AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0283570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283570 MtrunA17_Chr2g0298661 97.315 298 5 3 1 296 1 297 0.0 566
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283570 AT4G29960.1 62.182 275 85 7 25 293 28 289 1.26e-97 289

Find 136 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTGCCTCTGCCAGCTTC+TGG 0.083546 2_3:-20857920 None:intergenic
GAAGTAAACGGCACCGTTTC+GGG 0.177318 2_3:-20854424 None:intergenic
TTTATCACTTCCCTGCTTCC+TGG 0.205047 2_3:+20857995 Msa0283570:CDS
GTAGTTTGATTGATAAATTT+AGG 0.230333 2_3:-20854385 None:intergenic
TGCTGCTGCCGGTGAAAATC+AGG 0.245689 2_3:+20856971 Msa0283570:CDS
GCTATACACCTTATCATATT+CGG 0.263262 2_3:-20858084 None:intergenic
TCAGCCCTGGCTGCAGGTCT+TGG 0.293292 2_3:-20857513 None:intergenic
TAGTTTGATTGATAAATTTA+GGG 0.301230 2_3:-20854384 None:intergenic
CATTGCCTCTGCCAGCTTCT+GGG 0.309185 2_3:-20857919 None:intergenic
AACTATGGTGATAATTTATA+AGG 0.311191 2_3:+20858172 Msa0283570:three_prime_UTR
GTCATAACTAATACATATTT+AGG 0.314953 2_3:+20858123 Msa0283570:three_prime_UTR
ATGCACCCTGCATTGATTCC+AGG 0.344373 2_3:+20855332 Msa0283570:CDS
CTATACACCTTATCATATTC+GGG 0.352459 2_3:-20858083 None:intergenic
TTCCAATTTGCCGGCCTATC+CGG 0.357512 2_3:+20855283 Msa0283570:CDS
TGCGGTAAGTCAATGGAATC+AGG 0.360834 2_3:-20855460 None:intergenic
CAAGAACAGCGAATAAAATA+AGG 0.361508 2_3:-20857154 None:intergenic
GAAATGAAAATTTAACTCAT+TGG 0.365391 2_3:-20854294 None:intergenic
TGTCTATCAAAAGGATTAAC+AGG 0.366467 2_3:-20855413 None:intergenic
TGAAGTAAACGGCACCGTTT+CGG 0.367186 2_3:-20854425 None:intergenic
AGCCGGATAGGCCGGCAAAT+TGG 0.371911 2_3:-20855285 None:intergenic
CTTCAATTCATTTAATTGTC+GGG 0.378946 2_3:+20858353 Msa0283570:three_prime_UTR
GTGACAGCATACCAGAAAAT+AGG 0.391212 2_3:+20858050 Msa0283570:three_prime_UTR
GGATATTACCAAATGTTTCC+TGG 0.393625 2_3:+20855308 Msa0283570:CDS
GCCTCTGCCTTGATCCATCT+TGG 0.399332 2_3:-20857124 None:intergenic
CCCTGGTGTCTGTTTATGAT+TGG 0.401189 2_3:+20858298 Msa0283570:three_prime_UTR
TCCTGGGTTCCACAATCATA+TGG 0.403844 2_3:+20858012 Msa0283570:CDS
AATTTAACTCATTGGATTTG+AGG 0.421789 2_3:-20854286 None:intergenic
TTGGCAACCACCTGCCCTGC+AGG 0.422864 2_3:-20857546 None:intergenic
GTCCACCAAGACCTGCAGCC+AGG 0.426345 2_3:+20857508 Msa0283570:CDS
TCCAGCAGAAAACAAAACTA+TGG 0.430644 2_3:+20858157 Msa0283570:three_prime_UTR
CCTTCAATTCATTTAATTGT+CGG 0.431451 2_3:+20858352 Msa0283570:three_prime_UTR
TTTAATTGTCGGGAGTTTGT+CGG 0.437137 2_3:+20858363 Msa0283570:three_prime_UTR
CCGACAATTAAATGAATTGA+AGG 0.437652 2_3:-20858352 None:intergenic
TTATCACTTCCCTGCTTCCT+GGG 0.438002 2_3:+20857996 Msa0283570:CDS
ACTTCTGAAGCTGCTGCTGC+CGG 0.440502 2_3:+20856960 Msa0283570:CDS
GAACCTGCGAACCGTGGAGC+TGG 0.451209 2_3:+20855377 Msa0283570:CDS
TGGTTCTCAATGGCAGCATC+AGG 0.451911 2_3:-20857854 None:intergenic
CTCTGAGGTGCAGGCTGCTG+AGG 0.452932 2_3:-20857014 None:intergenic
ATCAATGCAGGGTGCATACC+AGG 0.458389 2_3:-20855326 None:intergenic
AATGGAATCAGGGTGTTGTA+TGG 0.461274 2_3:-20855449 None:intergenic
GCCCTGGCTGCAGGTCTTGG+TGG 0.464321 2_3:-20857510 None:intergenic
GCAATGGTGGCAACCAGTGG+TGG 0.470017 2_3:+20857936 Msa0283570:CDS
TGTGAAAGCCATCTTACAAT+CGG 0.470728 2_3:-20857456 None:intergenic
CCGGTAACATGTCTATCAAA+AGG 0.474598 2_3:-20855422 None:intergenic
GATTGTGGAACCCAGGAAGC+AGG 0.475098 2_3:-20858006 None:intergenic
GCAGCAGCAGCTTCAGAAGT+TGG 0.476019 2_3:-20856957 None:intergenic
TTCGCAGGTTCCTCAATTTG+TGG 0.476969 2_3:-20855365 None:intergenic
GGTGCATACCAGGAAACATT+TGG 0.481967 2_3:-20855316 None:intergenic
AATTTGCCGGCCTATCCGGC+TGG 0.485860 2_3:+20855287 Msa0283570:CDS
CAGGGTGTTGTATGGAAGTC+CGG 0.489052 2_3:-20855441 None:intergenic
TGTTCAACCAAGATGGATCA+AGG 0.490896 2_3:+20857117 Msa0283570:CDS
CCAGAAGCTGGCAGAGGCAA+TGG 0.491181 2_3:+20857920 Msa0283570:CDS
GTTGCCAATGCTCCTCCAGC+AGG 0.493494 2_3:+20857561 Msa0283570:CDS
CTCAGAGACAAGTTGTTGTA+AGG 0.495844 2_3:+20857030 Msa0283570:CDS
AAATGTACCTCCTGCAGGGC+AGG 0.497728 2_3:+20857536 Msa0283570:CDS
GTTCACTTACCCACTCTAGA+AGG 0.501018 2_3:-20858488 None:intergenic
AATGAGAATGTCCCAGAAGC+TGG 0.502270 2_3:+20857908 Msa0283570:CDS
GCACGGTCTGCACCATTACC+AGG 0.502582 2_3:-20857878 None:intergenic
CAATGGTGGCAACCAGTGGT+GGG 0.503431 2_3:+20857937 Msa0283570:CDS
TGCACCCTGCATTGATTCCA+GGG 0.504551 2_3:+20855333 Msa0283570:CDS
TCCACCAAGACCTGCAGCCA+GGG 0.504594 2_3:+20857509 Msa0283570:CDS
GCTGAAAATGTACCTCCTGC+AGG 0.507702 2_3:+20857531 Msa0283570:CDS
CAAATTACTTCCCTGTGCCC+TGG 0.507886 2_3:-20858247 None:intergenic
