0 399 502 452 555 4.22e-14 75.1
Msa0272440 MtrunA17_Chr3g0119401 32.301 452 282 9 54 497 94 529 3.77e-57 199
Msa0272440 MtrunA17_Chr3g0115781 29.560 477 294 13 53 500 26 489 4.08e-55 193
Msa0272440 MtrunA17_Chr8g0376601 37.430 358 196 7 40 384 15 357 6.97e-55 193
Msa0272440 MtrunA17_Chr8g0376601 45.652 92 50 0 399 490 450 541 1.90e-14 75.9
Msa0272440 MtrunA17_Chr2g0303701 38.138 333 195 5 52 380 25 350 1.07e-54 193
Msa0272440 MtrunA17_Chr2g0303701 42.308 104 60 0 399 502 449 552 9.20e-11 64.3
Msa0272440 MtrunA17_Chr2g0286721 30.364 494 317 8 8 497 10 480 1.20e-54 191
Msa0272440 MtrunA17_Chr8g0376631 36.503 326 191 5 52 369 25 342 1.47e-54 193
Msa0272440 MtrunA17_Chr8g0376631 40.385 104 62 0 399 502 451 554 1.19e-15 79.7
Msa0272440 MtrunA17_Chr8g0373191 30.568 458 271 9 52 500 38 457 5.14e-54 189
Msa0272440 MtrunA17_Chr3g0115721 29.114 474 300 10 53 500 24 487 2.53e-52 185
Msa0272440 MtrunA17_Chr7g0259471 27.696 473 308 6 35 497 22 470 2.94e-51 182
Msa0272440 MtrunA17_Chr3g0115741 28.392 479 301 11 53 502 27 492 1.88e-50 180
Msa0272440 MtrunA17_Chr8g0376611 38.686 274 163 3 103 375 12 281 2.48e-50 180
Msa0272440 MtrunA17_Chr8g0376611 41.818 110 57 1 393 502 383 485 1.34e-16 82.4
Msa0272440 MtrunA17_Chr1g0205671 28.178 472 299 11 53 496 24 483 3.49e-50 179
Msa0272440 MtrunA17_Chr8g0390141 28.778 483 308 13 46 502 19 491 5.33e-50 179
Msa0272440 MtrunA17_Chr4g0066581 30.599 451 284 9 60 502 59 488 9.91e-50 178
Msa0272440 MtrunA17_Chr5g0420841 27.859 481 308 12 51 502 20 490 7.51e-49 176
Msa0272440 MtrunA17_Chr1g0205691 29.620 395 253 6 113 496 103 483 7.67e-49 176
Msa0272440 MtrunA17_Chr7g0259221 29.019 479 319 6 23 497 11 472 8.75e-49 175
Msa0272440 MtrunA17_Chr4g0065311 27.823 496 313 14 39 502 2 484 1.06e-48 175
Msa0272440 MtrunA17_Chr5g0394341 26.695 472 307 10 53 496 23 483 2.21e-48 175
Msa0272440 MtrunA17_Chr3g0115751 29.474 475 297 12 53 500 29 492 4.04e-48 174
Msa0272440 MtrunA17_Chr3g0078971 27.731 476 306 12 53 501 24 488 4.51e-48 174
Msa0272440 MtrunA17_Chr6g0486681 26.141 482 322 10 46 502 19 491 6.61e-48 173
Msa0272440 MtrunA17_Chr6g0486671 26.141 482 322 10 46 502 19 491 6.61e-48 173
Msa0272440 MtrunA17_Chr3g0115711 28.085 470 301 11 53 496 24 482 3.70e-47 171
Msa0272440 MtrunA17_Chr5g0417611 25.466 483 321 11 49 502 20 492 4.80e-47 171
Msa0272440 MtrunA17_Chr6g0486021 29.140 477 315 7 32 498 21 484 6.01e-47 170
Msa0272440 MtrunA17_Chr1g0205681 26.652 469 304 10 57 496 27 484 2.62e-46 169
Msa0272440 MtrunA17_Chr1g0164871 27.273 495 317 13 38 502 8 489 5.23e-46 168
Msa0272440 MtrunA17_Chr1g0164851 27.475 495 316 13 38 502 8 489 5.86e-46 169
Msa0272440 MtrunA17_Chr2g0290161 37.013 308 154 6 92 392 2 276 6.18e-46 167
Msa0272440 MtrunA17_Chr3g0085971 28.306 431 285 10 101 518 90 509 6.68e-46 168
Msa0272440 MtrunA17_Chr8g0390261 26.050 476 317 11 52 502 26 491 2.10e-45 166
Msa0272440 MtrunA17_Chr4g0004821 30.357 448 287 10 58 498 41 470 1.44e-44 164
Msa0272440 MtrunA17_Chr3g0121674 31.975 319 191 4 214 522 1 303 3.67e-44 158
Msa0272440 MtrunA17_Chr5g0437021 28.016 489 309 13 45 502 13 489 4.31e-44 163
Msa0272440 MtrunA17_Chr4g0065324 28.601 479 297 12 53 502 30 492 4.76e-44 162
Msa0272440 MtrunA17_Chr3g0128081 25.259 483 315 9 53 502 22 491 1.17e-43 162
Msa0272440 MtrunA17_Chr3g0078991 26.305 498 325 11 31 501 7 489 2.32e-43 161
Msa0272440 MtrunA17_Chr4g0048051 28.030 396 260 7 118 501 108 490 1.07e-42 159
Msa0272440 MtrunA17_Chr3g0128171 25.240 416 286 6 99 502 42 444 6.47e-42 156
Msa0272440 MtrunA17_Chr5g0445601 25.755 497 332 11 31 502 6 490 3.16e-41 155
Msa0272440 MtrunA17_Chr3g0078791 26.202 416 262 7 99 502 34 416 5.97e-41 152
Msa0272440 MtrunA17_Chr4g0048411 24.798 496 327 10 52 515 22 503 3.57e-40 152
Msa0272440 MtrunA17_Chr7g0257631 25.102 490 331 10 38 502 46 524 2.64e-39 150
Msa0272440 MtrunA17_Chr3g0115731 27.027 481 280 13 53 500 24 466 8.98e-36 139
Msa0272440 MtrunA17_Chr3g0144261 34.199 231 141 5 57 282 8 232 7.21e-33 133
Msa0272440 MtrunA17_Chr3g0144261 31.780 236 143 5 286 509 496 725 4.71e-21 97.1
Msa0272440 MtrunA17_Chr5g0407441 34.071 226 144 4 57 279 8 231 8.73e-31 127
Msa0272440 MtrunA17_Chr5g0407441 28.270 237 159 2 287 514 489 723 3.83e-15 78.6
Msa0272440 MtrunA17_Chr5g0404191 30.131 229 153 1 47 275 44 265 8.99e-29 115
Msa0272440 MtrunA17_Chr4g0065351 26.331 338 232 8 171 502 1 327 2.92e-27 112
Msa0272440 MtrunA17_Chr8g0370141 32.719 217 142 4 51 264 2 217 6.29e-27 112
Msa0272440 MtrunA17_Chr3g0146061 33.654 208 126 5 64 264 15 217 7.85e-27 115
Msa0272440 MtrunA17_Chr3g0146061 28.400 250 164 5 270 507 487 733 1.74e-19 92.0
Msa0272440 MtrunA17_Chr7g0273261 32.110 218 140 4 299 514 40 251 1.12e-25 106
Msa0272440 MtrunA17_Chr5g0419321 31.250 208 138 4 75 279 54 259 1.20e-25 111
Msa0272440 MtrunA17_Chr5g0419321 27.354 223 151 2 287 500 515 735 5.07e-14 75.1
Msa0272440 MtrunA17_Chr7g0273271 31.111 225 125 5 25 239 2 206 5.19e-24 100
Msa0272440 MtrunA17_Chr5g0434231 36.364 176 79 4 95 263 1 150 9.23e-24 97.4
Msa0272440 MtrunA17_Chr5g0434261 30.650 323 158 11 214 490 1 303 6.37e-22 96.7
Msa0272440 MtrunA17_Chr5g0434251 42.727 110 56 1 393 502 39 141 5.52e-19 84.0
Msa0272440 MtrunA17_Chr8g0370151 28.319 226 151 2 284 500 125 348 1.32e-15 78.6
Msa0272440 MtrunA17_Chr5g0404181 35.338 133 78 3 376 501 1 132 1.01e-14 71.2
Msa0272440 MtrunA17_Chr2g0319001 26.256 438 259 20 83 495 119 517 6.42e-13 71.2
Msa0272440 MtrunA17_Chr6g0450271 35.156 128 80 2 249 375 32 157 1.99e-12 67.4
Msa0272440 MtrunA17_Chr5g0434241 40.000 85 51 0 291 375 17 101 5.79e-12 62.8
Msa0272440 MtrunA17_Chr1g0186821 22.622 473 297 17 92 512 69 524 5.15e-11 65.1
Msa0272440 MtrunA17_Chr3g0120761 24.123 456 262 18 102 493 76 511 5.80e-11 65.1
Msa0272440 MtrunA17_Chr6g0450291 41.176 85 50 0 291 375 17 101 6.10e-11 61.6
