Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283270 | XP_003595066.1 | 97.643 | 297 | 5 | 2 | 1 | 296 | 1 | 296 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283270 | G7IG80 | 97.643 | 297 | 5 | 2 | 1 | 296 | 1 | 296 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0283270 | Msa0283570 | 0.973179 | 5.432772e-136 | -8.615850e-47 |
| Msa0283270 | Msa1409820 | 0.838694 | 2.470029e-57 | -8.615850e-47 |
| Msa0283270 | Msa1444430 | 0.995713 | 4.271776e-219 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283270 | MtrunA17_Chr2g0298661 | 97.315 | 298 | 5 | 3 | 1 | 296 | 1 | 297 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283270 | AT4G29960.1 | 62.182 | 275 | 85 | 7 | 25 | 293 | 28 | 289 | 1.26e-97 | 289 |
Find 136 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGCCTCTGCCAGCTTC+TGG | 0.083546 | 2_3:+20326997 | None:intergenic |
| GAAGTAAACGGCACCGTTTC+GGG | 0.177318 | 2_3:+20330493 | None:intergenic |
| TTTATCACTTCCCTGCTTCC+TGG | 0.205047 | 2_3:-20326922 | Msa0283270:CDS |
| GTAGTTTGATTGATAAATTT+AGG | 0.230333 | 2_3:+20330532 | None:intergenic |
| TGCTGCTGCCGGTGAAAATC+AGG | 0.245689 | 2_3:-20327946 | Msa0283270:CDS |
| GCTATACACCTTATCATATT+CGG | 0.263262 | 2_3:+20326833 | None:intergenic |
| TCAGCCCTGGCTGCAGGTCT+TGG | 0.293292 | 2_3:+20327404 | None:intergenic |
| TAGTTTGATTGATAAATTTA+GGG | 0.301230 | 2_3:+20330533 | None:intergenic |
| CATTGCCTCTGCCAGCTTCT+GGG | 0.309185 | 2_3:+20326998 | None:intergenic |
| AACTATGGTGATAATTTATA+AGG | 0.311191 | 2_3:-20326745 | Msa0283270:three_prime_UTR |
| GTCATAACTAATACATATTT+AGG | 0.314953 | 2_3:-20326794 | Msa0283270:three_prime_UTR |
| ATGCACCCTGCATTGATTCC+AGG | 0.344373 | 2_3:-20329585 | Msa0283270:CDS |
| CTATACACCTTATCATATTC+GGG | 0.352459 | 2_3:+20326834 | None:intergenic |
| TTCCAATTTGCCGGCCTATC+CGG | 0.357512 | 2_3:-20329634 | Msa0283270:CDS |
| TGCGGTAAGTCAATGGAATC+AGG | 0.360834 | 2_3:+20329457 | None:intergenic |
| CAAGAACAGCGAATAAAATA+AGG | 0.361508 | 2_3:+20327763 | None:intergenic |
| GAAATGAAAATTTAACTCAT+TGG | 0.365391 | 2_3:+20330623 | None:intergenic |
| TGTCTATCAAAAGGATTAAC+AGG | 0.366467 | 2_3:+20329504 | None:intergenic |
| TGAAGTAAACGGCACCGTTT+CGG | 0.367186 | 2_3:+20330492 | None:intergenic |
| AGCCGGATAGGCCGGCAAAT+TGG | 0.371911 | 2_3:+20329632 | None:intergenic |
| CTTCAATTCATTTAATTGTC+GGG | 0.378946 | 2_3:-20326564 | Msa0283270:three_prime_UTR |
| GTGACAGCATACCAGAAAAT+AGG | 0.391212 | 2_3:-20326867 | Msa0283270:three_prime_UTR |
| GGATATTACCAAATGTTTCC+TGG | 0.393625 | 2_3:-20329609 | Msa0283270:CDS |
| GCCTCTGCCTTGATCCATCT+TGG | 0.399332 | 2_3:+20327793 | None:intergenic |
| CCCTGGTGTCTGTTTATGAT+TGG | 0.401189 | 2_3:-20326619 | Msa0283270:three_prime_UTR |
| TCCTGGGTTCCACAATCATA+TGG | 0.403844 | 2_3:-20326905 | Msa0283270:CDS |
| AATTTAACTCATTGGATTTG+AGG | 0.421789 | 2_3:+20330631 | None:intergenic |
| TTGGCAACCACCTGCCCTGC+AGG | 0.422864 | 2_3:+20327371 | None:intergenic |
| GTCCACCAAGACCTGCAGCC+AGG | 0.426345 | 2_3:-20327409 | Msa0283270:CDS |
| TCCAGCAGAAAACAAAACTA+TGG | 0.430644 | 2_3:-20326760 | Msa0283270:three_prime_UTR |
| CCTTCAATTCATTTAATTGT+CGG | 0.431451 | 2_3:-20326565 | Msa0283270:three_prime_UTR |
| TTTAATTGTCGGGAGTTTGT+CGG | 0.437137 | 2_3:-20326554 | Msa0283270:three_prime_UTR |
| CCGACAATTAAATGAATTGA+AGG | 0.437652 | 2_3:+20326565 | None:intergenic |
| TTATCACTTCCCTGCTTCCT+GGG | 0.438002 | 2_3:-20326921 | Msa0283270:CDS |
| ACTTCTGAAGCTGCTGCTGC+CGG | 0.440502 | 2_3:-20327957 | Msa0283270:CDS |
| GAACCTGCGAACCGTGGAGC+TGG | 0.451209 | 2_3:-20329540 | Msa0283270:CDS |
| TGGTTCTCAATGGCAGCATC+AGG | 0.451911 | 2_3:+20327063 | None:intergenic |
| CTCTGAGGTGCAGGCTGCTG+AGG | 0.452932 | 2_3:+20327903 | None:intergenic |
| ATCAATGCAGGGTGCATACC+AGG | 0.458389 | 2_3:+20329591 | None:intergenic |
| AATGGAATCAGGGTGTTGTA+TGG | 0.461274 | 2_3:+20329468 | None:intergenic |
| GCCCTGGCTGCAGGTCTTGG+TGG | 0.464321 | 2_3:+20327407 | None:intergenic |
| GCAATGGTGGCAACCAGTGG+TGG | 0.470017 | 2_3:-20326981 | Msa0283270:CDS |
| TGTGAAAGCCATCTTACAAT+CGG | 0.470728 | 2_3:+20327461 | None:intergenic |
| CCGGTAACATGTCTATCAAA+AGG | 0.474598 | 2_3:+20329495 | None:intergenic |
| GATTGTGGAACCCAGGAAGC+AGG | 0.475098 | 2_3:+20326911 | None:intergenic |
| GCAGCAGCAGCTTCAGAAGT+TGG | 0.476019 | 2_3:+20327960 | None:intergenic |
| TTCGCAGGTTCCTCAATTTG+TGG | 0.476969 | 2_3:+20329552 | None:intergenic |
| GGTGCATACCAGGAAACATT+TGG | 0.481967 | 2_3:+20329601 | None:intergenic |
| AATTTGCCGGCCTATCCGGC+TGG | 0.485860 | 2_3:-20329630 | Msa0283270:CDS |
| CAGGGTGTTGTATGGAAGTC+CGG | 0.489052 | 2_3:+20329476 | None:intergenic |
| TGTTCAACCAAGATGGATCA+AGG | 0.490896 | 2_3:-20327800 | Msa0283270:CDS |
| CCAGAAGCTGGCAGAGGCAA+TGG | 0.491181 | 2_3:-20326997 | Msa0283270:CDS |
| GTTGCCAATGCTCCTCCAGC+AGG | 0.493494 | 2_3:-20327356 | Msa0283270:intron |
| CTCAGAGACAAGTTGTTGTA+AGG | 0.495844 | 2_3:-20327887 | Msa0283270:CDS |
| AAATGTACCTCCTGCAGGGC+AGG | 0.497728 | 2_3:-20327381 | Msa0283270:CDS |
| GTTCACTTACCCACTCTAGA+AGG | 0.501018 | 2_3:+20326429 | None:intergenic |
| AATGAGAATGTCCCAGAAGC+TGG | 0.502270 | 2_3:-20327009 | Msa0283270:CDS |