GCTGCAGGTCTTGGTGGACG+AGG 0.508079 2_3:-20857504 None:intergenic
GTCAACCCTGGAATCAATGC+AGG 0.510845 2_3:-20855338 None:intergenic
CCGGCAAATTGGAAAATGTC+GGG 0.512491 2_3:-20855274 None:intergenic
GCTGCTGCCGGTGAAAATCA+GGG 0.513650 2_3:+20856972 Msa0283570:CDS
AAGCCAGCTCCACGGTTCGC+AGG 0.514593 2_3:-20855380 None:intergenic
GAAGTAATTTGTACTTCAGA+GGG 0.516768 2_3:+20858259 Msa0283570:three_prime_UTR
ACAACTTGTCTCTGAGGTGC+AGG 0.518547 2_3:-20857023 None:intergenic
CTCTGACACCGATTGTAAGA+TGG 0.519517 2_3:+20857448 Msa0283570:CDS
CCTTTACAATGCCCCACCAC+TGG 0.522720 2_3:-20857949 None:intergenic
TCGGTGTCAGAGCTCCAGTT+TGG 0.523774 2_3:-20857437 None:intergenic
ATGTGTTACAGATACCAAAC+TGG 0.523883 2_3:+20857423 Msa0283570:intron
TTTGCTACTTATGTTGAAGC+TGG 0.525091 2_3:+20857079 Msa0283570:CDS
GGCAGTTGTTAATCCACCCC+TGG 0.528965 2_3:+20858281 Msa0283570:three_prime_UTR
GTAGGTGTGCGGTAAGTCAA+TGG 0.530263 2_3:-20855467 None:intergenic
CATACCTGCTGGAGGAGCAT+TGG 0.530298 2_3:-20857565 None:intergenic
GGGAGAGGTTGTGAAGTAAA+CGG 0.536857 2_3:-20854436 None:intergenic
GTGGGTAAGTGAACTGATAG+TGG 0.538300 2_3:+20858497 Msa0283570:three_prime_UTR
CATTCTCATTCTCGATTGCA+CGG 0.538860 2_3:-20857895 None:intergenic
CCAGTGGTGGGGCATTGTAA+AGG 0.540989 2_3:+20857949 Msa0283570:CDS
GGAAGTAATTTGTACTTCAG+AGG 0.541496 2_3:+20858258 Msa0283570:three_prime_UTR
GTTGACTCCACCACAAATTG+AGG 0.541577 2_3:+20855355 Msa0283570:CDS
AATGGTGGCAACCAGTGGTG+GGG 0.541711 2_3:+20857938 Msa0283570:CDS
ATTGAGAACCAGCCTGGTAA+TGG 0.544812 2_3:+20857866 Msa0283570:CDS
TAATATCCAGCCGGATAGGC+CGG 0.549385 2_3:-20855293 None:intergenic
ATTACCAGGCTGGTTCTCAA+TGG 0.550682 2_3:-20857864 None:intergenic
AGCTATGGTGCCTTCTAGAG+TGG 0.554870 2_3:+20858478 Msa0283570:three_prime_UTR
TTGGTAATATCCAGCCGGAT+AGG 0.559088 2_3:-20855297 None:intergenic
ATCGCCACAAGATCCATCTC+AGG 0.560810 2_3:+20854480 Msa0283570:CDS
GCAGGTTCCTCAATTTGTGG+TGG 0.561832 2_3:-20855362 None:intergenic
ATTGTGGAACCCAGGAAGCA+GGG 0.566256 2_3:-20858005 None:intergenic
GAAGAGGAAGAAGGTGGGAG+AGG 0.566409 2_3:-20854451 None:intergenic
AACATTTGGTAATATCCAGC+CGG 0.568144 2_3:-20855302 None:intergenic
GCCGGCAAATTGGAAAATGT+CGG 0.569653 2_3:-20855275 None:intergenic
CTGCTGCCGGTGAAAATCAG+GGG 0.574488 2_3:+20856973 Msa0283570:CDS
ACCAAGATGGATCAAGGCAG+AGG 0.574890 2_3:+20857123 Msa0283570:CDS
ATTTGTGGTGGAGTCAACCC+TGG 0.577781 2_3:-20855350 None:intergenic
GAGGCAATGGTGGCAACCAG+TGG 0.581630 2_3:+20857933 Msa0283570:CDS
TTTCTGCAAAACATGAGCTA+TGG 0.581697 2_3:+20858463 Msa0283570:three_prime_UTR
AATGTCCCAGAAGCTGGCAG+AGG 0.582269 2_3:+20857914 Msa0283570:CDS
GAAGCTGGCAGAGGCAATGG+TGG 0.582333 2_3:+20857923 Msa0283570:CDS
GATTTCTGCGAAGAGGAAGA+AGG 0.583027 2_3:-20854460 None:intergenic
TCCATATGATTGTGGAACCC+AGG 0.583039 2_3:-20858013 None:intergenic
CTGAAAATGTACCTCCTGCA+GGG 0.583817 2_3:+20857532 Msa0283570:CDS
AAGTAAACGGCACCGTTTCG+GGG 0.585571 2_3:-20854423 None:intergenic
ACCAATCATAAACAGACACC+AGG 0.588818 2_3:-20858299 None:intergenic
TGTACCTCCTGCAGGGCAGG+TGG 0.590447 2_3:+20857539 Msa0283570:CDS
GCAACCACCTGCCCTGCAGG+AGG 0.610954 2_3:-20857543 None:intergenic
GCAGGTCTTGGTGGACGAGG+AGG 0.611372 2_3:-20857501 None:intergenic
GGTCTGCACCATTACCAGGC+TGG 0.611992 2_3:-20857874 None:intergenic
TTTATGGCTTCCAGGGCACA+GGG 0.614928 2_3:+20858237 Msa0283570:three_prime_UTR
ACTACCTGAGATGGATCTTG+TGG 0.615374 2_3:-20854484 None:intergenic
ATTTATCAATCAAACTACAA+TGG 0.620548 2_3:+20854390 Msa0283570:exon
GCTATGGTGCCTTCTAGAGT+GGG 0.623911 2_3:+20858479 Msa0283570:three_prime_UTR
GCTGCCATTGAGAACCAGCC+TGG 0.626238 2_3:+20857860 Msa0283570:CDS
TTCTGCGAAGAGGAAGAAGG+TGG 0.626579 2_3:-20854457 None:intergenic
TAAGTCAATCCATATGATTG+TGG 0.631095 2_3:-20858021 None:intergenic
TTGTGGCGATTTCTGCGAAG+AGG 0.631216 2_3:-20854467 None:intergenic
GCGGTAAGTCAATGGAATCA+GGG 0.639590 2_3:-20855459 None:intergenic
ATTGAGGAACCTGCGAACCG+TGG 0.639776 2_3:+20855371 Msa0283570:CDS
TCTGCGAAGAGGAAGAAGGT+GGG 0.642845 2_3:-20854456 None:intergenic
GCATACCAGAAAATAGGAGA+GGG 0.647009 2_3:+20858056 Msa0283570:three_prime_UTR
AGTAAACGGCACCGTTTCGG+GGG 0.647083 2_3:-20854422 None:intergenic
TCATAAACAGACACCAGGGG+TGG 0.659478 2_3:-20858294 None:intergenic
AGCATACCAGAAAATAGGAG+AGG 0.665811 2_3:+20858055 Msa0283570:three_prime_UTR
CTTACAACAACTTGTCTCTG+AGG 0.667166 2_3:-20857029 None:intergenic
CAGCATATAAGCCAGCTCCA+CGG 0.674149 2_3:-20855388 None:intergenic
TCAACCCTGGAATCAATGCA+GGG 0.679896 2_3:-20855337 None:intergenic
AAGCAAATCATACCTGCTGG+AGG 0.681082 2_3:-20857573 None:intergenic
AATTGTCGGGAGTTTGTCGG+CGG 0.695279 2_3:+20858366 Msa0283570:three_prime_UTR
