AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0428330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428330 MtrunA17_Chr3g0131711 99.458 922 5 0 1 922 1 922 0.0 1854
Msa0428330 MtrunA17_Chr8g0385811 90.281 926 86 2 1 922 1 926 0.0 1661
Msa0428330 MtrunA17_Chr3g0134631 90.076 927 87 3 1 922 1 927 0.0 1652
Msa0428330 MtrunA17_Chr3g0135231 72.431 613 133 7 1 604 1 586 0.0 842
Msa0428330 MtrunA17_Chr3g0135231 68.966 116 26 1 710 825 545 650 8.84e-39 154
Msa0428330 MtrunA17_Chr3g0102771 51.208 869 305 12 91 916 1 793 0.0 835
Msa0428330 MtrunA17_Chr3g0131351 47.126 870 409 14 91 916 100 962 0.0 763
Msa0428330 MtrunA17_Chr3g0137071 44.751 905 397 16 67 898 75 949 0.0 723
Msa0428330 MtrunA17_Chr7g0218421 44.773 880 387 14 93 898 86 940 0.0 720
Msa0428330 MtrunA17_Chr6g0454071 42.919 925 418 18 73 916 55 950 0.0 691
Msa0428330 MtrunA17_Chr4g0061371 41.961 877 420 15 93 902 4 858 0.0 650
Msa0428330 MtrunA17_Chr7g0225161 42.386 880 415 18 94 905 5 860 0.0 620
Msa0428330 MtrunA17_Chr2g0329561 41.818 330 175 3 577 905 143 456 1.38e-78 263
Msa0428330 MtrunA17_Chr2g0277781 44.257 296 147 4 577 870 2 281 2.92e-77 254
Msa0428330 MtrunA17_Chr1g0188061 74.797 123 28 1 124 243 20 142 4.33e-48 174
Msa0428330 MtrunA17_Chr1g0188061 65.891 129 33 2 665 793 232 349 5.77e-42 157
Msa0428330 MtrunA17_Chr1g0188061 48.913 92 17 1 410 501 153 214 3.01e-16 81.3
Msa0428330 MtrunA17_Chr7g0260931 50.000 84 42 0 574 657 11 94 1.47e-23 95.9
Msa0428330 MtrunA17_Chr2g0277771 31.373 153 88 3 754 905 1 137 5.47e-16 77.0
Msa0428330 MtrunA17_Chr5g0398561 28.571 161 105 4 68 220 56 214 3.00e-14 73.2
Msa0428330 MtrunA17_Chr4g0073021 28.743 167 108 3 592 757 658 814 2.64e-12 71.2
Msa0428330 MtrunA17_Chr6g0475931 31.496 127 85 1 94 218 89 215 2.06e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428330 AT5G50920.1 88.013 926 100 4 3 919 6 929 0.0 1589
Msa0428330 AT3G48870.2 85.779 879 125 0 33 911 25 903 0.0 1497
Msa0428330 AT3G48870.1 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0428330 AT3G48870.4 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0428330 AT3G48870.3 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0428330 AT5G51070.1 48.677 869 390 13 79 902 67 924 0.0 782
Msa0428330 AT5G15450.1 45.205 876 388 13 93 898 80 933 0.0 715
Msa0428330 AT2G25140.1 44.570 884 396 13 95 905 88 950 0.0 714
Msa0428330 AT1G74310.1 42.466 876 402 15 93 896 4 849 0.0 660
Msa0428330 AT1G74310.2 42.908 839 377 15 93 859 4 812 0.0 637
Msa0428330 AT4G14670.1 43.739 567 242 9 186 695 77 623 7.56e-143 438
Msa0428330 AT3G45450.1 61.370 365 94 7 91 453 1 320 1.66e-125 383
Msa0428330 AT4G30350.1 30.675 163 103 2 595 757 568 720 6.36e-12 70.1

Find 286 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACTGTATTCCTAGTTTA+TGG 0.129930 3_2:-79164948 Msa0428330:three_prime_UTR
TCTTGACATGAGTGAGTTTA+TGG 0.134853 3_2:-79166180 Msa0428330:CDS
CTTCCACTCGTGCATCTTTA+AGG 0.139989 3_2:+79170772 None:intergenic
TTCTGCTAGCTTGGTCAAAT+TGG 0.174429 3_2:+79169494 None:intergenic
TTCAAGTAACAGAAAGATTT+AGG 0.174960 3_2:-79165662 Msa0428330:CDS
TGGTGCGACGGCCTAAAATT+TGG 0.209026 3_2:+79169329 None:intergenic
CACACTGTCTCCAAACTTAT+TGG 0.210042 3_2:-79166152 Msa0428330:CDS
ATTTCAGGGCACAATTATAT+TGG 0.228980 3_2:-79169817 Msa0428330:intron
AGCAAATCAAGTTGAGAAAA+AGG 0.233807 3_2:-79165288 Msa0428330:three_prime_UTR
GGGAATCATGGCTCGGGTTT+TGG 0.234926 3_2:-79171213 Msa0428330:exon
CGCATGATGGCTCTTCTTAA+AGG 0.235677 3_2:+79165594 None:intergenic
AAGAGCCATCATGCGACTTT+TGG 0.245921 3_2:-79165586 Msa0428330:CDS
CAGATTCTACTGGGTCTTAT+TGG 0.247254 3_2:-79170843 Msa0428330:CDS
GATGAAGTGCACACACTAAT+TGG 0.268640 3_2:-79168701 Msa0428330:CDS
GTGGAAGTGGAGAAGATAAT+TGG 0.274857 3_2:-79170756 Msa0428330:CDS
ATCTTCATCCATGGCTATTT+CGG 0.281475 3_2:-79165170 Msa0428330:three_prime_UTR
CTCAAATTTCCCTGAATTTG+TGG 0.296159 3_2:+79165026 None:intergenic
AATAAATGCAGCCGGATATT+CGG 0.297717 3_2:-79171234 Msa0428330:intron
AACTTTCATACCAGTATATC+AGG 0.299224 3_2:-79168062 Msa0428330:intron
TGTATGACAACCACAAATTC+AGG 0.303508 3_2:-79165036 Msa0428330:three_prime_UTR
GTGATAAAGAAATGGATCTA+AGG 0.316162 3_2:-79166583 Msa0428330:CDS
GCATTGGCTGCCTACTACTT+TGG 0.322084 3_2:-79166224 Msa0428330:CDS
GTTGGTTCTGGTACTTTAAC+TGG 0.328169 3_2:+79168183 None:intergenic
GGATCAGAACACTTGCTTCT+AGG 0.330589 3_2:-79169796 Msa0428330:CDS
CGCTTTGCACGAGGAGTAAA+CGG 0.343489 3_2:+79170702 None:intergenic
GGTGCGACGGCCTAAAATTT+GGG 0.348667 3_2:+79169330 None:intergenic
GTAACAGTATGATGCTCTAT+TGG 0.349243 3_2:+79172139 None:intergenic
GCTCAGTCGATTAATGTTCC+TGG 0.349711 3_2:-79171191 Msa0428330:CDS
GGGATAGGGGAAAACCAAAA+AGG 0.350036 3_2:-79165243 Msa0428330:three_prime_UTR
CCGTTAGTCTTCCATCTTCA+AGG 0.351323 3_2:+79165994 None:intergenic
TGTACAGGGTTGCATGTCTT+AGG 0.356462 3_2:-79164980 Msa0428330:three_prime_UTR
TCAAGTAACAGAAAGATTTA+GGG 0.359184 3_2:-79165661 Msa0428330:CDS
ACACCAACTTTGGAGGAGTA+TGG 0.360599 3_2:-79169519 Msa0428330:CDS
AAGCTAGCAATTGGACGGTT+AGG 0.361474 3_2:+79166293 None:intergenic
ATAAATGCAGCCGGATATTC+GGG 0.362730 3_2:-79171233 Msa0428330:intron
ACTTCGTACTATCAATCATT+TGG 0.363357 3_2:-79171054 Msa0428330:CDS
TTAAATATTATGCAGTGTAT+TGG 0.363497 3_2:-79168273 Msa0428330:intron
GTTTCATCAACAGTTGGTTC+TGG 0.366287 3_2:+79168171 None:intergenic
TTTCAGGCAACTCACAAAAC+TGG 0.379537 3_2:-79165754 Msa0428330:CDS
GACATGCAACCCTGTACATT+GGG 0.380682 3_2:+79164985 None:intergenic
AGGAGGTGAACCAATAAGTT+TGG 0.381503 3_2:+79166142 None:intergenic
AATAAAATTGTGGTGGCAAA+TGG 0.381512 3_2:+79172047 None:intergenic
TGGAATCGTCTCTCCAAAGC+TGG 0.385694 3_2:+79168207 None:intergenic
CAAGGAGGTGCTTGTTGATA+AGG 0.385889 3_2:+79171943 None:intergenic
AGCAGCATCAATTGCACCTT+CGG 0.387475 3_2:+79168667 None:intergenic
AAGATAATTGGAAGAGGTAG+TGG 0.390234 3_2:-79170744 Msa0428330:CDS
CATTACCTCTTCTGCTAGCT+TGG 0.390626 3_2:+79169485 None:intergenic
TCGACAAGTAAAACATACTA+TGG 0.391976 3_2:+79165365 None:intergenic
GTTAACATTATAGGAATAAG+TGG 0.399890 3_2:-79165264 Msa0428330:three_prime_UTR
TCATGACAAACCTGATATAC+TGG 0.400165 3_2:+79168052 None:intergenic
AAGTCCTTTCAGTATTTGTA+TGG 0.403240 3_2:+79168149 None:intergenic
CCTTGTCTTATTGGAGAACC+TGG 0.409018 3_2:-79169298 Msa0428330:CDS
GAGAAAGGAGGTCGCCGAAT+TGG 0.410502 3_2:-79165897 Msa0428330:CDS
CTGCTAAGGGAAAACGTGAC+TGG 0.410535 3_2:+79165314 None:intergenic
AATCAAATCAATGGCTTTGT+CGG 0.411132 3_2:+79167348 None:intergenic
CTTGATTTGCTAGGCTGCTA+AGG 0.413276 3_2:+79165300 None:intergenic
ATGTTCCTGGTCTAGTGGTT+GGG 0.414455 3_2:-79171178 Msa0428330:CDS
ACTTTACACAAGCGAGTCAT+TGG 0.414627 3_2:-79166380 Msa0428330:CDS
AAACTTATTGGTTCACCTCC+TGG 0.414825 3_2:-79166140 Msa0428330:CDS
TCCATGGCTATTTCGGAAGT+TGG 0.416138 3_2:-79165163 Msa0428330:three_prime_UTR
ACCTGTCCCTCAGGGAAAGT+TGG 0.421323 3_2:-79169392 Msa0428330:intron
TTAAGAATGCCAGGTTTCTC+AGG 0.429731 3_2:-79171077 Msa0428330:CDS
GCAATACTATACAGCAATGC+TGG 0.430704 3_2:+79165098 None:intergenic
GAAGATTGTTAAAGAGAAAG+AGG 0.432645 3_2:-79167136 Msa0428330:CDS
TAACAATAAAACACCAACTT+TGG 0.433480 3_2:-79169529 Msa0428330:CDS
CAATTTCTACACGGCGGGCA+AGG 0.434847 3_2:-79170983 Msa0428330:CDS
AATGTTCCTGGTCTAGTGGT+TGG 0.435674 3_2:-79171179 Msa0428330:CDS
TCCTCGTGCAAAGCGTGTAT+TGG 0.436138 3_2:-79170694 Msa0428330:CDS
TTATAATAGAATCAAGAGTT+TGG 0.437499 3_2:-79165841 Msa0428330:CDS
AGCCATGATTCCCGAATATC+CGG 0.440884 3_2:+79171223 None:intergenic
GAAAAGATGAAGCTAGCAAT+TGG 0.446933 3_2:+79166284 None:intergenic
TGTGGCTGTCTTCCCACAAC+AGG 0.448929 3_2:+79169367 None:intergenic
GTCACCCTCTTTGATCTCTC+TGG 0.449102 3_2:+79165536 None:intergenic
ATTATAGGAATAAGTGGGAT+AGG 0.450568 3_2:-79165258 Msa0428330:three_prime_UTR
CTCGAGGAAGCTCGCCAACT+TGG 0.453993 3_2:-79170663 Msa0428330:intron
AGGTCTTCTTCGAGAGGGTG+AGG 0.455712 3_2:-79169776 Msa0428330:CDS
AGCTAGCAATTGGACGGTTA+GGG 0.456523 3_2:+79166294 None:intergenic
AGGAACTAAAACAATACTTC+AGG 0.457240 3_2:-79165812 Msa0428330:CDS
AGCCATGTTTGAGCGTTTCA+CGG 0.458933 3_2:-79170940 Msa0428330:CDS
TATTAGTAGGATCAGCGCCC+AGG 0.460369 3_2:+79169728 None:intergenic
GGTTCACCTCCTGGATATGT+TGG 0.462266 3_2:-79166131 Msa0428330:CDS
TGGAACAGAGCAGATTCTAC+TGG 0.466157 3_2:-79170853 Msa0428330:CDS
GTTCTGGTACTTTAACTGGC+TGG 0.466695 3_2:+79168187 None:intergenic
ATGTCAACTTCAGTCACAAT+AGG 0.466713 3_2:+79166488 None:intergenic
GCACAAGCAAAGTCAACATA+AGG 0.467412 3_2:-79171156 Msa0428330:CDS