| GCACGGTCTGCACCATTACC+AGG | 0.502582 | 2_3:+20327039 | None:intergenic |
| CAATGGTGGCAACCAGTGGT+GGG | 0.503431 | 2_3:-20326980 | Msa0283270:CDS |
| TGCACCCTGCATTGATTCCA+GGG | 0.504551 | 2_3:-20329584 | Msa0283270:CDS |
| TCCACCAAGACCTGCAGCCA+GGG | 0.504594 | 2_3:-20327408 | Msa0283270:CDS |
| GCTGAAAATGTACCTCCTGC+AGG | 0.507702 | 2_3:-20327386 | Msa0283270:CDS |
| CAAATTACTTCCCTGTGCCC+TGG | 0.507886 | 2_3:+20326670 | None:intergenic |
| GCTGCAGGTCTTGGTGGACG+AGG | 0.508079 | 2_3:+20327413 | None:intergenic |
| GTCAACCCTGGAATCAATGC+AGG | 0.510845 | 2_3:+20329579 | None:intergenic |
| CCGGCAAATTGGAAAATGTC+GGG | 0.512491 | 2_3:+20329643 | None:intergenic |
| GCTGCTGCCGGTGAAAATCA+GGG | 0.513650 | 2_3:-20327945 | Msa0283270:CDS |
| AAGCCAGCTCCACGGTTCGC+AGG | 0.514593 | 2_3:+20329537 | None:intergenic |
| GAAGTAATTTGTACTTCAGA+GGG | 0.516768 | 2_3:-20326658 | Msa0283270:three_prime_UTR |
| ACAACTTGTCTCTGAGGTGC+AGG | 0.518547 | 2_3:+20327894 | None:intergenic |
| CTCTGACACCGATTGTAAGA+TGG | 0.519517 | 2_3:-20327469 | Msa0283270:CDS |
| CCTTTACAATGCCCCACCAC+TGG | 0.522720 | 2_3:+20326968 | None:intergenic |
| TCGGTGTCAGAGCTCCAGTT+TGG | 0.523774 | 2_3:+20327480 | None:intergenic |
| ATGTGTTACAGATACCAAAC+TGG | 0.523883 | 2_3:-20327494 | Msa0283270:intron |
| TTTGCTACTTATGTTGAAGC+TGG | 0.525091 | 2_3:-20327838 | Msa0283270:CDS |
| GGCAGTTGTTAATCCACCCC+TGG | 0.528965 | 2_3:-20326636 | Msa0283270:three_prime_UTR |
| GTAGGTGTGCGGTAAGTCAA+TGG | 0.530263 | 2_3:+20329450 | None:intergenic |
| CATACCTGCTGGAGGAGCAT+TGG | 0.530298 | 2_3:+20327352 | None:intergenic |
| GGGAGAGGTTGTGAAGTAAA+CGG | 0.536857 | 2_3:+20330481 | None:intergenic |
| GTGGGTAAGTGAACTGATAG+TGG | 0.538300 | 2_3:-20326420 | Msa0283270:three_prime_UTR |
| CATTCTCATTCTCGATTGCA+CGG | 0.538860 | 2_3:+20327022 | None:intergenic |
| CCAGTGGTGGGGCATTGTAA+AGG | 0.540989 | 2_3:-20326968 | Msa0283270:CDS |
| GGAAGTAATTTGTACTTCAG+AGG | 0.541496 | 2_3:-20326659 | Msa0283270:three_prime_UTR |
| GTTGACTCCACCACAAATTG+AGG | 0.541577 | 2_3:-20329562 | Msa0283270:CDS |
| AATGGTGGCAACCAGTGGTG+GGG | 0.541711 | 2_3:-20326979 | Msa0283270:CDS |
| ATTGAGAACCAGCCTGGTAA+TGG | 0.544812 | 2_3:-20327051 | Msa0283270:CDS |
| TAATATCCAGCCGGATAGGC+CGG | 0.549385 | 2_3:+20329624 | None:intergenic |
| ATTACCAGGCTGGTTCTCAA+TGG | 0.550682 | 2_3:+20327053 | None:intergenic |
| AGCTATGGTGCCTTCTAGAG+TGG | 0.554870 | 2_3:-20326439 | Msa0283270:three_prime_UTR |
| TTGGTAATATCCAGCCGGAT+AGG | 0.559088 | 2_3:+20329620 | None:intergenic |
| ATCGCCACAAGATCCATCTC+AGG | 0.560810 | 2_3:-20330437 | Msa0283270:intron |
| GCAGGTTCCTCAATTTGTGG+TGG | 0.561832 | 2_3:+20329555 | None:intergenic |
| ATTGTGGAACCCAGGAAGCA+GGG | 0.566256 | 2_3:+20326912 | None:intergenic |
| GAAGAGGAAGAAGGTGGGAG+AGG | 0.566409 | 2_3:+20330466 | None:intergenic |
| AACATTTGGTAATATCCAGC+CGG | 0.568144 | 2_3:+20329615 | None:intergenic |
| GCCGGCAAATTGGAAAATGT+CGG | 0.569653 | 2_3:+20329642 | None:intergenic |
| CTGCTGCCGGTGAAAATCAG+GGG | 0.574488 | 2_3:-20327944 | Msa0283270:CDS |
| ACCAAGATGGATCAAGGCAG+AGG | 0.574890 | 2_3:-20327794 | Msa0283270:CDS |
| ATTTGTGGTGGAGTCAACCC+TGG | 0.577781 | 2_3:+20329567 | None:intergenic |
| GAGGCAATGGTGGCAACCAG+TGG | 0.581630 | 2_3:-20326984 | Msa0283270:CDS |
| TTTCTGCAAAACATGAGCTA+TGG | 0.581697 | 2_3:-20326454 | Msa0283270:three_prime_UTR |
| AATGTCCCAGAAGCTGGCAG+AGG | 0.582269 | 2_3:-20327003 | Msa0283270:CDS |
| GAAGCTGGCAGAGGCAATGG+TGG | 0.582333 | 2_3:-20326994 | Msa0283270:CDS |
| GATTTCTGCGAAGAGGAAGA+AGG | 0.583027 | 2_3:+20330457 | None:intergenic |
| TCCATATGATTGTGGAACCC+AGG | 0.583039 | 2_3:+20326904 | None:intergenic |
| CTGAAAATGTACCTCCTGCA+GGG | 0.583817 | 2_3:-20327385 | Msa0283270:CDS |
| AAGTAAACGGCACCGTTTCG+GGG | 0.585571 | 2_3:+20330494 | None:intergenic |
| ACCAATCATAAACAGACACC+AGG | 0.588818 | 2_3:+20326618 | None:intergenic |
| TGTACCTCCTGCAGGGCAGG+TGG | 0.590447 | 2_3:-20327378 | Msa0283270:CDS |
| GCAACCACCTGCCCTGCAGG+AGG | 0.610954 | 2_3:+20327374 | None:intergenic |
| GCAGGTCTTGGTGGACGAGG+AGG | 0.611372 | 2_3:+20327416 | None:intergenic |
| GGTCTGCACCATTACCAGGC+TGG | 0.611992 | 2_3:+20327043 | None:intergenic |
| TTTATGGCTTCCAGGGCACA+GGG | 0.614928 | 2_3:-20326680 | Msa0283270:three_prime_UTR |
| ACTACCTGAGATGGATCTTG+TGG | 0.615374 | 2_3:+20330433 | None:intergenic |
| ATTTATCAATCAAACTACAA+TGG | 0.620548 | 2_3:-20330527 | Msa0283270:exon |
| GCTATGGTGCCTTCTAGAGT+GGG | 0.623911 | 2_3:-20326438 | Msa0283270:three_prime_UTR |
| GCTGCCATTGAGAACCAGCC+TGG | 0.626238 | 2_3:-20327057 | Msa0283270:CDS |
| TTCTGCGAAGAGGAAGAAGG+TGG | 0.626579 | 2_3:+20330460 | None:intergenic |
| TAAGTCAATCCATATGATTG+TGG | 0.631095 | 2_3:+20326896 | None:intergenic |
| TTGTGGCGATTTCTGCGAAG+AGG | 0.631216 | 2_3:+20330450 | None:intergenic |
| GCGGTAAGTCAATGGAATCA+GGG | 0.639590 | 2_3:+20329458 | None:intergenic |
| ATTGAGGAACCTGCGAACCG+TGG | 0.639776 | 2_3:-20329546 | Msa0283270:CDS |
| TCTGCGAAGAGGAAGAAGGT+GGG | 0.642845 | 2_3:+20330461 | None:intergenic |
| GCATACCAGAAAATAGGAGA+GGG | 0.647009 | 2_3:-20326861 | Msa0283270:three_prime_UTR |
| AGTAAACGGCACCGTTTCGG+GGG | 0.647083 | 2_3:+20330495 | None:intergenic |
