Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283950 | XP_003595198.3 | 95.926 | 270 | 11 | 0 | 1 | 270 | 1 | 270 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283950 | A2Q1D0 | 95.926 | 270 | 11 | 0 | 1 | 270 | 1 | 270 | 0.0 | 538 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0283950 | Msa0562660 | 0.812837 | 3.467696e-51 | -8.615850e-47 |
| Msa0283950 | Msa0681250 | 0.800085 | 1.700825e-48 | -8.615850e-47 |
| Msa0283950 | Msa0843490 | 0.809982 | 1.445157e-50 | -8.615850e-47 |
| Msa0283950 | Msa1066670 | 0.806029 | 1.003102e-49 | -8.615850e-47 |
| Msa0283950 | Msa1319560 | 0.803414 | 3.525985e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283950 | MtrunA17_Chr2g0299461 | 80.126 | 317 | 11 | 1 | 6 | 270 | 1 | 317 | 0.0 | 504 |
| Msa0283950 | MtrunA17_Chr2g0299421 | 82.375 | 261 | 44 | 1 | 12 | 270 | 13 | 273 | 1.16e-161 | 449 |
| Msa0283950 | MtrunA17_Chr2g0299401 | 76.046 | 263 | 61 | 1 | 10 | 270 | 7 | 269 | 2.59e-147 | 413 |
| Msa0283950 | MtrunA17_Chr2g0299391 | 70.455 | 264 | 78 | 0 | 3 | 266 | 5 | 268 | 7.02e-135 | 382 |
| Msa0283950 | MtrunA17_Chr4g0071071 | 70.115 | 261 | 76 | 2 | 8 | 268 | 91 | 349 | 2.21e-132 | 378 |
| Msa0283950 | MtrunA17_Chr4g0071091 | 63.359 | 262 | 95 | 1 | 1 | 262 | 1 | 261 | 1.82e-127 | 362 |
| Msa0283950 | MtrunA17_Chr1g0151361 | 58.203 | 256 | 106 | 1 | 13 | 268 | 8 | 262 | 1.62e-106 | 310 |
| Msa0283950 | MtrunA17_Chr1g0151381 | 42.105 | 152 | 67 | 2 | 118 | 268 | 5 | 136 | 6.07e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283950 | AT3G47590.1 | 64.865 | 259 | 88 | 2 | 7 | 265 | 53 | 308 | 8.48e-123 | 353 |
| Msa0283950 | AT1G29840.1 | 61.132 | 265 | 100 | 2 | 1 | 265 | 50 | 311 | 2.05e-118 | 342 |
| Msa0283950 | AT3G47560.1 | 62.162 | 259 | 92 | 3 | 1 | 259 | 1 | 253 | 5.28e-116 | 334 |
| Msa0283950 | AT3G47560.4 | 62.162 | 259 | 92 | 3 | 1 | 259 | 37 | 289 | 4.48e-115 | 333 |
| Msa0283950 | AT5G11910.4 | 58.491 | 265 | 107 | 2 | 2 | 266 | 29 | 290 | 1.14e-112 | 327 |
| Msa0283950 | AT5G11910.1 | 58.491 | 265 | 107 | 2 | 2 | 266 | 11 | 272 | 1.34e-112 | 326 |
| Msa0283950 | AT3G47560.3 | 56.890 | 283 | 94 | 3 | 1 | 259 | 1 | 279 | 3.97e-112 | 325 |
| Msa0283950 | AT3G47560.5 | 56.294 | 286 | 92 | 4 | 1 | 259 | 1 | 280 | 2.12e-109 | 318 |
| Msa0283950 | AT3G47560.2 | 51.935 | 310 | 94 | 4 | 1 | 259 | 1 | 306 | 1.88e-105 | 309 |
| Msa0283950 | AT2G19550.1 | 56.299 | 254 | 101 | 6 | 14 | 262 | 5 | 253 | 6.31e-99 | 293 |
| Msa0283950 | AT3G47590.2 | 66.049 | 162 | 54 | 1 | 7 | 168 | 53 | 213 | 8.21e-76 | 230 |
| Msa0283950 | AT5G11910.2 | 58.940 | 151 | 61 | 1 | 2 | 152 | 11 | 160 | 1.30e-59 | 187 |
| Msa0283950 | AT5G11910.3 | 58.940 | 151 | 61 | 1 | 2 | 152 | 29 | 178 | 1.37e-59 | 187 |
Find 80 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGTGACATTACTGATTA+TGG | 0.151349 | 2_3:-21702155 | Msa0283950:three_prime_UTR |
| ACGCCTTGGTAAAGATTATT+TGG | 0.161587 | 2_3:-21702912 | Msa0283950:CDS |
| TAGCTAACAGTGCCCTTATT+AGG | 0.209418 | 2_3:+21702231 | None:intergenic |
| TCTGGATGAAGATATTAAAT+AGG | 0.215637 | 2_3:-21702097 | Msa0283950:three_prime_UTR |
| GGAAACCATTGACCCTAATA+AGG | 0.268376 | 2_3:-21702244 | Msa0283950:CDS |
| TGTTACTAAGGAAAGTTTAA+TGG | 0.281740 | 2_3:-21702610 | Msa0283950:CDS |
| ATCTACTGTTGCAGGAAGTT+TGG | 0.288030 | 2_3:-21702640 | Msa0283950:intron |
| TTGGAAAACAAGAATATTAT+AGG | 0.303949 | 2_3:+21702174 | None:intergenic |
| CGTTCCAGTATGGTAACTAT+TGG | 0.315195 | 2_3:-21703708 | Msa0283950:CDS |
| GTTCCAGTATGGTAACTATT+GGG | 0.346161 | 2_3:-21703707 | Msa0283950:CDS |
| CGTGTAATCCGTGCAATTGT+TGG | 0.348094 | 2_3:-21703634 | Msa0283950:CDS |
| ATTGACACTCTCACACTCTA+AGG | 0.355067 | 2_3:-21705880 | Msa0283950:five_prime_UTR |
| ATGATATGCAACTTGTGATT+TGG | 0.362877 | 2_3:+21702336 | None:intergenic |
| CTTCATCATGGTAAATAATC+TGG | 0.364748 | 2_3:-21702115 | Msa0283950:three_prime_UTR |
| CTGGATGAAGATATTAAATA+GGG | 0.373832 | 2_3:-21702096 | Msa0283950:three_prime_UTR |
| TTGAGCACTGTCGATCGATT+AGG | 0.383850 | 2_3:+21706216 | None:intergenic |
| AGCTAACAGTGCCCTTATTA+GGG | 0.391314 | 2_3:+21702232 | None:intergenic |
| ATGACTACTGTATGCATGAT+TGG | 0.408416 | 2_3:+21702305 | None:intergenic |
| AGTGCCCTTATTAGGGTCAA+TGG | 0.409356 | 2_3:+21702239 | None:intergenic |
| CGGAATTGATTGAATGAAAA+CGG | 0.417100 | 2_3:+21706253 | None:intergenic |
| GGCGAACCTTGTTGCTGCAT+TGG | 0.427841 | 2_3:-21705490 | Msa0283950:CDS |
| CCTTGTTGCTGCATTGGAAA+AGG | 0.433275 | 2_3:-21705484 | Msa0283950:CDS |