TAACAGAAAGATTTAGGGAC+AGG 0.469450 3_2:-79165656 Msa0428330:CDS
AGCATCATGTTGAATACATC+AGG 0.469700 3_2:+79166023 None:intergenic
TCCCATAGACTTTAAAACCT+TGG 0.470278 3_2:+79170800 None:intergenic
AGTTCGCCTCTTGCAAGAGC+TGG 0.472521 3_2:+79168632 None:intergenic
AGCCCGTGTTCTTGAAAACC+TGG 0.474778 3_2:-79169746 Msa0428330:CDS
AGAACTACGTGATAAAGAAA+TGG 0.474958 3_2:-79166591 Msa0428330:CDS
TAAATACCGTGGTGAGTTTG+AGG 0.476180 3_2:-79168783 Msa0428330:CDS
TGTTACTGCTACTGTTGGCT+CGG 0.477023 3_2:-79169559 Msa0428330:CDS
ATCAAATCAATGGCTTTGTC+GGG 0.478982 3_2:+79167349 None:intergenic
AGAGGGTGACTCCGTAATAG+TGG 0.479834 3_2:-79165523 Msa0428330:CDS
TTATAGGAATAAGTGGGATA+GGG 0.480320 3_2:-79165257 Msa0428330:three_prime_UTR
TTCAACATATCGTGTCCTCC+TGG 0.480428 3_2:-79166466 Msa0428330:CDS
CAAGAGGAGGCAAGGCGTCT+TGG 0.480892 3_2:-79170888 Msa0428330:CDS
CTTATAATGACGTCAAATGT+TGG 0.481358 3_2:-79165933 Msa0428330:CDS
TCTGCTGAGACTTTATCAAC+AGG 0.481392 3_2:+79166434 None:intergenic
TCTTGCAAGAGGCGAACTAC+AGG 0.482034 3_2:-79168627 Msa0428330:intron
TCAAAGAGTACAACAGTGTA+AGG 0.482911 3_2:+79166065 None:intergenic
AAATAGCAGACATAATGCTC+AGG 0.485233 3_2:-79165722 Msa0428330:CDS
ACTCATGTCAAGACGAATCA+TGG 0.485591 3_2:+79166190 None:intergenic
CTTGCTCAGCGGATTGCAAA+TGG 0.488742 3_2:-79169247 Msa0428330:CDS
GTAGTAGGCAGCCAATGCTT+TGG 0.489027 3_2:+79166229 None:intergenic
GGAATCAACATCCACTATTA+CGG 0.489265 3_2:+79165512 None:intergenic
AGCTTCATCAATCAAATCAA+TGG 0.489376 3_2:+79167339 None:intergenic
GATGGCTCTTCTTAAAGGCC+TGG 0.492279 3_2:+79165599 None:intergenic
CAAAGTCAACATAAGGGATC+GGG 0.495246 3_2:-79171149 Msa0428330:CDS
CATTATATAGCAAGAGCCTC+TGG 0.496204 3_2:+79165438 None:intergenic
GTCTGAATTGGCCAAAGCAT+TGG 0.497656 3_2:-79166240 Msa0428330:CDS
TAAAGATGCACGAGTGGAAG+TGG 0.498088 3_2:-79170769 Msa0428330:CDS
AATCAAGATCGAATCCAATT+CGG 0.500880 3_2:+79165883 None:intergenic
AAGAACTTGACAAGGAGGTC+AGG 0.505480 3_2:-79167158 Msa0428330:CDS
GTCGGGCTATCCGTCGAGCA+CGG 0.505534 3_2:-79166331 Msa0428330:CDS
GTTCCATACTCCTCCAAAGT+TGG 0.506275 3_2:+79169516 None:intergenic
GATCTGTATATGACATGCCT+TGG 0.506705 3_2:-79165201 Msa0428330:three_prime_UTR
TATAGGAATAAGTGGGATAG+GGG 0.511778 3_2:-79165256 Msa0428330:three_prime_UTR
TTATTGGAGAACCTGGTGTT+GGG 0.513026 3_2:-79169291 Msa0428330:CDS
TGTTCTTGAAATCCACAGTT+CGG 0.514426 3_2:+79165961 None:intergenic
ATCTGATCGCCTCCTCAAGA+TGG 0.514627 3_2:-79166408 Msa0428330:CDS
AGTGATAATGTTAGCTCAAG+AGG 0.516301 3_2:-79170904 Msa0428330:CDS
CATAGACTTTAAAACCTTGG+CGG 0.516915 3_2:+79170803 None:intergenic
TGCTAAGGGAAAACGTGACT+GGG 0.517165 3_2:+79165315 None:intergenic
GGTCTTATTGGTGAAGGCAC+TGG 0.517438 3_2:-79170831 Msa0428330:CDS
GGATCTAAGGGCGCAGATCT+CGG 0.519911 3_2:-79166570 Msa0428330:CDS
ACCTGTGTGCGAATATTAGT+AGG 0.519972 3_2:+79169715 None:intergenic
GAAGGTTATAATCCTAGCTA+TGG 0.520470 3_2:-79165624 Msa0428330:CDS
GTGGAGAAGATAATTGGAAG+AGG 0.520750 3_2:-79170750 Msa0428330:CDS
ATTGATTTGATTGATGAAGC+TGG 0.522141 3_2:-79167337 Msa0428330:CDS
CATATCGTGTCCTCCTGGAC+GGG 0.524485 3_2:-79166461 Msa0428330:CDS
GTTACTGCTACTGTTGGCTC+GGG 0.524509 3_2:-79169558 Msa0428330:CDS
AGCCGGATATTCGGGAATCA+TGG 0.524642 3_2:-79171225 Msa0428330:exon
CCACAACATTGGATGAATAC+AGG 0.528109 3_2:-79168248 Msa0428330:CDS
CAATAAAACACCAACTTTGG+AGG 0.528552 3_2:-79169526 Msa0428330:CDS
ATCTCGGCACTTGTAGAGAA+AGG 0.528902 3_2:-79166554 Msa0428330:CDS
AAAGGCCTGGCTCCATAGCT+AGG 0.530755 3_2:+79165612 None:intergenic
TCGCAACCAAGACTTTGAAA+AGG 0.532814 3_2:-79167106 Msa0428330:intron
TCGGGCTATCCGTCGAGCAC+GGG 0.533907 3_2:-79166330 Msa0428330:CDS
AATTTCTACACGGCGGGCAA+GGG 0.534704 3_2:-79170982 Msa0428330:CDS
GCAAAGTCAACATAAGGGAT+CGG 0.534948 3_2:-79171150 Msa0428330:CDS
ACAAGTGGATTAAGAATGCC+AGG 0.535409 3_2:-79171086 Msa0428330:CDS
TATATGATATAATATGATAG+AGG 0.535447 3_2:+79172006 None:intergenic
ATGCTTCAGATCCTTGAAGA+TGG 0.536989 3_2:-79166005 Msa0428330:CDS
TGTTGATAAGGAAGAAGAAG+AGG 0.537341 3_2:+79171955 None:intergenic
ATCAACAGGAATGCCCGTCC+AGG 0.537924 3_2:+79166448 None:intergenic
GGGAAAGTTGGATCCTGTTG+TGG 0.537999 3_2:-79169380 Msa0428330:CDS
CTTATTGGAGAACCTGGTGT+TGG 0.538020 3_2:-79169292 Msa0428330:CDS
GCATACATACATCATAGAAA+AGG 0.538074 3_2:+79165409 None:intergenic
TCGACGGATAGCCCGACTAA+TGG 0.538900 3_2:+79166337 None:intergenic
AGACATGCAACCCTGTACAT+TGG 0.539114 3_2:+79164984 None:intergenic
AATCCGCTGAGCAAGACCTT+CGG 0.539342 3_2:+79169255 None:intergenic
GTAAAGTATCTTCCATCTTG+AGG 0.539384 3_2:+79166396 None:intergenic
AATGGCAATTTCTACACGGC+GGG 0.539827 3_2:-79170988 Msa0428330:CDS
GTATACTTATTCCATAAACT+AGG 0.542797 3_2:+79164937 None:intergenic
GACAATGTTACTGCTACTGT+TGG 0.543582 3_2:-79169564 Msa0428330:CDS
TTCTTCAGAGCCAAAGTAGT+AGG 0.543624 3_2:+79166214 None:intergenic
ACACAAGCGAGTCATTGGTC+AGG 0.544730 3_2:-79166375 Msa0428330:CDS
GGAAAGTTGGATCCTGTTGT+GGG 0.544780 3_2:-79169379 Msa0428330:CDS
GATATTCGGGAATCATGGCT+CGG 0.544931 3_2:-79171220 Msa0428330:exon
GACATGGGTCTGCTTGTAGC+CGG 0.545246 3_2:-79168809 Msa0428330:CDS
TGATAAAGAAATGGATCTAA+GGG 0.546297 3_2:-79166582 Msa0428330:CDS
GGAAGCAGTGTGATTGAGAA+AGG 0.546826 3_2:-79165912 Msa0428330:CDS
GACATGTTCATCTTCATCCA+TGG 0.547277 3_2:-79165179 Msa0428330:three_prime_UTR
TGGTGTGGGGAAGTCTGAAT+TGG 0.547498 3_2:-79166252 Msa0428330:CDS
TGGGTGACACGTTCAATTTG+TGG 0.548358 3_2:+79169349 None:intergenic
TTTGACCAAGCTAGCAGAAG+AGG 0.549540 3_2:-79169490 Msa0428330:intron
GATGAGCAAAGCAGAGAGTG+AGG 0.551014 3_2:-79166525 Msa0428330:CDS
GGAGAGGTTGAAGAAACTGA+TGG 0.552688 3_2:-79168762 Msa0428330:CDS
ATAATCCTAGCTATGGAGCC+AGG 0.554444 3_2:-79165617 Msa0428330:CDS
AGAGGAAGGAAAGAAGAGAA+AGG 0.555610 3_2:+79172024 None:intergenic
TTGATTTGCTAGGCTGCTAA+GGG 0.556012 3_2:+79165301 None:intergenic
CTTCTAGGTCTTCTTCGAGA+GGG 0.556040 3_2:-79169781 Msa0428330:CDS
CTCCGTGAAACGCTCAAACA+TGG 0.556050 3_2:+79170938 None:intergenic
TGTATGGTTTCATCAACAGT+TGG 0.556173 3_2:+79168165 None:intergenic
TGATATAATATGATAGAGGA+AGG 0.556562 3_2:+79172010 None:intergenic
AAGAGAAAGGAATAAAATTG+TGG 0.556888 3_2:+79172037 None:intergenic
GGTAATGTGATTGTTCTCAA+TGG 0.559015 3_2:-79165486 Msa0428330:CDS
ACATATCGTGTCCTCCTGGA+CGG 0.559052 3_2:-79166462 Msa0428330:CDS
ATATTCGGGAATCATGGCTC+GGG 0.559088 3_2:-79171219 Msa0428330:exon
GTATGACAACCACAAATTCA+GGG 0.559140 3_2:-79165035 Msa0428330:three_prime_UTR
TCAGTGTAACCAACATATCC+AGG 0.559254 3_2:+79166122 None:intergenic
AGCAGTAGAAGCCATTAGTC+GGG 0.561845 3_2:-79166348 Msa0428330:CDS
AAACGCTCAAACATGGCTCT+AGG 0.562302 3_2:+79170945 None:intergenic
GCTATCCGTCGAGCACGGGT+TGG 0.562819 3_2:-79166326 Msa0428330:CDS
TTAACAAATGCATACCAAGT+TGG 0.563326 3_2:+79170649 None:intergenic
ATTGCTGTCTTCCCAACACC+AGG 0.565153 3_2:+79169280 None:intergenic
TTTCTGGTCCAACTGGTGTG+GGG 0.566734 3_2:-79166265 Msa0428330:CDS
CTACTGGGTCTTATTGGTGA+AGG 0.566897 3_2:-79170837 Msa0428330:CDS
CACAAGCAAAGTCAACATAA+GGG 0.569649 3_2:-79171155 Msa0428330:CDS
AAGCAGTAGAAGCCATTAGT+CGG 0.571735 3_2:-79166349 Msa0428330:CDS
TTGGATACTATGCTGAAACC+TGG 0.572166 3_2:-79171035 Msa0428330:CDS
GCTTCTAGGTCTTCTTCGAG+AGG 0.573108 3_2:-79169782 Msa0428330:CDS
GTGCACACACTAATTGGAGC+AGG 0.573347 3_2:-79168695 Msa0428330:CDS
ATCCTCCAAAAGTCGCATGA+TGG 0.573693 3_2:+79165581 None:intergenic
CAATACTATACAGCAATGCT+GGG 0.574156 3_2:+79165099 None:intergenic
TCAATCCAACCCGTGCTCGA+CGG 0.575359 3_2:+79166321 None:intergenic
GTGGTTTCAGTTGCCAGAAG+AGG 0.575911 3_2:-79167184 Msa0428330:intron
GGAACAGAGCAGATTCTACT+GGG 0.576295 3_2:-79170852 Msa0428330:CDS
GATTAATGTTCCTGGTCTAG+TGG 0.577290 3_2:-79171183 Msa0428330:CDS
CTCACCACGGTATTTAGTAC+CGG 0.577721 3_2:+79168790 None:intergenic
TGGATACTATGCTGAAACCT+GGG 0.580597 3_2:-79171034 Msa0428330:CDS
GGTCTTCTTCGAGAGGGTGA+GGG 0.581676 3_2:-79169775 Msa0428330:CDS
GGAATCGTCTCTCCAAAGCT+GGG 0.583453 3_2:+79168208 None:intergenic
ATTGCTGTATAGTATTGCTA+TGG 0.587333 3_2:-79165093 Msa0428330:three_prime_UTR
CATGTTGAATACATCAGGAT+GGG 0.591274 3_2:+79166028 None:intergenic
TTTGCGTGAAAATCTAGCCC+AGG 0.591359 3_2:+79171017 None:intergenic
CCTGTATTCATCCAATGTTG+TGG 0.592061 3_2:+79168248 None:intergenic
TAATGACTCTTGAGTACCGC+TGG 0.592462 3_2:+79165461 None:intergenic
GAGAGTGAGGCAGCAGACGA+AGG 0.592704 3_2:-79166512 Msa0428330:CDS
TCAGACTTCCCCACACCAGT+TGG 0.593013 3_2:+79166257 None:intergenic
TCCAACTTCCGAAATAGCCA+TGG 0.593814 3_2:+79165162 None:intergenic
ACTCACAAAACTGGAGGTGA+AGG 0.595629 3_2:-79165745 Msa0428330:CDS