Msa0272440 MtrunA17_Chr6g0450281 43.038 79 45 0 297 375 23 101 6.76e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272440 AT2G20780.1 66.219 521 171 3 5 522 4 522 0.0 692
Msa0272440 AT2G20780.2 68.707 441 136 1 82 522 26 464 0.0 613
Msa0272440 AT3G18830.1 49.495 495 233 5 39 517 22 515 2.41e-164 477
Msa0272440 AT2G16120.1 47.764 492 234 4 46 514 19 510 5.62e-158 460
Msa0272440 AT2G16130.1 46.800 500 247 4 31 511 1 500 1.80e-157 458
Msa0272440 AT4G36670.1 49.580 476 225 3 50 510 14 489 3.85e-156 454
Msa0272440 AT2G18480.1 51.398 465 212 3 50 500 19 483 4.11e-153 447
Msa0272440 AT2G43330.1 34.273 461 286 5 50 501 28 480 3.85e-73 241
Msa0272440 AT5G16150.2 35.565 478 292 8 25 498 75 540 3.65e-72 239
Msa0272440 AT5G16150.1 35.565 478 292 8 25 498 75 540 3.65e-72 239
Msa0272440 AT5G16150.3 35.565 478 292 8 25 498 75 540 3.65e-72 239
Msa0272440 AT5G17010.1 32.465 499 297 13 25 497 15 499 7.23e-67 224
Msa0272440 AT5G17010.3 32.465 499 297 13 25 497 15 499 7.23e-67 224
Msa0272440 AT5G17010.4 32.465 499 297 13 25 497 15 499 7.23e-67 224
Msa0272440 AT1G75220.1 32.072 502 315 9 7 501 5 487 1.12e-66 223
Msa0272440 AT1G19450.1 31.148 488 312 7 21 501 18 488 9.36e-64 216
Msa0272440 AT5G59250.1 31.006 487 305 9 33 497 76 553 1.10e-63 217
Msa0272440 AT1G54730.2 32.877 438 274 8 63 497 42 462 2.91e-62 211
Msa0272440 AT3G03090.1 31.340 485 295 12 38 497 28 499 1.34e-61 210
Msa0272440 AT3G05150.2 33.261 460 280 9 47 499 29 468 1.12e-60 207
Msa0272440 AT3G05150.1 33.189 461 281 9 46 499 28 468 1.15e-60 207
Msa0272440 AT3G05150.3 33.189 461 281 9 46 499 28 468 1.15e-60 207
Msa0272440 AT1G08930.1 29.352 494 306 9 30 502 22 493 2.52e-60 207
Msa0272440 AT1G08930.2 29.352 494 306 9 30 502 22 493 2.52e-60 207
Msa0272440 AT1G30220.1 37.349 332 202 3 52 380 27 355 1.54e-59 207
Msa0272440 AT1G30220.1 45.652 92 50 0 411 502 467 558 3.77e-18 88.2
Msa0272440 AT1G05030.1 32.432 444 281 7 60 498 86 515 9.36e-59 203
Msa0272440 AT5G27350.1 30.579 484 298 12 31 498 1 462 3.94e-57 198
Msa0272440 AT5G27360.1 30.544 478 290 10 36 497 14 465 7.14e-57 197
Msa0272440 AT5G27360.3 30.753 478 289 10 36 497 62 513 2.41e-56 197
Msa0272440 AT3G05165.3 29.713 488 294 12 31 497 1 460 7.03e-56 194
Msa0272440 AT3G05165.2 29.713 488 294 12 31 497 1 460 7.03e-56 194
Msa0272440 AT3G05165.1 29.713 488 294 12 31 497 1 460 7.03e-56 194
Msa0272440 AT2G48020.2 29.536 474 304 8 34 499 9 460 2.23e-55 193
Msa0272440 AT2G48020.1 29.536 474 304 8 34 499 9 460 2.23e-55 193
Msa0272440 AT3G05160.1 29.314 481 287 12 39 497 2 451 5.57e-55 192
Msa0272440 AT5G18840.1 31.277 470 300 9 31 497 26 475 6.31e-55 192
Msa0272440 AT3G05155.1 28.992 476 308 10 31 497 1 455 2.18e-54 190
Msa0272440 AT1G05030.2 32.019 431 274 7 73 498 47 463 3.71e-54 190
Msa0272440 AT1G50310.1 28.450 471 300 12 53 496 26 486 3.44e-53 188
Msa0272440 AT3G19930.1 26.731 520 333 13 38 523 8 513 5.82e-53 187
Msa0272440 AT3G19930.2 26.731 520 333 13 38 523 8 513 5.82e-53 187
Msa0272440 AT3G19940.1 30.297 472 289 13 53 496 26 485 8.77e-53 187
Msa0272440 AT5G26250.1 28.889 495 286 14 44 497 11 480 9.60e-53 187
Msa0272440 AT4G16480.2 33.621 348 218 4 45 384 19 361 1.86e-52 187
Msa0272440 AT4G16480.2 38.835 103 63 0 399 501 459 561 1.14e-13 73.9
Msa0272440 AT4G16480.3 33.621 348 218 4 45 384 19 361 1.86e-52 187
Msa0272440 AT4G16480.3 38.835 103 63 0 399 501 459 561 1.14e-13 73.9
Msa0272440 AT4G16480.1 33.621 348 218 4 45 384 19 361 1.86e-52 187
Msa0272440 AT4G16480.1 38.835 103 63 0 399 501 459 561 1.14e-13 73.9
Msa0272440 AT1G54730.5 30.822 438 262 8 63 497 42 441 1.95e-52 184
Msa0272440 AT2G35740.1 31.858 339 222 4 52 384 25 360 1.70e-51 185
Msa0272440 AT2G35740.1 38.462 91 56 0 411 501 470 560 2.19e-13 73.2
Msa0272440 AT1G54730.3 32.095 377 237 7 81 454 60 420 3.69e-51 181
Msa0272440 AT3G05160.3 29.398 432 257 10 83 497 2 402 2.38e-50 178
Msa0272440 AT3G05160.2 29.398 432 257 10 83 497 2 402 2.38e-50 178
Msa0272440 AT4G04750.1 27.907 473 307 10 49 511 33 481 9.46e-50 178
Msa0272440 AT4G04750.2 27.907 473 307 10 49 511 33 481 9.46e-50 178
Msa0272440 AT1G79820.2 32.207 444 280 8 60 498 61 488 1.21e-49 178
Msa0272440 AT1G79820.1 32.207 444 280 8 60 498 61 488 1.21e-49 178
Msa0272440 AT1G77210.2 26.347 501 315 13 39 502 8 491 1.37e-49 178
Msa0272440 AT1G77210.1 26.347 501 315 13 39 502 8 491 1.37e-49 178
Msa0272440 AT4G04750.3 27.907 473 307 10 49 511 77 525 2.11e-49 178
Msa0272440 AT5G23270.1 27.673 477 300 11 52 496 23 486 2.27e-49 178
Msa0272440 AT4G04760.3 30.023 433 283 9 83 511 2 418 2.79e-49 175
Msa0272440 AT4G04760.1 29.501 461 299 11 55 511 39 477 3.51e-49 176
Msa0272440 AT3G05960.1 28.247 485 284 13 52 497 20 479 1.06e-48 176
Msa0272440 AT1G67300.2 29.058 499 312 13 24 498 8 488 1.32e-48 175
Msa0272440 AT3G05400.1 27.593 482 320 10 31 503 1 462 2.19e-48 174
Msa0272440 AT1G07340.1 29.278 485 304 11 39 496 9 481 5.22e-48 174
Msa0272440 AT1G67300.1 28.800 500 311 13 24 498 8 487 1.25e-47 172
Msa0272440 AT1G67300.3 28.800 500 311 13 24 498 8 487 1.25e-47 172
Msa0272440 AT5G27360.2 31.903 373 216 9 137 497 15 361 7.22e-47 167
Msa0272440 AT5G27360.5 31.903 373 216 9 137 497 15 361 7.22e-47 167
Msa0272440 AT1G08920.1 28.750 480 313 9 29 497 1 462 1.11e-46 169
Msa0272440 AT3G05165.6 29.452 438 275 11 31 454 1 418 3.61e-46 169
Msa0272440 AT5G26340.1 27.254 477 298 10 53 496 24 484 4.87e-46 169
Msa0272440 AT3G05165.4 29.224 438 276 11 31 454 1 418 5.88e-46 167
Msa0272440 AT3G05165.5 29.224 438 276 11 31 454 1 418 5.88e-46 167
Msa0272440 AT1G34580.1 28.392 479 304 13 53 502 25 493 2.16e-45 167
Msa0272440 AT4G02050.2 25.657 495 320 12 34 500 14 488 2.36e-45 167
Msa0272440 AT4G02050.1 25.657 495 320 12 34 500 14 488 2.36e-45 167
Msa0272440 AT1G54730.9 31.232 349 221 7 81 426 60 392 2.81e-45 164