| ATTGATGTGAAGACGAAGTC+AGG | 0.444727 | 2_3:-21702866 | Msa0283950:intron |
| AGCGAAGGTTCGTTCCAGTA+TGG | 0.446124 | 2_3:-21703718 | Msa0283950:CDS |
| AACAAGGTTCGCCATGAGAT+TGG | 0.450149 | 2_3:+21705500 | None:intergenic |
| CAACTCGGATCGAAGGAATT+CGG | 0.450533 | 2_3:+21706280 | None:intergenic |
| TTTGGATTACCGTGTTACTA+AGG | 0.456099 | 2_3:-21702622 | Msa0283950:CDS |
| TTAGCTAGGTCTGTCTTGCT+TGG | 0.458979 | 2_3:-21702215 | Msa0283950:exon |
| AAAACTGTTGTCAACCTCTC+TGG | 0.459812 | 2_3:-21702965 | Msa0283950:CDS |
| TGCATTCTTTGTCAATCTGC+AGG | 0.462188 | 2_3:+21702556 | None:intergenic |
| GGATTACACGATTTGATTCA+CGG | 0.464996 | 2_3:+21703647 | None:intergenic |
| GGCAGGGTCCTTACAGTTCA+CGG | 0.470147 | 2_3:-21702414 | Msa0283950:intron |
| CAGATTATTTACCATGATGA+AGG | 0.473810 | 2_3:+21702116 | None:intergenic |
| GAACACTATCTCAAAGTCAA+TGG | 0.475768 | 2_3:-21705858 | Msa0283950:exon |
| GGAATTGATTGAATGAAAAC+GGG | 0.478278 | 2_3:+21706254 | None:intergenic |
| CTCCCCAATAGTTACCATAC+TGG | 0.479957 | 2_3:+21703704 | None:intergenic |
| AACTCGTGCGCACTTTGAAC+GGG | 0.480762 | 2_3:+21702372 | None:intergenic |
| TTGGAAAGAATTACGAATGA+GGG | 0.484481 | 2_3:-21702893 | Msa0283950:CDS |
| AAGAATATTATAGGAAAATG+AGG | 0.485317 | 2_3:+21702183 | None:intergenic |
| GACATTGTTATCTTATGTCA+TGG | 0.489805 | 2_3:-21705642 | Msa0283950:CDS |
| AAACTCGTGCGCACTTTGAA+CGG | 0.492795 | 2_3:+21702371 | None:intergenic |
| CCATAATCAGTAATGTCACT+TGG | 0.493297 | 2_3:+21702155 | None:intergenic |
| GGAAAGTTTAATGGATCGCA+TGG | 0.504200 | 2_3:-21702601 | Msa0283950:CDS |
| GAAACCATTGACCCTAATAA+GGG | 0.504416 | 2_3:-21702243 | Msa0283950:CDS |
| TACTATGTCCAACAATTGCA+CGG | 0.505039 | 2_3:+21703626 | None:intergenic |
| TAATAAGGGCACTGTTAGCT+AGG | 0.506345 | 2_3:-21702229 | Msa0283950:exon |
| TGGTAACTATTGGGGAGAGA+TGG | 0.507786 | 2_3:-21703698 | Msa0283950:CDS |
| TTTGGAAAGAATTACGAATG+AGG | 0.521449 | 2_3:-21702894 | Msa0283950:CDS |
| TAATTCAAACACCTTCATCA+TGG | 0.522005 | 2_3:-21702127 | Msa0283950:three_prime_UTR |
| CGGGAAACAACTCGGATCGA+AGG | 0.530608 | 2_3:+21706273 | None:intergenic |
| CAGAAGAACCGTGAACTGTA+AGG | 0.532860 | 2_3:+21702406 | None:intergenic |
| AGTTGTTATGAGCTTCATCA+AGG | 0.533763 | 2_3:-21702265 | Msa0283950:CDS |
| GCAATTGTTGGACATAGTAA+AGG | 0.544207 | 2_3:-21703622 | Msa0283950:intron |
| CTCTGGACGTTATGATCTGA+AGG | 0.550517 | 2_3:-21702948 | Msa0283950:CDS |
| GGACGTTATGATCTGAAGGC+AGG | 0.563099 | 2_3:-21702944 | Msa0283950:CDS |
| GACATAAGATAACAATGTCG+TGG | 0.564350 | 2_3:+21705646 | None:intergenic |
| CGAGTGAATCGCAATGAACA+AGG | 0.572115 | 2_3:+21706186 | None:intergenic |
| ATGGATTCTACAATCATGAC+AGG | 0.573627 | 2_3:-21705839 | Msa0283950:intron |
| TTTCCAAATAATCTTTACCA+AGG | 0.575682 | 2_3:+21702909 | None:intergenic |
| TTTCATTCAATCAATTCCGC+CGG | 0.577261 | 2_3:-21706249 | Msa0283950:five_prime_UTR |
| GGTATTATCACTCTCTGATG+AGG | 0.579146 | 2_3:+21705720 | None:intergenic |
| CATTTCCAGAAAAGTCAAAA+CGG | 0.584654 | 2_3:+21705445 | None:intergenic |
| TGCAGATTGACAAAGAATGC+AGG | 0.585351 | 2_3:-21702554 | Msa0283950:intron |
| TCGAAGGAATTCGGAGAACG+AGG | 0.589553 | 2_3:+21706289 | None:intergenic |
| GCAGGCATCGAAGAACGCCT+TGG | 0.591925 | 2_3:-21702926 | Msa0283950:CDS |
| TTCCAGTATGGTAACTATTG+GGG | 0.594109 | 2_3:-21703706 | Msa0283950:CDS |
| ATATTAGGATACCAATCTCA+TGG | 0.596638 | 2_3:-21705511 | Msa0283950:intron |
| AATGAAAACGGGAAACAACT+CGG | 0.603006 | 2_3:+21706265 | None:intergenic |
| GTTGGTATATTACATGAATG+TGG | 0.604507 | 2_3:-21705675 | Msa0283950:CDS |
| TCACTCGTTCAATCTCGAAA+CGG | 0.611635 | 2_3:-21706170 | Msa0283950:intron |
| ACATAAGATAACAATGTCGT+GGG | 0.618262 | 2_3:+21705647 | None:intergenic |
| GTGATAATACCCAACAAGCG+CGG | 0.627473 | 2_3:-21705708 | Msa0283950:CDS |
| CGAAGGAATTCGGAGAACGA+GGG | 0.630866 | 2_3:+21706290 | None:intergenic |
| TTAAACTTTCCTTAGTAACA+CGG | 0.641846 | 2_3:+21702613 | None:intergenic |
| TCGATTAGGATTCAGATCGC+CGG | 0.647415 | 2_3:+21706230 | None:intergenic |
| GAAAGTTTAATGGATCGCAT+GGG | 0.653917 | 2_3:-21702600 | Msa0283950:CDS |
| TTACCTTCCAGGGAAAGCGA+AGG | 0.663121 | 2_3:-21703733 | Msa0283950:intron |
| ATTAGGATTCAGATCGCCGG+CGG | 0.678477 | 2_3:+21706233 | None:intergenic |
| GATGAAGCTCATAACAACTG+AGG | 0.686040 | 2_3:+21702269 | None:intergenic |
| TCAGATCATAACGTCCAGAG+AGG | 0.713623 | 2_3:+21702951 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTATTTTTTTTGTATATT+AGG | - | chr2_3:21702848-21702867 | Msa0283950:intron | 10.0% |