| TCATAAACAGACACCAGGGG+TGG | 0.659478 | 2_3:+20326623 | None:intergenic |
| AGCATACCAGAAAATAGGAG+AGG | 0.665811 | 2_3:-20326862 | Msa0283270:three_prime_UTR |
| CTTACAACAACTTGTCTCTG+AGG | 0.667166 | 2_3:+20327888 | None:intergenic |
| CAGCATATAAGCCAGCTCCA+CGG | 0.674149 | 2_3:+20329529 | None:intergenic |
| TCAACCCTGGAATCAATGCA+GGG | 0.679896 | 2_3:+20329580 | None:intergenic |
| AAGCAAATCATACCTGCTGG+AGG | 0.681082 | 2_3:+20327344 | None:intergenic |
| AATTGTCGGGAGTTTGTCGG+CGG | 0.695279 | 2_3:-20326551 | Msa0283270:three_prime_UTR |
| AAGCCACTTACGTAGGTGTG+CGG | 0.702356 | 2_3:+20329439 | None:intergenic |
| CAATCATAAACAGACACCAG+GGG | 0.720298 | 2_3:+20326620 | None:intergenic |
| AAGTAATTTGTACTTCAGAG+GGG | 0.729284 | 2_3:-20326657 | Msa0283270:three_prime_UTR |
| CCAATCATAAACAGACACCA+GGG | 0.734719 | 2_3:+20326619 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTATTATAAATACTAAAT+AGG | - | chr2_3:20326956-20326975 | Msa0283270:CDS | 10.0% |
| !! | GTTATTATAAATACTAAATA+GGG | - | chr2_3:20326957-20326976 | Msa0283270:CDS | 10.0% |
| !! | ATATATTTATACCTTTATAT+AGG | - | chr2_3:20327825-20327844 | Msa0283270:CDS | 10.0% |
| !!! | ATTTTAAACAATTCATTTTT+TGG | - | chr2_3:20328990-20329009 | Msa0283270:intron | 10.0% |
| !!! | TTTTAAACAATTCATTTTTT+GGG | - | chr2_3:20328991-20329010 | Msa0283270:intron | 10.0% |
| !!! | TGTATAATTTTTTAATTGAT+AGG | - | chr2_3:20330593-20330612 | Msa0283270:five_prime_UTR | 10.0% |
| !!! | TTTTTTAGATTTGAGATTTT+TGG | + | chr2_3:20326490-20326509 | None:intergenic | 15.0% |
| !! | TAGTTTGATTGATAAATTTA+GGG | + | chr2_3:20326543-20326562 | None:intergenic | 15.0% |
| !!! | ATTGTTATTTGTTATTAAAG+AGG | - | chr2_3:20327015-20327034 | Msa0283270:CDS | 15.0% |
| !!! | TCATTTTATTAAATTATCAC+AGG | - | chr2_3:20327135-20327154 | Msa0283270:intron | 15.0% |
| !! | GTAAACATATATATATATTG+TGG | - | chr2_3:20327243-20327262 | Msa0283270:intron | 15.0% |
| !! | TGTCAAAATATAAAATAGAA+AGG | - | chr2_3:20328286-20328305 | Msa0283270:intron | 15.0% |
| !!! | TTTTGGTATAATATTTGATT+AGG | - | chr2_3:20328487-20328506 | Msa0283270:intron | 15.0% |
| !!! | TTTAACGTATTTAATTTTAG+TGG | - | chr2_3:20329026-20329045 | Msa0283270:intron | 15.0% |
| !! | AATTGAATAGACAATAATAA+GGG | + | chr2_3:20329457-20329476 | None:intergenic | 15.0% |
| !! | AAATTGAATAGACAATAATA+AGG | + | chr2_3:20329458-20329477 | None:intergenic | 15.0% |
| !! | GAAATGAAAATTTAACTCAT+TGG | + | chr2_3:20326453-20326472 | None:intergenic | 20.0% |
| !! | GTAGTTTGATTGATAAATTT+AGG | + | chr2_3:20326544-20326563 | None:intergenic | 20.0% |
| !! | ATTTATCAATCAAACTACAA+TGG | - | chr2_3:20326546-20326565 | Msa0283270:three_prime_UTR | 20.0% |
| !! | AATCAATTAAACGAACAATT+AGG | + | chr2_3:20326711-20326730 | None:intergenic | 20.0% |
| !! | AATGGAAAAAAATTTCAAGA+TGG | - | chr2_3:20326849-20326868 | Msa0283270:three_prime_UTR | 20.0% |
| !! | ATGGAAAAAAATTTCAAGAT+GGG | - | chr2_3:20326850-20326869 | Msa0283270:three_prime_UTR | 20.0% |
| !! | ACACAAAAAAATGCTAAATT+AGG | + | chr2_3:20326905-20326924 | None:intergenic | 20.0% |
| !!! | TAAATAGGGTTTTAAATAGA+GGG | - | chr2_3:20326971-20326990 | Msa0283270:CDS | 20.0% |
| !!! | GTAAAAAGGGTATAAAATAA+AGG | + | chr2_3:20327288-20327307 | None:intergenic | 20.0% |
| !!! | AGCATATTTTATAGCTTTTT+TGG | - | chr2_3:20327791-20327810 | Msa0283270:CDS | 20.0% |
| !!! | ATTTTGTAACATGGATATAT+TGG | - | chr2_3:20327906-20327925 | Msa0283270:CDS | 20.0% |
| !! | GATATATTGGAAAATACATT+AGG | - | chr2_3:20327919-20327938 | Msa0283270:CDS | 20.0% |
| !! | TTTGTAATTAAATGTGAAAC+AGG | + | chr2_3:20328048-20328067 | None:intergenic | 20.0% |
| !! | ATTATACCAAAAAACTATAG+TGG | + | chr2_3:20328479-20328498 | None:intergenic | 20.0% |
| !! | TAATAGGTCATATTTGTAAA+AGG | - | chr2_3:20328708-20328727 | Msa0283270:intron | 20.0% |
| !!! | TAGTAATGCTTTTTTTTAAC+TGG | - | chr2_3:20329069-20329088 | Msa0283270:intron | 20.0% |
| !!! | AGTAATGCTTTTTTTTAACT+GGG | - | chr2_3:20329070-20329089 | Msa0283270:intron | 20.0% |
| !! | ATTGAATAGACAATAATAAG+GGG | + | chr2_3:20329456-20329475 | None:intergenic | 20.0% |
| !! | GTCATAACTAATACATATTT+AGG | - | chr2_3:20330279-20330298 | Msa0283270:intron | 20.0% |
| !! | AACTATGGTGATAATTTATA+AGG | - | chr2_3:20330328-20330347 | Msa0283270:intron | 20.0% |
| ! | AATTTAACTCATTGGATTTG+AGG | + | chr2_3:20326445-20326464 | None:intergenic | 25.0% |
| ! | AATAAATTTACAGAGCGAAA+TGG | - | chr2_3:20326831-20326850 | Msa0283270:three_prime_UTR | 25.0% |
| !!! | CTAAATAGGGTTTTAAATAG+AGG | - | chr2_3:20326970-20326989 | Msa0283270:CDS | 25.0% |
| !!! | TTTGTTATTAAAGAGGAATG+TGG | - | chr2_3:20327022-20327041 | Msa0283270:CDS | 25.0% |
| ! | AAGCACAAAATGTGTAAAAA+GGG | + | chr2_3:20327301-20327320 | None:intergenic | 25.0% |
| ! | TTGCTTTGTAAATATGTGAA+TGG | - | chr2_3:20327319-20327338 | Msa0283270:intron | 25.0% |
| ! | TGCTTTGTAAATATGTGAAT+GGG | - | chr2_3:20327320-20327339 | Msa0283270:intron | 25.0% |
| ! | TTCTGAATTCATGTGTTAAA+TGG | - | chr2_3:20327371-20327390 | Msa0283270:CDS | 25.0% |
| !! | TTTAAGCGAATTTTGTAACA+TGG | - | chr2_3:20327897-20327916 | Msa0283270:CDS | 25.0% |
| ! | AGTAAAAAAGGAAAGAGAAA+TGG | + | chr2_3:20328418-20328437 | None:intergenic | 25.0% |