GGAAGACTAACGGACAGTAA+AGG 0.596129 3_2:-79165984 Msa0428330:CDS
CTAAAACCAGCTCTTGCAAG+AGG 0.596964 3_2:-79168638 Msa0428330:CDS
TCATGTTGAATACATCAGGA+TGG 0.597747 3_2:+79166027 None:intergenic
ATGTGTGCTCTGCGAACAAG+TGG 0.598939 3_2:-79171101 Msa0428330:CDS
CTAGGTTATAACCCTCGACA+TGG 0.599033 3_2:-79168825 Msa0428330:intron
GCATAGGTTATTCGCATGGT+GGG 0.603210 3_2:-79169597 Msa0428330:intron
TTAACATTATAGGAATAAGT+GGG 0.603681 3_2:-79165263 Msa0428330:three_prime_UTR
TGTTAGCTCAAGAGGAGGCA+AGG 0.606725 3_2:-79170896 Msa0428330:CDS
TCCAATACACGCTTTGCACG+AGG 0.610074 3_2:+79170693 None:intergenic
GCCCGTGTTCTTGAAAACCT+GGG 0.611740 3_2:-79169745 Msa0428330:CDS
TTGTGCCCAACCACTAGACC+AGG 0.614357 3_2:+79171173 None:intergenic
AGTCCGTCTTCAACATGCAC+AGG 0.614688 3_2:-79167308 Msa0428330:intron
AGAAAGGAATAAAATTGTGG+TGG 0.615729 3_2:+79172040 None:intergenic
GAGGCTCTTGCTATATAATG+TGG 0.617034 3_2:-79165435 Msa0428330:exon
CAACCTTAAAGATGCACGAG+TGG 0.617077 3_2:-79170775 Msa0428330:CDS
AATCAAGAGTTTGGTGACTG+AGG 0.617951 3_2:-79165832 Msa0428330:CDS
ATACCTGTGCATGTTGAAGA+CGG 0.618584 3_2:+79167305 None:intergenic
TACAAGCAGACCCATGTCGA+GGG 0.618958 3_2:+79168814 None:intergenic
AGATGAAGCTAGCAATTGGA+CGG 0.619132 3_2:+79166288 None:intergenic
GTACGAAGTCCTGAGAAACC+TGG 0.621017 3_2:+79171068 None:intergenic
GAAACCATACAAATACTGAA+AGG 0.623251 3_2:-79168153 Msa0428330:CDS
GGATATGTTGGTTACACTGA+AGG 0.624514 3_2:-79166119 Msa0428330:CDS
CCTTGAAGATGGAAGACTAA+CGG 0.625200 3_2:-79165994 Msa0428330:CDS
AGGGACAGGGTGGTTGACGA+AGG 0.629060 3_2:-79165642 Msa0428330:CDS
AGGCACTGGTATCGCCGCCA+AGG 0.629421 3_2:-79170817 Msa0428330:CDS
AGGAGTAAACGGAATTTCAA+CGG 0.631678 3_2:+79170713 None:intergenic
CCAGGTTCTCCAATAAGACA+AGG 0.631883 3_2:+79169298 None:intergenic
CAGGCAACTCACAAAACTGG+AGG 0.631958 3_2:-79165751 Msa0428330:CDS
CTCGCCAGAGAGATCAAAGA+GGG 0.633919 3_2:-79165540 Msa0428330:CDS
AATAGCAGACATAATGCTCA+GGG 0.636079 3_2:-79165721 Msa0428330:CDS
AACAGAAAGATTTAGGGACA+GGG 0.637304 3_2:-79165655 Msa0428330:CDS
TGTATTGGAACTTTCACTCG+AGG 0.638433 3_2:-79170679 Msa0428330:CDS
ACATGCAACCCTGTACATTG+GGG 0.638905 3_2:+79164986 None:intergenic
GGCATAGGTTATTCGCATGG+TGG 0.639012 3_2:-79169598 Msa0428330:intron
GGGAAGACAGCAATTGCCGA+AGG 0.642178 3_2:-79169271 Msa0428330:CDS
CATCAGTATATCGAAGCTTG+TGG 0.642564 3_2:+79168106 None:intergenic
CTACAAGCAGACCCATGTCG+AGG 0.645704 3_2:+79168813 None:intergenic
ACCGTGGTGAGTTTGAGGAG+AGG 0.647205 3_2:-79168778 Msa0428330:CDS
TATCAACAAGCACCTCCTTG+AGG 0.647285 3_2:-79171940 Msa0428330:intron
ATGGGCATAGGTTATTCGCA+TGG 0.648542 3_2:-79169601 Msa0428330:intron
ATTGGAGCAGGAGCAGCCGA+AGG 0.651442 3_2:-79168683 Msa0428330:CDS
TTGCCGAAGGTCTTGCTCAG+CGG 0.652500 3_2:-79169258 Msa0428330:CDS
GATGAAGATGAACATGTCCA+AGG 0.652848 3_2:+79165184 None:intergenic
AGAGGCAAAAGAACTTGACA+AGG 0.654303 3_2:-79167166 Msa0428330:CDS
GAGAACAATCACATTACCGT+CGG 0.654311 3_2:+79165491 None:intergenic
TACTCAAGAGTCATTACCAG+AGG 0.656366 3_2:-79165454 Msa0428330:CDS
ACATGAGTGAGTTTATGGAA+AGG 0.657196 3_2:-79166175 Msa0428330:CDS
ACCTCTCCTCAAACTCACCA+CGG 0.657923 3_2:+79168777 None:intergenic
GTGTATTGGAGCCACAACAT+TGG 0.658810 3_2:-79168259 Msa0428330:CDS
AACAGGAATGCCCGTCCAGG+AGG 0.663322 3_2:+79166451 None:intergenic
AAGTATCTTCCATCTTGAGG+AGG 0.666939 3_2:+79166399 None:intergenic
GATAATGTTAGCTCAAGAGG+AGG 0.667530 3_2:-79170901 Msa0428330:CDS
GGCAAAAGAACTTGACAAGG+AGG 0.667719 3_2:-79167163 Msa0428330:CDS
TCCTACTAATATTCGCACAC+AGG 0.671963 3_2:-79169716 Msa0428330:intron
GGACAGTAAAGGCCGAACTG+TGG 0.672843 3_2:-79165973 Msa0428330:CDS
TGATGTACCTGAAACAATCG+AGG 0.674849 3_2:-79169224 Msa0428330:CDS
TAGGTTATAACCCTCGACAT+GGG 0.677434 3_2:-79168824 Msa0428330:CDS
GCTCGCCAGAGAGATCAAAG+AGG 0.680368 3_2:-79165541 Msa0428330:CDS
AGAAAGATTTAGGGACAGGG+TGG 0.680970 3_2:-79165652 Msa0428330:CDS
GGCACTTGTAGAGAAAGGCA+AGG 0.681351 3_2:-79166549 Msa0428330:CDS
ATTGTTCTCAATGGTACCAG+CGG 0.682456 3_2:-79165477 Msa0428330:CDS
AGCAGTGTGATTGAGAAAGG+AGG 0.683862 3_2:-79165909 Msa0428330:CDS
TATCAATGGCAATTTCTACA+CGG 0.687547 3_2:-79170992 Msa0428330:CDS
CATGCAACCCTGTACATTGG+GGG 0.701712 3_2:+79164987 None:intergenic
ATAGTGGATGTTGATTCCGA+CGG 0.707457 3_2:-79165507 Msa0428330:CDS
GATGTACCTGAAACAATCGA+GGG 0.717844 3_2:-79169223 Msa0428330:CDS
AGCAGACATAATGCTCAGGG+AGG 0.724565 3_2:-79165718 Msa0428330:CDS
CAATGGCAATTTCTACACGG+CGG 0.726789 3_2:-79170989 Msa0428330:CDS
TATGTTGGTTACACTGAAGG+TGG 0.729330 3_2:-79166116 Msa0428330:CDS
GTAGCCGGTACTAAATACCG+TGG 0.745190 3_2:-79168794 Msa0428330:CDS
GTGTAACCAACATATCCAGG+AGG 0.759460 3_2:+79166125 None:intergenic
TAGTAATAGATACCTCAAGG+AGG 0.774995 3_2:+79171928 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATCAATTATAAGATA+AGG + chr3_2:79165422-79165441 None:intergenic 10.0%
!!! GTTTTTTATTTCTTATAAAA+AGG - chr3_2:79167075-79167094 Msa0428330:intron 10.0%
!! AATTAATATAAACATTAATG+TGG + chr3_2:79167409-79167428 None:intergenic 10.0%
!!! TAATTCTTATTAATTTGATA+TGG + chr3_2:79168651-79168670 None:intergenic 10.0%
!!! AGTTTTTTATTTTTTTAAAC+AGG - chr3_2:79169811-79169830 Msa0428330:CDS 10.0%
!! TATATGATATAATATGATAG+AGG + chr3_2:79165065-79165084 None:intergenic 15.0%
!!! TTGATTAAAAGAATGTTTTA+AGG - chr3_2:79165432-79165451 Msa0428330:exon 15.0%
!!! TGATTAAAAGAATGTTTTAA+GGG - chr3_2:79165433-79165452 Msa0428330:exon 15.0%
!! CCTAAATTAATTAAGATTTA+AGG + chr3_2:79165482-79165501 None:intergenic 15.0%
!! CCTTAAATCTTAATTAATTT+AGG - chr3_2:79165479-79165498 Msa0428330:CDS 15.0%
!!! TTTTTGTTCTTATTTTTGAT+TGG - chr3_2:79166509-79166528 Msa0428330:CDS 15.0%
!! ATAAATCTCACAATAAAATA+CGG + chr3_2:79166946-79166965 None:intergenic 15.0%
!!! TTATTTCTTATAAAAAGGAA+CGG - chr3_2:79167080-79167099 Msa0428330:intron 15.0%
!!! AGCATTTTATAAGAATATAT+TGG + chr3_2:79168210-79168229 None:intergenic 15.0%
!! CATAAGTATCAAATTAATAT+TGG - chr3_2:79168682-79168701 Msa0428330:CDS 15.0%
!! TAATTTAAAAATTAAAGTGG+TGG - chr3_2:79168712-79168731 Msa0428330:CDS 15.0%
!! ACTAAAGTCATATAAATATA+TGG - chr3_2:79169576-79169595 Msa0428330:CDS 15.0%
!! ATATAAATATATGGATTTCT+GGG - chr3_2:79169585-79169604 Msa0428330:CDS 15.0%
!!! TCTTATCTGTTTTTTTTCTT+TGG - chr3_2:79165212-79165231 Msa0428330:three_prime_UTR 20.0%
!!! TTTTTTTTTCTTCTTTCTGT+TGG - chr3_2:79165308-79165327 Msa0428330:three_prime_UTR 20.0%
!! TTTAGATGAAAGAATGATTA+AGG - chr3_2:79165337-79165356 Msa0428330:three_prime_UTR 20.0%
!!! GATTAAAAGAATGTTTTAAG+GGG - chr3_2:79165434-79165453 Msa0428330:exon 20.0%
!!! TTTGTTTTGTTAAACTATGT+AGG - chr3_2:79165582-79165601 Msa0428330:CDS 20.0%
!!! AAATTTATCTATTTTACGTG+AGG - chr3_2:79166623-79166642 Msa0428330:intron 20.0%
!!! TATGTTTTGATTTCATTAAG+AGG - chr3_2:79166661-79166680 Msa0428330:intron 20.0%
!! TAAATCTCACAATAAAATAC+GGG + chr3_2:79166945-79166964 None:intergenic 20.0%
!! TTGTATTAAAAAAATTGAGC+CGG - chr3_2:79167125-79167144 Msa0428330:CDS 20.0%
!!! TCATATTCAATTGTAAGTTT+TGG - chr3_2:79167196-79167215 Msa0428330:intron 20.0%
!! TGGTAAAAATAGATAAATGA+AGG + chr3_2:79167389-79167408 None:intergenic 20.0%
!!! AATAAGACAAGGATTATTTT+TGG + chr3_2:79167762-79167781 None:intergenic 20.0%
!! AAAAATAATCCTTGTCTTAT+TGG - chr3_2:79167761-79167780 Msa0428330:intron 20.0%
!! TATTAGAAAAATGATGTTGT+CGG - chr3_2:79168072-79168091 Msa0428330:CDS 20.0%
!!! CAAATAACAATTTAAGCTTT+TGG + chr3_2:79168156-79168175 None:intergenic 20.0%
!!! AAGCTTAAATTGTTATTTGA+AGG - chr3_2:79168157-79168176 Msa0428330:CDS 20.0%
!!! TTTCCTCAAAGTATTTAAAA+TGG - chr3_2:79168470-79168489 Msa0428330:intron 20.0%
!!! AATCCATTTTAAATACTTTG+AGG + chr3_2:79168476-79168495 None:intergenic 20.0%
!! TTAAATATTATGCAGTGTAT+TGG - chr3_2:79168795-79168814 Msa0428330:CDS 20.0%
!!! AAATACAGATACTCTAAAAT+TGG - chr3_2:79169211-79169230 Msa0428330:intron 20.0%
!! TTGAATATATTGTATTAACG+AGG - chr3_2:79169444-79169463 Msa0428330:intron 20.0%
!! TGTTTCATGTTAATGTATTT+AGG - chr3_2:79169507-79169526 Msa0428330:CDS 20.0%
!! CATATAAATATATGGATTTC+TGG - chr3_2:79169584-79169603 Msa0428330:CDS 20.0%
!! TATAAATATATGGATTTCTG+GGG - chr3_2:79169586-79169605 Msa0428330:CDS 20.0%
!! ATAAAAAACTGCTAGTTAAA+GGG + chr3_2:79169801-79169820 None:intergenic 20.0%
!! AATAAAAAACTGCTAGTTAA+AGG + chr3_2:79169802-79169821 None:intergenic 20.0%
!! ATTGAACTATAAAACTTTAC+AGG + chr3_2:79170012-79170031 None:intergenic 20.0%
!! TTATAATAGAATCAAGAGTT+TGG - chr3_2:79171227-79171246 Msa0428330:intron 20.0%