| !!! | TCCTTATAATAATTTTATTT+TGG | - | chr2_3:21704451-21704470 | Msa0283950:intron | 10.0% |
| !! | ACCAAAATAAAATTATTATA+AGG | + | chr2_3:21704455-21704474 | None:intergenic | 10.0% |
| !! | AATAATCAATGAAAATAATC+TGG | + | chr2_3:21702835-21702854 | None:intergenic | 15.0% |
| !! | AATTGAATATTAACTCAATA+TGG | + | chr2_3:21702987-21703006 | None:intergenic | 15.0% |
| !!! | ATATTCAATTTTACTATGTT+TGG | - | chr2_3:21702997-21703016 | Msa0283950:CDS | 15.0% |
| !! | GATCAATTAAAATCAATAAA+TGG | + | chr2_3:21703062-21703081 | None:intergenic | 15.0% |
| !! | ATTAGTTATTTATGATTAAC+AGG | + | chr2_3:21704344-21704363 | None:intergenic | 15.0% |
| !!! | AATTTTATTTTGGTATTAGA+TGG | - | chr2_3:21704461-21704480 | Msa0283950:intron | 15.0% |
| !! | ACTTATAAGTCGAAATAAAA+AGG | + | chr2_3:21702788-21702807 | None:intergenic | 20.0% |
| !! | TTGATGAATATGAATGAAAT+GGG | + | chr2_3:21703513-21703532 | None:intergenic | 20.0% |
| !! | TTTGATGAATATGAATGAAA+TGG | + | chr2_3:21703514-21703533 | None:intergenic | 20.0% |
| !!! | AGTTTTAATGTCATGATATT+TGG | + | chr2_3:21705395-21705414 | None:intergenic | 20.0% |
| !! | GATTATTAAATGATCATTTG+AGG | - | chr2_3:21705709-21705728 | Msa0283950:CDS | 20.0% |
| !! | TAACTTGATAAGTTTATCAA+GGG | + | chr2_3:21705898-21705917 | None:intergenic | 20.0% |
| !! | ATAACTTGATAAGTTTATCA+AGG | + | chr2_3:21705899-21705918 | None:intergenic | 20.0% |
| !! | AAGAATATTATAGGAAAATG+AGG | + | chr2_3:21706194-21706213 | None:intergenic | 20.0% |
| !! | TTGGAAAACAAGAATATTAT+AGG | + | chr2_3:21706203-21706222 | None:intergenic | 20.0% |
| !! | AATATCAACCAGTTCAATTT+TGG | + | chr2_3:21702386-21702405 | None:intergenic | 25.0% |
| ! | AGTCGAAATAAAAAGGAAAA+AGG | + | chr2_3:21702781-21702800 | None:intergenic | 25.0% |
| ! | CAATGAAAATAATCTGGTAA+AGG | + | chr2_3:21702829-21702848 | None:intergenic | 25.0% |
| ! | GAACTATACTACAAATAGAT+AGG | - | chr2_3:21703110-21703129 | Msa0283950:intron | 25.0% |
| ! | AAGCTGAGAAATATAGAAAA+TGG | - | chr2_3:21703137-21703156 | Msa0283950:intron | 25.0% |
| !!! | AGTTTAATATTGGTTCAGTT+TGG | + | chr2_3:21703233-21703252 | None:intergenic | 25.0% |
| !! | CATCTTTTTCTTTTCTTTTC+TGG | + | chr2_3:21703870-21703889 | None:intergenic | 25.0% |
| ! | CATATTCATCCATCTATTTA+AGG | + | chr2_3:21704209-21704228 | None:intergenic | 25.0% |
| ! | AACGAAAGAAAATGATTAAC+AGG | + | chr2_3:21704309-21704328 | None:intergenic | 25.0% |
| ! | AGAAATTACTCTTACAATAG+CGG | - | chr2_3:21704369-21704388 | Msa0283950:intron | 25.0% |
| !!! | GGTTGTTAGTTTAGAATTTT+CGG | - | chr2_3:21704390-21704409 | Msa0283950:intron | 25.0% |
| !!! | TTTTGGTTTATAGAGAAAAG+CGG | + | chr2_3:21704905-21704924 | None:intergenic | 25.0% |
| ! | ATAATGATCAAGTTCATATC+TGG | + | chr2_3:21705158-21705177 | None:intergenic | 25.0% |
| ! | TTTCCAAATAATCTTTACCA+AGG | + | chr2_3:21705468-21705487 | None:intergenic | 25.0% |
| ! | TTAAACTTTCCTTAGTAACA+CGG | + | chr2_3:21705764-21705783 | None:intergenic | 25.0% |
| ! | TGTTACTAAGGAAAGTTTAA+TGG | - | chr2_3:21705764-21705783 | Msa0283950:intron | 25.0% |
| ! | ATGCCAAATTACATCATATA+TGG | - | chr2_3:21705939-21705958 | Msa0283950:intron | 25.0% |
| ! | AAATTACATCATATATGGCA+GGG | - | chr2_3:21705944-21705963 | Msa0283950:intron | 25.0% |
| ! | TCTGGATGAAGATATTAAAT+AGG | - | chr2_3:21706277-21706296 | Msa0283950:five_prime_UTR | 25.0% |
| ! | CTGGATGAAGATATTAAATA+GGG | - | chr2_3:21706278-21706297 | Msa0283950:five_prime_UTR | 25.0% |
| GGAATTGATTGAATGAAAAC+GGG | + | chr2_3:21702123-21702142 | None:intergenic | 30.0% | |
| CGGAATTGATTGAATGAAAA+CGG | + | chr2_3:21702124-21702143 | None:intergenic | 30.0% | |
| !!! | CTTTGTTTCTGGATGATTTT+CGG | - | chr2_3:21702353-21702372 | Msa0283950:CDS | 30.0% |
| !!! | ACCAGTTCAATTTTGGTTTA+GGG | + | chr2_3:21702379-21702398 | None:intergenic | 30.0% |
| !!! | AACCAGTTCAATTTTGGTTT+AGG | + | chr2_3:21702380-21702399 | None:intergenic | 30.0% |
| TATTAAGCGCGATTAGTATT+TGG | - | chr2_3:21702402-21702421 | Msa0283950:CDS | 30.0% | |
| ! | ATTACACTCTGTTTGGATTT+TGG | - | chr2_3:21702430-21702449 | Msa0283950:intron | 30.0% |
| TTCTGAATATTCCGTTGTTT+AGG | - | chr2_3:21702467-21702486 | Msa0283950:intron | 30.0% | |
| TGTCAATTTGACCTAAACAA+CGG | + | chr2_3:21702481-21702500 | None:intergenic | 30.0% | |
| GTTGGTATATTACATGAATG+TGG | - | chr2_3:21702699-21702718 | Msa0283950:intron | 30.0% | |
| ACATAAGATAACAATGTCGT+GGG | + | chr2_3:21702730-21702749 | None:intergenic | 30.0% | |