AAGCCACTTACGTAGGTGTG+CGG 0.702356 2_3:-20855478 None:intergenic
CAATCATAAACAGACACCAG+GGG 0.720298 2_3:-20858297 None:intergenic
AAGTAATTTGTACTTCAGAG+GGG 0.729284 2_3:+20858260 Msa0283570:three_prime_UTR
CCAATCATAAACAGACACCA+GGG 0.734719 2_3:-20858298 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTATTATAAATACTAAAT+AGG + chr2_3:20854800-20854819 Msa0283570:intron 10.0%
!! GTTATTATAAATACTAAATA+GGG + chr2_3:20854801-20854820 Msa0283570:intron 10.0%
!! ATATATTTATACCTTTATAT+AGG + chr2_3:20855669-20855688 Msa0283570:intron 10.0%
!!! ATTTTAAACAATTCATTTTT+TGG + chr2_3:20856834-20856853 Msa0283570:intron 10.0%
!!! TTTTAAACAATTCATTTTTT+GGG + chr2_3:20856835-20856854 Msa0283570:intron 10.0%
!!! TGTATAATTTTTTAATTGAT+AGG + chr2_3:20858437-20858456 Msa0283570:three_prime_UTR 10.0%
!!! TTTTTTAGATTTGAGATTTT+TGG - chr2_3:20854334-20854353 None:intergenic 15.0%
!! TAGTTTGATTGATAAATTTA+GGG - chr2_3:20854387-20854406 None:intergenic 15.0%
!!! ATTGTTATTTGTTATTAAAG+AGG + chr2_3:20854859-20854878 Msa0283570:intron 15.0%
!!! TCATTTTATTAAATTATCAC+AGG + chr2_3:20854979-20854998 Msa0283570:intron 15.0%
!! GTAAACATATATATATATTG+TGG + chr2_3:20855087-20855106 Msa0283570:intron 15.0%
!! TGTCAAAATATAAAATAGAA+AGG + chr2_3:20856130-20856149 Msa0283570:intron 15.0%
!!! TTTTGGTATAATATTTGATT+AGG + chr2_3:20856331-20856350 Msa0283570:intron 15.0%
!!! TTTAACGTATTTAATTTTAG+TGG + chr2_3:20856870-20856889 Msa0283570:intron 15.0%
!! AATTGAATAGACAATAATAA+GGG - chr2_3:20857301-20857320 None:intergenic 15.0%
!! AAATTGAATAGACAATAATA+AGG - chr2_3:20857302-20857321 None:intergenic 15.0%
!! GAAATGAAAATTTAACTCAT+TGG - chr2_3:20854297-20854316 None:intergenic 20.0%
!! GTAGTTTGATTGATAAATTT+AGG - chr2_3:20854388-20854407 None:intergenic 20.0%
!! ATTTATCAATCAAACTACAA+TGG + chr2_3:20854390-20854409 Msa0283570:exon 20.0%
!! AATCAATTAAACGAACAATT+AGG - chr2_3:20854555-20854574 None:intergenic 20.0%
!! AATGGAAAAAAATTTCAAGA+TGG + chr2_3:20854693-20854712 Msa0283570:intron 20.0%
!! ATGGAAAAAAATTTCAAGAT+GGG + chr2_3:20854694-20854713 Msa0283570:intron 20.0%
!! ACACAAAAAAATGCTAAATT+AGG - chr2_3:20854749-20854768 None:intergenic 20.0%
!!! TAAATAGGGTTTTAAATAGA+GGG + chr2_3:20854815-20854834 Msa0283570:intron 20.0%
!!! GTAAAAAGGGTATAAAATAA+AGG - chr2_3:20855132-20855151 None:intergenic 20.0%
!!! AGCATATTTTATAGCTTTTT+TGG + chr2_3:20855635-20855654 Msa0283570:intron 20.0%
!!! ATTTTGTAACATGGATATAT+TGG + chr2_3:20855750-20855769 Msa0283570:intron 20.0%
!! GATATATTGGAAAATACATT+AGG + chr2_3:20855763-20855782 Msa0283570:intron 20.0%
!! TTTGTAATTAAATGTGAAAC+AGG - chr2_3:20855892-20855911 None:intergenic 20.0%
!! ATTATACCAAAAAACTATAG+TGG - chr2_3:20856323-20856342 None:intergenic 20.0%
!! TAATAGGTCATATTTGTAAA+AGG + chr2_3:20856552-20856571 Msa0283570:intron 20.0%
!!! TAGTAATGCTTTTTTTTAAC+TGG + chr2_3:20856913-20856932 Msa0283570:intron 20.0%
!!! AGTAATGCTTTTTTTTAACT+GGG + chr2_3:20856914-20856933 Msa0283570:intron 20.0%
!! ATTGAATAGACAATAATAAG+GGG - chr2_3:20857300-20857319 None:intergenic 20.0%
!! GTCATAACTAATACATATTT+AGG + chr2_3:20858123-20858142 Msa0283570:three_prime_UTR 20.0%
!! AACTATGGTGATAATTTATA+AGG + chr2_3:20858172-20858191 Msa0283570:three_prime_UTR 20.0%
! AATTTAACTCATTGGATTTG+AGG - chr2_3:20854289-20854308 None:intergenic 25.0%
! AATAAATTTACAGAGCGAAA+TGG + chr2_3:20854675-20854694 Msa0283570:intron 25.0%
!!! CTAAATAGGGTTTTAAATAG+AGG + chr2_3:20854814-20854833 Msa0283570:intron 25.0%
!!! TTTGTTATTAAAGAGGAATG+TGG + chr2_3:20854866-20854885 Msa0283570:intron 25.0%
! AAGCACAAAATGTGTAAAAA+GGG - chr2_3:20855145-20855164 None:intergenic 25.0%
! TTGCTTTGTAAATATGTGAA+TGG + chr2_3:20855163-20855182 Msa0283570:intron 25.0%
! TGCTTTGTAAATATGTGAAT+GGG + chr2_3:20855164-20855183 Msa0283570:intron 25.0%
! TTCTGAATTCATGTGTTAAA+TGG + chr2_3:20855215-20855234 Msa0283570:intron 25.0%
!! TTTAAGCGAATTTTGTAACA+TGG + chr2_3:20855741-20855760 Msa0283570:intron 25.0%
! AGTAAAAAAGGAAAGAGAAA+TGG - chr2_3:20856262-20856281 None:intergenic 25.0%
! ATAGTCGAATCAAGTAAAAA+AGG - chr2_3:20856274-20856293 None:intergenic 25.0%
!!! TGTTATCCACTATAGTTTTT+TGG + chr2_3:20856314-20856333 Msa0283570:intron 25.0%
! CAAAGAACTTCAAAAGAATA+TGG - chr2_3:20856706-20856725 None:intergenic 25.0%
!! ACCGTTTATTAATTTCCTTT+TGG + chr2_3:20857709-20857728 Msa0283570:intron 25.0%
! CCCAAAAGGAAATTAATAAA+CGG - chr2_3:20857713-20857732 None:intergenic 25.0%
!! CCGTTTATTAATTTCCTTTT+GGG + chr2_3:20857710-20857729 Msa0283570:intron 25.0%