| ! | ATAGTCGAATCAAGTAAAAA+AGG | + | chr2_3:20328430-20328449 | None:intergenic | 25.0% |
| !!! | TGTTATCCACTATAGTTTTT+TGG | - | chr2_3:20328470-20328489 | Msa0283270:intron | 25.0% |
| ! | CAAAGAACTTCAAAAGAATA+TGG | + | chr2_3:20328862-20328881 | None:intergenic | 25.0% |
| !! | ACCGTTTATTAATTTCCTTT+TGG | - | chr2_3:20329865-20329884 | Msa0283270:intron | 25.0% |
| ! | CCCAAAAGGAAATTAATAAA+CGG | + | chr2_3:20329869-20329888 | None:intergenic | 25.0% |
| !! | CCGTTTATTAATTTCCTTTT+GGG | - | chr2_3:20329866-20329885 | Msa0283270:intron | 25.0% |
| !!! | TTATTAATTTCCTTTTGGGA+TGG | - | chr2_3:20329870-20329889 | Msa0283270:intron | 25.0% |
| !!! | TATTAATTTCCTTTTGGGAT+GGG | - | chr2_3:20329871-20329890 | Msa0283270:intron | 25.0% |
| ! | CAATAGTTAATGACAAACAA+AGG | + | chr2_3:20329978-20329997 | None:intergenic | 25.0% |
| !! | CTTTGTTTGTCATTAACTAT+TGG | - | chr2_3:20329976-20329995 | Msa0283270:intron | 25.0% |
| ! | TAAATCCAAAAACAATCATC+TGG | + | chr2_3:20330135-20330154 | None:intergenic | 25.0% |
| !!! | GTCATTTTTGTATCATTACT+TGG | - | chr2_3:20330352-20330371 | Msa0283270:intron | 25.0% |
| !!! | TGTTGATAGAACAGTTTTTA+TGG | - | chr2_3:20330377-20330396 | Msa0283270:intron | 25.0% |
| ! | CCTTCAATTCATTTAATTGT+CGG | - | chr2_3:20330508-20330527 | Msa0283270:CDS | 25.0% |
| ! | CTTCAATTCATTTAATTGTC+GGG | - | chr2_3:20330509-20330528 | Msa0283270:CDS | 25.0% |
| ! | TAAAAAATTATACAGCACTC+AGG | + | chr2_3:20330587-20330606 | None:intergenic | 25.0% |
| !!! | AGATTTTTGGTAGTTGAAGA+AGG | + | chr2_3:20326477-20326496 | None:intergenic | 30.0% |
| GAGTTCAATTGCATCAAAAT+GGG | + | chr2_3:20326753-20326772 | None:intergenic | 30.0% | |
| TGAGTTCAATTGCATCAAAA+TGG | + | chr2_3:20326754-20326773 | None:intergenic | 30.0% | |
| TAGGTTGTTAGCACATAAAA+TGG | + | chr2_3:20326886-20326905 | None:intergenic | 30.0% | |
| TTTAATGTAATCACGTGTCA+TGG | + | chr2_3:20327110-20327129 | None:intergenic | 30.0% | |
| CAAGCACAAAATGTGTAAAA+AGG | + | chr2_3:20327302-20327321 | None:intergenic | 30.0% | |
| TGAATTCATGTGTTAAATGG+TGG | - | chr2_3:20327374-20327393 | Msa0283270:CDS | 30.0% | |
| TGTCTATCAAAAGGATTAAC+AGG | + | chr2_3:20327572-20327591 | None:intergenic | 30.0% | |
| ATCACTAAGTTTCACATACA+AGG | + | chr2_3:20327728-20327747 | None:intergenic | 30.0% | |
| TTTATACCTTTATATAGGCC+CGG | - | chr2_3:20327830-20327849 | Msa0283270:CDS | 30.0% | |
| GAAATAAAGTGAAAACAACG+TGG | + | chr2_3:20328077-20328096 | None:intergenic | 30.0% | |
| TAGAAATATCATGGTCTGTT+TGG | + | chr2_3:20328216-20328235 | None:intergenic | 30.0% | |
| AAACAGACCATGATATTTCT+AGG | - | chr2_3:20328215-20328234 | Msa0283270:intron | 30.0% | |
| TGAAAGTCCTAGAAATATCA+TGG | + | chr2_3:20328225-20328244 | None:intergenic | 30.0% | |
| ! | TAGGACTTTCAATATTGACT+GGG | - | chr2_3:20328234-20328253 | Msa0283270:intron | 30.0% |
| CAATGGTTATTGTGCTTATT+TGG | - | chr2_3:20328261-20328280 | Msa0283270:intron | 30.0% | |
| !! | TGTCAGACATAATGGTTTTA+TGG | - | chr2_3:20328378-20328397 | Msa0283270:intron | 30.0% |
| ! | TCACATGATGACTTCTAAAA+GGG | - | chr2_3:20328613-20328632 | Msa0283270:intron | 30.0% |
| ATTTATTACATACTCTGTCC+AGG | + | chr2_3:20328684-20328703 | None:intergenic | 30.0% | |
| TCTAAGCATTCAAGGAAAAT+TGG | - | chr2_3:20328739-20328758 | Msa0283270:intron | 30.0% | |
| TGATCATATAAGAATGCCTA+AGG | + | chr2_3:20328820-20328839 | None:intergenic | 30.0% | |
| GAAGTTCTTTGTTACATCAT+TGG | - | chr2_3:20328871-20328890 | Msa0283270:intron | 30.0% | |
| !!! | AATGCTTTTTTTTAACTGGG+TGG | - | chr2_3:20329073-20329092 | Msa0283270:intron | 30.0% |
| ! | ATCTTTTTGTTCAACCAAGA+TGG | - | chr2_3:20329266-20329285 | Msa0283270:intron | 30.0% |
| CAAGAACAGCGAATAAAATA+AGG | + | chr2_3:20329313-20329332 | None:intergenic | 30.0% | |
| ! | CTTTTATTACCAATGTTTCC+CGG | + | chr2_3:20329794-20329813 | None:intergenic | 30.0% |
| ! | AGTTCCATGTATTTGAAACA+GGG | + | chr2_3:20329900-20329919 | None:intergenic | 30.0% |
| TAAGTCAATCCATATGATTG+TGG | + | chr2_3:20330180-20330199 | None:intergenic | 30.0% | |
| CTATACACCTTATCATATTC+GGG | + | chr2_3:20330242-20330261 | None:intergenic | 30.0% | |
| GCTATACACCTTATCATATT+CGG | + | chr2_3:20330243-20330262 | None:intergenic | 30.0% | |
| ! | GAAGTAATTTGTACTTCAGA+GGG | - | chr2_3:20330415-20330434 | Msa0283270:intron | 30.0% |
| ! | AAGTAATTTGTACTTCAGAG+GGG | - | chr2_3:20330416-20330435 | Msa0283270:intron | 30.0% |
| CCGACAATTAAATGAATTGA+AGG | + | chr2_3:20330511-20330530 | None:intergenic | 30.0% | |
| ATTGCAAAAACTACCTGAGA+TGG | + | chr2_3:20326652-20326671 | None:intergenic | 35.0% | |
| ! | CAAAATGGGTATCGTGAATT+GGG | + | chr2_3:20326739-20326758 | None:intergenic | 35.0% |
| ! | TCAAAATGGGTATCGTGAAT+TGG | + | chr2_3:20326740-20326759 | None:intergenic | 35.0% |
| ATGCAATTGAACTCAAGCTA+GGG | - | chr2_3:20326759-20326778 | Msa0283270:three_prime_UTR | 35.0% | |
| ! | AACATTTGGTAATATCCAGC+CGG | + | chr2_3:20327461-20327480 | None:intergenic | 35.0% |
| GGATATTACCAAATGTTTCC+TGG | - | chr2_3:20327464-20327483 | Msa0283270:CDS | 35.0% | |
| ! | CCTTTTGATAGACATGTTAC+CGG | - | chr2_3:20327578-20327597 | Msa0283270:intron | 35.0% |