| GACATTGTTATCTTATGTCA+TGG | - | chr2_3:21702732-21702751 | Msa0283950:intron | 30.0% | |
| ATATTAGGATACCAATCTCA+TGG | - | chr2_3:21702863-21702882 | Msa0283950:intron | 30.0% | |
| CATTTCCAGAAAAGTCAAAA+CGG | + | chr2_3:21702932-21702951 | None:intergenic | 30.0% | |
| !!! | GTTTTGACTTTTCTGGAAAT+GGG | - | chr2_3:21702931-21702950 | Msa0283950:CDS | 30.0% |
| TATGTTTGGATGTATAGAGA+TGG | - | chr2_3:21703011-21703030 | Msa0283950:CDS | 30.0% | |
| AGAATGAATTGAACCCAAAT+TGG | - | chr2_3:21703336-21703355 | Msa0283950:intron | 30.0% | |
| CAATGAATTTGGTCCAATTT+GGG | + | chr2_3:21703352-21703371 | None:intergenic | 30.0% | |
| ! | TCAATTTCATATGCCTTTTG+AGG | - | chr2_3:21703541-21703560 | Msa0283950:intron | 30.0% |
| !!! | TCTGGTTTTTATGTGTGTTT+CGG | - | chr2_3:21703581-21703600 | Msa0283950:intron | 30.0% |
| TTTATTAGATTTCAGACCCA+TGG | - | chr2_3:21703796-21703815 | Msa0283950:intron | 30.0% | |
| !! | TTTTGAAAACCAGTTCAGTT+TGG | - | chr2_3:21703939-21703958 | Msa0283950:intron | 30.0% |
| TGGTTCAAACTATTGCATTA+TGG | - | chr2_3:21703959-21703978 | Msa0283950:intron | 30.0% | |
| ! | ATTATGGTTCAGTTCAGTTT+TGG | - | chr2_3:21703975-21703994 | Msa0283950:intron | 30.0% |
| !! | ATGTTTTTAAGCACACCAAA+CGG | + | chr2_3:21704088-21704107 | None:intergenic | 30.0% |
| !! | TTTCTCTTAACTTTAGCTTG+TGG | - | chr2_3:21704617-21704636 | Msa0283950:intron | 30.0% |
| ! | AACAGTTCACGTCATAATTT+TGG | + | chr2_3:21704922-21704941 | None:intergenic | 30.0% |
| CTCTTCATATTGCATATTCA+AGG | + | chr2_3:21704992-21705011 | None:intergenic | 30.0% | |
| ACAAGTTTGGATACGAAATT+AGG | + | chr2_3:21705079-21705098 | None:intergenic | 30.0% | |
| ! | CTTATTGACTACTAATCTCA+TGG | + | chr2_3:21705103-21705122 | None:intergenic | 30.0% |
| TTTGGAAAGAATTACGAATG+AGG | - | chr2_3:21705480-21705499 | Msa0283950:CDS | 30.0% | |
| TTGGAAAGAATTACGAATGA+GGG | - | chr2_3:21705481-21705500 | Msa0283950:CDS | 30.0% | |
| TAAGTTTATCAAGGGAGAAA+TGG | + | chr2_3:21705890-21705909 | None:intergenic | 30.0% | |
| CTGCCATATATGATGTAATT+TGG | + | chr2_3:21705945-21705964 | None:intergenic | 30.0% | |
| CAAATTACATCATATATGGC+AGG | - | chr2_3:21705943-21705962 | Msa0283950:intron | 30.0% | |
| ATGATATGCAACTTGTGATT+TGG | + | chr2_3:21706041-21706060 | None:intergenic | 30.0% | |
| TAATTCAAACACCTTCATCA+TGG | - | chr2_3:21706247-21706266 | Msa0283950:five_prime_UTR | 30.0% | |
| CAGATTATTTACCATGATGA+AGG | + | chr2_3:21706261-21706280 | None:intergenic | 30.0% | |
| CTTCATCATGGTAAATAATC+TGG | - | chr2_3:21706259-21706278 | Msa0283950:five_prime_UTR | 30.0% | |
| AATGAAAACGGGAAACAACT+CGG | + | chr2_3:21702112-21702131 | None:intergenic | 35.0% | |
| TTTCATTCAATCAATTCCGC+CGG | - | chr2_3:21702125-21702144 | Msa0283950:three_prime_UTR | 35.0% | |
| TGGTTGGAGAACAAAGTTAA+CGG | - | chr2_3:21702236-21702255 | Msa0283950:CDS | 35.0% | |
| ! | TCTTGATTCGTCAAATTCAG+TGG | - | chr2_3:21702301-21702320 | Msa0283950:CDS | 35.0% |
| GAACACTATCTCAAAGTCAA+TGG | - | chr2_3:21702516-21702535 | Msa0283950:intron | 35.0% | |
| ATGGATTCTACAATCATGAC+AGG | - | chr2_3:21702535-21702554 | Msa0283950:intron | 35.0% | |
| !!! | CTCTCATTTGTTTTTGTAGC+TGG | - | chr2_3:21702627-21702646 | Msa0283950:CDS | 35.0% |
| GACATAAGATAACAATGTCG+TGG | + | chr2_3:21702731-21702750 | None:intergenic | 35.0% | |
| !!! | TCTTTCCGTTTTGACTTTTC+TGG | - | chr2_3:21702924-21702943 | Msa0283950:CDS | 35.0% |
| !!! | CGTTTTGACTTTTCTGGAAA+TGG | - | chr2_3:21702930-21702949 | Msa0283950:CDS | 35.0% |
| !!! | ACAAACATTTTGACTGCACA+TGG | + | chr2_3:21703084-21703103 | None:intergenic | 35.0% |
| TGTATCCGTCCAAACATAAA+TGG | + | chr2_3:21703169-21703188 | None:intergenic | 35.0% | |
| GGATACATGTATTCTCAGTA+GGG | - | chr2_3:21703182-21703201 | Msa0283950:intron | 35.0% | |
| GATACATGTATTCTCAGTAG+GGG | - | chr2_3:21703183-21703202 | Msa0283950:intron | 35.0% | |
| !! | GTTCAGTTTGGTTCAGTTTT+TGG | + | chr2_3:21703221-21703240 | None:intergenic | 35.0% |
| CACACGGTTCAGTTTAATAT+TGG | + | chr2_3:21703243-21703262 | None:intergenic | 35.0% | |
| ! | CAGTCTTGAACTTTTACACA+CGG | + | chr2_3:21703259-21703278 | None:intergenic | 35.0% |
| GCAATGAATTTGGTCCAATT+TGG | + | chr2_3:21703353-21703372 | None:intergenic | 35.0% | |
| TATGAATGAAATGGGTACCT+CGG | + | chr2_3:21703505-21703524 | None:intergenic | 35.0% | |
| ! | ATAGCTAGGGGTTTGAATTT+TGG | - | chr2_3:21703768-21703787 | Msa0283950:intron | 35.0% |
| TAGTTTGAACCAAACTGAAC+TGG | + | chr2_3:21703951-21703970 | None:intergenic | 35.0% | |
| !! | TGTTTTTAAGCACACCAAAC+GGG | + | chr2_3:21704087-21704106 | None:intergenic | 35.0% |