Msa0272440 AT1G54730.7 31.232 349 221 7 81 426 60 392 2.81e-45 164
Msa0272440 AT1G08900.3 28.178 472 304 9 35 497 2 447 1.22e-44 164
Msa0272440 AT1G34580.2 29.710 414 272 9 99 502 39 443 1.30e-44 164
Msa0272440 AT3G20460.1 28.051 467 310 7 34 497 40 483 1.70e-44 164
Msa0272440 AT1G08900.5 28.941 425 272 7 81 497 11 413 2.31e-44 162
Msa0272440 AT1G11260.1 26.415 477 303 11 53 496 24 485 2.75e-44 164
Msa0272440 AT1G08920.2 28.337 487 313 10 29 497 1 469 3.17e-44 163
Msa0272440 AT1G08900.1 28.941 425 272 7 81 497 53 455 3.59e-44 162
Msa0272440 AT1G08900.2 28.941 425 272 7 81 497 53 455 3.59e-44 162
Msa0272440 AT1G08890.1 28.046 435 276 10 81 505 55 462 3.91e-44 162
Msa0272440 AT4G04760.2 28.112 466 296 13 55 511 39 474 3.94e-44 162
Msa0272440 AT1G67300.4 28.539 438 272 13 24 438 8 427 6.71e-44 161
Msa0272440 AT1G67300.5 28.539 438 272 13 24 438 8 427 6.71e-44 161
Msa0272440 AT1G67300.6 28.539 438 272 13 24 438 8 427 1.28e-43 160
Msa0272440 AT1G67300.7 28.539 438 272 13 24 438 8 427 1.28e-43 160
Msa0272440 AT1G79820.4 32.031 384 240 8 60 438 61 428 1.97e-42 157
Msa0272440 AT3G05400.2 26.349 482 306 11 31 503 1 442 4.14e-42 156
Msa0272440 AT1G54730.4 29.708 377 225 7 81 454 60 399 1.27e-41 154
Msa0272440 AT1G50310.2 29.794 339 222 9 165 496 14 343 1.62e-41 153
Msa0272440 AT4G21480.1 24.845 483 316 10 52 502 22 489 1.85e-41 155
Msa0272440 AT5G61520.1 26.044 503 324 14 35 502 4 493 6.75e-41 154
Msa0272440 AT5G27360.4 28.777 417 256 9 36 436 14 405 1.54e-40 152
Msa0272440 AT5G17010.2 28.081 495 250 14 32 497 19 436 2.36e-40 151
Msa0272440 AT1G08920.3 28.504 421 273 8 29 438 1 404 7.08e-38 145
Msa0272440 AT5G61520.2 27.114 402 273 9 108 502 57 445 1.21e-37 144
Msa0272440 AT2G48020.4 28.424 387 251 6 34 415 9 374 7.98e-37 140
Msa0272440 AT1G54730.11 30.195 308 199 5 64 371 43 334 9.82e-37 139
Msa0272440 AT1G77210.3 26.571 350 229 9 165 502 9 342 7.34e-36 137
Msa0272440 AT1G54730.8 28.653 349 209 7 81 426 60 371 7.52e-36 138
Msa0272440 AT3G05155.2 28.613 346 222 8 31 371 1 326 2.36e-35 135
Msa0272440 AT1G08900.4 27.596 366 236 6 81 438 53 397 1.70e-34 135
Msa0272440 AT2G48020.3 28.161 348 224 6 34 376 9 335 5.62e-34 132
Msa0272440 AT1G79820.3 29.054 444 246 8 60 498 61 440 1.90e-33 132
Msa0272440 AT1G20840.2 34.928 209 134 2 57 264 8 215 1.87e-32 132
Msa0272440 AT1G20840.2 31.624 234 147 5 286 509 498 728 7.57e-17 84.3
Msa0272440 AT1G20840.1 34.928 209 134 2 57 264 8 215 1.87e-32 132
Msa0272440 AT1G20840.1 31.624 234 147 5 286 509 498 728 7.57e-17 84.3
Msa0272440 AT1G54730.10 29.643 280 185 4 64 343 43 310 4.01e-32 126
Msa0272440 AT1G54730.6 29.643 280 185 4 64 343 43 310 4.01e-32 126
Msa0272440 AT3G51490.2 32.068 237 152 5 51 282 2 234 6.11e-30 124
Msa0272440 AT3G51490.2 28.448 232 154 3 287 509 500 728 2.58e-19 92.0
Msa0272440 AT3G51490.1 32.068 237 152 5 51 282 2 234 6.76e-30 124
Msa0272440 AT3G51490.1 30.932 236 135 9 287 509 500 720 1.98e-17 86.3
Msa0272440 AT4G35300.9 35.122 205 127 5 64 264 15 217 7.36e-29 121
Msa0272440 AT4G35300.9 29.741 232 151 4 285 507 494 722 1.45e-20 95.9
Msa0272440 AT4G35300.2 35.122 205 127 5 64 264 15 217 7.36e-29 121
Msa0272440 AT4G35300.2 29.741 232 151 4 285 507 494 722 1.45e-20 95.9
Msa0272440 AT4G35300.3 35.122 205 127 5 64 264 15 217 7.36e-29 121
Msa0272440 AT4G35300.3 29.741 232 151 4 285 507 494 722 1.45e-20 95.9
Msa0272440 AT4G35300.4 35.122 205 127 5 64 264 15 217 7.51e-29 121
Msa0272440 AT4G35300.4 29.741 232 151 4 285 507 504 732 1.59e-20 95.9
Msa0272440 AT4G35300.8 35.122 205 127 5 64 264 15 217 7.51e-29 121
Msa0272440 AT4G35300.8 29.741 232 151 4 285 507 504 732 1.59e-20 95.9
Msa0272440 AT4G35300.6 35.122 205 127 5 64 264 15 217 7.51e-29 121
Msa0272440 AT4G35300.6 29.741 232 151 4 285 507 504 732 1.59e-20 95.9
Msa0272440 AT4G35300.11 35.122 205 127 5 64 264 15 217 7.51e-29 121
Msa0272440 AT4G35300.11 29.741 232 151 4 285 507 504 732 1.59e-20 95.9
Msa0272440 AT4G35300.1 35.122 205 127 5 64 264 15 217 7.51e-29 121
Msa0272440 AT4G35300.1 29.741 232 151 4 285 507 504 732 1.59e-20 95.9
Msa0272440 AT4G35300.10 35.122 205 127 5 64 264 15 217 7.51e-29 121
Msa0272440 AT4G35300.10 29.741 232 151 4 285 507 504 732 1.59e-20 95.9
Msa0272440 AT4G35300.7 35.122 205 127 5 64 264 15 217 7.51e-29 121
Msa0272440 AT4G35300.7 29.741 232 151 4 285 507 504 732 1.59e-20 95.9
Msa0272440 AT3G51490.3 36.416 173 107 3 111 282 14 184 9.48e-25 108
Msa0272440 AT3G51490.3 28.448 232 154 3 287 509 450 678 3.35e-19 91.7
Msa0272440 AT4G35300.5 29.741 232 151 4 285 507 307 535 1.21e-20 95.9
Msa0272440 AT1G79820.5 30.435 138 87 4 146 280 87 218 2.56e-12 68.9
Msa0272440 AT1G79820.5 38.194 144 89 0 355 498 235 378 3.59e-12 68.6
Msa0272440 AT2G38940.1 23.503 451 277 14 102 496 76 514 4.36e-12 68.9
Msa0272440 AT5G43340.1 22.348 443 298 13 103 512 82 511 3.46e-11 66.2
Msa0272440 AT3G54700.2 23.195 457 289 15 102 510 76 518 7.52e-11 65.1
Msa0272440 AT3G54700.1 23.195 457 289 15 102 510 76 518 7.52e-11 65.1

Find 149 sgRNAs with CRISPR-Local

Find 226 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCGAGATCTTCATAAATTT+TGG 0.073348 2_3:-3978476 Msa0272440:CDS
TATACTTCTAATCGACAAAT+TGG 0.190272 2_3:-3977958 Msa0272440:CDS
TTTGAGCATAATATCACTTT+TGG 0.229859 2_3:-3978732 Msa0272440:CDS
ACCTATCATCAATACTTTAA+AGG 0.239845 2_3:+3978601 None:intergenic
CCAAACAGGTGGAGCTATTA+TGG 0.253505 2_3:-3978636 Msa0272440:CDS
ATGCATTCGAAGGCCATTTA+TGG 0.256085 2_3:-3977440 Msa0272440:three_prime_UTR
GCAGGTGTAGGTATAGGTTT+TGG 0.256526 2_3:-3978569 Msa0272440:CDS
CTGATTGGATCGGCAGAAAA+TGG 0.270255 2_3:-3978685 Msa0272440:CDS
AGCTTCCATCGCATATAAAT+TGG 0.280896 2_3:-3978415 Msa0272440:CDS
CGCGGAATTGAGGACGAAAA+TGG 0.282013 2_3:+3980080 None:intergenic
TTGGTTGATGTACAAGAAAA+TGG 0.292449 2_3:-3979927 Msa0272440:CDS
ATATGTTGTAAGACCATAAA+TGG 0.297214 2_3:+3977427 None:intergenic