!!! TCTTTTAATTTATCACTGAT+AGG - chr3_2:79171730-79171749 Msa0428330:intron 20.0%
!! TTAACATTATAGGAATAAGT+GGG - chr3_2:79171805-79171824 Msa0428330:intron 20.0%
! AAGAGAAAGGAATAAAATTG+TGG + chr3_2:79165034-79165053 None:intergenic 25.0%
! TGATATAATATGATAGAGGA+AGG + chr3_2:79165061-79165080 None:intergenic 25.0%
! ATATAGTAATAGATACCTCA+AGG + chr3_2:79165146-79165165 None:intergenic 25.0%
!!! TATCTGTTTTTTTTCTTTGG+TGG - chr3_2:79165215-79165234 Msa0428330:three_prime_UTR 25.0%
! TATGTATTCTATTGCTTCAA+GGG - chr3_2:79165783-79165802 Msa0428330:CDS 25.0%
!!! GTTTTATTAATAAATGCAGC+CGG - chr3_2:79165826-79165845 Msa0428330:CDS 25.0%
! AATTGGGTAGTAATGTATAA+TGG + chr3_2:79166452-79166471 None:intergenic 25.0%
! TTACTACCCAATTTATTAGT+TGG - chr3_2:79166459-79166478 Msa0428330:CDS 25.0%
! CTTTCTCCAACTAATAAATT+GGG + chr3_2:79166468-79166487 None:intergenic 25.0%
! TAATTCAAGCAACAAATTAC+AGG + chr3_2:79166570-79166589 None:intergenic 25.0%
! AAAGGAATTCTAGCAATTAA+TGG + chr3_2:79166918-79166937 None:intergenic 25.0%
! CAATAAAATACGGGTATAAA+AGG + chr3_2:79166936-79166955 None:intergenic 25.0%
!!! TGATTATTACGTGTTATTTG+TGG - chr3_2:79167000-79167019 Msa0428330:intron 25.0%
! TCTTACACCATAAAAATTTC+AGG - chr3_2:79167236-79167255 Msa0428330:intron 25.0%
! CTTACACCATAAAAATTTCA+GGG - chr3_2:79167237-79167256 Msa0428330:intron 25.0%
! CATTAATCTGATCATTTCTT+TGG - chr3_2:79167443-79167462 Msa0428330:intron 25.0%
! TAACAATAAAACACCAACTT+TGG - chr3_2:79167539-79167558 Msa0428330:intron 25.0%
! ATATTCTATATTTGAGTAGC+TGG - chr3_2:79167966-79167985 Msa0428330:intron 25.0%
!!! TATGATTGGTTTTTAGTTGT+TGG - chr3_2:79168549-79168568 Msa0428330:intron 25.0%
!! ACAAGTACATCAATTTTCAA+TGG + chr3_2:79169130-79169149 None:intergenic 25.0%
! TGAAAATTGATGTACTTGTT+TGG - chr3_2:79169131-79169150 Msa0428330:intron 25.0%
! TATATTGTATTAACGAGGAA+TGG - chr3_2:79169449-79169468 Msa0428330:intron 25.0%
! ACCTCTATTATTTAGCTAAT+TGG - chr3_2:79169853-79169872 Msa0428330:intron 25.0%
! CCTCTATTATTTAGCTAATT+GGG - chr3_2:79169854-79169873 Msa0428330:intron 25.0%
!! TAATTTTTATACACTCTCAG+TGG + chr3_2:79170178-79170197 None:intergenic 25.0%
! AATGTTTGATGCTAAAACAT+AGG + chr3_2:79170204-79170223 None:intergenic 25.0%
!! TTTTAGCATCAAACATTTTC+AGG - chr3_2:79170207-79170226 Msa0428330:intron 25.0%
! AACATTATCTAATTGGAGAA+AGG + chr3_2:79170247-79170266 None:intergenic 25.0%
! AGACAACAACATTATCTAAT+TGG + chr3_2:79170254-79170273 None:intergenic 25.0%
! ATGAAAAATAATACTTGTGC+TGG - chr3_2:79170274-79170293 Msa0428330:intron 25.0%
!! ATTGCCTGAAATTTTATAGT+TGG - chr3_2:79170313-79170332 Msa0428330:intron 25.0%
!! TTAGTCAATAATTTGTGACT+TGG - chr3_2:79170427-79170446 Msa0428330:intron 25.0%
! TGATAAAGAAATGGATCTAA+GGG - chr3_2:79170486-79170505 Msa0428330:intron 25.0%
! TTCAAGTAACAGAAAGATTT+AGG - chr3_2:79171406-79171425 Msa0428330:intron 25.0%
! TCAAGTAACAGAAAGATTTA+GGG - chr3_2:79171407-79171426 Msa0428330:intron 25.0%
! GTTAACATTATAGGAATAAG+TGG - chr3_2:79171804-79171823 Msa0428330:intron 25.0%
! GTATACTTATTCCATAAACT+AGG + chr3_2:79172134-79172153 None:intergenic 25.0%
AATAAAATTGTGGTGGCAAA+TGG + chr3_2:79165024-79165043 None:intergenic 30.0%
AGAAAGGAATAAAATTGTGG+TGG + chr3_2:79165031-79165050 None:intergenic 30.0%
GTAAACGAATAATTAGGAGA+TGG + chr3_2:79165660-79165679 None:intergenic 30.0%
CTCCTAATTATTCGTTTACA+TGG - chr3_2:79165661-79165680 Msa0428330:CDS 30.0%
GACCATGTAAACGAATAATT+AGG + chr3_2:79165666-79165685 None:intergenic 30.0%
ATTTCCTGAAATCATGAACA+TGG - chr3_2:79165710-79165729 Msa0428330:CDS 30.0%
GTATGTATTCTATTGCTTCA+AGG - chr3_2:79165782-79165801 Msa0428330:CDS 30.0%
GCTTCAAGGGTAATAATTAT+TGG - chr3_2:79165796-79165815 Msa0428330:CDS 30.0%
ACTTCGTACTATCAATCATT+TGG - chr3_2:79166014-79166033 Msa0428330:CDS 30.0%
TATCAATGGCAATTTCTACA+CGG - chr3_2:79166076-79166095 Msa0428330:CDS 30.0%
TTAACAAATGCATACCAAGT+TGG + chr3_2:79166422-79166441 None:intergenic 30.0%
GCTTTCTCCAACTAATAAAT+TGG + chr3_2:79166469-79166488 None:intergenic 30.0%
!! AGCATTTTGATCTTTAACAG+TGG - chr3_2:79166486-79166505 Msa0428330:CDS 30.0%
AATTACAGGACAAAAAACTG+CGG + chr3_2:79166556-79166575 None:intergenic 30.0%
! TGTTGCTTGAATTAAGATAG+AGG - chr3_2:79166576-79166595 Msa0428330:CDS 30.0%
!!! GAATTAAGATAGAGGTGTTT+TGG - chr3_2:79166584-79166603 Msa0428330:CDS 30.0%
!!! GTTTTGATTTCATTAAGAGG+AGG - chr3_2:79166664-79166683 Msa0428330:intron 30.0%
GGGATAAACAAACTATCATA+TGG + chr3_2:79166775-79166794 None:intergenic 30.0%
CCAAATAGATAGTACTCTTT+CGG - chr3_2:79166850-79166869 Msa0428330:intron 30.0%
CAAATAGATAGTACTCTTTC+GGG - chr3_2:79166851-79166870 Msa0428330:intron 30.0%
CTGTGTTTCTTATCGTTATT+AGG + chr3_2:79166887-79166906 None:intergenic 30.0%
!! ATTCTAGCAATTAATGGACT+TGG + chr3_2:79166912-79166931 None:intergenic 30.0%
ATTAAATGCATCCACTATGT+GGG + chr3_2:79166981-79167000 None:intergenic 30.0%
!! GACAAAGGAAAAGCATTTAA+AGG + chr3_2:79167044-79167063 None:intergenic 30.0%
! TTTCCTTTGTCTTGATGATT+TGG - chr3_2:79167053-79167072 Msa0428330:intron 30.0%
AAACCAAATCATCAAGACAA+AGG + chr3_2:79167059-79167078 None:intergenic 30.0%
TATTAAAAAAATTGAGCCGG+AGG - chr3_2:79167128-79167147 Msa0428330:CDS 30.0%
! ATTGTGCCCTGAAATTTTTA+TGG + chr3_2:79167246-79167265 None:intergenic 30.0%
ATTTCAGGGCACAATTATAT+TGG - chr3_2:79167251-79167270 Msa0428330:intron 30.0%
! ATCTGATCATTTCTTTGGAA+TGG - chr3_2:79167448-79167467 Msa0428330:intron 30.0%
!! TCTGATCATTTCTTTGGAAT+GGG - chr3_2:79167449-79167468 Msa0428330:intron 30.0%
AGAATAACAGATCATCTGAA+TGG + chr3_2:79167926-79167945 None:intergenic 30.0%
! TGGAAGAGTTGATTATATCA+TGG + chr3_2:79168136-79168155 None:intergenic 30.0%
CATATAAACTTTATGACCAG+AGG + chr3_2:79168622-79168641 None:intergenic 30.0%
GAAACCATACAAATACTGAA+AGG - chr3_2:79168915-79168934 Msa0428330:intron 30.0%
AAGTCCTTTCAGTATTTGTA+TGG + chr3_2:79168922-79168941 None:intergenic 30.0%
AACTTTCATACCAGTATATC+AGG - chr3_2:79169006-79169025 Msa0428330:intron 30.0%
TAATGTCAAGATATTCACAG+AGG + chr3_2:79169175-79169194 None:intergenic 30.0%
!! TTAGTACTGGCATTTACATT+CGG - chr3_2:79169266-79169285 Msa0428330:CDS 30.0%
TCAAGTTATCGTAGTTTAGA+TGG + chr3_2:79169327-79169346 None:intergenic 30.0%
AAACTATGTAGCAATATCTC+TGG - chr3_2:79169373-79169392 Msa0428330:CDS 30.0%
CTTTAGTACAGTATGCATAT+GGG + chr3_2:79169563-79169582 None:intergenic 30.0%
ACTTTAGTACAGTATGCATA+TGG + chr3_2:79169564-79169583 None:intergenic 30.0%
GCTCATTTCAAAATTATTCC+TGG - chr3_2:79169657-79169676 Msa0428330:intron 30.0%
!! AATCAAATCAATGGCTTTGT+CGG + chr3_2:79169723-79169742 None:intergenic 30.0%
AGCTTCATCAATCAAATCAA+TGG + chr3_2:79169732-79169751 None:intergenic 30.0%
!! ATTGATTTGATTGATGAAGC+TGG - chr3_2:79169731-79169750 Msa0428330:CDS 30.0%
CCCAATTAGCTAAATAATAG+AGG + chr3_2:79169857-79169876 None:intergenic 30.0%
GAAGATTGTTAAAGAGAAAG+AGG - chr3_2:79169932-79169951 Msa0428330:intron 30.0%
! AAGTTACCTTTTCAAAGTCT+TGG + chr3_2:79169971-79169990 None:intergenic 30.0%
GTTCAATTTATATACGCTCT+CGG - chr3_2:79170025-79170044 Msa0428330:intron 30.0%
TAGGCCAACTATAAAATTTC+AGG + chr3_2:79170320-79170339 None:intergenic 30.0%
TGACACATGAATTTCTGAAT+AGG - chr3_2:79170450-79170469 Msa0428330:intron 30.0%
AGAACTACGTGATAAAGAAA+TGG - chr3_2:79170477-79170496 Msa0428330:intron 30.0%
GTGATAAAGAAATGGATCTA+AGG - chr3_2:79170485-79170504 Msa0428330:intron 30.0%
CTTATAATGACGTCAAATGT+TGG - chr3_2:79171135-79171154 Msa0428330:CDS 30.0%
AATCAAGATCGAATCCAATT+CGG + chr3_2:79171188-79171207 None:intergenic 30.0%
AGGAACTAAAACAATACTTC+AGG - chr3_2:79171256-79171275 Msa0428330:intron 30.0%
TCCAACCTATTTAAAAACTC+TGG + chr3_2:79171282-79171301 None:intergenic 30.0%
! TGGATGAAATGATTGTTTTC+AGG - chr3_2:79171298-79171317 Msa0428330:intron 30.0%
GCATACATACATCATAGAAA+AGG + chr3_2:79171662-79171681 None:intergenic 30.0%
TCGACAAGTAAAACATACTA+TGG + chr3_2:79171706-79171725 None:intergenic 30.0%
!!! TTTTCTCAACTTGATTTGCT+AGG + chr3_2:79171780-79171799 None:intergenic 30.0%
!! AGCAAATCAAGTTGAGAAAA+AGG - chr3_2:79171780-79171799 Msa0428330:intron 30.0%
!! GCAAATCAAGTTGAGAAAAA+GGG - chr3_2:79171781-79171800 Msa0428330:intron 30.0%
!! CAAATCAAGTTGAGAAAAAG+GGG - chr3_2:79171782-79171801 Msa0428330:intron 30.0%
GAAAAAGGGGTTAACATTAT+AGG - chr3_2:79171795-79171814 Msa0428330:intron 30.0%
ATTATAGGAATAAGTGGGAT+AGG - chr3_2:79171810-79171829 Msa0428330:intron 30.0%
TTATAGGAATAAGTGGGATA+GGG - chr3_2:79171811-79171830 Msa0428330:intron 30.0%