| AAATAGAAAGCCACTTACGT+AGG | + | chr2_3:20327644-20327663 | None:intergenic | 35.0% | |
| TTAGTGATAGCACGATTTAG+AGG | - | chr2_3:20327740-20327759 | Msa0283270:intron | 35.0% | |
| GTTTAAACTGTGCTATAACC+GGG | + | chr2_3:20327851-20327870 | None:intergenic | 35.0% | |
| CGTTTAAACTGTGCTATAAC+CGG | + | chr2_3:20327852-20327871 | None:intergenic | 35.0% | |
| CGGTTATAGCACAGTTTAAA+CGG | - | chr2_3:20327850-20327869 | Msa0283270:CDS | 35.0% | |
| ! | GTTCCATACTATGTTTCTGT+CGG | - | chr2_3:20327969-20327988 | Msa0283270:intron | 35.0% |
| ! | TTCCATACTATGTTTCTGTC+GGG | - | chr2_3:20327970-20327989 | Msa0283270:intron | 35.0% |
| !!! | CTGAACAAACTTTTGAGATC+GGG | + | chr2_3:20328099-20328118 | None:intergenic | 35.0% |
| !!! | CCTGAACAAACTTTTGAGAT+CGG | + | chr2_3:20328100-20328119 | None:intergenic | 35.0% |
| CTAGGACTTTCAATATTGAC+TGG | - | chr2_3:20328233-20328252 | Msa0283270:intron | 35.0% | |
| ! | AATATTGACTGGGTCAACAA+TGG | - | chr2_3:20328244-20328263 | Msa0283270:intron | 35.0% |
| ATGTGACAAAGGAGGTTTAA+TGG | - | chr2_3:20328347-20328366 | Msa0283270:intron | 35.0% | |
| AAACCATTATGTCTGACAAG+TGG | + | chr2_3:20328376-20328395 | None:intergenic | 35.0% | |
| !!! | CAGACATAATGGTTTTATGG+TGG | - | chr2_3:20328381-20328400 | Msa0283270:intron | 35.0% |
| ! | GTTTTATGGTGGCATCAAAA+TGG | - | chr2_3:20328392-20328411 | Msa0283270:intron | 35.0% |
| AAGTTGCAAAAGCTAGACAT+AGG | - | chr2_3:20328584-20328603 | Msa0283270:intron | 35.0% | |
| CTCACATGATGACTTCTAAA+AGG | - | chr2_3:20328612-20328631 | Msa0283270:intron | 35.0% | |
| ! | CACATGATGACTTCTAAAAG+GGG | - | chr2_3:20328614-20328633 | Msa0283270:intron | 35.0% |
| CATAAACCTAAGGATGTGTT+AGG | - | chr2_3:20328637-20328656 | Msa0283270:intron | 35.0% | |
| ATTCAGCATCTAAGCATTCA+AGG | - | chr2_3:20328731-20328750 | Msa0283270:intron | 35.0% | |
| ! | TTTGCTACTTATGTTGAAGC+TGG | - | chr2_3:20329235-20329254 | Msa0283270:intron | 35.0% |
| ATGTGTTACAGATACCAAAC+TGG | - | chr2_3:20329579-20329598 | Msa0283270:CDS | 35.0% | |
| TGTGAAAGCCATCTTACAAT+CGG | + | chr2_3:20329615-20329634 | None:intergenic | 35.0% | |
| GTTTCCCTGTTTCAAATACA+TGG | - | chr2_3:20329893-20329912 | Msa0283270:intron | 35.0% | |
| ! | CAGTTCCATGTATTTGAAAC+AGG | + | chr2_3:20329901-20329920 | None:intergenic | 35.0% |
| CTGTTTCAAATACATGGAAC+TGG | - | chr2_3:20329899-20329918 | Msa0283270:intron | 35.0% | |
| TTGTCATTAACTATTGGCAG+AGG | - | chr2_3:20329982-20330001 | Msa0283270:intron | 35.0% | |
| TGTCATTAACTATTGGCAGA+GGG | - | chr2_3:20329983-20330002 | Msa0283270:intron | 35.0% | |
| ! | GAGATCCAGATGATTGTTTT+TGG | - | chr2_3:20330127-20330146 | Msa0283270:intron | 35.0% |
| TCCAGCAGAAAACAAAACTA+TGG | - | chr2_3:20330313-20330332 | Msa0283270:intron | 35.0% | |
| !!! | ACCATAGTTTTGTTTTCTGC+TGG | + | chr2_3:20330317-20330336 | None:intergenic | 35.0% |
| ! | AACAGTTTTTATGGCTTCCA+GGG | - | chr2_3:20330386-20330405 | Msa0283270:intron | 35.0% |
| ! | GGAAGTAATTTGTACTTCAG+AGG | - | chr2_3:20330414-20330433 | Msa0283270:intron | 35.0% |
| TTTAATTGTCGGGAGTTTGT+CGG | - | chr2_3:20330519-20330538 | Msa0283270:exon | 35.0% | |
| TTTCTGCAAAACATGAGCTA+TGG | - | chr2_3:20330619-20330638 | Msa0283270:five_prime_UTR | 35.0% | |
| TAGGCATGAAACTTGCGTAA+CGG | + | chr2_3:20326692-20326711 | None:intergenic | 40.0% | |
| GATGCAATTGAACTCAAGCT+AGG | - | chr2_3:20326758-20326777 | Msa0283270:three_prime_UTR | 40.0% | |
| AATGTAATCACGTGTCATGG+TGG | + | chr2_3:20327107-20327126 | None:intergenic | 40.0% | |
| TGTCAATGCTTCACAATACG+TGG | - | chr2_3:20327196-20327215 | Msa0283270:intron | 40.0% | |
| GGGTATAAAATAAAGGTCCG+TGG | + | chr2_3:20327281-20327300 | None:intergenic | 40.0% | |
| CTTCTGTGTATTGTAGTCTC+AGG | - | chr2_3:20327406-20327425 | Msa0283270:CDS | 40.0% | |
| CCGGTAACATGTCTATCAAA+AGG | + | chr2_3:20327581-20327600 | None:intergenic | 40.0% | |
| !! | AATGGAATCAGGGTGTTGTA+TGG | + | chr2_3:20327608-20327627 | None:intergenic | 40.0% |
| CTATAACCGGGCCTATATAA+AGG | + | chr2_3:20327839-20327858 | None:intergenic | 40.0% | |
| ! | TCCATACTATGTTTCTGTCG+GGG | - | chr2_3:20327971-20327990 | Msa0283270:intron | 40.0% |
| TTCTCAAACCAAACAGACTC+TGG | + | chr2_3:20328005-20328024 | None:intergenic | 40.0% | |
| ! | CCGATCTCAAAAGTTTGTTC+AGG | - | chr2_3:20328097-20328116 | Msa0283270:intron | 40.0% |
| CAACTGCTAGAATGTGACAA+AGG | - | chr2_3:20328336-20328355 | Msa0283270:intron | 40.0% | |
| ! | CTAAAAGGGGCATAAACCTA+AGG | - | chr2_3:20328627-20328646 | Msa0283270:intron | 40.0% |
| ACCTAAGGATGTGTTAGGTA+CGG | - | chr2_3:20328642-20328661 | Msa0283270:intron | 40.0% | |
| !!! | GGGACTGTTTTAAGTTTTCC+TGG | - | chr2_3:20328663-20328682 | Msa0283270:intron | 40.0% |
| ! | GTGCATATGAGTTGAACACA+CGG | + | chr2_3:20328938-20328957 | None:intergenic | 40.0% |
| GGGTGGTCATATTTATCAGT+AGG | - | chr2_3:20329090-20329109 | Msa0283270:intron | 40.0% | |
| CTTACAACAACTTGTCTCTG+AGG | + | chr2_3:20329188-20329207 | None:intergenic | 40.0% | |
| CTCAGAGACAAGTTGTTGTA+AGG | - | chr2_3:20329186-20329205 | Msa0283270:intron | 40.0% | |
| TGTTCAACCAAGATGGATCA+AGG | - | chr2_3:20329273-20329292 | Msa0283270:intron | 40.0% | |