| !! | TGACATTCACATTGACTCAT+TGG | - | chr2_3:21704118-21704137 | Msa0283950:intron | 35.0% |
| TGAATGTAGAAATTTGTGCC+AGG | - | chr2_3:21704171-21704190 | Msa0283950:intron | 35.0% | |
| CTGAACATGCCTTAAATAGA+TGG | - | chr2_3:21704197-21704216 | Msa0283950:intron | 35.0% | |
| TCTGTTTGATGCGATTTCTT+TGG | - | chr2_3:21704269-21704288 | Msa0283950:intron | 35.0% | |
| ! | TCATTCACTATTTCTTTGCC+TGG | - | chr2_3:21704507-21704526 | Msa0283950:intron | 35.0% |
| TTTCTTTGCCTGGTGTAAAT+TGG | - | chr2_3:21704517-21704536 | Msa0283950:intron | 35.0% | |
| AATACCATCCAATTTACACC+AGG | + | chr2_3:21704528-21704547 | None:intergenic | 35.0% | |
| CATAGCTAACAATGAAGACA+AGG | + | chr2_3:21704584-21704603 | None:intergenic | 35.0% | |
| GTTCCAGTATGGTAACTATT+GGG | - | chr2_3:21704667-21704686 | Msa0283950:intron | 35.0% | |
| TTCCAGTATGGTAACTATTG+GGG | - | chr2_3:21704668-21704687 | Msa0283950:intron | 35.0% | |
| GGATTACACGATTTGATTCA+CGG | + | chr2_3:21704730-21704749 | None:intergenic | 35.0% | |
| TACTATGTCCAACAATTGCA+CGG | + | chr2_3:21704751-21704770 | None:intergenic | 35.0% | |
| GCAATTGTTGGACATAGTAA+AGG | - | chr2_3:21704752-21704771 | Msa0283950:intron | 35.0% | |
| !! | TTGGACATAGTAAAGGTATC+TGG | - | chr2_3:21704759-21704778 | Msa0283950:intron | 35.0% |
| CAATCTTAACATCCAAAGCA+GGG | + | chr2_3:21704966-21704985 | None:intergenic | 35.0% | |
| CTAATCTCATGGTACAAGTT+TGG | + | chr2_3:21705092-21705111 | None:intergenic | 35.0% | |
| ! | CAGAATTTGAGATCATGGAT+TGG | + | chr2_3:21705277-21705296 | None:intergenic | 35.0% |
| ATCCATGATCTCAAATTCTG+AGG | - | chr2_3:21705277-21705296 | Msa0283950:intron | 35.0% | |
| CCTAAACAAATTTGCGTGAA+AGG | + | chr2_3:21705304-21705323 | None:intergenic | 35.0% | |
| ! | CCTTTCACGCAAATTTGTTT+AGG | - | chr2_3:21705301-21705320 | Msa0283950:intron | 35.0% |
| ! | GCAAATTTGTTTAGGCTGAT+TGG | - | chr2_3:21705309-21705328 | Msa0283950:intron | 35.0% |
| ACGCCTTGGTAAAGATTATT+TGG | - | chr2_3:21705462-21705481 | Msa0283950:CDS | 35.0% | |
| ! | TTTGGATTACCGTGTTACTA+AGG | - | chr2_3:21705752-21705771 | Msa0283950:intron | 35.0% |
| ! | GAAAGTTTAATGGATCGCAT+GGG | - | chr2_3:21705774-21705793 | Msa0283950:intron | 35.0% |
| ATTGACAAAGAATGCAGGTT+AGG | - | chr2_3:21705825-21705844 | Msa0283950:intron | 35.0% | |
| TTGACAAAGAATGCAGGTTA+GGG | - | chr2_3:21705826-21705845 | Msa0283950:intron | 35.0% | |
| GAAATGGAGCTAGAAGTAAA+AGG | + | chr2_3:21705874-21705893 | None:intergenic | 35.0% | |
| ATGACTACTGTATGCATGAT+TGG | + | chr2_3:21706072-21706091 | None:intergenic | 35.0% | |
| AGTTGTTATGAGCTTCATCA+AGG | - | chr2_3:21706109-21706128 | Msa0283950:intron | 35.0% | |
| GAAACCATTGACCCTAATAA+GGG | - | chr2_3:21706131-21706150 | Msa0283950:intron | 35.0% | |
| CCATAATCAGTAATGTCACT+TGG | + | chr2_3:21706222-21706241 | None:intergenic | 35.0% | |
| ! | CCAAGTGACATTACTGATTA+TGG | - | chr2_3:21706219-21706238 | Msa0283950:five_prime_UTR | 35.0% |
| TCACTCGTTCAATCTCGAAA+CGG | - | chr2_3:21702204-21702223 | Msa0283950:three_prime_UTR | 40.0% | |
| ! | CGTGAAAAGCTCTTTGTTTC+TGG | - | chr2_3:21702342-21702361 | Msa0283950:CDS | 40.0% |
| GCCCTAAACCAAAATTGAAC+TGG | - | chr2_3:21702375-21702394 | Msa0283950:CDS | 40.0% | |
| ! | GGCTTTGATTACACTCTGTT+TGG | - | chr2_3:21702423-21702442 | Msa0283950:intron | 40.0% |
| ATTGACACTCTCACACTCTA+AGG | - | chr2_3:21702494-21702513 | Msa0283950:intron | 40.0% | |
| GGTATTATCACTCTCTGATG+AGG | + | chr2_3:21702657-21702676 | None:intergenic | 40.0% | |
| ! | TGGACCATGCCATTTATGTT+TGG | - | chr2_3:21703157-21703176 | Msa0283950:intron | 40.0% |
| ! | CCATGCCATTTATGTTTGGA+CGG | - | chr2_3:21703161-21703180 | Msa0283950:intron | 40.0% |
| CGGATACATGTATTCTCAGT+AGG | - | chr2_3:21703181-21703200 | Msa0283950:intron | 40.0% | |
| TCGCAAGAGAGCAATGAATT+TGG | + | chr2_3:21703363-21703382 | None:intergenic | 40.0% | |
| ! | TTTTATGTGTGTTTCGGCTG+TGG | - | chr2_3:21703587-21703606 | Msa0283950:intron | 40.0% |
| TTTATGTGTGTTTCGGCTGT+GGG | - | chr2_3:21703588-21703607 | Msa0283950:intron | 40.0% | |
| ATGACAGAACAGCAGCTATT+GGG | - | chr2_3:21703643-21703662 | Msa0283950:CDS | 40.0% | |
| !!! | CAGTAGCTGTTTTCTGGTTT+GGG | - | chr2_3:21703711-21703730 | Msa0283950:CDS | 40.0% |
| GGAACAAAAACCAAACAGCA+AGG | + | chr2_3:21703828-21703847 | None:intergenic | 40.0% | |
| !! | GTTCAGTTTTGGCACAGTTT+TGG | - | chr2_3:21703986-21704005 | Msa0283950:intron | 40.0% |
| CCTAACGATCCTGAGAATTA+GGG | + | chr2_3:21704033-21704052 | None:intergenic | 40.0% | |