!!! TTATTAATTTCCTTTTGGGA+TGG + chr2_3:20857714-20857733 Msa0283570:intron 25.0%
!!! TATTAATTTCCTTTTGGGAT+GGG + chr2_3:20857715-20857734 Msa0283570:intron 25.0%
! CAATAGTTAATGACAAACAA+AGG - chr2_3:20857822-20857841 None:intergenic 25.0%
!! CTTTGTTTGTCATTAACTAT+TGG + chr2_3:20857820-20857839 Msa0283570:intron 25.0%
! TAAATCCAAAAACAATCATC+TGG - chr2_3:20857979-20857998 None:intergenic 25.0%
!!! GTCATTTTTGTATCATTACT+TGG + chr2_3:20858196-20858215 Msa0283570:three_prime_UTR 25.0%
!!! TGTTGATAGAACAGTTTTTA+TGG + chr2_3:20858221-20858240 Msa0283570:three_prime_UTR 25.0%
! CCTTCAATTCATTTAATTGT+CGG + chr2_3:20858352-20858371 Msa0283570:three_prime_UTR 25.0%
! CTTCAATTCATTTAATTGTC+GGG + chr2_3:20858353-20858372 Msa0283570:three_prime_UTR 25.0%
! TAAAAAATTATACAGCACTC+AGG - chr2_3:20858431-20858450 None:intergenic 25.0%
!!! AGATTTTTGGTAGTTGAAGA+AGG - chr2_3:20854321-20854340 None:intergenic 30.0%
GAGTTCAATTGCATCAAAAT+GGG - chr2_3:20854597-20854616 None:intergenic 30.0%
TGAGTTCAATTGCATCAAAA+TGG - chr2_3:20854598-20854617 None:intergenic 30.0%
TAGGTTGTTAGCACATAAAA+TGG - chr2_3:20854730-20854749 None:intergenic 30.0%
TTTAATGTAATCACGTGTCA+TGG - chr2_3:20854954-20854973 None:intergenic 30.0%
CAAGCACAAAATGTGTAAAA+AGG - chr2_3:20855146-20855165 None:intergenic 30.0%
TGAATTCATGTGTTAAATGG+TGG + chr2_3:20855218-20855237 Msa0283570:intron 30.0%
TGTCTATCAAAAGGATTAAC+AGG - chr2_3:20855416-20855435 None:intergenic 30.0%
ATCACTAAGTTTCACATACA+AGG - chr2_3:20855572-20855591 None:intergenic 30.0%
TTTATACCTTTATATAGGCC+CGG + chr2_3:20855674-20855693 Msa0283570:intron 30.0%
GAAATAAAGTGAAAACAACG+TGG - chr2_3:20855921-20855940 None:intergenic 30.0%
TAGAAATATCATGGTCTGTT+TGG - chr2_3:20856060-20856079 None:intergenic 30.0%
AAACAGACCATGATATTTCT+AGG + chr2_3:20856059-20856078 Msa0283570:intron 30.0%
TGAAAGTCCTAGAAATATCA+TGG - chr2_3:20856069-20856088 None:intergenic 30.0%
! TAGGACTTTCAATATTGACT+GGG + chr2_3:20856078-20856097 Msa0283570:intron 30.0%
CAATGGTTATTGTGCTTATT+TGG + chr2_3:20856105-20856124 Msa0283570:intron 30.0%
!! TGTCAGACATAATGGTTTTA+TGG + chr2_3:20856222-20856241 Msa0283570:intron 30.0%
! TCACATGATGACTTCTAAAA+GGG + chr2_3:20856457-20856476 Msa0283570:intron 30.0%
ATTTATTACATACTCTGTCC+AGG - chr2_3:20856528-20856547 None:intergenic 30.0%
TCTAAGCATTCAAGGAAAAT+TGG + chr2_3:20856583-20856602 Msa0283570:intron 30.0%
TGATCATATAAGAATGCCTA+AGG - chr2_3:20856664-20856683 None:intergenic 30.0%
GAAGTTCTTTGTTACATCAT+TGG + chr2_3:20856715-20856734 Msa0283570:intron 30.0%
!!! AATGCTTTTTTTTAACTGGG+TGG + chr2_3:20856917-20856936 Msa0283570:intron 30.0%
! ATCTTTTTGTTCAACCAAGA+TGG + chr2_3:20857110-20857129 Msa0283570:CDS 30.0%
CAAGAACAGCGAATAAAATA+AGG - chr2_3:20857157-20857176 None:intergenic 30.0%
! CTTTTATTACCAATGTTTCC+CGG - chr2_3:20857638-20857657 None:intergenic 30.0%
! AGTTCCATGTATTTGAAACA+GGG - chr2_3:20857744-20857763 None:intergenic 30.0%
TAAGTCAATCCATATGATTG+TGG - chr2_3:20858024-20858043 None:intergenic 30.0%
CTATACACCTTATCATATTC+GGG - chr2_3:20858086-20858105 None:intergenic 30.0%
GCTATACACCTTATCATATT+CGG - chr2_3:20858087-20858106 None:intergenic 30.0%
! GAAGTAATTTGTACTTCAGA+GGG + chr2_3:20858259-20858278 Msa0283570:three_prime_UTR 30.0%
! AAGTAATTTGTACTTCAGAG+GGG + chr2_3:20858260-20858279 Msa0283570:three_prime_UTR 30.0%
CCGACAATTAAATGAATTGA+AGG - chr2_3:20858355-20858374 None:intergenic 30.0%
ATTGCAAAAACTACCTGAGA+TGG - chr2_3:20854496-20854515 None:intergenic 35.0%
! CAAAATGGGTATCGTGAATT+GGG - chr2_3:20854583-20854602 None:intergenic 35.0%
! TCAAAATGGGTATCGTGAAT+TGG - chr2_3:20854584-20854603 None:intergenic 35.0%
ATGCAATTGAACTCAAGCTA+GGG + chr2_3:20854603-20854622 Msa0283570:intron 35.0%
! AACATTTGGTAATATCCAGC+CGG - chr2_3:20855305-20855324 None:intergenic 35.0%
GGATATTACCAAATGTTTCC+TGG + chr2_3:20855308-20855327 Msa0283570:CDS 35.0%
! CCTTTTGATAGACATGTTAC+CGG + chr2_3:20855422-20855441 Msa0283570:CDS 35.0%
AAATAGAAAGCCACTTACGT+AGG - chr2_3:20855488-20855507 None:intergenic 35.0%
TTAGTGATAGCACGATTTAG+AGG + chr2_3:20855584-20855603 Msa0283570:intron 35.0%
GTTTAAACTGTGCTATAACC+GGG - chr2_3:20855695-20855714 None:intergenic 35.0%
CGTTTAAACTGTGCTATAAC+CGG - chr2_3:20855696-20855715 None:intergenic 35.0%
CGGTTATAGCACAGTTTAAA+CGG + chr2_3:20855694-20855713 Msa0283570:intron 35.0%
! GTTCCATACTATGTTTCTGT+CGG + chr2_3:20855813-20855832 Msa0283570:intron 35.0%
! TTCCATACTATGTTTCTGTC+GGG + chr2_3:20855814-20855833 Msa0283570:intron 35.0%
!!! CTGAACAAACTTTTGAGATC+GGG - chr2_3:20855943-20855962 None:intergenic 35.0%