CAATGTTTCCAACAGATTAC+AGG 0.305148 2_3:-3978104 Msa0272440:CDS
TGGAGCAATTATATTCATTC+AGG 0.315786 2_3:-3978801 Msa0272440:CDS
TCTTACAACATATACATAAA+AGG 0.323730 2_3:-3977417 Msa0272440:three_prime_UTR
GTTCGAAGAATGCTTATAAC+TGG 0.323765 2_3:-3978137 Msa0272440:CDS
ACATGCAAAGATATATTTCT+TGG 0.325320 2_3:+3979788 None:intergenic
TTTCTTGGAATCATGCTTCC+TGG 0.326740 2_3:+3979803 None:intergenic
TCTCTCAATTCTGTTCTTCT+CGG 0.326956 2_3:-3979753 Msa0272440:CDS
TATCAAGATGAACACTGTTT+TGG 0.332298 2_3:+3977983 None:intergenic
TGTTGTGTTGCTGTCCTTCA+AGG 0.338124 2_3:-3977326 Msa0272440:three_prime_UTR
ACAAGCCATCTTGGAGATTC+AGG 0.338176 2_3:+3978329 None:intergenic
AGGAATGCTTAGGCCTATAT+TGG 0.339591 2_3:+3977279 None:intergenic
GTTGAGAATGAGTTCATGTT+AGG 0.341913 2_3:-3977138 Msa0272440:three_prime_UTR
GTTGAGAATGAGTTCATGTT+AGG 0.341913 2_3:-3977219 Msa0272440:three_prime_UTR
TTGCTTTACGTGAGCACAAT+TGG 0.342652 2_3:-3977924 Msa0272440:CDS
CACAGTACAAATGAATATTA+AGG 0.342796 2_3:+3977178 None:intergenic
CACAGTACAAATGAATATTA+AGG 0.342796 2_3:+3977259 None:intergenic
GTGATATCTGAGATTCCATT+AGG 0.349886 2_3:-3979888 Msa0272440:CDS
CATCCGAAATATTTCCTTTG+AGG 0.352222 2_3:-3977758 Msa0272440:CDS
TCAATTCCGCGTTTCAGATC+TGG 0.353312 2_3:-3980068 Msa0272440:five_prime_UTR
CCATAATAGCTCCACCTGTT+TGG 0.355673 2_3:+3978636 None:intergenic
TGAGACAAAAGGAAAGAGTT+TGG 0.356792 2_3:-3977568 Msa0272440:CDS
ACAAGAAAGTGAGGTAGAAA+TGG 0.359850 2_3:-3977508 Msa0272440:CDS
ACTACTACCTGCACCAATAT+AGG 0.367057 2_3:-3977292 Msa0272440:three_prime_UTR
TCCGGCTACTGTTATTGCTT+TGG 0.367089 2_3:+3977653 None:intergenic
TTCCAACAAGTACTTCTTGT+TGG 0.367960 2_3:+3978756 None:intergenic
ATACTTCTAATCGACAAATT+GGG 0.373751 2_3:-3977957 Msa0272440:CDS
CCAAAATTTATGAAGATCTC+GGG 0.382190 2_3:+3978476 None:intergenic
ATGAGTTCATGTTAGGTTCA+TGG 0.382650 2_3:-3977131 Msa0272440:three_prime_UTR
ATGAGTTCATGTTAGGTTCA+TGG 0.382650 2_3:-3977212 Msa0272440:three_prime_UTR
CTTGCAGCAACTGTTGCTGT+TGG 0.388423 2_3:-3978011 Msa0272440:CDS
AGCAATGGCAGGAGAAATTT+CGG 0.391255 2_3:+3978520 None:intergenic
TCCAAAATTTATGAAGATCT+CGG 0.399076 2_3:+3978475 None:intergenic
AAGCCTCAAAGGAAATATTT+CGG 0.407884 2_3:+3977755 None:intergenic
CAGAAAATGGACCATTGGTT+TGG 0.410988 2_3:-3978672 Msa0272440:CDS
GAATATTGAAGGAGAACAAT+GGG 0.411042 2_3:-3979951 Msa0272440:exon
TTCTGAGTCACGCAAAAGTT+GGG 0.412048 2_3:-3977860 Msa0272440:CDS
TGCTTTGGTGACGGATAGAA+AGG 0.417425 2_3:+3977668 None:intergenic
ATTCAGAAAGCTGCCGGATC+AGG 0.418552 2_3:-3978221 Msa0272440:CDS
GATGGCTTGTCGTGCAGAAT+AGG 0.431939 2_3:-3978316 Msa0272440:CDS
TTCTGCACGACAAGCCATCT+TGG 0.432465 2_3:+3978320 None:intergenic
AGAGCGCAAGCATCGGCTCT+TGG 0.436062 2_3:-3977732 Msa0272440:CDS
AATTCTGTTCTTCTCGGCTA+TGG 0.438550 2_3:-3979747 Msa0272440:intron
TCCTTTAAAGTATTGATGAT+AGG 0.440619 2_3:-3978602 Msa0272440:CDS
GCAGCACTTATCTTCCAAAC+AGG 0.441980 2_3:-3978650 Msa0272440:CDS
TTGGCGATTCTTGCTGTTTG+TGG 0.442379 2_3:-3977831 Msa0272440:CDS
AAGAAGAAGGGTTGGCAACC+AGG 0.445784 2_3:-3979821 Msa0272440:CDS
AAATTTCTCCTGCCATTGCT+AGG 0.457205 2_3:-3978517 Msa0272440:CDS
TTTCTGAGTCACGCAAAAGT+TGG 0.459893 2_3:-3977861 Msa0272440:CDS
ATGAATATTAAGGAATGCTT+AGG 0.460098 2_3:+3977188 None:intergenic
TGGTGTTGGACTTATTCCTT+CGG 0.468548 2_3:-3978381 Msa0272440:CDS
TACTGTTATTGCTTTGGTGA+CGG 0.469560 2_3:+3977659 None:intergenic
TTCAAGAACGCTGGAATCAC+AGG 0.470468 2_3:-3978047 Msa0272440:CDS
CTCATAGCAGGTGTAGGTAT+AGG 0.470833 2_3:-3978575 Msa0272440:CDS
GAAAGGCCAGTGCGAAGCTC+AGG 0.476021 2_3:+3977880 None:intergenic
ATGAATATTAAGGAATGCTT+AGG 0.477125 2_3:+3977269 None:intergenic
AGTACGAAACAAAAGCTGTC+TGG 0.478339 2_3:-3978187 Msa0272440:CDS
GAGGACGAAAATGGAATTGT+GGG 0.482631 2_3:+3980089 None:intergenic
GAAGAGGAAGAAGAAGAAGA+AGG 0.485542 2_3:-3979834 Msa0272440:CDS
CTCTTGGAGCAGTGGGAAGT+AGG 0.485559 2_3:-3977716 Msa0272440:CDS
CAAGAAAGTGAGGTAGAAAT+GGG 0.486081 2_3:-3977507 Msa0272440:CDS
TAGGACTTGGTCCTATATGT+TGG 0.486328 2_3:-3977788 Msa0272440:CDS
GATGACAGCACCCAACATAT+AGG 0.487155 2_3:+3977777 None:intergenic
GTTATAAGCATTCTTCGAAC+GGG 0.490472 2_3:+3978140 None:intergenic
TATCTATGCCTGTAATCTGT+TGG 0.491983 2_3:+3978096 None:intergenic
TGGTTGATGTACAAGAAAAT+GGG 0.492810 2_3:-3979926 Msa0272440:CDS
CAGCGTTCTTGAAAATCGTC+GGG 0.492924 2_3:+3978057 None:intergenic
TGATATCTGAGATTCCATTA+GGG 0.493739 2_3:-3979887 Msa0272440:CDS
AGAATGCTTATAACTGGTTG+TGG 0.493828 2_3:-3978131 Msa0272440:CDS
CTTATCCGCATTTCCTGATC+CGG 0.495393 2_3:+3978208 None:intergenic
ATGTACAAGAAAATGGGAAT+GGG 0.497578 2_3:-3979920 Msa0272440:CDS
AGATCTGAAACGCGGAATTG+AGG 0.497678 2_3:+3980070 None:intergenic
TACTGTGTTCCTGAGACAAA+AGG 0.499137 2_3:-3977579 Msa0272440:CDS
TGAGGTAGAAATGGGAGATG+TGG 0.499718 2_3:-3977499 Msa0272440:CDS
AATTTCTCCTGCCATTGCTA+GGG 0.500079 2_3:-3978516 Msa0272440:CDS
CAACTATAGAGAAAATTTCA+AGG 0.501451 2_3:+3980014 None:intergenic
AGGACTTGGTCCTATATGTT+GGG 0.502698 2_3:-3977787 Msa0272440:CDS
TGAGGACGAAAATGGAATTG+TGG 0.503386 2_3:+3980088 None:intergenic
CAAGAAAATGGGAATGGGAA+TGG 0.504048 2_3:-3979915 Msa0272440:CDS
ATCGGCAGAAAATGGACCAT+TGG 0.504565 2_3:-3978677 Msa0272440:CDS
GATGTACAAGAAAATGGGAA+TGG 0.506899 2_3:-3979921 Msa0272440:CDS
GTCCAACAAGAAGTACTTGT+TGG 0.512449 2_3:-3978758 Msa0272440:CDS
TTGAAGGAGAACAATGGGGT+TGG 0.516096 2_3:-3979946 Msa0272440:exon
ATTTAGCCTGAGCTTCGCAC+TGG 0.523840 2_3:-3977886 Msa0272440:CDS
CTGGTGGGAAAACATCTGAT+TGG 0.524936 2_3:-3978700 Msa0272440:CDS
GGATTTATTGTGCATGCAGA+GGG 0.529814 2_3:-3977396 Msa0272440:three_prime_UTR
TGGAGAATAATGCTTGGTGT+TGG 0.536202 2_3:-3978395 Msa0272440:CDS
ATTCTCCAATTTATATGCGA+TGG 0.536375 2_3:+3978410 None:intergenic
ATTCTTCGAACGGGAGGAGA+AGG 0.541462 2_3:+3978149 None:intergenic
TATATTGGTGCAGGTAGTAG+TGG 0.541911 2_3:+3977294 None:intergenic