ATTGCTGTATAGTATTGCTA+TGG - chr3_2:79171975-79171994 Msa0428330:intron 30.0%
GTAACAGTATGATGCTCTAT+TGG + chr3_2:79164932-79164951 None:intergenic 35.0%
! TGTTGATAAGGAAGAAGAAG+AGG + chr3_2:79165116-79165135 None:intergenic 35.0%
TAGTAATAGATACCTCAAGG+AGG + chr3_2:79165143-79165162 None:intergenic 35.0%
TGAACTTCTATATAGCTGCT+TGG - chr3_2:79165522-79165541 Msa0428330:CDS 35.0%
GAACTTCTATATAGCTGCTT+GGG - chr3_2:79165523-79165542 Msa0428330:CDS 35.0%
AATAAATGCAGCCGGATATT+CGG - chr3_2:79165834-79165853 Msa0428330:CDS 35.0%
CACAAGCAAAGTCAACATAA+GGG - chr3_2:79165913-79165932 Msa0428330:CDS 35.0%
!!! TTTTCACGCAAAGGTATCAA+TGG - chr3_2:79166062-79166081 Msa0428330:CDS 35.0%
! AGTGATAATGTTAGCTCAAG+AGG - chr3_2:79166164-79166183 Msa0428330:CDS 35.0%
!! CATAGACTTTAAAACCTTGG+CGG + chr3_2:79166268-79166287 None:intergenic 35.0%
!!! GCCAAGGTTTTAAAGTCTAT+GGG - chr3_2:79166267-79166286 Msa0428330:CDS 35.0%
!! TCCCATAGACTTTAAAACCT+TGG + chr3_2:79166271-79166290 None:intergenic 35.0%
AAGATAATTGGAAGAGGTAG+TGG - chr3_2:79166324-79166343 Msa0428330:CDS 35.0%
AGGAGTAAACGGAATTTCAA+CGG + chr3_2:79166358-79166377 None:intergenic 35.0%
TGGGTAGTAATGTATAATGG+AGG + chr3_2:79166449-79166468 None:intergenic 35.0%
ATTACAGGACAAAAAACTGC+GGG + chr3_2:79166555-79166574 None:intergenic 35.0%
!!! TGTTTTGGTTATGCAATGCT+TGG - chr3_2:79166599-79166618 Msa0428330:CDS 35.0%
! ATCTATTTTACGTGAGGAGA+TGG - chr3_2:79166629-79166648 Msa0428330:intron 35.0%
! TCTATTTTACGTGAGGAGAT+GGG - chr3_2:79166630-79166649 Msa0428330:intron 35.0%
TATTCTCTACGCTTTCACTT+AGG + chr3_2:79166694-79166713 None:intergenic 35.0%
! TCACTTGGATAGAAGTACAA+GGG + chr3_2:79166795-79166814 None:intergenic 35.0%
! ATCACTTGGATAGAAGTACA+AGG + chr3_2:79166796-79166815 None:intergenic 35.0%
!! CCGAAAGAGTACTATCTATT+TGG + chr3_2:79166853-79166872 None:intergenic 35.0%
!!! GTACTCTTTCGGGTTTTTTT+AGG - chr3_2:79166861-79166880 Msa0428330:intron 35.0%
CATTAAATGCATCCACTATG+TGG + chr3_2:79166982-79167001 None:intergenic 35.0%
GAAAAAAAACAGATAGCCTC+CGG + chr3_2:79167147-79167166 None:intergenic 35.0%
!!! GGCTATCTGTTTTTTTTCAG+TGG - chr3_2:79167149-79167168 Msa0428330:CDS 35.0%
!!! ATCTGTTTTTTTTCAGTGGC+TGG - chr3_2:79167153-79167172 Msa0428330:CDS 35.0%
CAATAAAACACCAACTTTGG+AGG - chr3_2:79167542-79167561 Msa0428330:intron 35.0%
CATCGTTCATGAAGAAAACT+AGG + chr3_2:79167615-79167634 None:intergenic 35.0%
!! CTAGTTTTCTTCATGAACGA+TGG - chr3_2:79167613-79167632 Msa0428330:intron 35.0%
!!! AAGGATTATTTTTGGTGCGA+CGG + chr3_2:79167754-79167773 None:intergenic 35.0%
!!! TTTTTTCCCTCGATTGTTTC+AGG + chr3_2:79167854-79167873 None:intergenic 35.0%
TGAAACAATCGAGGGAAAAA+AGG - chr3_2:79167853-79167872 Msa0428330:intron 35.0%
TCCTTTATTAAGAGCCCTTT+AGG - chr3_2:79167993-79168012 Msa0428330:intron 35.0%
! ATGCTTTGTTCACATGAACT+AGG - chr3_2:79168225-79168244 Msa0428330:CDS 35.0%
AACCAATCATATCATTCTCC+CGG + chr3_2:79168540-79168559 None:intergenic 35.0%
!!! GTGAACTTTTTCATGGGAAA+AGG - chr3_2:79168590-79168609 Msa0428330:intron 35.0%
TGTATGGTTTCATCAACAGT+TGG + chr3_2:79168906-79168925 None:intergenic 35.0%
TCATGACAAACCTGATATAC+TGG + chr3_2:79169019-79169038 None:intergenic 35.0%
! ATCTTGCATGTCATTTATGC+TGG - chr3_2:79169062-79169081 Msa0428330:intron 35.0%
!! TAGTACTGGCATTTACATTC+GGG - chr3_2:79169267-79169286 Msa0428330:CDS 35.0%
ATGCATGTGTCAAGAGAAAT+TGG + chr3_2:79169475-79169494 None:intergenic 35.0%
AGCAAACATTATTATACGCC+AGG + chr3_2:79169678-79169697 None:intergenic 35.0%
!! ATCAAATCAATGGCTTTGTC+GGG + chr3_2:79169722-79169741 None:intergenic 35.0%
TAGCTAATTGGGCTATAATG+TGG - chr3_2:79169865-79169884 Msa0428330:intron 35.0%
AAACATTGCACGTTTGAATC+AGG + chr3_2:79170408-79170427 None:intergenic 35.0%
ACATGAATTTCTGAATAGGC+TGG - chr3_2:79170454-79170473 Msa0428330:intron 35.0%
ATGTCAACTTCAGTCACAAT+AGG + chr3_2:79170583-79170602 None:intergenic 35.0%
! GTAAAGTATCTTCCATCTTG+AGG + chr3_2:79170675-79170694 None:intergenic 35.0%
GAAAAGATGAAGCTAGCAAT+TGG + chr3_2:79170787-79170806 None:intergenic 35.0%
!! ATTGCTAGCTTCATCTTTTC+TGG - chr3_2:79170787-79170806 Msa0428330:CDS 35.0%
TCTTGACATGAGTGAGTTTA+TGG - chr3_2:79170888-79170907 Msa0428330:CDS 35.0%
ACATGAGTGAGTTTATGGAA+AGG - chr3_2:79170893-79170912 Msa0428330:CDS 35.0%
! TCAAAGAGTACAACAGTGTA+AGG + chr3_2:79171006-79171025 None:intergenic 35.0%
CATGTTGAATACATCAGGAT+GGG + chr3_2:79171043-79171062 None:intergenic 35.0%
TCATGTTGAATACATCAGGA+TGG + chr3_2:79171044-79171063 None:intergenic 35.0%
AGCATCATGTTGAATACATC+AGG + chr3_2:79171048-79171067 None:intergenic 35.0%
TGTTCTTGAAATCCACAGTT+CGG + chr3_2:79171110-79171129 None:intergenic 35.0%
! TCAGGCCAGAGTTTTTAAAT+AGG - chr3_2:79171274-79171293 Msa0428330:intron 35.0%
! GCCAGAGTTTTTAAATAGGT+TGG - chr3_2:79171278-79171297 Msa0428330:intron 35.0%
AAATAGCAGACATAATGCTC+AGG - chr3_2:79171346-79171365 Msa0428330:intron 35.0%
AATAGCAGACATAATGCTCA+GGG - chr3_2:79171347-79171366 Msa0428330:intron 35.0%
TAACAGAAAGATTTAGGGAC+AGG - chr3_2:79171412-79171431 Msa0428330:intron 35.0%
AACAGAAAGATTTAGGGACA+GGG - chr3_2:79171413-79171432 Msa0428330:intron 35.0%
GAAGGTTATAATCCTAGCTA+TGG - chr3_2:79171444-79171463 Msa0428330:intron 35.0%
GGAATCAACATCCACTATTA+CGG + chr3_2:79171559-79171578 None:intergenic 35.0%
GGTAATGTGATTGTTCTCAA+TGG - chr3_2:79171582-79171601 Msa0428330:intron 35.0%
TATAGGAATAAGTGGGATAG+GGG - chr3_2:79171812-79171831 Msa0428330:intron 35.0%
ATCTTCATCCATGGCTATTT+CGG - chr3_2:79171898-79171917 Msa0428330:intron 35.0%
CAATACTATACAGCAATGCT+GGG + chr3_2:79171972-79171991 None:intergenic 35.0%
TGTATGACAACCACAAATTC+AGG - chr3_2:79172032-79172051 Msa0428330:five_prime_UTR 35.0%
GTATGACAACCACAAATTCA+GGG - chr3_2:79172033-79172052 Msa0428330:five_prime_UTR 35.0%
CTCAAATTTCCCTGAATTTG+TGG + chr3_2:79172045-79172064 None:intergenic 35.0%
CAGACTGTATTCCTAGTTTA+TGG - chr3_2:79172120-79172139 Msa0428330:five_prime_UTR 35.0%
AGAGGAAGGAAAGAAGAGAA+AGG + chr3_2:79165047-79165066 None:intergenic 40.0%
TGTAGGTACTATGCTGTCTT+TGG - chr3_2:79165599-79165618 Msa0428330:CDS 40.0%
AGCACCATGTTCATGATTTC+AGG + chr3_2:79165717-79165736 None:intergenic 40.0%
TGAAATCATGAACATGGTGC+TGG - chr3_2:79165716-79165735 Msa0428330:CDS 40.0%
ATAAATGCAGCCGGATATTC+GGG - chr3_2:79165835-79165854 Msa0428330:CDS 40.0%
GATTAATGTTCCTGGTCTAG+TGG - chr3_2:79165885-79165904 Msa0428330:CDS 40.0%
GCACAAGCAAAGTCAACATA+AGG - chr3_2:79165912-79165931 Msa0428330:CDS 40.0%
GCAAAGTCAACATAAGGGAT+CGG - chr3_2:79165918-79165937 Msa0428330:CDS 40.0%
CAAAGTCAACATAAGGGATC+GGG - chr3_2:79165919-79165938 Msa0428330:CDS 40.0%
!! ACAAGTGGATTAAGAATGCC+AGG - chr3_2:79165982-79166001 Msa0428330:CDS 40.0%
TTAAGAATGCCAGGTTTCTC+AGG - chr3_2:79165991-79166010 Msa0428330:CDS 40.0%
TTGGATACTATGCTGAAACC+TGG - chr3_2:79166033-79166052 Msa0428330:CDS 40.0%
TGGATACTATGCTGAAACCT+GGG - chr3_2:79166034-79166053 Msa0428330:CDS 40.0%
GATAATGTTAGCTCAAGAGG+AGG - chr3_2:79166167-79166186 Msa0428330:CDS 40.0%
! CGTCTTGGTCACAATTTTGT+TGG - chr3_2:79166195-79166214 Msa0428330:CDS 40.0%
! CAGATTCTACTGGGTCTTAT+TGG - chr3_2:79166225-79166244 Msa0428330:CDS 40.0%
!!! CGCCAAGGTTTTAAAGTCTA+TGG - chr3_2:79166266-79166285 Msa0428330:CDS 40.0%
GTGGAAGTGGAGAAGATAAT+TGG - chr3_2:79166312-79166331 Msa0428330:CDS 40.0%
GTGGAGAAGATAATTGGAAG+AGG - chr3_2:79166318-79166337 Msa0428330:CDS 40.0%
TGTATTGGAACTTTCACTCG+AGG - chr3_2:79166389-79166408 Msa0428330:CDS 40.0%
! CTATTTTACGTGAGGAGATG+GGG - chr3_2:79166631-79166650 Msa0428330:intron 40.0%
GAGTACTATCTATTTGGTCG+TGG + chr3_2:79166847-79166866 None:intergenic 40.0%
CTAACTAGAAACCCACATAG+TGG - chr3_2:79166967-79166986 Msa0428330:intron 40.0%
TCCTACTAATATTCGCACAC+AGG - chr3_2:79167352-79167371 Msa0428330:CDS 40.0%
ACCTGTGTGCGAATATTAGT+AGG + chr3_2:79167356-79167375 None:intergenic 40.0%
!! CATTTCTTTGGAATGGGCAT+AGG - chr3_2:79167455-79167474 Msa0428330:intron 40.0%
GACAATGTTACTGCTACTGT+TGG - chr3_2:79167504-79167523 Msa0428330:intron 40.0%
! TTCTGCTAGCTTGGTCAAAT+TGG + chr3_2:79167577-79167596 None:intergenic 40.0%
! GTTTTCTTCATGAACGATGG+TGG - chr3_2:79167616-79167635 Msa0428330:intron 40.0%
! GAACGTGTCACCCAAATTTT+AGG - chr3_2:79167728-79167747 Msa0428330:intron 40.0%
TTATTGGAGAACCTGGTGTT+GGG - chr3_2:79167777-79167796 Msa0428330:intron 40.0%
TGATGTACCTGAAACAATCG+AGG - chr3_2:79167844-79167863 Msa0428330:intron 40.0%
GATGTACCTGAAACAATCGA+GGG - chr3_2:79167845-79167864 Msa0428330:intron 40.0%