!!! CCTGAACAAACTTTTGAGAT+CGG - chr2_3:20855944-20855963 None:intergenic 35.0%
CTAGGACTTTCAATATTGAC+TGG + chr2_3:20856077-20856096 Msa0283570:intron 35.0%
! AATATTGACTGGGTCAACAA+TGG + chr2_3:20856088-20856107 Msa0283570:intron 35.0%
ATGTGACAAAGGAGGTTTAA+TGG + chr2_3:20856191-20856210 Msa0283570:intron 35.0%
AAACCATTATGTCTGACAAG+TGG - chr2_3:20856220-20856239 None:intergenic 35.0%
!!! CAGACATAATGGTTTTATGG+TGG + chr2_3:20856225-20856244 Msa0283570:intron 35.0%
! GTTTTATGGTGGCATCAAAA+TGG + chr2_3:20856236-20856255 Msa0283570:intron 35.0%
AAGTTGCAAAAGCTAGACAT+AGG + chr2_3:20856428-20856447 Msa0283570:intron 35.0%
CTCACATGATGACTTCTAAA+AGG + chr2_3:20856456-20856475 Msa0283570:intron 35.0%
! CACATGATGACTTCTAAAAG+GGG + chr2_3:20856458-20856477 Msa0283570:intron 35.0%
CATAAACCTAAGGATGTGTT+AGG + chr2_3:20856481-20856500 Msa0283570:intron 35.0%
ATTCAGCATCTAAGCATTCA+AGG + chr2_3:20856575-20856594 Msa0283570:intron 35.0%
! TTTGCTACTTATGTTGAAGC+TGG + chr2_3:20857079-20857098 Msa0283570:CDS 35.0%
ATGTGTTACAGATACCAAAC+TGG + chr2_3:20857423-20857442 Msa0283570:intron 35.0%
TGTGAAAGCCATCTTACAAT+CGG - chr2_3:20857459-20857478 None:intergenic 35.0%
GTTTCCCTGTTTCAAATACA+TGG + chr2_3:20857737-20857756 Msa0283570:intron 35.0%
! CAGTTCCATGTATTTGAAAC+AGG - chr2_3:20857745-20857764 None:intergenic 35.0%
CTGTTTCAAATACATGGAAC+TGG + chr2_3:20857743-20857762 Msa0283570:intron 35.0%
TTGTCATTAACTATTGGCAG+AGG + chr2_3:20857826-20857845 Msa0283570:intron 35.0%
TGTCATTAACTATTGGCAGA+GGG + chr2_3:20857827-20857846 Msa0283570:intron 35.0%
! GAGATCCAGATGATTGTTTT+TGG + chr2_3:20857971-20857990 Msa0283570:CDS 35.0%
TCCAGCAGAAAACAAAACTA+TGG + chr2_3:20858157-20858176 Msa0283570:three_prime_UTR 35.0%
!!! ACCATAGTTTTGTTTTCTGC+TGG - chr2_3:20858161-20858180 None:intergenic 35.0%
! AACAGTTTTTATGGCTTCCA+GGG + chr2_3:20858230-20858249 Msa0283570:three_prime_UTR 35.0%
! GGAAGTAATTTGTACTTCAG+AGG + chr2_3:20858258-20858277 Msa0283570:three_prime_UTR 35.0%
TTTAATTGTCGGGAGTTTGT+CGG + chr2_3:20858363-20858382 Msa0283570:three_prime_UTR 35.0%
TTTCTGCAAAACATGAGCTA+TGG + chr2_3:20858463-20858482 Msa0283570:three_prime_UTR 35.0%
TAGGCATGAAACTTGCGTAA+CGG - chr2_3:20854536-20854555 None:intergenic 40.0%
GATGCAATTGAACTCAAGCT+AGG + chr2_3:20854602-20854621 Msa0283570:intron 40.0%
AATGTAATCACGTGTCATGG+TGG - chr2_3:20854951-20854970 None:intergenic 40.0%
TGTCAATGCTTCACAATACG+TGG + chr2_3:20855040-20855059 Msa0283570:intron 40.0%
GGGTATAAAATAAAGGTCCG+TGG - chr2_3:20855125-20855144 None:intergenic 40.0%
CTTCTGTGTATTGTAGTCTC+AGG + chr2_3:20855250-20855269 Msa0283570:intron 40.0%
CCGGTAACATGTCTATCAAA+AGG - chr2_3:20855425-20855444 None:intergenic 40.0%
!! AATGGAATCAGGGTGTTGTA+TGG - chr2_3:20855452-20855471 None:intergenic 40.0%
CTATAACCGGGCCTATATAA+AGG - chr2_3:20855683-20855702 None:intergenic 40.0%
! TCCATACTATGTTTCTGTCG+GGG + chr2_3:20855815-20855834 Msa0283570:intron 40.0%
TTCTCAAACCAAACAGACTC+TGG - chr2_3:20855849-20855868 None:intergenic 40.0%
! CCGATCTCAAAAGTTTGTTC+AGG + chr2_3:20855941-20855960 Msa0283570:intron 40.0%
CAACTGCTAGAATGTGACAA+AGG + chr2_3:20856180-20856199 Msa0283570:intron 40.0%
! CTAAAAGGGGCATAAACCTA+AGG + chr2_3:20856471-20856490 Msa0283570:intron 40.0%
ACCTAAGGATGTGTTAGGTA+CGG + chr2_3:20856486-20856505 Msa0283570:intron 40.0%
!!! GGGACTGTTTTAAGTTTTCC+TGG + chr2_3:20856507-20856526 Msa0283570:intron 40.0%
! GTGCATATGAGTTGAACACA+CGG - chr2_3:20856782-20856801 None:intergenic 40.0%
GGGTGGTCATATTTATCAGT+AGG + chr2_3:20856934-20856953 Msa0283570:intron 40.0%
CTTACAACAACTTGTCTCTG+AGG - chr2_3:20857032-20857051 None:intergenic 40.0%
CTCAGAGACAAGTTGTTGTA+AGG + chr2_3:20857030-20857049 Msa0283570:CDS 40.0%
TGTTCAACCAAGATGGATCA+AGG + chr2_3:20857117-20857136 Msa0283570:CDS 40.0%
ATGCGTGATTGTCACATATC+AGG + chr2_3:20857237-20857256 Msa0283570:intron 40.0%
CACATATCAGGTCTCAAACT+CGG + chr2_3:20857249-20857268 Msa0283570:intron 40.0%
ACATATCAGGTCTCAAACTC+GGG + chr2_3:20857250-20857269 Msa0283570:intron 40.0%
AGTAAGCAAATCATACCTGC+TGG - chr2_3:20857579-20857598 None:intergenic 40.0%
!! GAGTTTGCAGTTGTTTCTGT+TGG + chr2_3:20857612-20857631 Msa0283570:intron 40.0%
! ACATGGAACTGGTTTCTCTA+TGG + chr2_3:20857754-20857773 Msa0283570:intron 40.0%
CATTCTCATTCTCGATTGCA+CGG - chr2_3:20857898-20857917 None:intergenic 40.0%
GTGACAGCATACCAGAAAAT+AGG + chr2_3:20858050-20858069 Msa0283570:three_prime_UTR 40.0%
AGCATACCAGAAAATAGGAG+AGG + chr2_3:20858055-20858074 Msa0283570:three_prime_UTR 40.0%
GCATACCAGAAAATAGGAGA+GGG + chr2_3:20858056-20858075 Msa0283570:three_prime_UTR 40.0%