| TCCTAACGATCCTGAGAATT+AGG | + | chr2_3:21704034-21704053 | None:intergenic | 40.0% | |
| GTCAATGTGAATGTCAACAC+AGG | + | chr2_3:21704114-21704133 | None:intergenic | 40.0% | |
| !! | TTCACATTGACTCATTGGCA+CGG | - | chr2_3:21704123-21704142 | Msa0283950:intron | 40.0% |
| TTTGCCTGGTGTAAATTGGA+TGG | - | chr2_3:21704521-21704540 | Msa0283950:intron | 40.0% | |
| CGTTCCAGTATGGTAACTAT+TGG | - | chr2_3:21704666-21704685 | Msa0283950:intron | 40.0% | |
| !! | CGGGTAGCAACACTTTATTT+TGG | + | chr2_3:21704879-21704898 | None:intergenic | 40.0% |
| TTTATAGAGAAAAGCGGCTG+CGG | + | chr2_3:21704899-21704918 | None:intergenic | 40.0% | |
| ATTTCATGTCAACCCTGCTT+TGG | - | chr2_3:21704951-21704970 | Msa0283950:intron | 40.0% | |
| GCAATCTTAACATCCAAAGC+AGG | + | chr2_3:21704967-21704986 | None:intergenic | 40.0% | |
| GATCAAGTTCATATCTGGCA+CGG | + | chr2_3:21705153-21705172 | None:intergenic | 40.0% | |
| ! | GACCTCAGAATTTGAGATCA+TGG | + | chr2_3:21705282-21705301 | None:intergenic | 40.0% |
| AAAACTGTTGTCAACCTCTC+TGG | - | chr2_3:21705409-21705428 | Msa0283950:intron | 40.0% | |
| ATTGATGTGAAGACGAAGTC+AGG | - | chr2_3:21705508-21705527 | Msa0283950:intron | 40.0% | |
| ATCTACTGTTGCAGGAAGTT+TGG | - | chr2_3:21705734-21705753 | Msa0283950:intron | 40.0% | |
| ! | GGAAAGTTTAATGGATCGCA+TGG | - | chr2_3:21705773-21705792 | Msa0283950:intron | 40.0% |
| TGCATTCTTTGTCAATCTGC+AGG | + | chr2_3:21705821-21705840 | None:intergenic | 40.0% | |
| TGCAGATTGACAAAGAATGC+AGG | - | chr2_3:21705820-21705839 | Msa0283950:intron | 40.0% | |
| TGACAAAGAATGCAGGTTAG+GGG | - | chr2_3:21705827-21705846 | Msa0283950:intron | 40.0% | |
| GATGAAGCTCATAACAACTG+AGG | + | chr2_3:21706108-21706127 | None:intergenic | 40.0% | |
| GGAAACCATTGACCCTAATA+AGG | - | chr2_3:21706130-21706149 | Msa0283950:intron | 40.0% | |
| AGCTAACAGTGCCCTTATTA+GGG | + | chr2_3:21706145-21706164 | None:intergenic | 40.0% | |
| TAGCTAACAGTGCCCTTATT+AGG | + | chr2_3:21706146-21706165 | None:intergenic | 40.0% | |
| !! | TAATAAGGGCACTGTTAGCT+AGG | - | chr2_3:21706145-21706164 | Msa0283950:intron | 40.0% |
| CAACTCGGATCGAAGGAATT+CGG | + | chr2_3:21702097-21702116 | None:intergenic | 45.0% | |
| TCGATTAGGATTCAGATCGC+CGG | + | chr2_3:21702147-21702166 | None:intergenic | 45.0% | |
| ! | TTGAGCACTGTCGATCGATT+AGG | + | chr2_3:21702161-21702180 | None:intergenic | 45.0% |
| CGAGTGAATCGCAATGAACA+AGG | + | chr2_3:21702191-21702210 | None:intergenic | 45.0% | |
| TCTCGAAACGGTAAGATGCA+TGG | - | chr2_3:21702216-21702235 | Msa0283950:exon | 45.0% | |
| GAAACGGTAAGATGCATGGT+TGG | - | chr2_3:21702220-21702239 | Msa0283950:exon | 45.0% | |
| ! | CAGTGGCGAATTTGCGATTT+TGG | - | chr2_3:21702318-21702337 | Msa0283950:CDS | 45.0% |
| GTGATAATACCCAACAAGCG+CGG | - | chr2_3:21702666-21702685 | Msa0283950:intron | 45.0% | |
| AACAAGGTTCGCCATGAGAT+TGG | + | chr2_3:21702877-21702896 | None:intergenic | 45.0% | |
| ! | CCTTTTCCAATGCAGCAACA+AGG | + | chr2_3:21702893-21702912 | None:intergenic | 45.0% |
| CCTTGTTGCTGCATTGGAAA+AGG | - | chr2_3:21702890-21702909 | Msa0283950:CDS | 45.0% | |
| CCGTCCAAACATAAATGGCA+TGG | + | chr2_3:21703164-21703183 | None:intergenic | 45.0% | |
| ACATGTATTCTCAGTAGGGG+TGG | - | chr2_3:21703186-21703205 | Msa0283950:intron | 45.0% | |
| CATGTATTCTCAGTAGGGGT+GGG | - | chr2_3:21703187-21703206 | Msa0283950:intron | 45.0% | |
| GAATCGTTATGGAGGGATCA+CGG | + | chr2_3:21703400-21703419 | None:intergenic | 45.0% | |
| CGGAGATGAATCGTTATGGA+GGG | + | chr2_3:21703407-21703426 | None:intergenic | 45.0% | |
| CCTCCATAACGATTCATCTC+CGG | - | chr2_3:21703405-21703424 | Msa0283950:intron | 45.0% | |
| TGACCGGAGATGAATCGTTA+TGG | + | chr2_3:21703411-21703430 | None:intergenic | 45.0% | |
| TGGAGATGAATCACTACGGA+GGG | + | chr2_3:21703471-21703490 | None:intergenic | 45.0% | |
| GCAGTGGAGATGAATCACTA+CGG | + | chr2_3:21703475-21703494 | None:intergenic | 45.0% | |
| AGCAACAGCGTTACCTCAAA+AGG | + | chr2_3:21703557-21703576 | None:intergenic | 45.0% | |
| TTATGTGTGTTTCGGCTGTG+GGG | - | chr2_3:21703589-21703608 | Msa0283950:intron | 45.0% | |
| CATGACAGAACAGCAGCTAT+TGG | - | chr2_3:21703642-21703661 | Msa0283950:CDS | 45.0% | |
| TGACAGAACAGCAGCTATTG+GGG | - | chr2_3:21703644-21703663 | Msa0283950:CDS | 45.0% | |
| !! | CTATTGGGGCTGTTTTCTGT+CGG | - | chr2_3:21703658-21703677 | Msa0283950:CDS | 45.0% |
| !! | GCATCTGTGTGTTGGTGTTT+TGG | - | chr2_3:21703685-21703704 | Msa0283950:CDS | 45.0% |