| ATGCGTGATTGTCACATATC+AGG | - | chr2_3:20329393-20329412 | Msa0283270:intron | 40.0% | |
| CACATATCAGGTCTCAAACT+CGG | - | chr2_3:20329405-20329424 | Msa0283270:intron | 40.0% | |
| ACATATCAGGTCTCAAACTC+GGG | - | chr2_3:20329406-20329425 | Msa0283270:intron | 40.0% | |
| AGTAAGCAAATCATACCTGC+TGG | + | chr2_3:20329735-20329754 | None:intergenic | 40.0% | |
| !! | GAGTTTGCAGTTGTTTCTGT+TGG | - | chr2_3:20329768-20329787 | Msa0283270:intron | 40.0% |
| ! | ACATGGAACTGGTTTCTCTA+TGG | - | chr2_3:20329910-20329929 | Msa0283270:intron | 40.0% |
| CATTCTCATTCTCGATTGCA+CGG | + | chr2_3:20330054-20330073 | None:intergenic | 40.0% | |
| GTGACAGCATACCAGAAAAT+AGG | - | chr2_3:20330206-20330225 | Msa0283270:intron | 40.0% | |
| AGCATACCAGAAAATAGGAG+AGG | - | chr2_3:20330211-20330230 | Msa0283270:intron | 40.0% | |
| GCATACCAGAAAATAGGAGA+GGG | - | chr2_3:20330212-20330231 | Msa0283270:intron | 40.0% | |
| ! | GAAAACCCTCTCCTATTTTC+TGG | + | chr2_3:20330220-20330239 | None:intergenic | 40.0% |
| ! | GGGTTTTCCCGAATATGATA+AGG | - | chr2_3:20330232-20330251 | Msa0283270:intron | 40.0% |
| ! | GAACAGTTTTTATGGCTTCC+AGG | - | chr2_3:20330385-20330404 | Msa0283270:intron | 40.0% |
| CAATCATAAACAGACACCAG+GGG | + | chr2_3:20330456-20330475 | None:intergenic | 40.0% | |
| CCAATCATAAACAGACACCA+GGG | + | chr2_3:20330457-20330476 | None:intergenic | 40.0% | |
| ACCAATCATAAACAGACACC+AGG | + | chr2_3:20330458-20330477 | None:intergenic | 40.0% | |
| TGAAGTAAACGGCACCGTTT+CGG | + | chr2_3:20326584-20326603 | None:intergenic | 45.0% | |
| GGGAGAGGTTGTGAAGTAAA+CGG | + | chr2_3:20326595-20326614 | None:intergenic | 45.0% | |
| GATTTCTGCGAAGAGGAAGA+AGG | + | chr2_3:20326619-20326638 | None:intergenic | 45.0% | |
| ACTACCTGAGATGGATCTTG+TGG | + | chr2_3:20326643-20326662 | None:intergenic | 45.0% | |
| !!! | AGGGTTTTAAATAGAGGGCG+CGG | - | chr2_3:20326976-20326995 | Msa0283270:CDS | 45.0% |
| CCGGCAAATTGGAAAATGTC+GGG | + | chr2_3:20327433-20327452 | None:intergenic | 45.0% | |
| ! | CCCGACATTTTCCAATTTGC+CGG | - | chr2_3:20327430-20327449 | Msa0283270:CDS | 45.0% |
| GCCGGCAAATTGGAAAATGT+CGG | + | chr2_3:20327434-20327453 | None:intergenic | 45.0% | |
| ! | TTGGTAATATCCAGCCGGAT+AGG | + | chr2_3:20327456-20327475 | None:intergenic | 45.0% |
| GGTGCATACCAGGAAACATT+TGG | + | chr2_3:20327475-20327494 | None:intergenic | 45.0% | |
| TCAACCCTGGAATCAATGCA+GGG | + | chr2_3:20327496-20327515 | None:intergenic | 45.0% | |
| ! | GTTGACTCCACCACAAATTG+AGG | - | chr2_3:20327511-20327530 | Msa0283270:intron | 45.0% |
| TTCGCAGGTTCCTCAATTTG+TGG | + | chr2_3:20327524-20327543 | None:intergenic | 45.0% | |
| GCGGTAAGTCAATGGAATCA+GGG | + | chr2_3:20327618-20327637 | None:intergenic | 45.0% | |
| TGCGGTAAGTCAATGGAATC+AGG | + | chr2_3:20327619-20327638 | None:intergenic | 45.0% | |
| ACCCCGACAGAAACATAGTA+TGG | + | chr2_3:20327975-20327994 | None:intergenic | 45.0% | |
| TGAACTGTCCAGAGTCTGTT+TGG | - | chr2_3:20327994-20328013 | Msa0283270:intron | 45.0% | |
| CTGCTAGAATGTGACAAAGG+AGG | - | chr2_3:20328339-20328358 | Msa0283270:intron | 45.0% | |
| ! | CTGCCACTTGTCAGACATAA+TGG | - | chr2_3:20328370-20328389 | Msa0283270:intron | 45.0% |
| GGATAACATGCTGCTAATGC+AGG | + | chr2_3:20328458-20328477 | None:intergenic | 45.0% | |
| CCTAAGGATGTGTTAGGTAC+GGG | - | chr2_3:20328643-20328662 | Msa0283270:intron | 45.0% | |
| TGGACCTGATTCTGATTTCC+TGG | - | chr2_3:20328759-20328778 | Msa0283270:intron | 45.0% | |
| GCTACCAGGAAATCAGAATC+AGG | + | chr2_3:20328766-20328785 | None:intergenic | 45.0% | |
| ! | CTCTGACACCGATTGTAAGA+TGG | - | chr2_3:20329604-20329623 | Msa0283270:CDS | 45.0% |
| CTGAAAATGTACCTCCTGCA+GGG | - | chr2_3:20329688-20329707 | Msa0283270:intron | 45.0% | |
| AAGCAAATCATACCTGCTGG+AGG | + | chr2_3:20329732-20329751 | None:intergenic | 45.0% | |
| !! | TTGCAGTTGTTTCTGTTGGC+CGG | - | chr2_3:20329772-20329791 | Msa0283270:intron | 45.0% |
| ! | GGAACTGGTTTCTCTATGGA+AGG | - | chr2_3:20329914-20329933 | Msa0283270:intron | 45.0% |
| ! | ATTACCAGGCTGGTTCTCAA+TGG | + | chr2_3:20330023-20330042 | None:intergenic | 45.0% |
| ATTGAGAACCAGCCTGGTAA+TGG | - | chr2_3:20330022-20330041 | Msa0283270:intron | 45.0% | |
| AATGAGAATGTCCCAGAAGC+TGG | - | chr2_3:20330064-20330083 | Msa0283270:intron | 45.0% | |
| TTTATCACTTCCCTGCTTCC+TGG | - | chr2_3:20330151-20330170 | Msa0283270:intron | 45.0% | |
| TTATCACTTCCCTGCTTCCT+GGG | - | chr2_3:20330152-20330171 | Msa0283270:intron | 45.0% | |
| TCCTGGGTTCCACAATCATA+TGG | - | chr2_3:20330168-20330187 | Msa0283270:intron | 45.0% | |
| TCCATATGATTGTGGAACCC+AGG | + | chr2_3:20330172-20330191 | None:intergenic | 45.0% | |
| CCCTGGTGTCTGTTTATGAT+TGG | - | chr2_3:20330454-20330473 | Msa0283270:CDS | 45.0% | |
| GTTCACTTACCCACTCTAGA+AGG | + | chr2_3:20330647-20330666 | None:intergenic | 45.0% | |
| GTGGGTAAGTGAACTGATAG+TGG | - | chr2_3:20330653-20330672 | Msa0283270:five_prime_UTR | 45.0% | |
| !! | TATGTAATAAATTAATTAAT+AGG | - | chr2_3:20328692-20328711 | Msa0283270:intron | 5.0% |
| AAGTAAACGGCACCGTTTCG+GGG | + | chr2_3:20326582-20326601 | None:intergenic | 50.0% | |
| GAAGTAAACGGCACCGTTTC+GGG | + | chr2_3:20326583-20326602 | None:intergenic | 50.0% | |