! GAAAACCCTCTCCTATTTTC+TGG - chr2_3:20858064-20858083 None:intergenic 40.0%
! GGGTTTTCCCGAATATGATA+AGG + chr2_3:20858076-20858095 Msa0283570:three_prime_UTR 40.0%
! GAACAGTTTTTATGGCTTCC+AGG + chr2_3:20858229-20858248 Msa0283570:three_prime_UTR 40.0%
CAATCATAAACAGACACCAG+GGG - chr2_3:20858300-20858319 None:intergenic 40.0%
CCAATCATAAACAGACACCA+GGG - chr2_3:20858301-20858320 None:intergenic 40.0%
ACCAATCATAAACAGACACC+AGG - chr2_3:20858302-20858321 None:intergenic 40.0%
TGAAGTAAACGGCACCGTTT+CGG - chr2_3:20854428-20854447 None:intergenic 45.0%
GGGAGAGGTTGTGAAGTAAA+CGG - chr2_3:20854439-20854458 None:intergenic 45.0%
GATTTCTGCGAAGAGGAAGA+AGG - chr2_3:20854463-20854482 None:intergenic 45.0%
ACTACCTGAGATGGATCTTG+TGG - chr2_3:20854487-20854506 None:intergenic 45.0%
!!! AGGGTTTTAAATAGAGGGCG+CGG + chr2_3:20854820-20854839 Msa0283570:intron 45.0%
CCGGCAAATTGGAAAATGTC+GGG - chr2_3:20855277-20855296 None:intergenic 45.0%
! CCCGACATTTTCCAATTTGC+CGG + chr2_3:20855274-20855293 Msa0283570:CDS 45.0%
GCCGGCAAATTGGAAAATGT+CGG - chr2_3:20855278-20855297 None:intergenic 45.0%
! TTGGTAATATCCAGCCGGAT+AGG - chr2_3:20855300-20855319 None:intergenic 45.0%
GGTGCATACCAGGAAACATT+TGG - chr2_3:20855319-20855338 None:intergenic 45.0%
TCAACCCTGGAATCAATGCA+GGG - chr2_3:20855340-20855359 None:intergenic 45.0%
! GTTGACTCCACCACAAATTG+AGG + chr2_3:20855355-20855374 Msa0283570:CDS 45.0%
TTCGCAGGTTCCTCAATTTG+TGG - chr2_3:20855368-20855387 None:intergenic 45.0%
GCGGTAAGTCAATGGAATCA+GGG - chr2_3:20855462-20855481 None:intergenic 45.0%
TGCGGTAAGTCAATGGAATC+AGG - chr2_3:20855463-20855482 None:intergenic 45.0%
ACCCCGACAGAAACATAGTA+TGG - chr2_3:20855819-20855838 None:intergenic 45.0%
TGAACTGTCCAGAGTCTGTT+TGG + chr2_3:20855838-20855857 Msa0283570:intron 45.0%
CTGCTAGAATGTGACAAAGG+AGG + chr2_3:20856183-20856202 Msa0283570:intron 45.0%
! CTGCCACTTGTCAGACATAA+TGG + chr2_3:20856214-20856233 Msa0283570:intron 45.0%
GGATAACATGCTGCTAATGC+AGG - chr2_3:20856302-20856321 None:intergenic 45.0%
CCTAAGGATGTGTTAGGTAC+GGG + chr2_3:20856487-20856506 Msa0283570:intron 45.0%
TGGACCTGATTCTGATTTCC+TGG + chr2_3:20856603-20856622 Msa0283570:intron 45.0%
GCTACCAGGAAATCAGAATC+AGG - chr2_3:20856610-20856629 None:intergenic 45.0%
! CTCTGACACCGATTGTAAGA+TGG + chr2_3:20857448-20857467 Msa0283570:CDS 45.0%
CTGAAAATGTACCTCCTGCA+GGG + chr2_3:20857532-20857551 Msa0283570:CDS 45.0%
AAGCAAATCATACCTGCTGG+AGG - chr2_3:20857576-20857595 None:intergenic 45.0%
!! TTGCAGTTGTTTCTGTTGGC+CGG + chr2_3:20857616-20857635 Msa0283570:intron 45.0%
! GGAACTGGTTTCTCTATGGA+AGG + chr2_3:20857758-20857777 Msa0283570:intron 45.0%
! ATTACCAGGCTGGTTCTCAA+TGG - chr2_3:20857867-20857886 None:intergenic 45.0%
ATTGAGAACCAGCCTGGTAA+TGG + chr2_3:20857866-20857885 Msa0283570:CDS 45.0%
AATGAGAATGTCCCAGAAGC+TGG + chr2_3:20857908-20857927 Msa0283570:CDS 45.0%
TTTATCACTTCCCTGCTTCC+TGG + chr2_3:20857995-20858014 Msa0283570:CDS 45.0%
TTATCACTTCCCTGCTTCCT+GGG + chr2_3:20857996-20858015 Msa0283570:CDS 45.0%
TCCTGGGTTCCACAATCATA+TGG + chr2_3:20858012-20858031 Msa0283570:CDS 45.0%
TCCATATGATTGTGGAACCC+AGG - chr2_3:20858016-20858035 None:intergenic 45.0%
CCCTGGTGTCTGTTTATGAT+TGG + chr2_3:20858298-20858317 Msa0283570:three_prime_UTR 45.0%
GTTCACTTACCCACTCTAGA+AGG - chr2_3:20858491-20858510 None:intergenic 45.0%
GTGGGTAAGTGAACTGATAG+TGG + chr2_3:20858497-20858516 Msa0283570:three_prime_UTR 45.0%
!! TATGTAATAAATTAATTAAT+AGG + chr2_3:20856536-20856555 Msa0283570:intron 5.0%
AAGTAAACGGCACCGTTTCG+GGG - chr2_3:20854426-20854445 None:intergenic 50.0%
GAAGTAAACGGCACCGTTTC+GGG - chr2_3:20854427-20854446 None:intergenic 50.0%
TCTGCGAAGAGGAAGAAGGT+GGG - chr2_3:20854459-20854478 None:intergenic 50.0%
TTCTGCGAAGAGGAAGAAGG+TGG - chr2_3:20854460-20854479 None:intergenic 50.0%
TTGTGGCGATTTCTGCGAAG+AGG - chr2_3:20854470-20854489 None:intergenic 50.0%
ATCGCCACAAGATCCATCTC+AGG + chr2_3:20854480-20854499 Msa0283570:CDS 50.0%
TTCCAATTTGCCGGCCTATC+CGG + chr2_3:20855283-20855302 Msa0283570:CDS 50.0%
TAATATCCAGCCGGATAGGC+CGG - chr2_3:20855296-20855315 None:intergenic 50.0%
ATCAATGCAGGGTGCATACC+AGG - chr2_3:20855329-20855348 None:intergenic 50.0%
!! ATGCACCCTGCATTGATTCC+AGG + chr2_3:20855332-20855351 Msa0283570:CDS 50.0%
!! TGCACCCTGCATTGATTCCA+GGG + chr2_3:20855333-20855352 Msa0283570:CDS 50.0%
GTCAACCCTGGAATCAATGC+AGG - chr2_3:20855341-20855360 None:intergenic 50.0%
! ATTTGTGGTGGAGTCAACCC+TGG - chr2_3:20855353-20855372 None:intergenic 50.0%
GCAGGTTCCTCAATTTGTGG+TGG - chr2_3:20855365-20855384 None:intergenic 50.0%