GCCTAAAGGGCTCTTAATAA+AGG + chr3_2:79167997-79168016 None:intergenic 40.0%
TTATTAAGAGCCCTTTAGGC+TGG - chr3_2:79167997-79168016 Msa0428330:intron 40.0%
TAATGCACTTCCAGCCTAAA+GGG + chr3_2:79168010-79168029 None:intergenic 40.0%
TTAATGCACTTCCAGCCTAA+AGG + chr3_2:79168011-79168030 None:intergenic 40.0%
TAGGTTATAACCCTCGACAT+GGG - chr3_2:79168244-79168263 Msa0428330:CDS 40.0%
TAAATACCGTGGTGAGTTTG+AGG - chr3_2:79168285-79168304 Msa0428330:intron 40.0%
GATGAAGTGCACACACTAAT+TGG - chr3_2:79168367-79168386 Msa0428330:intron 40.0%
GATATAGGACAATGGCATCA+AGG + chr3_2:79168518-79168537 None:intergenic 40.0%
TGATGCCATTGTCCTATATC+CGG - chr3_2:79168518-79168537 Msa0428330:intron 40.0%
CATATCATTCTCCCGGATAT+AGG + chr3_2:79168533-79168552 None:intergenic 40.0%
ATCCGGGAGAATGATATGAT+TGG - chr3_2:79168535-79168554 Msa0428330:intron 40.0%
!!! ACCACTCGTGAACTTTTTCA+TGG - chr3_2:79168583-79168602 Msa0428330:intron 40.0%
!!! CCACTCGTGAACTTTTTCAT+GGG - chr3_2:79168584-79168603 Msa0428330:intron 40.0%
CCTGTATTCATCCAATGTTG+TGG + chr3_2:79168823-79168842 None:intergenic 40.0%
CCACAACATTGGATGAATAC+AGG - chr3_2:79168820-79168839 Msa0428330:CDS 40.0%
!! GTTGGTTCTGGTACTTTAAC+TGG + chr3_2:79168888-79168907 None:intergenic 40.0%
! GTTTCATCAACAGTTGGTTC+TGG + chr3_2:79168900-79168919 None:intergenic 40.0%
CATCAGTATATCGAAGCTTG+TGG + chr3_2:79168965-79168984 None:intergenic 40.0%
GTGTATTGCAGTCTTAGTAC+TGG - chr3_2:79169253-79169272 Msa0428330:CDS 40.0%
!! AGTACTGGCATTTACATTCG+GGG - chr3_2:79169268-79169287 Msa0428330:CDS 40.0%
GATGGTTAAACTGCTAGATG+AGG + chr3_2:79169309-79169328 None:intergenic 40.0%
ATACCTGTGCATGTTGAAGA+CGG + chr3_2:79169766-79169785 None:intergenic 40.0%
! TCAAGTTCTTTTGCCTCTTC+TGG + chr3_2:79169900-79169919 None:intergenic 40.0%
! TCGCAACCAAGACTTTGAAA+AGG - chr3_2:79169962-79169981 Msa0428330:intron 40.0%
! TGACTTGCCATGCTCATTAA+TGG - chr3_2:79170114-79170133 Msa0428330:intron 40.0%
GTTGACACCATTAATGAGCA+TGG + chr3_2:79170124-79170143 None:intergenic 40.0%
CTAGATGCAGAGATCATTCT+AGG + chr3_2:79170339-79170358 None:intergenic 40.0%
TGAATCAGGAACAGACAACT+GGG + chr3_2:79170394-79170413 None:intergenic 40.0%
TTGAATCAGGAACAGACAAC+TGG + chr3_2:79170395-79170414 None:intergenic 40.0%
TCTGCTGAGACTTTATCAAC+AGG + chr3_2:79170637-79170656 None:intergenic 40.0%
AAGTATCTTCCATCTTGAGG+AGG + chr3_2:79170672-79170691 None:intergenic 40.0%
ACTTTACACAAGCGAGTCAT+TGG - chr3_2:79170688-79170707 Msa0428330:CDS 40.0%
AAGCAGTAGAAGCCATTAGT+CGG - chr3_2:79170719-79170738 Msa0428330:CDS 40.0%
AGATGAAGCTAGCAATTGGA+CGG + chr3_2:79170783-79170802 None:intergenic 40.0%
!! TTCATCTTTTCTGGTCCAAC+TGG - chr3_2:79170796-79170815 Msa0428330:CDS 40.0%
TTCTTCAGAGCCAAAGTAGT+AGG + chr3_2:79170857-79170876 None:intergenic 40.0%
ACTCATGTCAAGACGAATCA+TGG + chr3_2:79170881-79170900 None:intergenic 40.0%
CACACTGTCTCCAAACTTAT+TGG - chr3_2:79170916-79170935 Msa0428330:CDS 40.0%
AGGAGGTGAACCAATAAGTT+TGG + chr3_2:79170929-79170948 None:intergenic 40.0%
!! AAACTTATTGGTTCACCTCC+TGG - chr3_2:79170928-79170947 Msa0428330:CDS 40.0%
TCAGTGTAACCAACATATCC+AGG + chr3_2:79170949-79170968 None:intergenic 40.0%
! GGATATGTTGGTTACACTGA+AGG - chr3_2:79170949-79170968 Msa0428330:CDS 40.0%
! TATGTTGGTTACACTGAAGG+TGG - chr3_2:79170952-79170971 Msa0428330:CDS 40.0%
ATGCTTCAGATCCTTGAAGA+TGG - chr3_2:79171063-79171082 Msa0428330:CDS 40.0%
CCTTGAAGATGGAAGACTAA+CGG - chr3_2:79171074-79171093 Msa0428330:CDS 40.0%
! AATCAAGAGTTTGGTGACTG+AGG - chr3_2:79171236-79171255 Msa0428330:intron 40.0%
TTTCAGGCAACTCACAAAAC+TGG - chr3_2:79171314-79171333 Msa0428330:intron 40.0%
!! ATAGTGGATGTTGATTCCGA+CGG - chr3_2:79171561-79171580 Msa0428330:intron 40.0%
GAGAACAATCACATTACCGT+CGG + chr3_2:79171580-79171599 None:intergenic 40.0%
ATTGTTCTCAATGGTACCAG+CGG - chr3_2:79171591-79171610 Msa0428330:intron 40.0%
TACTCAAGAGTCATTACCAG+AGG - chr3_2:79171614-79171633 Msa0428330:intron 40.0%
CATTATATAGCAAGAGCCTC+TGG + chr3_2:79171633-79171652 None:intergenic 40.0%
! GAGGCTCTTGCTATATAATG+TGG - chr3_2:79171633-79171652 Msa0428330:intron 40.0%
!! TTGATTTGCTAGGCTGCTAA+GGG + chr3_2:79171770-79171789 None:intergenic 40.0%
GGATAGGGGAAAACCAAAAA+GGG - chr3_2:79171826-79171845 Msa0428330:intron 40.0%
GATCTGTATATGACATGCCT+TGG - chr3_2:79171867-79171886 Msa0428330:intron 40.0%
GATGAAGATGAACATGTCCA+AGG + chr3_2:79171887-79171906 None:intergenic 40.0%
GACATGTTCATCTTCATCCA+TGG - chr3_2:79171889-79171908 Msa0428330:intron 40.0%
GCAATACTATACAGCAATGC+TGG + chr3_2:79171973-79171992 None:intergenic 40.0%
!! CAAGGAGGTGCTTGTTGATA+AGG + chr3_2:79165128-79165147 None:intergenic 45.0%
TATCAACAAGCACCTCCTTG+AGG - chr3_2:79165128-79165147 Msa0428330:three_prime_UTR 45.0%
!! TGAACATGGTGCTGGTTATG+AGG - chr3_2:79165724-79165743 Msa0428330:CDS 45.0%
AGCCATGATTCCCGAATATC+CGG + chr3_2:79165848-79165867 None:intergenic 45.0%
GATATTCGGGAATCATGGCT+CGG - chr3_2:79165848-79165867 Msa0428330:CDS 45.0%
ATATTCGGGAATCATGGCTC+GGG - chr3_2:79165849-79165868 Msa0428330:CDS 45.0%
GCTCAGTCGATTAATGTTCC+TGG - chr3_2:79165877-79165896 Msa0428330:CDS 45.0%
AATGTTCCTGGTCTAGTGGT+TGG - chr3_2:79165889-79165908 Msa0428330:CDS 45.0%
ATGTTCCTGGTCTAGTGGTT+GGG - chr3_2:79165890-79165909 Msa0428330:CDS 45.0%
TTTGCGTGAAAATCTAGCCC+AGG + chr3_2:79166054-79166073 None:intergenic 45.0%
!! TGGGCTAGATTTTCACGCAA+AGG - chr3_2:79166053-79166072 Msa0428330:CDS 45.0%
CAATGGCAATTTCTACACGG+CGG - chr3_2:79166079-79166098 Msa0428330:CDS 45.0%
AATGGCAATTTCTACACGGC+GGG - chr3_2:79166080-79166099 Msa0428330:CDS 45.0%
AAACGCTCAAACATGGCTCT+AGG + chr3_2:79166126-79166145 None:intergenic 45.0%
AGCCATGTTTGAGCGTTTCA+CGG - chr3_2:79166128-79166147 Msa0428330:CDS 45.0%
TGGAACAGAGCAGATTCTAC+TGG - chr3_2:79166215-79166234 Msa0428330:CDS 45.0%
GGAACAGAGCAGATTCTACT+GGG - chr3_2:79166216-79166235 Msa0428330:CDS 45.0%
!! CTACTGGGTCTTATTGGTGA+AGG - chr3_2:79166231-79166250 Msa0428330:CDS 45.0%
CAACCTTAAAGATGCACGAG+TGG - chr3_2:79166293-79166312 Msa0428330:CDS 45.0%
CTTCCACTCGTGCATCTTTA+AGG + chr3_2:79166299-79166318 None:intergenic 45.0%
TAAAGATGCACGAGTGGAAG+TGG - chr3_2:79166299-79166318 Msa0428330:CDS 45.0%
ACACCATGTATTACGGGGTT+TGG + chr3_2:79166823-79166842 None:intergenic 45.0%
TCGTGGCACACCATGTATTA+CGG + chr3_2:79166830-79166849 None:intergenic 45.0%
!! TTCAGTGGCTGGTTTGTCTT+AGG - chr3_2:79167164-79167183 Msa0428330:CDS 45.0%
!! TCAGTGGCTGGTTTGTCTTA+GGG - chr3_2:79167165-79167184 Msa0428330:CDS 45.0%
GGATCAGAACACTTGCTTCT+AGG - chr3_2:79167272-79167291 Msa0428330:intron 45.0%
CTTCTAGGTCTTCTTCGAGA+GGG - chr3_2:79167287-79167306 Msa0428330:intron 45.0%
ATGGGCATAGGTTATTCGCA+TGG - chr3_2:79167467-79167486 Msa0428330:intron 45.0%
GCATAGGTTATTCGCATGGT+GGG - chr3_2:79167471-79167490 Msa0428330:intron 45.0%
! TGTTACTGCTACTGTTGGCT+CGG - chr3_2:79167509-79167528 Msa0428330:intron 45.0%
! ACACCAACTTTGGAGGAGTA+TGG - chr3_2:79167549-79167568 Msa0428330:intron 45.0%
GTTCCATACTCCTCCAAAGT+TGG + chr3_2:79167555-79167574 None:intergenic 45.0%
TTTGACCAAGCTAGCAGAAG+AGG - chr3_2:79167578-79167597 Msa0428330:intron 45.0%
CATTACCTCTTCTGCTAGCT+TGG + chr3_2:79167586-79167605 None:intergenic 45.0%
!! GAACGATGGTGGATGATACT+AGG - chr3_2:79167627-79167646 Msa0428330:intron 45.0%
GGAAAGTTGGATCCTGTTGT+GGG - chr3_2:79167689-79167708 Msa0428330:intron 45.0%
TGGGTGACACGTTCAATTTG+TGG + chr3_2:79167722-79167741 None:intergenic 45.0%
CCAGGTTCTCCAATAAGACA+AGG + chr3_2:79167773-79167792 None:intergenic 45.0%
! CCTTGTCTTATTGGAGAACC+TGG - chr3_2:79167770-79167789 Msa0428330:intron 45.0%
CTTATTGGAGAACCTGGTGT+TGG - chr3_2:79167776-79167795 Msa0428330:intron 45.0%
GGATCAATGTCCTCACAAGT+TGG - chr3_2:79168093-79168112 Msa0428330:CDS 45.0%
! ATGTCCTCACAAGTTGGCAA+AGG - chr3_2:79168099-79168118 Msa0428330:CDS 45.0%
CTAGGTTATAACCCTCGACA+TGG - chr3_2:79168243-79168262 Msa0428330:CDS 45.0%
CTCACCACGGTATTTAGTAC+CGG + chr3_2:79168281-79168300 None:intergenic 45.0%
GGAGAGGTTGAAGAAACTGA+TGG - chr3_2:79168306-79168325 Msa0428330:intron 45.0%
AGCAGCATCAATTGCACCTT+CGG + chr3_2:79168404-79168423 None:intergenic 45.0%
CTAAAACCAGCTCTTGCAAG+AGG - chr3_2:79168430-79168449 Msa0428330:intron 45.0%
GATGCCATTGTCCTATATCC+GGG - chr3_2:79168519-79168538 Msa0428330:intron 45.0%
TTCTCCCGGATATAGGACAA+TGG + chr3_2:79168526-79168545 None:intergenic 45.0%
CCCATGAAAAAGTTCACGAG+TGG + chr3_2:79168587-79168606 None:intergenic 45.0%
AAAGTGGTGGCATTTCCTAC+TGG - chr3_2:79168725-79168744 Msa0428330:CDS 45.0%