| TCTGCGAAGAGGAAGAAGGT+GGG | + | chr2_3:20326615-20326634 | None:intergenic | 50.0% | |
| TTCTGCGAAGAGGAAGAAGG+TGG | + | chr2_3:20326616-20326635 | None:intergenic | 50.0% | |
| TTGTGGCGATTTCTGCGAAG+AGG | + | chr2_3:20326626-20326645 | None:intergenic | 50.0% | |
| ATCGCCACAAGATCCATCTC+AGG | - | chr2_3:20326636-20326655 | Msa0283270:three_prime_UTR | 50.0% | |
| TTCCAATTTGCCGGCCTATC+CGG | - | chr2_3:20327439-20327458 | Msa0283270:CDS | 50.0% | |
| TAATATCCAGCCGGATAGGC+CGG | + | chr2_3:20327452-20327471 | None:intergenic | 50.0% | |
| ATCAATGCAGGGTGCATACC+AGG | + | chr2_3:20327485-20327504 | None:intergenic | 50.0% | |
| !! | ATGCACCCTGCATTGATTCC+AGG | - | chr2_3:20327488-20327507 | Msa0283270:intron | 50.0% |
| !! | TGCACCCTGCATTGATTCCA+GGG | - | chr2_3:20327489-20327508 | Msa0283270:intron | 50.0% |
| GTCAACCCTGGAATCAATGC+AGG | + | chr2_3:20327497-20327516 | None:intergenic | 50.0% | |
| ! | ATTTGTGGTGGAGTCAACCC+TGG | + | chr2_3:20327509-20327528 | None:intergenic | 50.0% |
| GCAGGTTCCTCAATTTGTGG+TGG | + | chr2_3:20327521-20327540 | None:intergenic | 50.0% | |
| CAGCATATAAGCCAGCTCCA+CGG | + | chr2_3:20327547-20327566 | None:intergenic | 50.0% | |
| !! | CAGGGTGTTGTATGGAAGTC+CGG | + | chr2_3:20327600-20327619 | None:intergenic | 50.0% |
| GTAGGTGTGCGGTAAGTCAA+TGG | + | chr2_3:20327626-20327645 | None:intergenic | 50.0% | |
| TTACCGCACACCTACGTAAG+TGG | - | chr2_3:20327631-20327650 | Msa0283270:intron | 50.0% | |
| AAGCCACTTACGTAGGTGTG+CGG | + | chr2_3:20327637-20327656 | None:intergenic | 50.0% | |
| CCCGTACCTAACACATCCTT+AGG | + | chr2_3:20328646-20328665 | None:intergenic | 50.0% | |
| ! | TGGTCTTGGGGGTAAACCTT+AGG | - | chr2_3:20328801-20328820 | Msa0283270:intron | 50.0% |
| ! | CATGCTCTGAATGGCACTAG+TGG | + | chr2_3:20328914-20328933 | None:intergenic | 50.0% |
| ! | ACACACGGTCATGCTCTGAA+TGG | + | chr2_3:20328923-20328942 | None:intergenic | 50.0% |
| ! | TGCTTGCCCCTGATTTTCAC+CGG | + | chr2_3:20329138-20329157 | None:intergenic | 50.0% |
| !! | ACAACTTGTCTCTGAGGTGC+AGG | + | chr2_3:20329182-20329201 | None:intergenic | 50.0% |
| ACCAAGATGGATCAAGGCAG+AGG | - | chr2_3:20329279-20329298 | Msa0283270:intron | 50.0% | |
| !! | AGGAGGTACATTTTCAGCCC+TGG | + | chr2_3:20329685-20329704 | None:intergenic | 50.0% |
| GCTGAAAATGTACCTCCTGC+AGG | - | chr2_3:20329687-20329706 | Msa0283270:intron | 50.0% | |
| !! | TGCAGTTGTTTCTGTTGGCC+GGG | - | chr2_3:20329773-20329792 | Msa0283270:intron | 50.0% |
| TTCTGTTGGCCGGGAAACAT+TGG | - | chr2_3:20329782-20329801 | Msa0283270:intron | 50.0% | |
| ACAGGGAAACCCATCCCAAA+AGG | + | chr2_3:20329883-20329902 | None:intergenic | 50.0% | |
| TGGTTCTCAATGGCAGCATC+AGG | + | chr2_3:20330013-20330032 | None:intergenic | 50.0% | |
| ATTGTGGAACCCAGGAAGCA+GGG | + | chr2_3:20330164-20330183 | None:intergenic | 50.0% | |
| ! | TTTTATGGCTTCCAGGGCAC+AGG | - | chr2_3:20330392-20330411 | Msa0283270:intron | 50.0% |
| TTTATGGCTTCCAGGGCACA+GGG | - | chr2_3:20330393-20330412 | Msa0283270:intron | 50.0% | |
| CAAATTACTTCCCTGTGCCC+TGG | + | chr2_3:20330406-20330425 | None:intergenic | 50.0% | |
| TCATAAACAGACACCAGGGG+TGG | + | chr2_3:20330453-20330472 | None:intergenic | 50.0% | |
| AATTGTCGGGAGTTTGTCGG+CGG | - | chr2_3:20330522-20330541 | Msa0283270:exon | 50.0% | |
| ! | AGCTATGGTGCCTTCTAGAG+TGG | - | chr2_3:20330634-20330653 | Msa0283270:five_prime_UTR | 50.0% |
| !! | GCTATGGTGCCTTCTAGAGT+GGG | - | chr2_3:20330635-20330654 | Msa0283270:five_prime_UTR | 50.0% |
| AGTAAACGGCACCGTTTCGG+GGG | + | chr2_3:20326581-20326600 | None:intergenic | 55.0% | |
| GAAGAGGAAGAAGGTGGGAG+AGG | + | chr2_3:20326610-20326629 | None:intergenic | 55.0% | |
| GATGCAGCCTCATTCCTCGT+GGG | - | chr2_3:20327057-20327076 | Msa0283270:CDS | 55.0% | |
| ! | TGGTGTCAGTGTCAGACACG+TGG | + | chr2_3:20327087-20327106 | None:intergenic | 55.0% |
| TGTGGCGCAAATCGCATCCA+CGG | - | chr2_3:20327261-20327280 | Msa0283270:intron | 55.0% | |
| ATTGAGGAACCTGCGAACCG+TGG | - | chr2_3:20327527-20327546 | Msa0283270:intron | 55.0% | |
| !! | GCACAGCTCGTGTTGGTCTT+GGG | - | chr2_3:20328788-20328807 | Msa0283270:intron | 55.0% |
| !! | CACAGCTCGTGTTGGTCTTG+GGG | - | chr2_3:20328789-20328808 | Msa0283270:intron | 55.0% |
| !! | ACAGCTCGTGTTGGTCTTGG+GGG | - | chr2_3:20328790-20328809 | Msa0283270:intron | 55.0% |
| GCAGCAGCAGCTTCAGAAGT+TGG | + | chr2_3:20329116-20329135 | None:intergenic | 55.0% | |
| !! | ACTTCTGAAGCTGCTGCTGC+CGG | - | chr2_3:20329116-20329135 | Msa0283270:intron | 55.0% |
| TGCTGCTGCCGGTGAAAATC+AGG | - | chr2_3:20329127-20329146 | Msa0283270:intron | 55.0% | |
| GCTGCTGCCGGTGAAAATCA+GGG | - | chr2_3:20329128-20329147 | Msa0283270:intron | 55.0% | |
| CTGCTGCCGGTGAAAATCAG+GGG | - | chr2_3:20329129-20329148 | Msa0283270:intron | 55.0% | |
| GCCTCTGCCTTGATCCATCT+TGG | + | chr2_3:20329283-20329302 | None:intergenic | 55.0% | |
| !! | TCGGTGTCAGAGCTCCAGTT+TGG | + | chr2_3:20329596-20329615 | None:intergenic | 55.0% |
| ! | ACATTTTCAGCCCTGGCTGC+AGG | + | chr2_3:20329678-20329697 | None:intergenic | 55.0% |
| AAATGTACCTCCTGCAGGGC+AGG | - | chr2_3:20329692-20329711 | Msa0283270:intron | 55.0% | |
| ! | CATACCTGCTGGAGGAGCAT+TGG | + | chr2_3:20329724-20329743 | None:intergenic | 55.0% |