CAGCATATAAGCCAGCTCCA+CGG - chr2_3:20855391-20855410 None:intergenic 50.0%
!! CAGGGTGTTGTATGGAAGTC+CGG - chr2_3:20855444-20855463 None:intergenic 50.0%
GTAGGTGTGCGGTAAGTCAA+TGG - chr2_3:20855470-20855489 None:intergenic 50.0%
TTACCGCACACCTACGTAAG+TGG + chr2_3:20855475-20855494 Msa0283570:intron 50.0%
AAGCCACTTACGTAGGTGTG+CGG - chr2_3:20855481-20855500 None:intergenic 50.0%
CCCGTACCTAACACATCCTT+AGG - chr2_3:20856490-20856509 None:intergenic 50.0%
! TGGTCTTGGGGGTAAACCTT+AGG + chr2_3:20856645-20856664 Msa0283570:intron 50.0%
! CATGCTCTGAATGGCACTAG+TGG - chr2_3:20856758-20856777 None:intergenic 50.0%
! ACACACGGTCATGCTCTGAA+TGG - chr2_3:20856767-20856786 None:intergenic 50.0%
! TGCTTGCCCCTGATTTTCAC+CGG - chr2_3:20856982-20857001 None:intergenic 50.0%
!! ACAACTTGTCTCTGAGGTGC+AGG - chr2_3:20857026-20857045 None:intergenic 50.0%
ACCAAGATGGATCAAGGCAG+AGG + chr2_3:20857123-20857142 Msa0283570:CDS 50.0%
!! AGGAGGTACATTTTCAGCCC+TGG - chr2_3:20857529-20857548 None:intergenic 50.0%
GCTGAAAATGTACCTCCTGC+AGG + chr2_3:20857531-20857550 Msa0283570:CDS 50.0%
!! TGCAGTTGTTTCTGTTGGCC+GGG + chr2_3:20857617-20857636 Msa0283570:intron 50.0%
TTCTGTTGGCCGGGAAACAT+TGG + chr2_3:20857626-20857645 Msa0283570:intron 50.0%
ACAGGGAAACCCATCCCAAA+AGG - chr2_3:20857727-20857746 None:intergenic 50.0%
TGGTTCTCAATGGCAGCATC+AGG - chr2_3:20857857-20857876 None:intergenic 50.0%
ATTGTGGAACCCAGGAAGCA+GGG - chr2_3:20858008-20858027 None:intergenic 50.0%
! TTTTATGGCTTCCAGGGCAC+AGG + chr2_3:20858236-20858255 Msa0283570:three_prime_UTR 50.0%
TTTATGGCTTCCAGGGCACA+GGG + chr2_3:20858237-20858256 Msa0283570:three_prime_UTR 50.0%
CAAATTACTTCCCTGTGCCC+TGG - chr2_3:20858250-20858269 None:intergenic 50.0%
TCATAAACAGACACCAGGGG+TGG - chr2_3:20858297-20858316 None:intergenic 50.0%
AATTGTCGGGAGTTTGTCGG+CGG + chr2_3:20858366-20858385 Msa0283570:three_prime_UTR 50.0%
! AGCTATGGTGCCTTCTAGAG+TGG + chr2_3:20858478-20858497 Msa0283570:three_prime_UTR 50.0%
!! GCTATGGTGCCTTCTAGAGT+GGG + chr2_3:20858479-20858498 Msa0283570:three_prime_UTR 50.0%
AGTAAACGGCACCGTTTCGG+GGG - chr2_3:20854425-20854444 None:intergenic 55.0%
GAAGAGGAAGAAGGTGGGAG+AGG - chr2_3:20854454-20854473 None:intergenic 55.0%
GATGCAGCCTCATTCCTCGT+GGG + chr2_3:20854901-20854920 Msa0283570:intron 55.0%
! TGGTGTCAGTGTCAGACACG+TGG - chr2_3:20854931-20854950 None:intergenic 55.0%
TGTGGCGCAAATCGCATCCA+CGG + chr2_3:20855105-20855124 Msa0283570:intron 55.0%
ATTGAGGAACCTGCGAACCG+TGG + chr2_3:20855371-20855390 Msa0283570:CDS 55.0%
!! GCACAGCTCGTGTTGGTCTT+GGG + chr2_3:20856632-20856651 Msa0283570:intron 55.0%
!! CACAGCTCGTGTTGGTCTTG+GGG + chr2_3:20856633-20856652 Msa0283570:intron 55.0%
!! ACAGCTCGTGTTGGTCTTGG+GGG + chr2_3:20856634-20856653 Msa0283570:intron 55.0%
GCAGCAGCAGCTTCAGAAGT+TGG - chr2_3:20856960-20856979 None:intergenic 55.0%
!! ACTTCTGAAGCTGCTGCTGC+CGG + chr2_3:20856960-20856979 Msa0283570:CDS 55.0%
TGCTGCTGCCGGTGAAAATC+AGG + chr2_3:20856971-20856990 Msa0283570:CDS 55.0%
GCTGCTGCCGGTGAAAATCA+GGG + chr2_3:20856972-20856991 Msa0283570:CDS 55.0%
CTGCTGCCGGTGAAAATCAG+GGG + chr2_3:20856973-20856992 Msa0283570:CDS 55.0%
GCCTCTGCCTTGATCCATCT+TGG - chr2_3:20857127-20857146 None:intergenic 55.0%
!! TCGGTGTCAGAGCTCCAGTT+TGG - chr2_3:20857440-20857459 None:intergenic 55.0%
! ACATTTTCAGCCCTGGCTGC+AGG - chr2_3:20857522-20857541 None:intergenic 55.0%
AAATGTACCTCCTGCAGGGC+AGG + chr2_3:20857536-20857555 Msa0283570:CDS 55.0%
! CATACCTGCTGGAGGAGCAT+TGG - chr2_3:20857568-20857587 None:intergenic 55.0%
AATGTCCCAGAAGCTGGCAG+AGG + chr2_3:20857914-20857933 Msa0283570:CDS 55.0%
CATTGCCTCTGCCAGCTTCT+GGG - chr2_3:20857922-20857941 None:intergenic 55.0%
CAATGGTGGCAACCAGTGGT+GGG + chr2_3:20857937-20857956 Msa0283570:CDS 55.0%
AATGGTGGCAACCAGTGGTG+GGG + chr2_3:20857938-20857957 Msa0283570:CDS 55.0%
CCTTTACAATGCCCCACCAC+TGG - chr2_3:20857952-20857971 None:intergenic 55.0%
!! CCAGTGGTGGGGCATTGTAA+AGG + chr2_3:20857949-20857968 Msa0283570:CDS 55.0%
GATTGTGGAACCCAGGAAGC+AGG - chr2_3:20858009-20858028 None:intergenic 55.0%
GGCAGTTGTTAATCCACCCC+TGG + chr2_3:20858281-20858300 Msa0283570:three_prime_UTR 55.0%
GGCAGAAAACGCCCCCGAAA+CGG + chr2_3:20854411-20854430 Msa0283570:CDS 60.0%
CGATGCAGCCTCATTCCTCG+TGG + chr2_3:20854900-20854919 Msa0283570:intron 60.0%
AGCCGGATAGGCCGGCAAAT+TGG - chr2_3:20855288-20855307 None:intergenic 60.0%
AATTTGCCGGCCTATCCGGC+TGG + chr2_3:20855287-20855306 Msa0283570:CDS 60.0%
GTAGCACGCACAGCTCGTGT+TGG + chr2_3:20856625-20856644 Msa0283570:intron 60.0%
! CGCACAGCTCGTGTTGGTCT+TGG + chr2_3:20856631-20856650 Msa0283570:intron 60.0%