| !!! | GCAGTAGCTGTTTTCTGGTT+TGG | - | chr2_3:21703710-21703729 | Msa0283950:CDS | 45.0% |
| !! | GGTTGGTTTAGGCATAGCTA+GGG | - | chr2_3:21703755-21703774 | Msa0283950:intron | 45.0% |
| ! | GTTGGTTTAGGCATAGCTAG+GGG | - | chr2_3:21703756-21703775 | Msa0283950:intron | 45.0% |
| GGTGATAGAGAAAGCAAGAC+AGG | + | chr2_3:21703849-21703868 | None:intergenic | 45.0% | |
| TTTGCCCATCCCTAATTCTC+AGG | - | chr2_3:21704021-21704040 | Msa0283950:intron | 45.0% | |
| CGATCCTGAGAATTAGGGAT+GGG | + | chr2_3:21704028-21704047 | None:intergenic | 45.0% | |
| ACGATCCTGAGAATTAGGGA+TGG | + | chr2_3:21704029-21704048 | None:intergenic | 45.0% | |
| CCCTAATTCTCAGGATCGTT+AGG | - | chr2_3:21704030-21704049 | Msa0283950:intron | 45.0% | |
| ACTTTGAACTTGTGCCCGTT+TGG | - | chr2_3:21704070-21704089 | Msa0283950:intron | 45.0% | |
| TTAAGGCATGTTCAGACACC+TGG | + | chr2_3:21704192-21704211 | None:intergenic | 45.0% | |
| ! | TAGCTTGTGGATTACCTTCC+AGG | - | chr2_3:21704630-21704649 | Msa0283950:intron | 45.0% |
| ! | AGCTTGTGGATTACCTTCCA+GGG | - | chr2_3:21704631-21704650 | Msa0283950:intron | 45.0% |
| CTCCCCAATAGTTACCATAC+TGG | + | chr2_3:21704673-21704692 | None:intergenic | 45.0% | |
| TGGTAACTATTGGGGAGAGA+TGG | - | chr2_3:21704676-21704695 | Msa0283950:intron | 45.0% | |
| CGTGTAATCCGTGCAATTGT+TGG | - | chr2_3:21704740-21704759 | Msa0283950:intron | 45.0% | |
| GCAGCACTAAAAGACAGCTT+TGG | + | chr2_3:21704851-21704870 | None:intergenic | 45.0% | |
| TTATAGAGAAAAGCGGCTGC+GGG | + | chr2_3:21704898-21704917 | None:intergenic | 45.0% | |
| ! | TATCTGGCACGGTTTTGCAA+AGG | + | chr2_3:21705142-21705161 | None:intergenic | 45.0% |
| TCAGATCATAACGTCCAGAG+AGG | + | chr2_3:21705426-21705445 | None:intergenic | 45.0% | |
| CTCTGGACGTTATGATCTGA+AGG | - | chr2_3:21705426-21705445 | Msa0283950:intron | 45.0% | |
| TTGAGGACATCTACTGTTGC+AGG | - | chr2_3:21705726-21705745 | Msa0283950:CDS | 45.0% | |
| CAGAAGAACCGTGAACTGTA+AGG | + | chr2_3:21705971-21705990 | None:intergenic | 45.0% | |
| AAACTCGTGCGCACTTTGAA+CGG | + | chr2_3:21706006-21706025 | None:intergenic | 45.0% | |
| AGTGCCCTTATTAGGGTCAA+TGG | + | chr2_3:21706138-21706157 | None:intergenic | 45.0% | |
| TTAGCTAGGTCTGTCTTGCT+TGG | - | chr2_3:21706159-21706178 | Msa0283950:intron | 45.0% | |
| CGAAGGAATTCGGAGAACGA+GGG | + | chr2_3:21702087-21702106 | None:intergenic | 50.0% | |
| TCGAAGGAATTCGGAGAACG+AGG | + | chr2_3:21702088-21702107 | None:intergenic | 50.0% | |
| ATTAGGATTCAGATCGCCGG+CGG | + | chr2_3:21702144-21702163 | None:intergenic | 50.0% | |
| ! | AGTTTTTCGCCGCGCTTGTT+GGG | + | chr2_3:21702678-21702697 | None:intergenic | 50.0% |
| ! | AAGTTTTTCGCCGCGCTTGT+TGG | + | chr2_3:21702679-21702698 | None:intergenic | 50.0% |
| AAGCGCGGCGAAAAACTTGT+TGG | - | chr2_3:21702681-21702700 | Msa0283950:intron | 50.0% | |
| !!! | GGGATCACGGTTTTGTTGGA+TGG | + | chr2_3:21703387-21703406 | None:intergenic | 50.0% |
| !! | TGGAGGGATCACGGTTTTGT+TGG | + | chr2_3:21703391-21703410 | None:intergenic | 50.0% |
| CCGGAGATGAATCGTTATGG+AGG | + | chr2_3:21703408-21703427 | None:intergenic | 50.0% | |
| GTGGAGATGAATCACTACGG+AGG | + | chr2_3:21703472-21703491 | None:intergenic | 50.0% | |
| !! | TGGCTGCAGTAGCTGTTTTC+TGG | - | chr2_3:21703705-21703724 | Msa0283950:CDS | 50.0% |
| !! | TTCTGGTTTGGGAGCTGTGA+TGG | - | chr2_3:21703722-21703741 | Msa0283950:CDS | 50.0% |
| !! | TCTGGTTTGGGAGCTGTGAT+GGG | - | chr2_3:21703723-21703742 | Msa0283950:CDS | 50.0% |
| !! | GGGTTGGTTTAGGCATAGCT+AGG | - | chr2_3:21703754-21703773 | Msa0283950:intron | 50.0% |
| AACAGCAAGGCAACAGCCAT+GGG | + | chr2_3:21703815-21703834 | None:intergenic | 50.0% | |
| AAACAGCAAGGCAACAGCCA+TGG | + | chr2_3:21703816-21703835 | None:intergenic | 50.0% | |
| !! | ATGGCTGTTGCCTTGCTGTT+TGG | - | chr2_3:21703815-21703834 | Msa0283950:intron | 50.0% |
| TTACCTTCCAGGGAAAGCGA+AGG | - | chr2_3:21704641-21704660 | Msa0283950:intron | 50.0% | |
| AGCGAAGGTTCGTTCCAGTA+TGG | - | chr2_3:21704656-21704675 | Msa0283950:intron | 50.0% | |
| TTGCTTCTGTGTCGTGATGC+AGG | - | chr2_3:21705343-21705362 | Msa0283950:intron | 50.0% | |
| GGACGTTATGATCTGAAGGC+AGG | - | chr2_3:21705430-21705449 | Msa0283950:intron | 50.0% | |
| AACTCGTGCGCACTTTGAAC+GGG | + | chr2_3:21706005-21706024 | None:intergenic | 50.0% | |
| CGGGAAACAACTCGGATCGA+AGG | + | chr2_3:21702104-21702123 | None:intergenic | 55.0% | |
| GGCGAACCTTGTTGCTGCAT+TGG | - | chr2_3:21702884-21702903 | Msa0283950:CDS | 55.0% | |
| TGTCGTGATCCCTCCATCTC+CGG | - | chr2_3:21703432-21703451 | Msa0283950:intron | 55.0% | |
| GTAACGCTGTTGCTGTCGTC+TGG | - | chr2_3:21703563-21703582 | Msa0283950:intron | 55.0% | |
| TCGGCTGTGCATCTGTGTGT+TGG | - | chr2_3:21703677-21703696 | Msa0283950:CDS | 55.0% | |
| !! | CTGGTTTGGGAGCTGTGATG+GGG | - | chr2_3:21703724-21703743 | Msa0283950:CDS | 55.0% |
| GAACCTTCGCTTTCCCTGGA+AGG | + | chr2_3:21704647-21704666 | None:intergenic | 55.0% | |
| GAACGAACCTTCGCTTTCCC+TGG | + | chr2_3:21704651-21704670 | None:intergenic | 55.0% | |
| CTTCTGTGTCGTGATGCAGG+AGG | - | chr2_3:21705346-21705365 | Msa0283950:intron | 55.0% | |
| GGCAGGGTCCTTACAGTTCA+CGG | - | chr2_3:21705960-21705979 | Msa0283950:intron | 55.0% | |
| GGAGGGATCACGACAGTGAC+CGG | + | chr2_3:21703427-21703446 | None:intergenic | 60.0% | |
| TCACTACGGAGGGATCCCGA+CGG | + | chr2_3:21703461-21703480 | None:intergenic | 60.0% | |
| TGTGTGTTTCGGCTGTGGGG+TGG | - | chr2_3:21703592-21703611 | Msa0283950:intron | 60.0% | |
| ! | GAGCTGTGATGGGGCTGTTG+CGG | - | chr2_3:21703733-21703752 | Msa0283950:intron | 60.0% |
| ! | AGCTGTGATGGGGCTGTTGC+GGG | - | chr2_3:21703734-21703753 | Msa0283950:intron | 60.0% |
| !! | GGGCTGTTGCGGGTTGGTTT+AGG | - | chr2_3:21703744-21703763 | Msa0283950:intron | 60.0% |
| !! | GCAGGCATCGAAGAACGCCT+TGG | - | chr2_3:21705448-21705467 | Msa0283950:CDS | 60.0% |
| CGACGGTGACCGGAGATGGA+GGG | + | chr2_3:21703444-21703463 | None:intergenic | 65.0% | |
| CCTCCATCTCCGGTCACCGT+CGG | - | chr2_3:21703442-21703461 | Msa0283950:intron | 65.0% | |
| CTCCATCTCCGGTCACCGTC+GGG | - | chr2_3:21703443-21703462 | Msa0283950:intron | 65.0% | |
| ATCCCGACGGTGACCGGAGA+TGG | + | chr2_3:21703448-21703467 | None:intergenic | 65.0% | |
| TCTCCACTGCTGCAGCTCCG+AGG | - | chr2_3:21703485-21703504 | Msa0283950:intron | 65.0% | |
| GTACCTCGGAGCTGCAGCAG+TGG | + | chr2_3:21703491-21703510 | None:intergenic | 65.0% | |
| ! | GTGATGGGGCTGTTGCGGGT+TGG | - | chr2_3:21703738-21703757 | Msa0283950:intron | 65.0% |
| CCGACGGTGACCGGAGATGG+AGG | + | chr2_3:21703445-21703464 | None:intergenic | 70.0% | |
| GGAGGGATCCCGACGGTGAC+CGG | + | chr2_3:21703454-21703473 | None:intergenic | 70.0% | |
| ! | TCGGCTGTGGGGTGGCTTGC+TGG | - | chr2_3:21703600-21703619 | Msa0283950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 21702072 | 21706324 | 21702072 | ID=Msa0283950;Name=Msa0283950 |
| chr2_3 | mRNA | 21702072 | 21706324 | 21702072 | ID=Msa0283950-mRNA-1;Parent=Msa0283950;Name=Msa0283950-mRNA-1;_AED=0.13;_eAED=0.13;_QI=200|1|1|1|0.85|0.75|8|158|270 |
| chr2_3 | exon | 21702072 | 21702431 | 21702072 | ID=Msa0283950-mRNA-1:exon:8473;Parent=Msa0283950-mRNA-1 |
| chr2_3 | exon | 21702555 | 21702648 | 21702555 | ID=Msa0283950-mRNA-1:exon:8472;Parent=Msa0283950-mRNA-1 |
| chr2_3 | exon | 21702867 | 21703031 | 21702867 | ID=Msa0283950-mRNA-1:exon:8471;Parent=Msa0283950-mRNA-1 |
| chr2_3 | exon | 21703623 | 21703744 | 21703623 | ID=Msa0283950-mRNA-1:exon:8470;Parent=Msa0283950-mRNA-1 |
| chr2_3 | exon | 21705444 | 21705526 | 21705444 | ID=Msa0283950-mRNA-1:exon:8469;Parent=Msa0283950-mRNA-1 |
| chr2_3 | exon | 21705626 | 21705750 | 21705626 | ID=Msa0283950-mRNA-1:exon:8468;Parent=Msa0283950-mRNA-1 |
| chr2_3 | exon | 21705840 | 21705907 | 21705840 | ID=Msa0283950-mRNA-1:exon:8467;Parent=Msa0283950-mRNA-1 |
| chr2_3 | exon | 21706171 | 21706324 | 21706171 | ID=Msa0283950-mRNA-1:exon:8466;Parent=Msa0283950-mRNA-1 |
| chr2_3 | five_prime_UTR | 21706171 | 21706324 | 21706171 | ID=Msa0283950-mRNA-1:five_prime_utr;Parent=Msa0283950-mRNA-1 |
| chr2_3 | five_prime_UTR | 21705862 | 21705907 | 21705862 | ID=Msa0283950-mRNA-1:five_prime_utr;Parent=Msa0283950-mRNA-1 |
| chr2_3 | CDS | 21705840 | 21705861 | 21705840 | ID=Msa0283950-mRNA-1:cds;Parent=Msa0283950-mRNA-1 |
| chr2_3 | CDS | 21705626 | 21705750 | 21705626 | ID=Msa0283950-mRNA-1:cds;Parent=Msa0283950-mRNA-1 |
| chr2_3 | CDS | 21705444 | 21705526 | 21705444 | ID=Msa0283950-mRNA-1:cds;Parent=Msa0283950-mRNA-1 |
| chr2_3 | CDS | 21703623 | 21703744 | 21703623 | ID=Msa0283950-mRNA-1:cds;Parent=Msa0283950-mRNA-1 |
| chr2_3 | CDS | 21702867 | 21703031 | 21702867 | ID=Msa0283950-mRNA-1:cds;Parent=Msa0283950-mRNA-1 |
| chr2_3 | CDS | 21702555 | 21702648 | 21702555 | ID=Msa0283950-mRNA-1:cds;Parent=Msa0283950-mRNA-1 |
| chr2_3 | CDS | 21702230 | 21702431 | 21702230 | ID=Msa0283950-mRNA-1:cds;Parent=Msa0283950-mRNA-1 |
| chr2_3 | three_prime_UTR | 21702072 | 21702229 | 21702072 | ID=Msa0283950-mRNA-1:three_prime_utr;Parent=Msa0283950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