ACCAAAGCAATAACAGTAGC+CGG 0.542438 2_3:-3977654 Msa0272440:CDS
TGAATATTGAAGGAGAACAA+TGG 0.542536 2_3:-3979952 Msa0272440:exon
ATCATCAATACTTTAAAGGA+TGG 0.542648 2_3:+3978605 None:intergenic
AGTGGTGGCTTGAACCTTGA+AGG 0.543627 2_3:+3977312 None:intergenic
AGCAATTATATTCATTCAGG+AGG 0.547695 2_3:-3978798 Msa0272440:CDS
TCTTGGAGCAGTGGGAAGTA+GGG 0.551077 2_3:-3977715 Msa0272440:CDS
GCTTAGGCCTATATTGGTGC+AGG 0.552194 2_3:+3977285 None:intergenic
TATGAAGATCTCGGGGAATG+AGG 0.552564 2_3:+3978484 None:intergenic
CCAGCGTTCTTGAAAATCGT+CGG 0.552776 2_3:+3978056 None:intergenic
GCATCGGCTCTTGGAGCAGT+GGG 0.553185 2_3:-3977723 Msa0272440:CDS
ATGCAGAAGTCATGAGTTTG+TGG 0.553776 2_3:-3977468 Msa0272440:exon
TGTGGCATGCATGCATTCGA+AGG 0.569239 2_3:-3977450 Msa0272440:three_prime_UTR
AGAGATCCCCTAGCAATGGC+AGG 0.572409 2_3:+3978509 None:intergenic
AGCATCGGCTCTTGGAGCAG+TGG 0.573500 2_3:-3977724 Msa0272440:CDS
CAAGAAATTCAGAAAGCTGC+CGG 0.574420 2_3:-3978227 Msa0272440:CDS
TACTTCTAATCGACAAATTG+GGG 0.576351 2_3:-3977956 Msa0272440:CDS
AGTTATAAGCATTCTTCGAA+CGG 0.577290 2_3:+3978139 None:intergenic
TCATACCTGAATCTCCAAGA+TGG 0.577375 2_3:-3978334 Msa0272440:CDS
ATAAATTGGAGAATAATGCT+TGG 0.578937 2_3:-3978401 Msa0272440:CDS
GAAATTTCGGCGATATACAC+AGG 0.580138 2_3:+3978533 None:intergenic
ATGATAGGTAGACTCATAGC+AGG 0.589297 2_3:-3978587 Msa0272440:CDS
ATTGGTGCAGGTAGTAGTGG+TGG 0.590320 2_3:+3977297 None:intergenic
GCAGACGTTGGTGTTATGAG+TGG 0.594610 2_3:-3978821 Msa0272440:intron
AGGATTTATTGTGCATGCAG+AGG 0.595700 2_3:-3977397 Msa0272440:three_prime_UTR
GAAGGACAGCAACACAACAC+TGG 0.596534 2_3:+3977330 None:intergenic
ATTTCTCCTGCCATTGCTAG+GGG 0.597675 2_3:-3978515 Msa0272440:CDS
GGTAGACTCATAGCAGGTGT+AGG 0.602111 2_3:-3978581 Msa0272440:CDS
GAAGTGCTGTTTCAAAATGT+AGG 0.602254 2_3:-3977537 Msa0272440:CDS
GCTTGCGCTCTAAGCCTCAA+AGG 0.604702 2_3:+3977744 None:intergenic
CATTAGGATGACATCTGAAG+AGG 0.604944 2_3:-3979850 Msa0272440:CDS
GGGAAAACATCTGATTGGAT+CGG 0.604986 2_3:-3978695 Msa0272440:CDS
GATAAGTGCTGCCAAACCAA+TGG 0.606368 2_3:+3978661 None:intergenic
GCACTTATCTTCCAAACAGG+TGG 0.615544 2_3:-3978647 Msa0272440:CDS
CGCAAAAGTTGGGATCGCGT+TGG 0.626607 2_3:-3977850 Msa0272440:CDS
CAAAATTTATGAAGATCTCG+GGG 0.630185 2_3:+3978477 None:intergenic
ATAAGCATTCTTCGAACGGG+AGG 0.630988 2_3:+3978143 None:intergenic
GAGGCTTAGAGCGCAAGCAT+CGG 0.636848 2_3:-3977739 Msa0272440:CDS
GGTGAGAGATCCCCTAGCAA+TGG 0.643972 2_3:+3978505 None:intergenic
ATTGTGCTCACGTAAAGCAA+AGG 0.645406 2_3:+3977927 None:intergenic
AGCTGCCGGATCAGGAAATG+CGG 0.649308 2_3:-3978213 Msa0272440:CDS
AGGTGAATCACAAGAAAGTG+AGG 0.651946 2_3:-3977517 Msa0272440:CDS
GTGGGAAGTAGGGTAAGCAG+CGG 0.661624 2_3:-3977705 Msa0272440:CDS
AATATTGAAGGAGAACAATG+GGG 0.673727 2_3:-3979950 Msa0272440:exon
GCGACGGCAATAACAACCGA+AGG 0.681562 2_3:+3978365 None:intergenic
GGAGGATTTGAAGATAACAG+AGG 0.694335 2_3:-3978780 Msa0272440:CDS
GGTGACGGATAGAAAGGACA+TGG 0.696191 2_3:+3977674 None:intergenic
AGGACGAAAATGGAATTGTG+GGG 0.696299 2_3:+3980090 None:intergenic
ATTCTTCCAGATCTGAAACG+CGG 0.715519 2_3:+3980062 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAAATCATCTATTTA+GGG + chr2_3:3977560-3977579 None:intergenic 10.0%
!! AATATATAAATCATCTATTT+AGG + chr2_3:3977561-3977580 None:intergenic 10.0%
!!! AATAGATGATTTATATATTT+TGG - chr2_3:3977562-3977581 Msa0272440:CDS 10.0%
!!! AATTTTGAAACATAAAATTA+GGG + chr2_3:3977667-3977686 None:intergenic 10.0%
!! AAAAAAGAATTGAATATTGA+AGG - chr2_3:3977214-3977233 Msa0272440:three_prime_UTR 15.0%
!!! TGATACTTTAATTTTATTGT+TGG - chr2_3:3977492-3977511 Msa0272440:CDS 15.0%
!! TATATAAATCATCTATTTAG+GGG + chr2_3:3977559-3977578 None:intergenic 15.0%
!!! GATTTATATATTTTGGTTAT+AGG - chr2_3:3977569-3977588 Msa0272440:CDS 15.0%
!!! CAATTTTGAAACATAAAATT+AGG + chr2_3:3977668-3977687 None:intergenic 15.0%
!! GTAATTATCATTAAATAACT+TGG + chr2_3:3978252-3978271 None:intergenic 15.0%
!! ATATAAATCATCTATTTAGG+GGG + chr2_3:3977558-3977577 None:intergenic 20.0%
!! CAATGATATGTATAAAATAC+CGG - chr2_3:3977616-3977635 Msa0272440:CDS 20.0%
!! AATGATATGTATAAAATACC+GGG - chr2_3:3977617-3977636 Msa0272440:CDS 20.0%
!! ATTAAATTACACAAAAAACC+CGG + chr2_3:3977638-3977657 None:intergenic 20.0%
!! TTTATGTTTCAAAATTGAGA+TGG - chr2_3:3977671-3977690 Msa0272440:CDS 20.0%
!!! TCCTTTTGCTTAAATAATAT+AGG - chr2_3:3978125-3978144 Msa0272440:CDS 20.0%
!! AAACATAGATAACTTAAATC+TGG - chr2_3:3978177-3978196 Msa0272440:CDS 20.0%
!!! ATAAATTTTGGAATTCTTCT+TGG - chr2_3:3978712-3978731 Msa0272440:CDS 20.0%
!!! AATTTCTTGCAATTTTTCTT+CGG + chr2_3:3978938-3978957 None:intergenic 20.0%
!! TCTTACAACATATACATAAA+AGG - chr2_3:3979759-3979778 Msa0272440:CDS 20.0%
! CAACTATAGAGAAAATTTCA+AGG + chr2_3:3977165-3977184 None:intergenic 25.0%
!!! TACTTATTTTTAGTCCCTAA+TGG + chr2_3:3977306-3977325 None:intergenic 25.0%
! GGACTAAAAATAAGTACATT+AGG - chr2_3:3977310-3977329 Msa0272440:three_prime_UTR 25.0%
! ACATGCAAAGATATATTTCT+TGG + chr2_3:3977391-3977410 None:intergenic 25.0%
!!! TTTTGGTTATAGGATTTATG+TGG - chr2_3:3977579-3977598 Msa0272440:CDS 25.0%
! AATCATGTCTAGATATAATG+TGG - chr2_3:3977722-3977741 Msa0272440:CDS 25.0%
! TACCCAACTTTAACAATAAA+CGG - chr2_3:3977850-3977869 Msa0272440:CDS 25.0%
!!! CAATAATAGTTTTACAAGTG+AGG + chr2_3:3978059-3978078 None:intergenic 25.0%
!!! TCCATTTATTAACTTGTAGA+TGG - chr2_3:3978081-3978100 Msa0272440:CDS 25.0%
! ACCATCTACAAGTTAATAAA+TGG + chr2_3:3978085-3978104 None:intergenic 25.0%
! GCCTATATTATTTAAGCAAA+AGG + chr2_3:3978129-3978148 None:intergenic 25.0%
! TTAAATAACTTGGTACAACA+TGG + chr2_3:3978242-3978261 None:intergenic 25.0%
!! TTTGAGCATAATATCACTTT+TGG - chr2_3:3978444-3978463 Msa0272440:CDS 25.0%
!!! TTGAGCATAATATCACTTTT+GGG - chr2_3:3978445-3978464 Msa0272440:CDS 25.0%
!! ATCATCAATACTTTAAAGGA+TGG + chr2_3:3978574-3978593 None:intergenic 25.0%
!!! TCCTTTAAAGTATTGATGAT+AGG - chr2_3:3978574-3978593 Msa0272440:CDS 25.0%