TCCACCAAGACCTGCAGCCA+GGG + chr2_3:20857509-20857528 Msa0283570:CDS 60.0%
GTTGCCAATGCTCCTCCAGC+AGG + chr2_3:20857561-20857580 Msa0283570:CDS 60.0%
GCTGCCATTGAGAACCAGCC+TGG + chr2_3:20857860-20857879 Msa0283570:CDS 60.0%
GGTCTGCACCATTACCAGGC+TGG - chr2_3:20857877-20857896 None:intergenic 60.0%
GCACGGTCTGCACCATTACC+AGG - chr2_3:20857881-20857900 None:intergenic 60.0%
CCATTGCCTCTGCCAGCTTC+TGG - chr2_3:20857923-20857942 None:intergenic 60.0%
CCAGAAGCTGGCAGAGGCAA+TGG + chr2_3:20857920-20857939 Msa0283570:CDS 60.0%
GAAGCTGGCAGAGGCAATGG+TGG + chr2_3:20857923-20857942 Msa0283570:CDS 60.0%
GAGGCAATGGTGGCAACCAG+TGG + chr2_3:20857933-20857952 Msa0283570:CDS 60.0%
GCAATGGTGGCAACCAGTGG+TGG + chr2_3:20857936-20857955 Msa0283570:CDS 60.0%
GGGCGCGGTAACGATTGCAG+TGG + chr2_3:20854835-20854854 Msa0283570:intron 65.0%
TGGCACGCCCACGAGGAATG+AGG - chr2_3:20854911-20854930 None:intergenic 65.0%
GAACCTGCGAACCGTGGAGC+TGG + chr2_3:20855377-20855396 Msa0283570:CDS 65.0%
AAGCCAGCTCCACGGTTCGC+AGG - chr2_3:20855383-20855402 None:intergenic 65.0%
CACGAGCTGTGCGTGCTACC+AGG - chr2_3:20856624-20856643 None:intergenic 65.0%
!! CTCTGAGGTGCAGGCTGCTG+AGG - chr2_3:20857017-20857036 None:intergenic 65.0%
! GCAGGTCTTGGTGGACGAGG+AGG - chr2_3:20857504-20857523 None:intergenic 65.0%
! GCTGCAGGTCTTGGTGGACG+AGG - chr2_3:20857507-20857526 None:intergenic 65.0%
GTCCACCAAGACCTGCAGCC+AGG + chr2_3:20857508-20857527 Msa0283570:CDS 65.0%
TCAGCCCTGGCTGCAGGTCT+TGG - chr2_3:20857516-20857535 None:intergenic 65.0%
TGTACCTCCTGCAGGGCAGG+TGG + chr2_3:20857539-20857558 Msa0283570:CDS 65.0%
TTGGCAACCACCTGCCCTGC+AGG - chr2_3:20857549-20857568 None:intergenic 65.0%
AGACACGTGGCACGCCCACG+AGG - chr2_3:20854918-20854937 None:intergenic 70.0%
GCCCTGGCTGCAGGTCTTGG+TGG - chr2_3:20857513-20857532 None:intergenic 70.0%
GCAACCACCTGCCCTGCAGG+AGG - chr2_3:20857546-20857565 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 20854263 20858520 20854263 ID=Msa0283570;Name=Msa0283570
chr2_3 mRNA 20854263 20858520 20854263 ID=Msa0283570-mRNA-1;Parent=Msa0283570;Name=Msa0283570-mRNA-1;_AED=0.06;_eAED=0.06;_QI=146|1|1|1|1|1|5|481|296
chr2_3 exon 20854263 20854501 20854263 ID=Msa0283570-mRNA-1:exon:8256;Parent=Msa0283570-mRNA-1
chr2_3 exon 20855266 20855489 20855266 ID=Msa0283570-mRNA-1:exon:8257;Parent=Msa0283570-mRNA-1
chr2_3 exon 20856953 20857183 20856953 ID=Msa0283570-mRNA-1:exon:8258;Parent=Msa0283570-mRNA-1
chr2_3 exon 20857434 20857582 20857434 ID=Msa0283570-mRNA-1:exon:8259;Parent=Msa0283570-mRNA-1
chr2_3 exon 20857846 20858520 20857846 ID=Msa0283570-mRNA-1:exon:8260;Parent=Msa0283570-mRNA-1
chr2_3 five_prime_UTR 20854263 20854408 20854263 ID=Msa0283570-mRNA-1:five_prime_utr;Parent=Msa0283570-mRNA-1
chr2_3 CDS 20854409 20854501 20854409 ID=Msa0283570-mRNA-1:cds;Parent=Msa0283570-mRNA-1
chr2_3 CDS 20855266 20855489 20855266 ID=Msa0283570-mRNA-1:cds;Parent=Msa0283570-mRNA-1
chr2_3 CDS 20856953 20857183 20856953 ID=Msa0283570-mRNA-1:cds;Parent=Msa0283570-mRNA-1
chr2_3 CDS 20857434 20857582 20857434 ID=Msa0283570-mRNA-1:cds;Parent=Msa0283570-mRNA-1
chr2_3 CDS 20857846 20858039 20857846 ID=Msa0283570-mRNA-1:cds;Parent=Msa0283570-mRNA-1
chr2_3 three_prime_UTR 20858040 20858520 20858040 ID=Msa0283570-mRNA-1:three_prime_utr;Parent=Msa0283570-mRNA-1
Gene Sequence

>Msa0283570

ATGGCAGAAAACGCCCCCGAAACGGTGCCGTTTACTTCACAACCTCTCCCACCTTCTTCCTCTTCGCAGAAATCGCCACAAGATCCATCTCAGTCTCAGGTCCCGACATTTTCCAATTTGCCGGCCTATCCGGCTGGATATTACCAAATGTTTCCTGGTATGCACCCTGCATTGATTCCAGGGTTGACTCCACCACAAATTGAGGAACCTGCGAACCGTGGAGCTGGCTTATATGCTGTTCCTGTTAATCCTTTTGATAGACATGTTACCGGACTTCCATACAACACCCTGATTCCATTGACTTACCGCACACCTACTAGGCCAACTTCTGAAGCTGCTGCTGCCGGTGAAAATCAGGGGCAAGCAGCGCAGCAACATCCTCAGCAGCCTGCACCTCAGAGACAAGTTGTTGTAAGGAGATTTCAAATTGCATTTCAAATCGATTTGCTACTTATGTTGAAGCTGGCAGCTGTTATCTTTTTGTTCAACCAAGATGGATCAAGGCAGAGGCTTGTTGTCCTTATTTTATTCGCTGTTCTTGTATATTTATACCAAACTGGAGCTCTGACACCGATTGTAAGATGGCTTTCACAAAATATGCAAAGAGCTGCAGCACCTCCTCGTCCACCAAGACCTGCAGCCAGGGCTGAAAATGTACCTCCTGCAGGGCAGGTGGTTGCCAATGCTCCTCCAGCAGAGGGTCAACCTGATGCTGCCATTGAGAACCAGCCTGGTAATGGTGCAGACCGTGCAATCGAGAATGAGAATGTCCCAGAAGCTGGCAGAGGCAATGGTGGCAACCAGTGGTGGGGCATTGTAAAGGAGATCCAGATGATTGTTTTTGGATTTATCACTTCCCTGCTTCCTGGGTTCCACAATCATATGGATTGA
Protein sequence

>Msa0283570

MAENAPETVPFTSQPLPPSSSSQKSPQDPSQSQVPTFSNLPAYPAGYYQMFPGMHPALIPGLTPPQIEEPANRGAGLYAVPVNPFDRHVTGLPYNTLIPLTYRTPTRPTSEAAAAGENQGQAAQQHPQQPAPQRQVVVRRFQIAFQIDLLLMLKLAAVIFLFNQDGSRQRLVVLILFAVLVYLYQTGALTPIVRWLSQNMQRAAAPPRPPRPAARAENVPPAGQVVANAPPAEGQPDAAIENQPGNGADRAIENENVPEAGRGNGGNQWWGIVKEIQMIVFGFITSLLPGFHNHMD*