| AATGTCCCAGAAGCTGGCAG+AGG | - | chr2_3:20330070-20330089 | Msa0283270:intron | 55.0% | |
| CATTGCCTCTGCCAGCTTCT+GGG | + | chr2_3:20330078-20330097 | None:intergenic | 55.0% | |
| CAATGGTGGCAACCAGTGGT+GGG | - | chr2_3:20330093-20330112 | Msa0283270:intron | 55.0% | |
| AATGGTGGCAACCAGTGGTG+GGG | - | chr2_3:20330094-20330113 | Msa0283270:intron | 55.0% | |
| CCTTTACAATGCCCCACCAC+TGG | + | chr2_3:20330108-20330127 | None:intergenic | 55.0% | |
| !! | CCAGTGGTGGGGCATTGTAA+AGG | - | chr2_3:20330105-20330124 | Msa0283270:intron | 55.0% |
| GATTGTGGAACCCAGGAAGC+AGG | + | chr2_3:20330165-20330184 | None:intergenic | 55.0% | |
| GGCAGTTGTTAATCCACCCC+TGG | - | chr2_3:20330437-20330456 | Msa0283270:intron | 55.0% | |
| GGCAGAAAACGCCCCCGAAA+CGG | - | chr2_3:20326567-20326586 | Msa0283270:three_prime_UTR | 60.0% | |
| CGATGCAGCCTCATTCCTCG+TGG | - | chr2_3:20327056-20327075 | Msa0283270:CDS | 60.0% | |
| AGCCGGATAGGCCGGCAAAT+TGG | + | chr2_3:20327444-20327463 | None:intergenic | 60.0% | |
| AATTTGCCGGCCTATCCGGC+TGG | - | chr2_3:20327443-20327462 | Msa0283270:CDS | 60.0% | |
| GTAGCACGCACAGCTCGTGT+TGG | - | chr2_3:20328781-20328800 | Msa0283270:intron | 60.0% | |
| ! | CGCACAGCTCGTGTTGGTCT+TGG | - | chr2_3:20328787-20328806 | Msa0283270:intron | 60.0% |
| TCCACCAAGACCTGCAGCCA+GGG | - | chr2_3:20329665-20329684 | Msa0283270:intron | 60.0% | |
| GTTGCCAATGCTCCTCCAGC+AGG | - | chr2_3:20329717-20329736 | Msa0283270:intron | 60.0% | |
| GCTGCCATTGAGAACCAGCC+TGG | - | chr2_3:20330016-20330035 | Msa0283270:intron | 60.0% | |
| GGTCTGCACCATTACCAGGC+TGG | + | chr2_3:20330033-20330052 | None:intergenic | 60.0% | |
| GCACGGTCTGCACCATTACC+AGG | + | chr2_3:20330037-20330056 | None:intergenic | 60.0% | |
| CCATTGCCTCTGCCAGCTTC+TGG | + | chr2_3:20330079-20330098 | None:intergenic | 60.0% | |
| CCAGAAGCTGGCAGAGGCAA+TGG | - | chr2_3:20330076-20330095 | Msa0283270:intron | 60.0% | |
| GAAGCTGGCAGAGGCAATGG+TGG | - | chr2_3:20330079-20330098 | Msa0283270:intron | 60.0% | |
| GAGGCAATGGTGGCAACCAG+TGG | - | chr2_3:20330089-20330108 | Msa0283270:intron | 60.0% | |
| GCAATGGTGGCAACCAGTGG+TGG | - | chr2_3:20330092-20330111 | Msa0283270:intron | 60.0% | |
| GGGCGCGGTAACGATTGCAG+TGG | - | chr2_3:20326991-20327010 | Msa0283270:CDS | 65.0% | |
| TGGCACGCCCACGAGGAATG+AGG | + | chr2_3:20327067-20327086 | None:intergenic | 65.0% | |
| GAACCTGCGAACCGTGGAGC+TGG | - | chr2_3:20327533-20327552 | Msa0283270:intron | 65.0% | |
| AAGCCAGCTCCACGGTTCGC+AGG | + | chr2_3:20327539-20327558 | None:intergenic | 65.0% | |
| CACGAGCTGTGCGTGCTACC+AGG | + | chr2_3:20328780-20328799 | None:intergenic | 65.0% | |
| !! | CTCTGAGGTGCAGGCTGCTG+AGG | + | chr2_3:20329173-20329192 | None:intergenic | 65.0% |
| ! | GCAGGTCTTGGTGGACGAGG+AGG | + | chr2_3:20329660-20329679 | None:intergenic | 65.0% |
| ! | GCTGCAGGTCTTGGTGGACG+AGG | + | chr2_3:20329663-20329682 | None:intergenic | 65.0% |
| GTCCACCAAGACCTGCAGCC+AGG | - | chr2_3:20329664-20329683 | Msa0283270:intron | 65.0% | |
| TCAGCCCTGGCTGCAGGTCT+TGG | + | chr2_3:20329672-20329691 | None:intergenic | 65.0% | |
| TGTACCTCCTGCAGGGCAGG+TGG | - | chr2_3:20329695-20329714 | Msa0283270:intron | 65.0% | |
| TTGGCAACCACCTGCCCTGC+AGG | + | chr2_3:20329705-20329724 | None:intergenic | 65.0% | |
| AGACACGTGGCACGCCCACG+AGG | + | chr2_3:20327074-20327093 | None:intergenic | 70.0% | |
| GCCCTGGCTGCAGGTCTTGG+TGG | + | chr2_3:20329669-20329688 | None:intergenic | 70.0% | |
| GCAACCACCTGCCCTGCAGG+AGG | + | chr2_3:20329702-20329721 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 20326419 | 20330676 | 20326419 | ID=Msa0283270;Name=Msa0283270 |
| chr2_3 | mRNA | 20326419 | 20330676 | 20326419 | ID=Msa0283270-mRNA-1;Parent=Msa0283270;Name=Msa0283270-mRNA-1;_AED=0.06;_eAED=0.06;_QI=146|1|1|1|1|1|5|481|296 |
| chr2_3 | exon | 20326419 | 20327093 | 20326419 | ID=Msa0283270-mRNA-1:exon:8001;Parent=Msa0283270-mRNA-1 |
| chr2_3 | exon | 20327357 | 20327505 | 20327357 | ID=Msa0283270-mRNA-1:exon:8000;Parent=Msa0283270-mRNA-1 |
| chr2_3 | exon | 20327756 | 20327986 | 20327756 | ID=Msa0283270-mRNA-1:exon:7999;Parent=Msa0283270-mRNA-1 |
| chr2_3 | exon | 20329450 | 20329673 | 20329450 | ID=Msa0283270-mRNA-1:exon:7998;Parent=Msa0283270-mRNA-1 |
| chr2_3 | exon | 20330438 | 20330676 | 20330438 | ID=Msa0283270-mRNA-1:exon:7997;Parent=Msa0283270-mRNA-1 |
| chr2_3 | five_prime_UTR | 20330531 | 20330676 | 20330531 | ID=Msa0283270-mRNA-1:five_prime_utr;Parent=Msa0283270-mRNA-1 |
| chr2_3 | CDS | 20330438 | 20330530 | 20330438 | ID=Msa0283270-mRNA-1:cds;Parent=Msa0283270-mRNA-1 |
| chr2_3 | CDS | 20329450 | 20329673 | 20329450 | ID=Msa0283270-mRNA-1:cds;Parent=Msa0283270-mRNA-1 |
| chr2_3 | CDS | 20327756 | 20327986 | 20327756 | ID=Msa0283270-mRNA-1:cds;Parent=Msa0283270-mRNA-1 |
| chr2_3 | CDS | 20327357 | 20327505 | 20327357 | ID=Msa0283270-mRNA-1:cds;Parent=Msa0283270-mRNA-1 |
| chr2_3 | CDS | 20326900 | 20327093 | 20326900 | ID=Msa0283270-mRNA-1:cds;Parent=Msa0283270-mRNA-1 |
| chr2_3 | three_prime_UTR | 20326419 | 20326899 | 20326419 | ID=Msa0283270-mRNA-1:three_prime_utr;Parent=Msa0283270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