! ACCTATCATCAATACTTTAA+AGG + chr2_3:3978578-3978597 None:intergenic 25.0%
! TCCAAAATTTATGAAGATCT+CGG + chr2_3:3978704-3978723 None:intergenic 25.0%
! ATAAATTGGAGAATAATGCT+TGG - chr2_3:3978775-3978794 Msa0272440:CDS 25.0%
! TATACTTCTAATCGACAAAT+TGG - chr2_3:3979218-3979237 Msa0272440:intron 25.0%
! ATACTTCTAATCGACAAATT+GGG - chr2_3:3979219-3979238 Msa0272440:intron 25.0%
!!! AATGTAGCTTCTTTTTCAAT+AGG - chr2_3:3979369-3979388 Msa0272440:intron 25.0%
! ATATGTTGTAAGACCATAAA+TGG + chr2_3:3979752-3979771 None:intergenic 25.0%
! ATGAATATTAAGGAATGCTT+AGG + chr2_3:3979910-3979929 None:intergenic 25.0%
! CACAGTACAAATGAATATTA+AGG + chr2_3:3979920-3979939 None:intergenic 25.0%
! ATGAATATTAAGGAATGCTT+AGG + chr2_3:3979910-3979929 None:intergenic 25.0%
! CACAGTACAAATGAATATTA+AGG + chr2_3:3979920-3979939 None:intergenic 25.0%
!! AGCTATAATGCACATTTTAA+AGG - chr2_3:3980068-3980087 Msa0272440:five_prime_UTR 25.0%
TGAATATTGAAGGAGAACAA+TGG - chr2_3:3977224-3977243 Msa0272440:three_prime_UTR 30.0%
GAATATTGAAGGAGAACAAT+GGG - chr2_3:3977225-3977244 Msa0272440:three_prime_UTR 30.0%
AATATTGAAGGAGAACAATG+GGG - chr2_3:3977226-3977245 Msa0272440:three_prime_UTR 30.0%
! TTGGTTGATGTACAAGAAAA+TGG - chr2_3:3977249-3977268 Msa0272440:three_prime_UTR 30.0%
! TGGTTGATGTACAAGAAAAT+GGG - chr2_3:3977250-3977269 Msa0272440:three_prime_UTR 30.0%
ATGTACAAGAAAATGGGAAT+GGG - chr2_3:3977256-3977275 Msa0272440:three_prime_UTR 30.0%
! TGATATCTGAGATTCCATTA+GGG - chr2_3:3977289-3977308 Msa0272440:three_prime_UTR 30.0%
!! GCATTTTAAGAATGTTGTAG+AGG - chr2_3:3977693-3977712 Msa0272440:CDS 30.0%
! TGGATAAGTGTTGTTAATAG+TGG - chr2_3:3977742-3977761 Msa0272440:CDS 30.0%
TACTGTATAGTACAAAGTTC+TGG - chr2_3:3977930-3977949 Msa0272440:CDS 30.0%
ACTTAAATCTGGTAATCGAT+AGG - chr2_3:3978188-3978207 Msa0272440:CDS 30.0%
AACAAGAAACTAATAGGTTC+TGG + chr2_3:3978214-3978233 None:intergenic 30.0%
AATTACTACATAAACATCGC+TGG - chr2_3:3978266-3978285 Msa0272440:CDS 30.0%
TGGAGCAATTATATTCATTC+AGG - chr2_3:3978375-3978394 Msa0272440:CDS 30.0%
AGCAATTATATTCATTCAGG+AGG - chr2_3:3978378-3978397 Msa0272440:CDS 30.0%
CAAAATTTATGAAGATCTCG+GGG + chr2_3:3978702-3978721 None:intergenic 30.0%
CCAAAATTTATGAAGATCTC+GGG + chr2_3:3978703-3978722 None:intergenic 30.0%
ATTCTCCAATTTATATGCGA+TGG + chr2_3:3978769-3978788 None:intergenic 30.0%
AGTTATAAGCATTCTTCGAA+CGG + chr2_3:3979040-3979059 None:intergenic 30.0%
! TATCAAGATGAACACTGTTT+TGG + chr2_3:3979196-3979215 None:intergenic 30.0%
TACTTCTAATCGACAAATTG+GGG - chr2_3:3979220-3979239 Msa0272440:intron 30.0%
AAGCCTCAAAGGAAATATTT+CGG + chr2_3:3979424-3979443 None:intergenic 30.0%
ACCAAAAACAAAGAAAGTTC+CGG + chr2_3:3979544-3979563 None:intergenic 30.0%
GATGTACAAGAAAATGGGAA+TGG - chr2_3:3977255-3977274 Msa0272440:three_prime_UTR 35.0%
! GTGATATCTGAGATTCCATT+AGG - chr2_3:3977288-3977307 Msa0272440:three_prime_UTR 35.0%
AAGAGGAAGAAGAAGAAGAA+GGG - chr2_3:3977343-3977362 Msa0272440:three_prime_UTR 35.0%
TCTCTCAATTCTGTTCTTCT+CGG - chr2_3:3977423-3977442 Msa0272440:three_prime_UTR 35.0%
CGCCGTTTATTGTTAAAGTT+GGG + chr2_3:3977855-3977874 None:intergenic 35.0%
CCAACTTTAACAATAAACGG+CGG - chr2_3:3977853-3977872 Msa0272440:CDS 35.0%
ATCATAGCACTGTTATACGT+CGG - chr2_3:3977973-3977992 Msa0272440:CDS 35.0%
! GCTACTTTAAGAAACTCTGA+CGG - chr2_3:3978152-3978171 Msa0272440:CDS 35.0%
GTTGCGAACAAGAAACTAAT+AGG + chr2_3:3978220-3978239 None:intergenic 35.0%
CTGCAAAATGAAAAGCAAGA+TGG + chr2_3:3978339-3978358 None:intergenic 35.0%
TTCCAACAAGTACTTCTTGT+TGG + chr2_3:3978423-3978442 None:intergenic 35.0%
! CCCGAGATCTTCATAAATTT+TGG - chr2_3:3978700-3978719 Msa0272440:CDS 35.0%
AGCTTCCATCGCATATAAAT+TGG - chr2_3:3978761-3978780 Msa0272440:CDS 35.0%
GTTATAAGCATTCTTCGAAC+GGG + chr2_3:3979039-3979058 None:intergenic 35.0%
GTTCGAAGAATGCTTATAAC+TGG - chr2_3:3979039-3979058 Msa0272440:intron 35.0%
AGAATGCTTATAACTGGTTG+TGG - chr2_3:3979045-3979064 Msa0272440:intron 35.0%
CAATGTTTCCAACAGATTAC+AGG - chr2_3:3979072-3979091 Msa0272440:intron 35.0%
TATCTATGCCTGTAATCTGT+TGG + chr2_3:3979083-3979102 None:intergenic 35.0%
!!! GCTTCTTTTTCAATAGGACT+TGG - chr2_3:3979375-3979394 Msa0272440:intron 35.0%
CATCCGAAATATTTCCTTTG+AGG - chr2_3:3979418-3979437 Msa0272440:intron 35.0%
TACTGTTATTGCTTTGGTGA+CGG + chr2_3:3979520-3979539 None:intergenic 35.0%
! AAACTCTTTCCTTTTGTCTC+AGG + chr2_3:3979609-3979628 None:intergenic 35.0%
TGAGACAAAAGGAAAGAGTT+TGG - chr2_3:3979608-3979627 Msa0272440:intron 35.0%
!! GAAGTGCTGTTTCAAAATGT+AGG - chr2_3:3979639-3979658 Msa0272440:intron 35.0%
ACAAGAAAGTGAGGTAGAAA+TGG - chr2_3:3979668-3979687 Msa0272440:intron 35.0%
CAAGAAAGTGAGGTAGAAAT+GGG - chr2_3:3979669-3979688 Msa0272440:intron 35.0%
GTTGAGAATGAGTTCATGTT+AGG - chr2_3:3979957-3979976 Msa0272440:five_prime_UTR 35.0%
ATGAGTTCATGTTAGGTTCA+TGG - chr2_3:3979964-3979983 Msa0272440:five_prime_UTR 35.0%
GTTGAGAATGAGTTCATGTT+AGG - chr2_3:3979957-3979976 Msa0272440:five_prime_UTR 35.0%
ATGAGTTCATGTTAGGTTCA+TGG - chr2_3:3979964-3979983 Msa0272440:five_prime_UTR 35.0%
AGGACGAAAATGGAATTGTG+GGG + chr2_3:3977089-3977108 None:intergenic 40.0%
GAGGACGAAAATGGAATTGT+GGG + chr2_3:3977090-3977109 None:intergenic 40.0%
TGAGGACGAAAATGGAATTG+TGG + chr2_3:3977091-3977110 None:intergenic 40.0%
! ATTCTTCCAGATCTGAAACG+CGG + chr2_3:3977117-3977136 None:intergenic 40.0%
CAAGAAAATGGGAATGGGAA+TGG - chr2_3:3977261-3977280 Msa0272440:three_prime_UTR 40.0%
CATTAGGATGACATCTGAAG+AGG - chr2_3:3977326-3977345 Msa0272440:three_prime_UTR 40.0%
GAAGAGGAAGAAGAAGAAGA+AGG - chr2_3:3977342-3977361 Msa0272440:three_prime_UTR 40.0%
TTTCTTGGAATCATGCTTCC+TGG + chr2_3:3977376-3977395 None:intergenic 40.0%
AATTCTGTTCTTCTCGGCTA+TGG - chr2_3:3977429-3977448 Msa0272440:three_prime_UTR 40.0%
CCGCCGTTTATTGTTAAAGT+TGG + chr2_3:3977856-3977875 None:intergenic 40.0%
ACAGTGCTATGATGTTGTCA+TGG + chr2_3:3977966-3977985 None:intergenic 40.0%
ATGAAAAGCAAGATGGCAAG+TGG + chr2_3:3978332-3978351 None:intergenic 40.0%
! GCTTTTCATTTTGCAGACGT+TGG - chr2_3:3978343-3978362 Msa0272440:CDS 40.0%
GGAGGATTTGAAGATAACAG+AGG - chr2_3:3978396-3978415 Msa0272440:CDS 40.0%
!! GTCCAACAAGAAGTACTTGT+TGG - chr2_3:3978418-3978437 Msa0272440:CDS 40.0%
!! TCACTTTTGGGTAGTTTAGC+TGG - chr2_3:3978457-3978476 Msa0272440:CDS 40.0%
!! TTTTGGGTAGTTTAGCTGGT+GGG - chr2_3:3978461-3978480 Msa0272440:CDS 40.0%
GGGAAAACATCTGATTGGAT+CGG - chr2_3:3978481-3978500 Msa0272440:CDS 40.0%
! CAGAAAATGGACCATTGGTT+TGG - chr2_3:3978504-3978523 Msa0272440:CDS 40.0%
ATGATAGGTAGACTCATAGC+AGG - chr2_3:3978589-3978608 Msa0272440:CDS 40.0%
! CAGGTGTAGGTATAGGTTTT+GGG - chr2_3:3978608-3978627 Msa0272440:CDS 40.0%
! AGGTGTAGGTATAGGTTTTG+GGG - chr2_3:3978609-3978628 Msa0272440:CDS 40.0%
GAAATTTCGGCGATATACAC+AGG + chr2_3:3978646-3978665 None:intergenic 40.0%
AGCAATGGCAGGAGAAATTT+CGG + chr2_3:3978659-3978678 None:intergenic 40.0%
AAATTTCTCCTGCCATTGCT+AGG - chr2_3:3978659-3978678 Msa0272440:CDS 40.0%
AATTTCTCCTGCCATTGCTA+GGG - chr2_3:3978660-3978679 Msa0272440:CDS 40.0%
!! TGGAGAATAATGCTTGGTGT+TGG - chr2_3:3978781-3978800 Msa0272440:CDS 40.0%
! TGGTGTTGGACTTATTCCTT+CGG - chr2_3:3978795-3978814 Msa0272440:CDS 40.0%
! AGGTATGATAAAAAGCGCGA+CGG + chr2_3:3978830-3978849 None:intergenic 40.0%
TCATACCTGAATCTCCAAGA+TGG - chr2_3:3978842-3978861 Msa0272440:intron 40.0%
CAAGAAATTCAGAAAGCTGC+CGG - chr2_3:3978949-3978968 Msa0272440:intron 40.0%
AGTACGAAACAAAAGCTGTC+TGG - chr2_3:3978989-3979008 Msa0272440:intron 40.0%
ATTGTGCTCACGTAAAGCAA+AGG + chr2_3:3979252-3979271 None:intergenic 40.0%
TTGCTTTACGTGAGCACAAT+TGG - chr2_3:3979252-3979271 Msa0272440:intron 40.0%
! AACTTTTGCGTGACTCAGAA+AGG + chr2_3:3979316-3979335 None:intergenic 40.0%
TTTCTGAGTCACGCAAAAGT+TGG - chr2_3:3979315-3979334 Msa0272440:intron 40.0%
TTCTGAGTCACGCAAAAGTT+GGG - chr2_3:3979316-3979335 Msa0272440:intron 40.0%
! TAGGACTTGGTCCTATATGT+TGG - chr2_3:3979388-3979407 Msa0272440:intron 40.0%
! AGGACTTGGTCCTATATGTT+GGG - chr2_3:3979389-3979408 Msa0272440:intron 40.0%
ACCAAAGCAATAACAGTAGC+CGG - chr2_3:3979522-3979541 Msa0272440:intron 40.0%
!!! GCCGGAACTTTCTTTGTTTT+TGG - chr2_3:3979540-3979559 Msa0272440:intron 40.0%
TACTGTGTTCCTGAGACAAA+AGG - chr2_3:3979597-3979616 Msa0272440:intron 40.0%
AGGTGAATCACAAGAAAGTG+AGG - chr2_3:3979659-3979678 Msa0272440:intron 40.0%
ATGCAGAAGTCATGAGTTTG+TGG - chr2_3:3979708-3979727 Msa0272440:intron 40.0%
ATGCATTCGAAGGCCATTTA+TGG - chr2_3:3979736-3979755 Msa0272440:intron 40.0%
AGGATTTATTGTGCATGCAG+AGG - chr2_3:3979779-3979798 Msa0272440:CDS 40.0%
GGATTTATTGTGCATGCAGA+GGG - chr2_3:3979780-3979799 Msa0272440:CDS 40.0%
TATATTGGTGCAGGTAGTAG+TGG + chr2_3:3979885-3979904 None:intergenic 40.0%
ACTACTACCTGCACCAATAT+AGG - chr2_3:3979884-3979903 Msa0272440:CDS 40.0%
AGGAATGCTTAGGCCTATAT+TGG + chr2_3:3979900-3979919 None:intergenic 40.0%
! AGATCTGAAACGCGGAATTG+AGG + chr2_3:3977109-3977128 None:intergenic 45.0%
TCAATTCCGCGTTTCAGATC+TGG - chr2_3:3977108-3977127 Msa0272440:three_prime_UTR 45.0%
TTGAAGGAGAACAATGGGGT+TGG - chr2_3:3977230-3977249 Msa0272440:three_prime_UTR 45.0%
GGAAGAAGAAGAAGAAGGGT+TGG - chr2_3:3977347-3977366 Msa0272440:three_prime_UTR 45.0%
AATAGAGTTTGCCGCCCATT+TGG - chr2_3:3977777-3977796 Msa0272440:CDS 45.0%
ATAGAGTTTGCCGCCCATTT+GGG - chr2_3:3977778-3977797 Msa0272440:CDS 45.0%
TTAACAATAAACGGCGGCTG+TGG - chr2_3:3977859-3977878 Msa0272440:CDS 45.0%
CGCAATTGACAACACTGATG+TGG - chr2_3:3978026-3978045 Msa0272440:CDS 45.0%
!! CTTTTGGGTAGTTTAGCTGG+TGG - chr2_3:3978460-3978479 Msa0272440:CDS 45.0%
CTGGTGGGAAAACATCTGAT+TGG - chr2_3:3978476-3978495 Msa0272440:CDS 45.0%
CTGATTGGATCGGCAGAAAA+TGG - chr2_3:3978491-3978510 Msa0272440:CDS 45.0%
ATCGGCAGAAAATGGACCAT+TGG - chr2_3:3978499-3978518 Msa0272440:CDS 45.0%
! GATAAGTGCTGCCAAACCAA+TGG + chr2_3:3978518-3978537 None:intergenic 45.0%
GCAGCACTTATCTTCCAAAC+AGG - chr2_3:3978526-3978545 Msa0272440:CDS 45.0%
GCACTTATCTTCCAAACAGG+TGG - chr2_3:3978529-3978548 Msa0272440:CDS 45.0%
CCATAATAGCTCCACCTGTT+TGG + chr2_3:3978543-3978562 None:intergenic 45.0%
CCAAACAGGTGGAGCTATTA+TGG - chr2_3:3978540-3978559 Msa0272440:CDS 45.0%
CTCATAGCAGGTGTAGGTAT+AGG - chr2_3:3978601-3978620 Msa0272440:CDS 45.0%
! GCAGGTGTAGGTATAGGTTT+TGG - chr2_3:3978607-3978626 Msa0272440:CDS 45.0%
ATTTCTCCTGCCATTGCTAG+GGG - chr2_3:3978661-3978680 Msa0272440:CDS 45.0%
TATGAAGATCTCGGGGAATG+AGG + chr2_3:3978695-3978714 None:intergenic 45.0%
ACAAGCCATCTTGGAGATTC+AGG + chr2_3:3978850-3978869 None:intergenic 45.0%
CTTATCCGCATTTCCTGATC+CGG + chr2_3:3978971-3978990 None:intergenic 45.0%
ATAAGCATTCTTCGAACGGG+AGG + chr2_3:3979036-3979055 None:intergenic 45.0%
CAGCGTTCTTGAAAATCGTC+GGG + chr2_3:3979122-3979141 None:intergenic 45.0%
CCAGCGTTCTTGAAAATCGT+CGG + chr2_3:3979123-3979142 None:intergenic 45.0%
TTCAAGAACGCTGGAATCAC+AGG - chr2_3:3979129-3979148 Msa0272440:intron 45.0%
!! TTGGCGATTCTTGCTGTTTG+TGG - chr2_3:3979345-3979364 Msa0272440:intron 45.0%
GATGACAGCACCCAACATAT+AGG + chr2_3:3979402-3979421 None:intergenic 45.0%
!! TGCTTTGGTGACGGATAGAA+AGG + chr2_3:3979511-3979530 None:intergenic 45.0%
TCCGGCTACTGTTATTGCTT+TGG + chr2_3:3979526-3979545 None:intergenic 45.0%
TGAGGTAGAAATGGGAGATG+TGG - chr2_3:3979677-3979696 Msa0272440:intron 45.0%
! TGTTGTGTTGCTGTCCTTCA+AGG - chr2_3:3979850-3979869 Msa0272440:CDS 45.0%
CGCGGAATTGAGGACGAAAA+TGG + chr2_3:3977099-3977118 None:intergenic 50.0%
! AAGAAGAAGGGTTGGCAACC+AGG - chr2_3:3977355-3977374 Msa0272440:three_prime_UTR 50.0%
CTGTTCTTCTCGGCTATGGT+AGG - chr2_3:3977433-3977452 Msa0272440:three_prime_UTR 50.0%
! GAGCTTTGTGGGACCCAAAT+GGG + chr2_3:3977794-3977813 None:intergenic 50.0%
! ACTAGTCCCTCGAGCTTTGT+GGG + chr2_3:3977805-3977824 None:intergenic 50.0%
!! GCAGACGTTGGTGTTATGAG+TGG - chr2_3:3978355-3978374 Msa0272440:CDS 50.0%
GGTAGACTCATAGCAGGTGT+AGG - chr2_3:3978595-3978614 Msa0272440:CDS 50.0%
TTCTGCACGACAAGCCATCT+TGG + chr2_3:3978859-3978878 None:intergenic 50.0%
! GATGGCTTGTCGTGCAGAAT+AGG - chr2_3:3978860-3978879 Msa0272440:intron 50.0%
ATTCAGAAAGCTGCCGGATC+AGG - chr2_3:3978955-3978974 Msa0272440:intron 50.0%
ATTCTTCGAACGGGAGGAGA+AGG + chr2_3:3979030-3979049 None:intergenic 50.0%
!! CCGACGATTTTCAAGAACGC+TGG - chr2_3:3979120-3979139 Msa0272440:intron 50.0%
CTTGCAGCAACTGTTGCTGT+TGG - chr2_3:3979165-3979184 Msa0272440:intron 50.0%
ATTTAGCCTGAGCTTCGCAC+TGG - chr2_3:3979290-3979309 Msa0272440:intron 50.0%
TCTTGGAGCAGTGGGAAGTA+GGG - chr2_3:3979461-3979480 Msa0272440:intron 50.0%
!! GGTGACGGATAGAAAGGACA+TGG + chr2_3:3979505-3979524 None:intergenic 50.0%
TGTGGCATGCATGCATTCGA+AGG - chr2_3:3979726-3979745 Msa0272440:intron 50.0%
GAAGGACAGCAACACAACAC+TGG + chr2_3:3979849-3979868 None:intergenic 50.0%
AGTGGTGGCTTGAACCTTGA+AGG + chr2_3:3979867-3979886 None:intergenic 50.0%
ATTGGTGCAGGTAGTAGTGG+TGG + chr2_3:3979882-3979901 None:intergenic 50.0%
GCTTAGGCCTATATTGGTGC+AGG + chr2_3:3979894-3979913 None:intergenic 50.0%
CTTTGTGGGACCCAAATGGG+CGG + chr2_3:3977791-3977810 None:intergenic 55.0%
! CGAGCTTTGTGGGACCCAAA+TGG + chr2_3:3977795-3977814 None:intergenic 55.0%
TTTGGGTCCCACAAAGCTCG+AGG - chr2_3:3977795-3977814 Msa0272440:CDS 55.0%
TTGGGTCCCACAAAGCTCGA+GGG - chr2_3:3977796-3977815 Msa0272440:CDS 55.0%
! GACTAGTCCCTCGAGCTTTG+TGG + chr2_3:3977806-3977825 None:intergenic 55.0%
AGAGATCCCCTAGCAATGGC+AGG + chr2_3:3978670-3978689 None:intergenic 55.0%
GGTGAGAGATCCCCTAGCAA+TGG + chr2_3:3978674-3978693 None:intergenic 55.0%
GCGACGGCAATAACAACCGA+AGG + chr2_3:3978814-3978833 None:intergenic 55.0%
AGCTGCCGGATCAGGAAATG+CGG - chr2_3:3978963-3978982 Msa0272440:intron 55.0%
CGCAAAAGTTGGGATCGCGT+TGG - chr2_3:3979326-3979345 Msa0272440:intron 55.0%
! GCTTGCGCTCTAAGCCTCAA+AGG + chr2_3:3979435-3979454 None:intergenic 55.0%
GAGGCTTAGAGCGCAAGCAT+CGG - chr2_3:3979437-3979456 Msa0272440:intron 55.0%
CTCTTGGAGCAGTGGGAAGT+AGG - chr2_3:3979460-3979479 Msa0272440:intron 55.0%
GTGGGAAGTAGGGTAAGCAG+CGG - chr2_3:3979471-3979490 Msa0272440:intron 55.0%
GAAAGGCCAGTGCGAAGCTC+AGG + chr2_3:3979299-3979318 None:intergenic 60.0%
!! AGAGCGCAAGCATCGGCTCT+TGG - chr2_3:3979444-3979463 Msa0272440:intron 60.0%
!! AGCATCGGCTCTTGGAGCAG+TGG - chr2_3:3979452-3979471 Msa0272440:intron 60.0%
!! GCATCGGCTCTTGGAGCAGT+GGG - chr2_3:3979453-3979472 Msa0272440:intron 60.0%
CTAGTCTCCGCAGTTGCGCG+CGG - chr2_3:3977820-3977839 Msa0272440:CDS 65.0%
TCATCCGCCGCGCGCAACTG+CGG + chr2_3:3977830-3977849 None:intergenic 70.0%
GTCTCCGCAGTTGCGCGCGG+CGG - chr2_3:3977823-3977842 Msa0272440:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 3977053 3980145 3977053 ID=Msa0272440;Name=Msa0272440
chr2_3 mRNA 3977053 3980145 3977053 ID=Msa0272440-mRNA-1;Parent=Msa0272440;Name=Msa0272440-mRNA-1;_AED=0.02;_eAED=0.02;_QI=190|1|1|1|1|1|2|423|523
chr2_3 exon 3977053 3978839 3977053 ID=Msa0272440-mRNA-1:exon:1991;Parent=Msa0272440-mRNA-1
chr2_3 exon 3979748 3980145 3979748 ID=Msa0272440-mRNA-1:exon:1990;Parent=Msa0272440-mRNA-1
chr2_3 five_prime_UTR 3979956 3980145 3979956 ID=Msa0272440-mRNA-1:five_prime_utr;Parent=Msa0272440-mRNA-1
chr2_3 CDS 3979748 3979955 3979748 ID=Msa0272440-mRNA-1:cds;Parent=Msa0272440-mRNA-1
chr2_3 CDS 3977476 3978839 3977476 ID=Msa0272440-mRNA-1:cds;Parent=Msa0272440-mRNA-1
chr2_3 three_prime_UTR 3977053 3977475 3977053 ID=Msa0272440-mRNA-1:three_prime_utr;Parent=Msa0272440-mRNA-1
Gene Sequence

>Msa0272440

ATGGGGTTGGTTGATGTACAAGAAAATGGGAATGGGAATGGAGATGTGATATCTGAGATTCCATTAGGGACTAAAAATAAGTACATTAGGATGACATCTGAAGAGGAAGAAGAAGAAGAAGGGTTGGCAACCAGGAAGCATGATTCCAAGAAATATATCTTTGCATGTGCTGTTTTTGCTTCTCTCAATTCTGTTCTTCTCGGCTATGACGTTGGTGTTATGAGTGGAGCAATTATATTCATTCAGGAGGATTTGAAGATAACAGAGGTCCAACAAGAAGTACTTGTTGGAATTTTGAGCATAATATCACTTTTGGGTAGTTTAGCTGGTGGGAAAACATCTGATTGGATCGGCAGAAAATGGACCATTGGTTTGGCAGCACTTATCTTCCAAACAGGTGGAGCTATTATGGCTCTTGCTCCATCCTTTAAAGTATTGATGATAGGTAGACTCATAGCAGGTGTAGGTATAGGTTTTGGGGTCATGATTGCACCTGTGTATATCGCCGAAATTTCTCCTGCCATTGCTAGGGGATCTCTCACCTCATTCCCCGAGATCTTCATAAATTTTGGAATTCTTCTTGGCTACATATCAAACTATGCGTTTTCTAAGCTTCCATCGCATATAAATTGGAGAATAATGCTTGGTGTTGGACTTATTCCTTCGGTTGTTATTGCCGTCGCGCTTTTTATCATACCTGAATCTCCAAGATGGCTTGTCGTGCAGAATAGGATTGAAGAAGCTAAACTAGTGCTGTCAAAGATAAGCGAAAGTGAGAAAGATGCCGAAGAAAAATTGCAAGAAATTCAGAAAGCTGCCGGATCAGGAAATGCGGATAAGTACGAAACAAAAGCTGTCTGGAAAGAAATTTTGTATCCTTCTCCTCCCGTTCGAAGAATGCTTATAACTGGTTGTGGAATTCAATGTTTCCAACAGATTACAGGCATAGATACAACAGTATATTATAGCCCGACGATTTTCAAGAACGCTGGAATCACAGGAAACTCTAAGCTTCTTGCAGCAACTGTTGCTGTTGGATTCACCAAAACAGTGTTCATCTTGATAGCTATACTTCTAATCGACAAATTGGGGAGAAAGCCTTTGCTTTACGTGAGCACAATTGGAATGACAATAAGTTTATTTAGCCTGAGCTTCGCACTGGCCTTTCTGAGTCACGCAAAAGTTGGGATCGCGTTGGCGATTCTTGCTGTTTGTGGAAATGTAGCTTCTTTTTCAATAGGACTTGGTCCTATATGTTGGGTGCTGTCATCCGAAATATTTCCTTTGAGGCTTAGAGCGCAAGCATCGGCTCTTGGAGCAGTGGGAAGTAGGGTAAGCAGCGGTGCAATTTCCATGTCCTTTCTATCCGTCACCAAAGCAATAACAGTAGCCGGAACTTTCTTTGTTTTTGGTGTTATTTCGTGCAGCGCTGTTGCGTTTGTTCATTACTGTGTTCCTGAGACAAAAGGAAAGAGTTTGGAAGAAATTGAAGTGCTGTTTCAAAATGTAGGTGAATCACAAGAAAGTGAGGTAGAAATGGGAGATGTGGAGCATCTGATGCAGAAGTCATGA
Protein sequence

>Msa0272440

MGLVDVQENGNGNGDVISEIPLGTKNKYIRMTSEEEEEEEGLATRKHDSKKYIFACAVFASLNSVLLGYDVGVMSGAIIFIQEDLKITEVQQEVLVGILSIISLLGSLAGGKTSDWIGRKWTIGLAALIFQTGGAIMALAPSFKVLMIGRLIAGVGIGFGVMIAPVYIAEISPAIARGSLTSFPEIFINFGILLGYISNYAFSKLPSHINWRIMLGVGLIPSVVIAVALFIIPESPRWLVVQNRIEEAKLVLSKISESEKDAEEKLQEIQKAAGSGNADKYETKAVWKEILYPSPPVRRMLITGCGIQCFQQITGIDTTVYYSPTIFKNAGITGNSKLLAATVAVGFTKTVFILIAILLIDKLGRKPLLYVSTIGMTISLFSLSFALAFLSHAKVGIALAILAVCGNVASFSIGLGPICWVLSSEIFPLRLRAQASALGAVGSRVSSGAISMSFLSVTKAITVAGTFFVFGVISCSAVAFVHYCVPETKGKSLEEIEVLFQNVGESQESEVEMGDVEHLMQKS*