GTGTATTGGAGCCACAACAT+TGG - chr3_2:79168809-79168828 Msa0428330:CDS 45.0%
CATCGAAAAAGACCCAGCTT+TGG - chr3_2:79168848-79168867 Msa0428330:intron 45.0%
GTTCTGGTACTTTAACTGGC+TGG + chr3_2:79168884-79168903 None:intergenic 45.0%
CTGCAATACACACACAACAC+TGG + chr3_2:79169244-79169263 None:intergenic 45.0%
TGGCATTTACATTCGGGGTA+TGG - chr3_2:79169273-79169292 Msa0428330:CDS 45.0%
GGCAAAAATCGATCACTGCA+GGG + chr3_2:79169701-79169720 None:intergenic 45.0%
GAATCAGGAACAGACAACTG+GGG + chr3_2:79170393-79170412 None:intergenic 45.0%
ATCTCGGCACTTGTAGAGAA+AGG - chr3_2:79170514-79170533 Msa0428330:intron 45.0%
TTCAACATATCGTGTCCTCC+TGG - chr3_2:79170602-79170621 Msa0428330:intron 45.0%
AGCAGTAGAAGCCATTAGTC+GGG - chr3_2:79170720-79170739 Msa0428330:CDS 45.0%
AGCTAGCAATTGGACGGTTA+GGG + chr3_2:79170777-79170796 None:intergenic 45.0%
AAGCTAGCAATTGGACGGTT+AGG + chr3_2:79170778-79170797 None:intergenic 45.0%
!! TTTTCTGGTCCAACTGGTGT+GGG - chr3_2:79170802-79170821 Msa0428330:CDS 45.0%
GTCTGAATTGGCCAAAGCAT+TGG - chr3_2:79170828-79170847 Msa0428330:CDS 45.0%
GTGTAACCAACATATCCAGG+AGG + chr3_2:79170946-79170965 None:intergenic 45.0%
!! CCGTTAGTCTTCCATCTTCA+AGG + chr3_2:79171077-79171096 None:intergenic 45.0%
! GGAAGACTAACGGACAGTAA+AGG - chr3_2:79171084-79171103 Msa0428330:CDS 45.0%
GGAAGCAGTGTGATTGAGAA+AGG - chr3_2:79171156-79171175 Msa0428330:CDS 45.0%
AGCAGTGTGATTGAGAAAGG+AGG - chr3_2:79171159-79171178 Msa0428330:CDS 45.0%
ACTCACAAAACTGGAGGTGA+AGG - chr3_2:79171323-79171342 Msa0428330:intron 45.0%
AGAAAGATTTAGGGACAGGG+TGG - chr3_2:79171416-79171435 Msa0428330:intron 45.0%
ATAATCCTAGCTATGGAGCC+AGG - chr3_2:79171451-79171470 Msa0428330:intron 45.0%
CGCATGATGGCTCTTCTTAA+AGG + chr3_2:79171477-79171496 None:intergenic 45.0%
! AAGAGCCATCATGCGACTTT+TGG - chr3_2:79171482-79171501 Msa0428330:intron 45.0%
ATCCTCCAAAAGTCGCATGA+TGG + chr3_2:79171490-79171509 None:intergenic 45.0%
! TAATGACTCTTGAGTACCGC+TGG + chr3_2:79171610-79171629 None:intergenic 45.0%
TGCTAAGGGAAAACGTGACT+GGG + chr3_2:79171756-79171775 None:intergenic 45.0%
!! CTTGATTTGCTAGGCTGCTA+AGG + chr3_2:79171771-79171790 None:intergenic 45.0%
GGGATAGGGGAAAACCAAAA+AGG - chr3_2:79171825-79171844 Msa0428330:intron 45.0%
! GGGAAAACCAAAAAGGGTGT+GGG - chr3_2:79171832-79171851 Msa0428330:intron 45.0%
! CATCATTCCCACACCCTTTT+TGG + chr3_2:79171842-79171861 None:intergenic 45.0%
! TCCATGGCTATTTCGGAAGT+TGG - chr3_2:79171905-79171924 Msa0428330:intron 45.0%
TCCAACTTCCGAAATAGCCA+TGG + chr3_2:79171909-79171928 None:intergenic 45.0%
AATGTTGTCCCCCAATGTAC+AGG - chr3_2:79172073-79172092 Msa0428330:five_prime_UTR 45.0%
ATGTTGTCCCCCAATGTACA+GGG - chr3_2:79172074-79172093 Msa0428330:five_prime_UTR 45.0%
ACATGCAACCCTGTACATTG+GGG + chr3_2:79172085-79172104 None:intergenic 45.0%
GACATGCAACCCTGTACATT+GGG + chr3_2:79172086-79172105 None:intergenic 45.0%
AGACATGCAACCCTGTACAT+TGG + chr3_2:79172087-79172106 None:intergenic 45.0%
TGTACAGGGTTGCATGTCTT+AGG - chr3_2:79172088-79172107 Msa0428330:five_prime_UTR 45.0%
!!! TTTTAATTTAAAAATTAAAG+TGG - chr3_2:79168709-79168728 Msa0428330:CDS 5.0%
AGCCGGATATTCGGGAATCA+TGG - chr3_2:79165843-79165862 Msa0428330:CDS 50.0%
ATGTGTGCTCTGCGAACAAG+TGG - chr3_2:79165967-79165986 Msa0428330:CDS 50.0%
GTACGAAGTCCTGAGAAACC+TGG + chr3_2:79166003-79166022 None:intergenic 50.0%
AATTTCTACACGGCGGGCAA+GGG - chr3_2:79166086-79166105 Msa0428330:CDS 50.0%
CTCCGTGAAACGCTCAAACA+TGG + chr3_2:79166133-79166152 None:intergenic 50.0%
TGTTAGCTCAAGAGGAGGCA+AGG - chr3_2:79166172-79166191 Msa0428330:CDS 50.0%
!! GGTCTTATTGGTGAAGGCAC+TGG - chr3_2:79166237-79166256 Msa0428330:CDS 50.0%
CGCTTTGCACGAGGAGTAAA+CGG + chr3_2:79166369-79166388 None:intergenic 50.0%
TCCTCGTGCAAAGCGTGTAT+TGG - chr3_2:79166374-79166393 Msa0428330:CDS 50.0%
TCCAATACACGCTTTGCACG+AGG + chr3_2:79166378-79166397 None:intergenic 50.0%
GCTCCAAACCCCGTAATACA+TGG - chr3_2:79166817-79166836 Msa0428330:intron 50.0%
GTGGCACACCATGTATTACG+GGG + chr3_2:79166828-79166847 None:intergenic 50.0%
CGTGGCACACCATGTATTAC+GGG + chr3_2:79166829-79166848 None:intergenic 50.0%
GCTTCTAGGTCTTCTTCGAG+AGG - chr3_2:79167286-79167305 Msa0428330:intron 50.0%
AGCCCGTGTTCTTGAAAACC+TGG - chr3_2:79167322-79167341 Msa0428330:CDS 50.0%
GCCCGTGTTCTTGAAAACCT+GGG - chr3_2:79167323-79167342 Msa0428330:CDS 50.0%
!! GCCCAGGTTTTCAAGAACAC+GGG + chr3_2:79167327-79167346 None:intergenic 50.0%
!! CGCCCAGGTTTTCAAGAACA+CGG + chr3_2:79167328-79167347 None:intergenic 50.0%
TATTAGTAGGATCAGCGCCC+AGG + chr3_2:79167343-79167362 None:intergenic 50.0%
GGCATAGGTTATTCGCATGG+TGG - chr3_2:79167470-79167489 Msa0428330:intron 50.0%
!! GTTACTGCTACTGTTGGCTC+GGG - chr3_2:79167510-79167529 Msa0428330:intron 50.0%
! TTGTTTCTCACCTGTCCCTC+AGG - chr3_2:79167667-79167686 Msa0428330:intron 50.0%
TGTTTCTCACCTGTCCCTCA+GGG - chr3_2:79167668-79167687 Msa0428330:intron 50.0%
CAGGATCCAACTTTCCCTGA+GGG + chr3_2:79167685-79167704 None:intergenic 50.0%
ACAGGATCCAACTTTCCCTG+AGG + chr3_2:79167686-79167705 None:intergenic 50.0%
GGGAAAGTTGGATCCTGTTG+TGG - chr3_2:79167688-79167707 Msa0428330:intron 50.0%
GGTGCGACGGCCTAAAATTT+GGG + chr3_2:79167741-79167760 None:intergenic 50.0%
TGGTGCGACGGCCTAAAATT+TGG + chr3_2:79167742-79167761 None:intergenic 50.0%
ATTGCTGTCTTCCCAACACC+AGG + chr3_2:79167791-79167810 None:intergenic 50.0%
AATCCGCTGAGCAAGACCTT+CGG + chr3_2:79167816-79167835 None:intergenic 50.0%
!! CTTGCTCAGCGGATTGCAAA+TGG - chr3_2:79167821-79167840 Msa0428330:intron 50.0%
! TCCTCACAAGTTGGCAAAGG+AGG - chr3_2:79168102-79168121 Msa0428330:CDS 50.0%
TACAAGCAGACCCATGTCGA+GGG + chr3_2:79168257-79168276 None:intergenic 50.0%
GTAGCCGGTACTAAATACCG+TGG - chr3_2:79168274-79168293 Msa0428330:intron 50.0%
ACCTCTCCTCAAACTCACCA+CGG + chr3_2:79168294-79168313 None:intergenic 50.0%
GTGCACACACTAATTGGAGC+AGG - chr3_2:79168373-79168392 Msa0428330:intron 50.0%
TCTTGCAAGAGGCGAACTAC+AGG - chr3_2:79168441-79168460 Msa0428330:intron 50.0%
! TGGGAAAAGGTTCTGACCTC+TGG - chr3_2:79168603-79168622 Msa0428330:intron 50.0%
CAGCAGAGTGAACAACCAGT+AGG + chr3_2:79168743-79168762 None:intergenic 50.0%
GGAATCGTCTCTCCAAAGCT+GGG + chr3_2:79168863-79168882 None:intergenic 50.0%
TGGAATCGTCTCTCCAAAGC+TGG + chr3_2:79168864-79168883 None:intergenic 50.0%
GGGCAAAAATCGATCACTGC+AGG + chr3_2:79169702-79169721 None:intergenic 50.0%
AGTCCGTCTTCAACATGCAC+AGG - chr3_2:79169760-79169779 Msa0428330:CDS 50.0%
GTGGTTTCAGTTGCCAGAAG+AGG - chr3_2:79169884-79169903 Msa0428330:intron 50.0%
GGCACTTGTAGAGAAAGGCA+AGG - chr3_2:79170519-79170538 Msa0428330:intron 50.0%
GATGAGCAAAGCAGAGAGTG+AGG - chr3_2:79170543-79170562 Msa0428330:intron 50.0%
ACATATCGTGTCCTCCTGGA+CGG - chr3_2:79170606-79170625 Msa0428330:intron 50.0%
ATCTGATCGCCTCCTCAAGA+TGG - chr3_2:79170660-79170679 Msa0428330:intron 50.0%
ACACAAGCGAGTCATTGGTC+AGG - chr3_2:79170693-79170712 Msa0428330:CDS 50.0%
!! CTTTTCTGGTCCAACTGGTG+TGG - chr3_2:79170801-79170820 Msa0428330:CDS 50.0%
! TTTCTGGTCCAACTGGTGTG+GGG - chr3_2:79170803-79170822 Msa0428330:CDS 50.0%
TGGTGTGGGGAAGTCTGAAT+TGG - chr3_2:79170816-79170835 Msa0428330:CDS 50.0%
GTAGTAGGCAGCCAATGCTT+TGG + chr3_2:79170842-79170861 None:intergenic 50.0%
!! GCATTGGCTGCCTACTACTT+TGG - chr3_2:79170844-79170863 Msa0428330:CDS 50.0%
GGTTCACCTCCTGGATATGT+TGG - chr3_2:79170937-79170956 Msa0428330:CDS 50.0%
CAGGCAACTCACAAAACTGG+AGG - chr3_2:79171317-79171336 Msa0428330:intron 50.0%
AGCAGACATAATGCTCAGGG+AGG - chr3_2:79171350-79171369 Msa0428330:intron 50.0%
GATGGCTCTTCTTAAAGGCC+TGG + chr3_2:79171472-79171491 None:intergenic 50.0%
! AGCCATCATGCGACTTTTGG+AGG - chr3_2:79171485-79171504 Msa0428330:intron 50.0%
!! GCGACTTTTGGAGGATAGCA+TGG - chr3_2:79171494-79171513 Msa0428330:intron 50.0%
CTCGCCAGAGAGATCAAAGA+GGG - chr3_2:79171528-79171547 Msa0428330:intron 50.0%
GTCACCCTCTTTGATCTCTC+TGG + chr3_2:79171535-79171554 None:intergenic 50.0%
AGAGGGTGACTCCGTAATAG+TGG - chr3_2:79171545-79171564 Msa0428330:intron 50.0%
CTGCTAAGGGAAAACGTGAC+TGG + chr3_2:79171757-79171776 None:intergenic 50.0%
GGGGAAAACCAAAAAGGGTG+TGG - chr3_2:79171831-79171850 Msa0428330:intron 50.0%
CATGCAACCCTGTACATTGG+GGG + chr3_2:79172084-79172103 None:intergenic 50.0%
!! GGGAATCATGGCTCGGGTTT+TGG - chr3_2:79165855-79165874 Msa0428330:CDS 55.0%
TTGTGCCCAACCACTAGACC+AGG + chr3_2:79165898-79165917 None:intergenic 55.0%
CAATTTCTACACGGCGGGCA+AGG - chr3_2:79166085-79166104 Msa0428330:CDS 55.0%
! CGGGGTTTGGAGCAATCACT+TGG + chr3_2:79166810-79166829 None:intergenic 55.0%
AGGTCTTCTTCGAGAGGGTG+AGG - chr3_2:79167292-79167311 Msa0428330:intron 55.0%
GGTCTTCTTCGAGAGGGTGA+GGG - chr3_2:79167293-79167312 Msa0428330:intron 55.0%
ACCTGTCCCTCAGGGAAAGT+TGG - chr3_2:79167676-79167695 Msa0428330:intron 55.0%
TCCAACTTTCCCTGAGGGAC+AGG + chr3_2:79167680-79167699 None:intergenic 55.0%
TGTGGCTGTCTTCCCACAAC+AGG + chr3_2:79167704-79167723 None:intergenic 55.0%
GGGAAGACAGCAATTGCCGA+AGG - chr3_2:79167797-79167816 Msa0428330:intron 55.0%
TTGCCGAAGGTCTTGCTCAG+CGG - chr3_2:79167810-79167829 Msa0428330:intron 55.0%
GCCTCCTTTGCCAACTTGTG+AGG + chr3_2:79168106-79168125 None:intergenic 55.0%
CTACAAGCAGACCCATGTCG+AGG + chr3_2:79168258-79168277 None:intergenic 55.0%
GACATGGGTCTGCTTGTAGC+CGG - chr3_2:79168259-79168278 Msa0428330:CDS 55.0%
ACCGTGGTGAGTTTGAGGAG+AGG - chr3_2:79168290-79168309 Msa0428330:intron 55.0%
AGTTCGCCTCTTGCAAGAGC+TGG + chr3_2:79168439-79168458 None:intergenic 55.0%
! GGATCTAAGGGCGCAGATCT+CGG - chr3_2:79170498-79170517 Msa0428330:intron 55.0%
CATATCGTGTCCTCCTGGAC+GGG - chr3_2:79170607-79170626 Msa0428330:intron 55.0%
ATCAACAGGAATGCCCGTCC+AGG + chr3_2:79170623-79170642 None:intergenic 55.0%
TCGACGGATAGCCCGACTAA+TGG + chr3_2:79170734-79170753 None:intergenic 55.0%
TCAATCCAACCCGTGCTCGA+CGG + chr3_2:79170750-79170769 None:intergenic 55.0%
TCAGACTTCCCCACACCAGT+TGG + chr3_2:79170814-79170833 None:intergenic 55.0%
GGACAGTAAAGGCCGAACTG+TGG - chr3_2:79171095-79171114 Msa0428330:CDS 55.0%
GAGAAAGGAGGTCGCCGAAT+TGG - chr3_2:79171171-79171190 Msa0428330:CDS 55.0%
AAAGGCCTGGCTCCATAGCT+AGG + chr3_2:79171459-79171478 None:intergenic 55.0%
GCTCGCCAGAGAGATCAAAG+AGG - chr3_2:79171527-79171546 Msa0428330:intron 55.0%
! CAAGAGGAGGCAAGGCGTCT+TGG - chr3_2:79166180-79166199 Msa0428330:CDS 60.0%
CTCGAGGAAGCTCGCCAACT+TGG - chr3_2:79166405-79166424 Msa0428330:CDS 60.0%
ATTGGAGCAGGAGCAGCCGA+AGG - chr3_2:79168385-79168404 Msa0428330:intron 60.0%
GAGAGTGAGGCAGCAGACGA+AGG - chr3_2:79170556-79170575 Msa0428330:intron 60.0%
AACAGGAATGCCCGTCCAGG+AGG + chr3_2:79170620-79170639 None:intergenic 60.0%
AGGGACAGGGTGGTTGACGA+AGG - chr3_2:79171426-79171445 Msa0428330:intron 60.0%
!! AGGCACTGGTATCGCCGCCA+AGG - chr3_2:79166251-79166270 Msa0428330:CDS 65.0%
GTCGGGCTATCCGTCGAGCA+CGG - chr3_2:79170737-79170756 Msa0428330:CDS 65.0%
TCGGGCTATCCGTCGAGCAC+GGG - chr3_2:79170738-79170757 Msa0428330:CDS 65.0%
GCTATCCGTCGAGCACGGGT+TGG - chr3_2:79170742-79170761 Msa0428330:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 79164921 79172169 79164921 ID=Msa0428330;Name=Msa0428330
chr3_2 mRNA 79164921 79172169 79164921 ID=Msa0428330-mRNA-1;Parent=Msa0428330;Name=Msa0428330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=226|1|1|1|0.8|0.72|11|519|922
chr3_2 exon 79164921 79166618 79164921 ID=Msa0428330-mRNA-1:exon:21267;Parent=Msa0428330-mRNA-1
chr3_2 exon 79167107 79167196 79167107 ID=Msa0428330-mRNA-1:exon:21266;Parent=Msa0428330-mRNA-1
chr3_2 exon 79167309 79167384 79167309 ID=Msa0428330-mRNA-1:exon:21265;Parent=Msa0428330-mRNA-1
chr3_2 exon 79168063 79168280 79168063 ID=Msa0428330-mRNA-1:exon:21264;Parent=Msa0428330-mRNA-1
chr3_2 exon 79168628 79168843 79168628 ID=Msa0428330-mRNA-1:exon:21263;Parent=Msa0428330-mRNA-1
chr3_2 exon 79169216 79169401 79169216 ID=Msa0428330-mRNA-1:exon:21262;Parent=Msa0428330-mRNA-1
chr3_2 exon 79169491 79169613 79169491 ID=Msa0428330-mRNA-1:exon:21261;Parent=Msa0428330-mRNA-1
chr3_2 exon 79169717 79169832 79169717 ID=Msa0428330-mRNA-1:exon:21260;Parent=Msa0428330-mRNA-1
chr3_2 exon 79170664 79171245 79170664 ID=Msa0428330-mRNA-1:exon:21259;Parent=Msa0428330-mRNA-1
chr3_2 exon 79171941 79171980 79171941 ID=Msa0428330-mRNA-1:exon:21258;Parent=Msa0428330-mRNA-1
chr3_2 exon 79172001 79172169 79172001 ID=Msa0428330-mRNA-1:exon:21257;Parent=Msa0428330-mRNA-1
chr3_2 five_prime_UTR 79172001 79172169 79172001 ID=Msa0428330-mRNA-1:five_prime_utr;Parent=Msa0428330-mRNA-1
chr3_2 five_prime_UTR 79171941 79171980 79171941 ID=Msa0428330-mRNA-1:five_prime_utr;Parent=Msa0428330-mRNA-1
chr3_2 five_prime_UTR 79171229 79171245 79171229 ID=Msa0428330-mRNA-1:five_prime_utr;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79170664 79171228 79170664 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79169717 79169832 79169717 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79169491 79169613 79169491 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79169216 79169401 79169216 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79168628 79168843 79168628 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79168063 79168280 79168063 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79167309 79167384 79167309 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79167107 79167196 79167107 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 CDS 79165440 79166618 79165440 ID=Msa0428330-mRNA-1:cds;Parent=Msa0428330-mRNA-1
chr3_2 three_prime_UTR 79164921 79165439 79164921 ID=Msa0428330-mRNA-1:three_prime_utr;Parent=Msa0428330-mRNA-1
Gene Sequence

>Msa0428330

ATGGCTCGGGTTTTGGCTCAGTCGATTAATGTTCCTGGTCTAGTGGTTGGGCACAAGCAAAGTCAACATAAGGGATCGGGAAAATCTAAAAGATCAGTTAAAATGATGTGTGCTCTGCGAACAAGTGGATTAAGAATGCCAGGTTTCTCAGGACTTCGTACTATCAATCATTTGGATACTATGCTGAAACCTGGGCTAGATTTTCACGCAAAGGTATCAATGGCAATTTCTACACGGCGGGCAAGGGCTAAGAGAATCATACCTAGAGCCATGTTTGAGCGTTTCACGGAGAAAGCAATCAAAGTGATAATGTTAGCTCAAGAGGAGGCAAGGCGTCTTGGTCACAATTTTGTTGGAACAGAGCAGATTCTACTGGGTCTTATTGGTGAAGGCACTGGTATCGCCGCCAAGGTTTTAAAGTCTATGGGAATCAACCTTAAAGATGCACGAGTGGAAGTGGAGAAGATAATTGGAAGAGGTAGTGGATTTGTTGCCGTTGAAATTCCGTTTACTCCTCGTGCAAAGCGTGTATTGGAACTTTCACTCGAGGAAGCTCGCCAACTTGGGCACAATTATATTGGATCAGAACACTTGCTTCTAGGTCTTCTTCGAGAGGGTGAGGGTGTAGCAGCCCGTGTTCTTGAAAACCTGGGCGCTGATCCTACTAATATTCGCACACAGGTTATTCGCATGGTGGGTGAGAGTGCTGACAATGTTACTGCTACTGTTGGCTCGGGAAGTAGTAACAATAAAACACCAACTTTGGAGGAGTATGGAACCAATTTGACCAAGCTAGCAGAAGAGGGAAAGTTGGATCCTGTTGTGGGAAGACAGCCACAAATTGAACGTGTCACCCAAATTTTAGGCCGTCGCACCAAAAATAATCCTTGTCTTATTGGAGAACCTGGTGTTGGGAAGACAGCAATTGCCGAAGGTCTTGCTCAGCGGATTGCAAATGGTGATGTACCTGAAACAATCGAGGGAAAAAAGGTTATAACCCTCGACATGGGTCTGCTTGTAGCCGGTACTAAATACCGTGGTGAGTTTGAGGAGAGGTTGAAGAAACTGATGGAAGAAATCAAACAAAGTGATGATATAATACTTTTTATCGATGAAGTGCACACACTAATTGGAGCAGGAGCAGCCGAAGGTGCAATTGATGCTGCTAACATACTAAAACCAGCTCTTGCAAGAGGCGAACTACAGTGTATTGGAGCCACAACATTGGATGAATACAGGAAGCACATCGAAAAAGACCCAGCTTTGGAGAGACGATTCCAGCCAGTTAAAGTACCAGAACCAACTGTTGATGAAACCATACAAATACTGAAAGGACTTAGAGAACGTTATGAAATTCACCACAAGCTTCGATATACTGATGACGCTCTTATAGCTGCTGCGCAACTTTCATACCAGTATATCAGTGATCGATTTTTGCCCGACAAAGCCATTGATTTGATTGATGAAGCTGGTTCACGAGTCCGTCTTCAACATGCACAGTTGCCAGAAGAGGCAAAAGAACTTGACAAGGAGGTCAGGAAGATTGTTAAAGAGAAAGAGGAATTTGTTCGCAACCAAGACTTTGAAAAGGCTGGAGAACTACGTGATAAAGAAATGGATCTAAGGGCGCAGATCTCGGCACTTGTAGAGAAAGGCAAGGAGATGAGCAAAGCAGAGAGTGAGGCAGCAGACGAAGGTCCTATTGTGACTGAAGTTGACATTCAACATATCGTGTCCTCCTGGACGGGCATTCCTGTTGATAAAGTCTCAGCAGATGAATCTGATCGCCTCCTCAAGATGGAAGATACTTTACACAAGCGAGTCATTGGTCAGGATGAAGCAGTAGAAGCCATTAGTCGGGCTATCCGTCGAGCACGGGTTGGATTGAAGAACCCTAACCGTCCAATTGCTAGCTTCATCTTTTCTGGTCCAACTGGTGTGGGGAAGTCTGAATTGGCCAAAGCATTGGCTGCCTACTACTTTGGCTCTGAAGAAGCCATGATTCGTCTTGACATGAGTGAGTTTATGGAAAGGCACACTGTCTCCAAACTTATTGGTTCACCTCCTGGATATGTTGGTTACACTGAAGGTGGTCAGTTGACTGAAGCAGTTCGTCGTCGTCCTTACACTGTTGTACTCTTTGATGAGATCGAGAAAGCCCATCCTGATGTATTCAACATGATGCTTCAGATCCTTGAAGATGGAAGACTAACGGACAGTAAAGGCCGAACTGTGGATTTCAAGAACACACTTCTTATAATGACGTCAAATGTTGGAAGCAGTGTGATTGAGAAAGGAGGTCGCCGAATTGGATTCGATCTTGATTATGATGAGAAAGACAGCAGTTATAATAGAATCAAGAGTTTGGTGACTGAGGAACTAAAACAATACTTCAGGCCAGAGTTTTTAAATAGGTTGGATGAAATGATTGTTTTCAGGCAACTCACAAAACTGGAGGTGAAGGAAATAGCAGACATAATGCTCAGGGAGGTGTTTCAGAGACTGAAGAACAAAGAAATTGAACTTCAAGTAACAGAAAGATTTAGGGACAGGGTGGTTGACGAAGGTTATAATCCTAGCTATGGAGCCAGGCCTTTAAGAAGAGCCATCATGCGACTTTTGGAGGATAGCATGGCTGAGAAGATGCTCGCCAGAGAGATCAAAGAGGGTGACTCCGTAATAGTGGATGTTGATTCCGACGGTAATGTGATTGTTCTCAATGGTACCAGCGGTACTCAAGAGTCATTACCAGAGGCTCTTGCTATATAA
Protein sequence

>Msa0428330

MARVLAQSINVPGLVVGHKQSQHKGSGKSKRSVKMMCALRTSGLRMPGFSGLRTINHLDTMLKPGLDFHAKVSMAISTRRARAKRIIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADNVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEFVRNQDFEKAGELRDKEMDLRAQISALVEKGKEMSKAESEAADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRVIGQDEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLREVFQRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGTSGTQESLPEALAI*