Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0298630 | XP_003596950.1 | 93.223 | 605 | 28 | 4 | 1 | 595 | 1 | 602 | 0.0 | 1043 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0298630 | sp|Q9C519|WRKY6_ARATH | 49.455 | 459 | 184 | 10 | 127 | 564 | 121 | 552 | 5.06e-120 | 369 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0298630 | G7ITV7 | 93.223 | 605 | 28 | 4 | 1 | 595 | 1 | 602 | 0.0 | 1043 |
Gene ID | Type | Classification |
---|---|---|
Msa0298630 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0260900 | Msa0298630 | 0.848302 | 6.683637e-60 | -8.615850e-47 |
Msa0298630 | Msa1085730 | 0.855927 | 4.541689e-62 | -8.615850e-47 |
Msa0298630 | Msa1393310 | 0.850662 | 1.468626e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0298630 | MtrunA17_Chr2g0322391 | 93.223 | 605 | 28 | 4 | 1 | 595 | 1 | 602 | 0.0 | 1043 |
Msa0298630 | MtrunA17_Chr4g0075201 | 49.597 | 496 | 179 | 15 | 75 | 551 | 36 | 479 | 4.96e-123 | 372 |
Msa0298630 | MtrunA17_Chr2g0288871 | 48.343 | 513 | 187 | 19 | 75 | 551 | 62 | 532 | 2.35e-118 | 362 |
Msa0298630 | MtrunA17_Chr4g0025051 | 43.509 | 570 | 232 | 16 | 80 | 587 | 35 | 576 | 7.53e-113 | 349 |
Msa0298630 | MtrunA17_Chr4g0025061 | 41.156 | 571 | 226 | 19 | 58 | 556 | 36 | 568 | 9.98e-111 | 344 |
Msa0298630 | MtrunA17_Chr4g0024391 | 41.903 | 494 | 207 | 13 | 162 | 583 | 1 | 486 | 5.00e-97 | 305 |
Msa0298630 | MtrunA17_Chr3g0099641 | 40.664 | 482 | 207 | 14 | 75 | 548 | 34 | 444 | 5.00e-96 | 301 |
Msa0298630 | MtrunA17_Chr7g0270831 | 37.209 | 516 | 186 | 18 | 76 | 574 | 26 | 420 | 9.66e-78 | 253 |
Msa0298630 | MtrunA17_Chr2g0302391 | 33.820 | 411 | 182 | 11 | 159 | 547 | 66 | 408 | 2.35e-53 | 187 |
Msa0298630 | MtrunA17_Chr7g0216891 | 31.328 | 482 | 230 | 18 | 166 | 573 | 45 | 499 | 9.47e-47 | 173 |
Msa0298630 | MtrunA17_Chr4g0051181 | 42.748 | 262 | 124 | 7 | 326 | 562 | 227 | 487 | 1.56e-42 | 159 |
Msa0298630 | MtrunA17_Chr4g0060271 | 36.397 | 272 | 137 | 6 | 151 | 402 | 60 | 315 | 2.75e-39 | 152 |
Msa0298630 | MtrunA17_Chr5g0419241 | 84.615 | 65 | 7 | 1 | 308 | 372 | 46 | 107 | 1.77e-31 | 117 |
Msa0298630 | MtrunA17_Chr4g0001361 | 31.140 | 228 | 100 | 8 | 319 | 545 | 139 | 310 | 5.21e-26 | 108 |
Msa0298630 | MtrunA17_Chr5g0445311 | 44.628 | 121 | 56 | 3 | 294 | 404 | 306 | 425 | 2.32e-24 | 107 |
Msa0298630 | MtrunA17_Chr3g0101131 | 38.122 | 181 | 83 | 5 | 252 | 404 | 297 | 476 | 2.61e-24 | 107 |
Msa0298630 | MtrunA17_Chr3g0106491 | 54.430 | 79 | 35 | 1 | 324 | 402 | 347 | 424 | 5.17e-24 | 105 |
Msa0298630 | MtrunA17_Chr3g0106491 | 47.619 | 63 | 31 | 2 | 342 | 404 | 198 | 258 | 4.87e-11 | 65.5 |
Msa0298630 | MtrunA17_Chr3g0079691 | 37.423 | 163 | 77 | 3 | 246 | 404 | 415 | 556 | 7.14e-24 | 106 |
Msa0298630 | MtrunA17_Chr3g0079691 | 42.683 | 82 | 44 | 3 | 343 | 423 | 281 | 360 | 3.18e-12 | 69.7 |
Msa0298630 | MtrunA17_Chr1g0150271 | 39.516 | 124 | 62 | 3 | 282 | 402 | 48 | 161 | 1.70e-23 | 100 |
Msa0298630 | MtrunA17_Chr1g0150281 | 48.889 | 90 | 46 | 0 | 327 | 416 | 125 | 214 | 3.41e-23 | 100 |
Msa0298630 | MtrunA17_Chr5g0447701 | 51.724 | 87 | 41 | 1 | 316 | 402 | 226 | 311 | 3.66e-23 | 102 |
Msa0298630 | MtrunA17_Chr3g0136961 | 52.632 | 76 | 36 | 0 | 325 | 400 | 121 | 196 | 4.34e-23 | 99.8 |
Msa0298630 | MtrunA17_Chr7g0218081 | 36.932 | 176 | 89 | 6 | 247 | 404 | 300 | 471 | 4.35e-23 | 103 |
Msa0298630 | MtrunA17_Chr7g0218081 | 52.459 | 61 | 27 | 2 | 342 | 402 | 228 | 286 | 1.84e-12 | 70.1 |
Msa0298630 | MtrunA17_Chr4g0004911 | 53.165 | 79 | 36 | 1 | 324 | 402 | 318 | 395 | 1.11e-22 | 101 |
Msa0298630 | MtrunA17_Chr4g0004911 | 40.000 | 75 | 42 | 2 | 328 | 402 | 172 | 243 | 1.08e-11 | 67.4 |
Msa0298630 | MtrunA17_Chr7g0243891 | 53.571 | 84 | 38 | 1 | 321 | 404 | 353 | 435 | 1.38e-22 | 101 |
Msa0298630 | MtrunA17_Chr5g0432161 | 52.381 | 84 | 39 | 1 | 321 | 404 | 400 | 482 | 1.49e-22 | 102 |
Msa0298630 | MtrunA17_Chr5g0432161 | 35.714 | 112 | 60 | 4 | 291 | 402 | 203 | 302 | 4.74e-11 | 65.5 |
Msa0298630 | MtrunA17_Chr4g0068541 | 51.948 | 77 | 36 | 1 | 326 | 402 | 192 | 267 | 2.04e-22 | 100 |
Msa0298630 | MtrunA17_Chr7g0270191 | 46.739 | 92 | 42 | 2 | 326 | 417 | 129 | 213 | 6.82e-22 | 96.3 |
Msa0298630 | MtrunA17_Chr5g0418191 | 50.617 | 81 | 39 | 1 | 324 | 404 | 302 | 381 | 7.64e-22 | 98.6 |
Msa0298630 | MtrunA17_Chr5g0418191 | 49.180 | 61 | 29 | 2 | 342 | 402 | 151 | 209 | 1.18e-11 | 67.0 |
Msa0298630 | MtrunA17_Chr5g0418781 | 47.126 | 87 | 45 | 1 | 313 | 399 | 95 | 180 | 1.90e-21 | 94.7 |
Msa0298630 | MtrunA17_Chr7g0249311 | 51.250 | 80 | 38 | 1 | 325 | 404 | 375 | 453 | 3.34e-21 | 98.2 |
Msa0298630 | MtrunA17_Chr7g0249311 | 47.692 | 65 | 32 | 2 | 338 | 402 | 175 | 237 | 7.59e-11 | 65.1 |
Msa0298630 | MtrunA17_Chr2g0294231 | 49.351 | 77 | 38 | 1 | 326 | 402 | 187 | 262 | 3.74e-21 | 95.9 |
Msa0298630 | MtrunA17_Chr4g0042831 | 49.383 | 81 | 40 | 1 | 324 | 404 | 260 | 339 | 4.16e-21 | 95.9 |
Msa0298630 | MtrunA17_Chr4g0042831 | 40.741 | 81 | 45 | 2 | 342 | 422 | 145 | 222 | 3.09e-11 | 65.5 |
Msa0298630 | MtrunA17_Chr7g0249301 | 50.617 | 81 | 39 | 1 | 324 | 404 | 274 | 353 | 4.76e-21 | 95.5 |
Msa0298630 | MtrunA17_Chr7g0249301 | 47.692 | 65 | 32 | 2 | 338 | 402 | 58 | 120 | 4.17e-11 | 65.1 |
Msa0298630 | MtrunA17_Chr1g0150801 | 50.685 | 73 | 35 | 1 | 327 | 399 | 87 | 158 | 8.04e-21 | 89.7 |
Msa0298630 | MtrunA17_Chr7g0224801 | 50.704 | 71 | 34 | 1 | 331 | 401 | 82 | 151 | 2.13e-20 | 89.0 |
Msa0298630 | MtrunA17_Chr1g0194481 | 40.000 | 115 | 65 | 2 | 326 | 437 | 142 | 255 | 3.24e-20 | 92.0 |
Msa0298630 | MtrunA17_Chr2g0333851 | 30.085 | 236 | 87 | 9 | 320 | 545 | 142 | 309 | 3.27e-20 | 92.0 |
Msa0298630 | MtrunA17_Chr4g0051881 | 51.351 | 74 | 35 | 1 | 329 | 402 | 165 | 237 | 6.11e-20 | 91.7 |
Msa0298630 | MtrunA17_Chr1g0147881 | 47.561 | 82 | 43 | 0 | 326 | 407 | 246 | 327 | 1.03e-19 | 90.9 |
Msa0298630 | MtrunA17_Chr3g0129361 | 46.067 | 89 | 46 | 2 | 325 | 413 | 127 | 213 | 1.33e-19 | 87.8 |
Msa0298630 | MtrunA17_Chr8g0383351 | 45.556 | 90 | 46 | 3 | 325 | 413 | 142 | 229 | 7.44e-19 | 86.3 |
Msa0298630 | MtrunA17_Chr7g0263531 | 43.529 | 85 | 47 | 1 | 318 | 402 | 337 | 420 | 1.30e-18 | 88.6 |
Msa0298630 | MtrunA17_Chr7g0263531 | 50.000 | 60 | 28 | 2 | 343 | 402 | 190 | 247 | 1.65e-11 | 66.6 |
Msa0298630 | MtrunA17_Chr8g0379461 | 54.930 | 71 | 31 | 1 | 333 | 402 | 66 | 136 | 1.48e-18 | 85.5 |
Msa0298630 | MtrunA17_Chr4g0074001 | 50.649 | 77 | 37 | 1 | 326 | 402 | 343 | 418 | 1.84e-18 | 89.0 |
Msa0298630 | MtrunA17_Chr5g0443131 | 48.649 | 74 | 37 | 1 | 329 | 402 | 144 | 216 | 2.20e-18 | 86.3 |
Msa0298630 | MtrunA17_Chr8g0386241 | 40.659 | 91 | 53 | 1 | 315 | 405 | 76 | 165 | 2.24e-18 | 83.2 |
Msa0298630 | MtrunA17_Chr8g0335811 | 44.444 | 81 | 44 | 1 | 320 | 400 | 132 | 211 | 4.22e-18 | 83.6 |
Msa0298630 | MtrunA17_Chr1g0184691 | 47.436 | 78 | 41 | 0 | 326 | 403 | 277 | 354 | 4.92e-18 | 86.3 |
Msa0298630 | MtrunA17_Chr8g0383251 | 44.595 | 74 | 40 | 1 | 329 | 402 | 95 | 167 | 5.03e-18 | 82.4 |
Msa0298630 | MtrunA17_Chr4g0053281 | 46.835 | 79 | 42 | 0 | 326 | 404 | 250 | 328 | 6.62e-18 | 85.5 |
Msa0298630 | MtrunA17_Chr5g0401821 | 47.368 | 76 | 40 | 0 | 326 | 401 | 183 | 258 | 1.13e-17 | 83.6 |
Msa0298630 | MtrunA17_Chr7g0270051 | 38.384 | 99 | 55 | 1 | 312 | 404 | 17 | 115 | 1.37e-17 | 83.2 |
Msa0298630 | MtrunA17_Chr2g0284321 | 54.839 | 62 | 28 | 0 | 342 | 403 | 35 | 96 | 1.57e-17 | 81.6 |
Msa0298630 | MtrunA17_Chr2g0319961 | 51.429 | 70 | 34 | 0 | 333 | 402 | 71 | 140 | 1.82e-17 | 82.8 |
Msa0298630 | MtrunA17_Chr4g0071521 | 48.000 | 75 | 39 | 0 | 326 | 400 | 229 | 303 | 2.15e-17 | 83.6 |
Msa0298630 | MtrunA17_Chr3g0129321 | 45.946 | 74 | 39 | 1 | 329 | 402 | 105 | 177 | 8.35e-17 | 79.3 |
Msa0298630 | MtrunA17_Chr7g0228941 | 47.887 | 71 | 37 | 0 | 329 | 399 | 39 | 109 | 1.05e-16 | 76.6 |
Msa0298630 | MtrunA17_Chr2g0289181 | 44.156 | 77 | 43 | 0 | 337 | 413 | 9 | 85 | 1.38e-16 | 79.3 |
Msa0298630 | MtrunA17_Chr1g0188941 | 44.156 | 77 | 42 | 1 | 326 | 402 | 35 | 110 | 1.48e-16 | 75.9 |
Msa0298630 | MtrunA17_Chr7g0248721 | 45.000 | 80 | 42 | 2 | 320 | 399 | 119 | 196 | 2.82e-16 | 78.2 |
Msa0298630 | MtrunA17_Chr3g0139021 | 45.946 | 74 | 40 | 0 | 326 | 399 | 298 | 371 | 4.19e-16 | 80.9 |
Msa0298630 | MtrunA17_Chr6g0485431 | 36.774 | 155 | 79 | 6 | 266 | 402 | 61 | 214 | 3.44e-15 | 77.4 |
Msa0298630 | MtrunA17_Chr7g0238921 | 38.938 | 113 | 64 | 4 | 294 | 403 | 74 | 184 | 3.70e-15 | 77.0 |
Msa0298630 | MtrunA17_Chr2g0293481 | 45.833 | 72 | 39 | 0 | 343 | 414 | 268 | 339 | 5.14e-15 | 77.8 |
Msa0298630 | MtrunA17_Chr8g0348311 | 50.000 | 64 | 32 | 0 | 339 | 402 | 152 | 215 | 6.23e-15 | 76.6 |
Msa0298630 | MtrunA17_Chr7g0248691 | 42.683 | 82 | 35 | 1 | 333 | 402 | 133 | 214 | 1.87e-14 | 74.7 |
Msa0298630 | MtrunA17_Chr1g0202461 | 40.659 | 91 | 52 | 1 | 339 | 429 | 258 | 346 | 4.85e-14 | 74.3 |
Msa0298630 | MtrunA17_Chr1g0189391 | 42.466 | 73 | 40 | 2 | 329 | 400 | 84 | 155 | 1.20e-13 | 72.4 |
Msa0298630 | MtrunA17_Chr3g0126391 | 48.684 | 76 | 32 | 2 | 329 | 397 | 115 | 190 | 1.62e-13 | 72.0 |
Msa0298630 | MtrunA17_Chr8g0387501 | 45.161 | 62 | 34 | 0 | 341 | 402 | 128 | 189 | 1.13e-12 | 68.6 |
Msa0298630 | MtrunA17_Chr7g0244971 | 34.579 | 107 | 67 | 2 | 318 | 421 | 98 | 204 | 1.84e-12 | 68.6 |
Msa0298630 | MtrunA17_Chr7g0244981 | 36.449 | 107 | 65 | 2 | 318 | 421 | 97 | 203 | 3.88e-12 | 67.4 |
Msa0298630 | MtrunA17_Chr8g0347251 | 36.036 | 111 | 56 | 3 | 302 | 397 | 83 | 193 | 4.17e-12 | 67.8 |
Msa0298630 | MtrunA17_Chr4g0024401 | 41.964 | 112 | 43 | 5 | 58 | 165 | 28 | 121 | 1.57e-11 | 62.0 |
Msa0298630 | MtrunA17_Chr2g0315361 | 40.541 | 74 | 42 | 1 | 326 | 397 | 132 | 205 | 3.44e-11 | 64.7 |
Msa0298630 | MtrunA17_Chr5g0447711 | 36.782 | 87 | 54 | 1 | 316 | 402 | 204 | 289 | 3.72e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0298630 | AT1G62300.1 | 49.455 | 459 | 184 | 10 | 127 | 564 | 121 | 552 | 5.14e-121 | 369 |
Msa0298630 | AT4G04450.1 | 44.466 | 506 | 237 | 15 | 68 | 548 | 17 | 503 | 1.75e-108 | 336 |
Msa0298630 | AT4G04450.2 | 47.981 | 421 | 191 | 11 | 144 | 548 | 1 | 409 | 1.47e-100 | 312 |
Msa0298630 | AT4G22070.4 | 45.279 | 519 | 219 | 14 | 69 | 548 | 22 | 514 | 3.90e-100 | 315 |
Msa0298630 | AT4G22070.3 | 45.279 | 519 | 219 | 14 | 69 | 548 | 22 | 514 | 3.90e-100 | 315 |
Msa0298630 | AT4G22070.2 | 45.279 | 519 | 219 | 14 | 69 | 548 | 22 | 514 | 3.90e-100 | 315 |
Msa0298630 | AT4G22070.1 | 45.279 | 519 | 219 | 14 | 69 | 548 | 22 | 514 | 3.90e-100 | 315 |
Msa0298630 | AT4G01720.1 | 40.385 | 416 | 169 | 11 | 150 | 545 | 87 | 443 | 5.46e-66 | 224 |
Msa0298630 | AT5G15130.1 | 32.809 | 445 | 230 | 16 | 161 | 550 | 35 | 465 | 3.30e-50 | 182 |
Msa0298630 | AT5G15130.2 | 32.494 | 437 | 226 | 16 | 169 | 550 | 1 | 423 | 1.98e-48 | 176 |
Msa0298630 | AT1G68150.1 | 38.849 | 278 | 113 | 9 | 165 | 435 | 97 | 324 | 1.53e-45 | 165 |
Msa0298630 | AT1G18860.1 | 37.748 | 302 | 122 | 6 | 325 | 561 | 222 | 522 | 1.14e-41 | 158 |
Msa0298630 | AT1G69810.1 | 33.739 | 329 | 187 | 9 | 161 | 477 | 25 | 334 | 2.31e-38 | 146 |
Msa0298630 | AT1G69810.2 | 45.604 | 182 | 92 | 4 | 298 | 477 | 100 | 276 | 1.59e-36 | 139 |
Msa0298630 | AT2G38470.1 | 44.628 | 121 | 65 | 2 | 324 | 444 | 344 | 462 | 1.89e-25 | 110 |
Msa0298630 | AT2G38470.1 | 45.205 | 73 | 37 | 3 | 330 | 402 | 173 | 242 | 8.39e-11 | 65.1 |
Msa0298630 | AT1G80840.1 | 30.932 | 236 | 92 | 7 | 319 | 545 | 118 | 291 | 4.33e-24 | 103 |
Msa0298630 | AT4G26640.5 | 55.128 | 78 | 34 | 1 | 325 | 402 | 188 | 264 | 5.76e-24 | 104 |
Msa0298630 | AT4G26640.6 | 55.128 | 78 | 34 | 1 | 325 | 402 | 188 | 264 | 5.76e-24 | 104 |
Msa0298630 | AT4G26640.4 | 55.128 | 78 | 34 | 1 | 325 | 402 | 188 | 264 | 5.76e-24 | 104 |
Msa0298630 | AT4G26640.3 | 55.128 | 78 | 34 | 1 | 325 | 402 | 188 | 264 | 5.76e-24 | 104 |
Msa0298630 | AT4G26640.7 | 55.128 | 78 | 34 | 1 | 325 | 402 | 324 | 400 | 1.22e-23 | 105 |
Msa0298630 | AT4G26640.1 | 55.128 | 78 | 34 | 1 | 325 | 402 | 292 | 368 | 1.43e-23 | 104 |
Msa0298630 | AT4G26640.2 | 55.128 | 78 | 34 | 1 | 325 | 402 | 364 | 440 | 1.99e-23 | 104 |
Msa0298630 | AT5G07100.2 | 41.880 | 117 | 61 | 3 | 290 | 402 | 87 | 200 | 1.01e-22 | 97.4 |
Msa0298630 | AT5G07100.4 | 41.880 | 117 | 61 | 3 | 290 | 402 | 87 | 200 | 1.01e-22 | 97.4 |
Msa0298630 | AT5G07100.5 | 41.880 | 117 | 61 | 3 | 290 | 402 | 87 | 200 | 1.01e-22 | 97.4 |
Msa0298630 | AT5G07100.3 | 41.880 | 117 | 61 | 3 | 290 | 402 | 87 | 200 | 1.01e-22 | 97.4 |
Msa0298630 | AT2G04880.2 | 47.674 | 86 | 44 | 1 | 321 | 406 | 262 | 346 | 1.54e-22 | 101 |
Msa0298630 | AT2G04880.2 | 33.103 | 145 | 84 | 5 | 330 | 466 | 92 | 231 | 8.10e-11 | 65.1 |
Msa0298630 | AT1G13960.1 | 53.165 | 79 | 36 | 1 | 324 | 402 | 391 | 468 | 1.96e-22 | 101 |
Msa0298630 | AT1G13960.1 | 49.180 | 61 | 29 | 2 | 342 | 402 | 229 | 287 | 6.60e-12 | 68.6 |
Msa0298630 | AT5G07100.1 | 40.625 | 128 | 66 | 4 | 279 | 402 | 172 | 293 | 2.04e-22 | 98.6 |
Msa0298630 | AT1G13960.2 | 53.165 | 79 | 36 | 1 | 324 | 402 | 238 | 315 | 2.06e-22 | 99.8 |
Msa0298630 | AT1G13960.2 | 49.180 | 61 | 29 | 2 | 342 | 402 | 76 | 134 | 1.19e-11 | 67.0 |
Msa0298630 | AT2G04880.1 | 47.674 | 86 | 44 | 1 | 321 | 406 | 286 | 370 | 2.16e-22 | 101 |
Msa0298630 | AT4G31800.2 | 58.462 | 65 | 27 | 0 | 341 | 405 | 110 | 174 | 5.69e-22 | 95.9 |
Msa0298630 | AT5G56270.1 | 53.750 | 80 | 36 | 1 | 325 | 404 | 470 | 548 | 6.07e-22 | 100 |
Msa0298630 | AT4G31800.1 | 58.462 | 65 | 27 | 0 | 341 | 405 | 175 | 239 | 6.43e-22 | 97.4 |
Msa0298630 | AT1G29860.1 | 41.964 | 112 | 58 | 2 | 326 | 431 | 120 | 230 | 6.67e-22 | 96.7 |
Msa0298630 | AT5G49520.1 | 49.351 | 77 | 38 | 1 | 326 | 402 | 205 | 280 | 7.92e-22 | 98.6 |
Msa0298630 | AT5G26170.1 | 50.685 | 73 | 35 | 1 | 328 | 400 | 99 | 170 | 8.00e-22 | 93.2 |
Msa0298630 | AT2G25000.3 | 42.708 | 96 | 55 | 0 | 311 | 406 | 94 | 189 | 1.08e-21 | 95.1 |
Msa0298630 | AT2G25000.2 | 42.708 | 96 | 55 | 0 | 311 | 406 | 72 | 167 | 1.15e-21 | 94.4 |
Msa0298630 | AT2G25000.4 | 42.708 | 96 | 55 | 0 | 311 | 406 | 72 | 167 | 1.15e-21 | 94.4 |
Msa0298630 | AT2G25000.1 | 42.708 | 96 | 55 | 0 | 311 | 406 | 115 | 210 | 1.92e-21 | 95.1 |
Msa0298630 | AT2G03340.1 | 48.276 | 87 | 44 | 1 | 318 | 404 | 391 | 476 | 2.69e-21 | 98.2 |
Msa0298630 | AT1G69310.4 | 42.157 | 102 | 55 | 2 | 301 | 399 | 103 | 203 | 6.99e-21 | 93.6 |
Msa0298630 | AT1G69310.2 | 42.157 | 102 | 55 | 2 | 301 | 399 | 103 | 203 | 6.99e-21 | 93.6 |
Msa0298630 | AT1G69310.1 | 42.157 | 102 | 55 | 2 | 301 | 399 | 103 | 203 | 6.99e-21 | 93.6 |
Msa0298630 | AT4G18170.1 | 51.948 | 77 | 36 | 1 | 326 | 402 | 156 | 231 | 8.79e-21 | 94.0 |
Msa0298630 | AT3G01080.2 | 46.512 | 86 | 45 | 1 | 317 | 402 | 319 | 403 | 3.05e-20 | 94.4 |
Msa0298630 | AT3G01080.1 | 46.512 | 86 | 45 | 1 | 317 | 402 | 281 | 365 | 3.09e-20 | 94.0 |
Msa0298630 | AT2G47260.1 | 50.649 | 77 | 37 | 1 | 326 | 402 | 158 | 233 | 3.54e-20 | 92.4 |
Msa0298630 | AT2G30250.1 | 50.000 | 80 | 39 | 1 | 325 | 404 | 311 | 389 | 4.32e-20 | 93.2 |
Msa0298630 | AT4G26440.1 | 50.633 | 79 | 38 | 1 | 326 | 404 | 356 | 433 | 8.17e-20 | 93.6 |
Msa0298630 | AT4G26440.1 | 50.000 | 62 | 29 | 2 | 342 | 403 | 178 | 237 | 3.89e-12 | 69.7 |
Msa0298630 | AT3G01970.1 | 51.351 | 74 | 35 | 1 | 328 | 401 | 51 | 123 | 1.02e-19 | 86.7 |
Msa0298630 | AT1G64000.1 | 41.346 | 104 | 56 | 2 | 316 | 419 | 88 | 186 | 2.22e-19 | 87.0 |
Msa0298630 | AT5G46350.1 | 50.000 | 74 | 36 | 1 | 329 | 402 | 170 | 242 | 2.25e-19 | 90.1 |
Msa0298630 | AT5G41570.1 | 50.000 | 82 | 39 | 2 | 319 | 399 | 74 | 154 | 2.92e-19 | 86.3 |
Msa0298630 | AT4G39410.1 | 44.444 | 81 | 44 | 1 | 320 | 400 | 201 | 280 | 3.13e-19 | 89.4 |
Msa0298630 | AT1G55600.1 | 43.820 | 89 | 49 | 1 | 316 | 404 | 281 | 368 | 8.43e-19 | 90.1 |
Msa0298630 | AT5G13080.1 | 50.685 | 73 | 35 | 1 | 329 | 401 | 54 | 125 | 9.84e-19 | 83.6 |
Msa0298630 | AT4G30935.1 | 50.649 | 77 | 37 | 1 | 326 | 402 | 315 | 390 | 2.02e-18 | 89.0 |
Msa0298630 | AT2G46130.1 | 48.718 | 78 | 39 | 1 | 322 | 399 | 10 | 86 | 3.16e-18 | 80.9 |
Msa0298630 | AT4G24240.1 | 50.000 | 76 | 38 | 0 | 326 | 401 | 265 | 340 | 3.73e-18 | 86.7 |
Msa0298630 | AT2G23320.1 | 57.627 | 59 | 25 | 0 | 343 | 401 | 241 | 299 | 4.67e-18 | 85.9 |
Msa0298630 | AT3G62340.1 | 50.000 | 78 | 38 | 1 | 329 | 406 | 105 | 181 | 6.92e-18 | 84.7 |
Msa0298630 | AT2G30590.1 | 48.352 | 91 | 40 | 3 | 323 | 406 | 288 | 378 | 7.82e-18 | 86.3 |
Msa0298630 | AT2G44745.1 | 46.667 | 75 | 39 | 1 | 325 | 399 | 128 | 201 | 8.28e-18 | 83.2 |
Msa0298630 | AT5G28650.1 | 49.383 | 81 | 35 | 2 | 326 | 400 | 240 | 320 | 8.78e-18 | 85.5 |
Msa0298630 | AT5G64810.1 | 47.887 | 71 | 36 | 1 | 329 | 399 | 97 | 166 | 9.68e-18 | 82.4 |
Msa0298630 | AT2G24570.1 | 50.000 | 74 | 37 | 0 | 326 | 399 | 227 | 300 | 1.03e-17 | 85.1 |
Msa0298630 | AT4G31550.1 | 48.649 | 74 | 38 | 0 | 326 | 399 | 230 | 303 | 2.16e-17 | 84.0 |
Msa0298630 | AT4G31550.2 | 48.649 | 74 | 38 | 0 | 326 | 399 | 229 | 302 | 2.17e-17 | 84.0 |
Msa0298630 | AT1G29280.1 | 47.143 | 70 | 37 | 0 | 333 | 402 | 65 | 134 | 3.85e-17 | 82.0 |
Msa0298630 | AT3G04670.1 | 48.148 | 81 | 36 | 2 | 326 | 400 | 240 | 320 | 4.68e-17 | 83.2 |
Msa0298630 | AT3G58710.1 | 43.820 | 89 | 49 | 1 | 315 | 402 | 43 | 131 | 3.79e-16 | 79.3 |
Msa0298630 | AT3G58710.2 | 43.820 | 89 | 49 | 1 | 315 | 402 | 42 | 130 | 4.06e-16 | 79.3 |
Msa0298630 | AT2G37260.2 | 49.333 | 75 | 34 | 2 | 337 | 408 | 262 | 335 | 5.16e-16 | 80.1 |
Msa0298630 | AT2G37260.2 | 48.438 | 64 | 31 | 2 | 343 | 406 | 84 | 145 | 7.61e-13 | 70.5 |
Msa0298630 | AT2G37260.3 | 49.333 | 75 | 34 | 2 | 337 | 408 | 264 | 337 | 5.17e-16 | 80.1 |
Msa0298630 | AT2G37260.3 | 48.438 | 64 | 31 | 2 | 343 | 406 | 86 | 147 | 7.18e-13 | 70.9 |
Msa0298630 | AT1G69310.3 | 39.216 | 102 | 54 | 3 | 301 | 399 | 103 | 199 | 5.37e-16 | 79.3 |
Msa0298630 | AT2G37260.1 | 49.333 | 75 | 34 | 2 | 337 | 408 | 344 | 417 | 9.57e-16 | 80.1 |
Msa0298630 | AT2G37260.1 | 48.438 | 64 | 31 | 2 | 343 | 406 | 166 | 227 | 1.05e-12 | 70.9 |
Msa0298630 | AT4G01250.1 | 37.143 | 105 | 53 | 1 | 342 | 433 | 128 | 232 | 1.25e-15 | 78.6 |
Msa0298630 | AT5G52830.1 | 50.746 | 67 | 33 | 0 | 336 | 402 | 159 | 225 | 1.52e-15 | 79.0 |
Msa0298630 | AT4G23550.1 | 48.485 | 66 | 34 | 0 | 337 | 402 | 135 | 200 | 2.25e-15 | 77.8 |
Msa0298630 | AT2G34830.1 | 44.737 | 76 | 41 | 1 | 328 | 402 | 200 | 275 | 4.29e-15 | 78.2 |
Msa0298630 | AT1G30650.1 | 44.737 | 76 | 41 | 1 | 328 | 402 | 202 | 277 | 4.68e-15 | 78.2 |
Msa0298630 | AT2G34830.2 | 44.737 | 76 | 41 | 1 | 328 | 402 | 209 | 284 | 5.57e-15 | 77.8 |
Msa0298630 | AT2G46130.2 | 42.391 | 92 | 44 | 4 | 322 | 413 | 10 | 92 | 1.15e-14 | 70.9 |
Msa0298630 | AT5G43290.1 | 43.421 | 76 | 41 | 2 | 329 | 403 | 100 | 174 | 2.71e-14 | 73.9 |
Msa0298630 | AT4G31800.3 | 61.538 | 39 | 15 | 0 | 341 | 379 | 175 | 213 | 2.72e-12 | 67.4 |
Msa0298630 | AT2G46400.1 | 41.772 | 79 | 44 | 1 | 321 | 397 | 83 | 161 | 8.40e-12 | 67.0 |
Msa0298630 | AT2G21900.1 | 40.909 | 66 | 38 | 1 | 337 | 402 | 104 | 168 | 1.35e-11 | 64.7 |
Msa0298630 | AT5G45050.2 | 47.541 | 61 | 32 | 0 | 342 | 402 | 1152 | 1212 | 2.03e-11 | 67.8 |
Msa0298630 | AT5G45050.1 | 47.541 | 61 | 32 | 0 | 342 | 402 | 1180 | 1240 | 2.04e-11 | 67.8 |
Msa0298630 | AT5G45050.4 | 47.541 | 61 | 32 | 0 | 342 | 402 | 1041 | 1101 | 2.09e-11 | 67.8 |
Find 124 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGTTCCAAGACAATTTA+TGG | 0.128951 | 2_3:+52769317 | Msa0298630:CDS |
ATTGCTCTTGTGAGGTAATT+TGG | 0.146915 | 2_3:-52771757 | None:intergenic |
TTTGACTGATCTTGACTTCT+TGG | 0.153654 | 2_3:-52769381 | None:intergenic |
GGTTATTAGGGAACTGGTTT+TGG | 0.212904 | 2_3:-52771864 | None:intergenic |
CTGCTATTACTTCAATTATT+GGG | 0.212910 | 2_3:+52772085 | Msa0298630:CDS |
GCTGCTATTACTTCAATTAT+TGG | 0.268652 | 2_3:+52772084 | Msa0298630:CDS |
TGGTATAAGAAGCTTGAATT+TGG | 0.269953 | 2_3:-52768079 | None:intergenic |
TTGAGAATTCTATTTGCTTA+TGG | 0.285405 | 2_3:-52768099 | None:intergenic |
AAATGGGAATGGTGGAGTTT+TGG | 0.297182 | 2_3:+52769299 | Msa0298630:CDS |
TTGCTCTTGTGAGGTAATTT+GGG | 0.310844 | 2_3:-52771756 | None:intergenic |
CTAGTACCGTTATTATTGTT+TGG | 0.316751 | 2_3:-52772117 | None:intergenic |
CTTGACGAGGAGAAACAAAA+TGG | 0.319265 | 2_3:+52769282 | Msa0298630:CDS |
TTTGGTTTGGTGACTGAGTT+AGG | 0.325584 | 2_3:-52771846 | None:intergenic |
AGGGAAATTGGAACTGGTTA+GGG | 0.327267 | 2_3:-52771888 | None:intergenic |
ACATGCTTGATGAGGGTAAT+AGG | 0.328005 | 2_3:+52769163 | Msa0298630:CDS |
ATTTCATGGTTGACTTGAAA+TGG | 0.347073 | 2_3:-52768211 | None:intergenic |
GTTGCTATGCTTGAAGAATA+AGG | 0.353526 | 2_3:-52771784 | None:intergenic |
AATAACGGTACTAGCAATAA+TGG | 0.353919 | 2_3:+52772126 | Msa0298630:CDS |
GGGAAATTGGAACTGGTTAG+GGG | 0.369219 | 2_3:-52771887 | None:intergenic |
AAACTTATATAGTCACAAAA+TGG | 0.380131 | 2_3:+52768162 | Msa0298630:CDS |
AGGGTTGATGAGATATTTCA+TGG | 0.388556 | 2_3:-52768225 | None:intergenic |
CCAAGACAATTTATGGAGCT+TGG | 0.403211 | 2_3:+52769324 | Msa0298630:CDS |
AAGGGAAATTGGAACTGGTT+AGG | 0.406882 | 2_3:-52771889 | None:intergenic |
TTTATGGCCAGTGGAGGGCT+TGG | 0.407903 | 2_3:+52768037 | None:intergenic |
GGATGTCAATGGAGAAAGTA+TGG | 0.409848 | 2_3:+52769740 | Msa0298630:CDS |
TTACACCGATCCTTCTCTCT+TGG | 0.412872 | 2_3:+52768387 | Msa0298630:CDS |
TCCTAACTTCACTGCAGCTT+TGG | 0.414246 | 2_3:+52772059 | Msa0298630:CDS |
TGCTATGTCTTCCTCCATCA+TGG | 0.419633 | 2_3:-52768946 | None:intergenic |
TATCGATGCACCATGGCCTT+AGG | 0.425405 | 2_3:+52769803 | Msa0298630:CDS |
GAAATTGGAACTGGTTAGGG+GGG | 0.429542 | 2_3:-52771885 | None:intergenic |
GAGGGAAGGGAAATTGGAAC+TGG | 0.429543 | 2_3:-52771894 | None:intergenic |
GCTTGTTCAACATTTGTTTG+AGG | 0.439934 | 2_3:-52769561 | None:intergenic |
AGTCCATCAGCACTTGTCAT+TGG | 0.447523 | 2_3:-52771727 | None:intergenic |
GCCAAAGCTGCAGTGAAGTT+AGG | 0.449086 | 2_3:-52772060 | None:intergenic |
TGTACCATTTCCATGGCTGC+TGG | 0.449195 | 2_3:-52771667 | None:intergenic |
TCCAATGTAACAGTTGGAAA+TGG | 0.451153 | 2_3:-52771823 | None:intergenic |
AGACACAAGTTCTTCAACCT+TGG | 0.451540 | 2_3:-52769433 | None:intergenic |
CGATAATAAGCTCGAGGACA+CGG | 0.453138 | 2_3:-52769785 | None:intergenic |
GCCTCCAGCAGCCATGGAAA+TGG | 0.453401 | 2_3:+52771663 | Msa0298630:CDS |
ACAATAGCTAACAACACTAA+TGG | 0.455086 | 2_3:+52772156 | Msa0298630:CDS |
TCCATTTCCAACTGTTACAT+TGG | 0.455513 | 2_3:+52771822 | Msa0298630:CDS |
ACAATTTATGGAGCTTGGAT+TGG | 0.459747 | 2_3:+52769329 | Msa0298630:CDS |
TAGTTACTCTACTGAGGAGT+TGG | 0.459750 | 2_3:-52772229 | None:intergenic |
TGAGGGAGGTGTAGAGGTAG+AGG | 0.463067 | 2_3:-52768326 | None:intergenic |
TGCTTTGCCTCCAGCAGCCA+TGG | 0.466775 | 2_3:+52771657 | Msa0298630:CDS |
TGAATTTGGATCTGAATCAA+TGG | 0.468905 | 2_3:-52768065 | None:intergenic |
GGAAATTGGAACTGGTTAGG+GGG | 0.470023 | 2_3:-52771886 | None:intergenic |
CACCTTCATTCTCTCAAGCT+CGG | 0.471926 | 2_3:-52769121 | None:intergenic |
CCAAGCTCCATAAATTGTCT+TGG | 0.475471 | 2_3:-52769324 | None:intergenic |
GAAGAGCAAAAGCAAGTGAT+TGG | 0.479656 | 2_3:+52769252 | Msa0298630:CDS |
AACCCTTGCTTTCCTCATAG+TGG | 0.482051 | 2_3:-52769589 | None:intergenic |
GCAGATGCATTGGATGAGTA+TGG | 0.482506 | 2_3:+52769200 | Msa0298630:CDS |
TGAAAAGAAGGAATCCGATC+GGG | 0.482638 | 2_3:+52769461 | Msa0298630:CDS |
ATTTAGTGAGGGAGGTGTAG+AGG | 0.493533 | 2_3:-52768332 | None:intergenic |
TGCTATTACTTCAATTATTG+GGG | 0.494301 | 2_3:+52772086 | Msa0298630:CDS |
AGGTCTCATTTCATGATCAA+AGG | 0.497698 | 2_3:-52768245 | None:intergenic |
AAGTCTAGTTCATTGATGAT+AGG | 0.502804 | 2_3:-52768265 | None:intergenic |
TGTGTCTGATCATGAAAAGA+AGG | 0.508518 | 2_3:+52769449 | Msa0298630:CDS |
GGAGAGTCCAAGCCCTCCAC+TGG | 0.521274 | 2_3:-52768044 | None:intergenic |
GGTCTCATTTCATGATCAAA+GGG | 0.522587 | 2_3:-52768244 | None:intergenic |
GCAGCTAAAACTCGATCTGC+AGG | 0.523186 | 2_3:-52769504 | None:intergenic |
AGTTACTCTACTGAGGAGTT+GGG | 0.523710 | 2_3:-52772228 | None:intergenic |
AGGTTGTCCTGTGAGAAAAC+AGG | 0.526028 | 2_3:+52769823 | Msa0298630:CDS |
AGCTCGATCCGAGGCTAACA+TGG | 0.526714 | 2_3:+52769620 | Msa0298630:CDS |
ATACTTATCACAACATATGA+AGG | 0.527047 | 2_3:+52771622 | Msa0298630:CDS |
GATAATAAGCTCGAGGACAC+GGG | 0.530098 | 2_3:-52769784 | None:intergenic |
TTGAAATTTATGGCCAGTGG+AGG | 0.532791 | 2_3:+52768031 | None:intergenic |
GGATTGATCATTGCTTGTGT+TGG | 0.535532 | 2_3:-52768925 | None:intergenic |
ACAACACATTGCAGATGCAT+TGG | 0.536029 | 2_3:+52769190 | Msa0298630:CDS |
CATAATTTGCACAGGTACAA+AGG | 0.536458 | 2_3:+52771581 | Msa0298630:intron |
TGTTGTTTGTACCATTTCCA+TGG | 0.536935 | 2_3:-52771674 | None:intergenic |
GAGAAAGTATGGACAGAAGA+TGG | 0.537071 | 2_3:+52769751 | Msa0298630:CDS |
TTGACGAGGAGAAACAAAAT+GGG | 0.537409 | 2_3:+52769283 | Msa0298630:CDS |
GGACCAATGACAAGTGCTGA+TGG | 0.540715 | 2_3:+52771724 | Msa0298630:CDS |
GCTGCAAGAATGTTACTGTC+AGG | 0.544674 | 2_3:+52771703 | Msa0298630:CDS |
ACTTTGAATTCCAAGAGAGA+AGG | 0.550837 | 2_3:-52768397 | None:intergenic |
AGATCAATGATGGATGTCAA+TGG | 0.557548 | 2_3:+52769729 | Msa0298630:intron |
TCATTGAAATTTATGGCCAG+TGG | 0.559553 | 2_3:+52768028 | None:intergenic |
CTGAGGAACATGCTTGATGA+GGG | 0.560805 | 2_3:+52769156 | Msa0298630:CDS |
GAGTATGGTGCAAGACAAGA+AGG | 0.561536 | 2_3:+52769215 | Msa0298630:CDS |
GAGCAAAAGCAAGTGATTGG+TGG | 0.565607 | 2_3:+52769255 | Msa0298630:CDS |
GTTAGGTCCAATGTAACAGT+TGG | 0.567146 | 2_3:-52771829 | None:intergenic |
ATGAAAAGAAGGAATCCGAT+CGG | 0.570044 | 2_3:+52769460 | Msa0298630:CDS |
AGGCCACTATGAGGAAAGCA+AGG | 0.570684 | 2_3:+52769586 | Msa0298630:CDS |
ACATCAAGTAACAATACCAT+TGG | 0.571515 | 2_3:+52772186 | Msa0298630:CDS |
TAACAATGAGGAAGATTCCA+AGG | 0.572334 | 2_3:+52769416 | Msa0298630:CDS |
TGAAATTTATGGCCAGTGGA+GGG | 0.583495 | 2_3:+52768032 | None:intergenic |
GCACAGCCAAACAATAATAA+CGG | 0.583839 | 2_3:+52772111 | Msa0298630:CDS |
CACAGGACAACCTAAGGCCA+TGG | 0.587201 | 2_3:-52769813 | None:intergenic |
AAGCAATGATCAATCCATGA+TGG | 0.591359 | 2_3:+52768932 | Msa0298630:CDS |
ACCATTTCCATGGCTGCTGG+AGG | 0.594431 | 2_3:-52771664 | None:intergenic |
CTATGCTTGAAGAATAAGGA+AGG | 0.594569 | 2_3:-52771780 | None:intergenic |
GGTGCAAGACAAGAAGGTAG+AGG | 0.597094 | 2_3:+52769221 | Msa0298630:CDS |
GAATTCCAAGAGAGAAGGAT+CGG | 0.597121 | 2_3:-52768392 | None:intergenic |
GAGAAACAAAATGGGAATGG+TGG | 0.597350 | 2_3:+52769291 | Msa0298630:CDS |
GAAGTGTACCATGTTAGCCT+CGG | 0.600264 | 2_3:-52769628 | None:intergenic |
AGGCAGATGCAAGGTTGTGA+TGG | 0.603220 | 2_3:-52768306 | None:intergenic |
AACAAGCTGAGGCCACTATG+AGG | 0.607043 | 2_3:+52769577 | Msa0298630:CDS |
ATGATGATGAAGATTTAGTG+AGG | 0.611103 | 2_3:-52768344 | None:intergenic |
ACTGAGGAACATGCTTGATG+AGG | 0.611969 | 2_3:+52769155 | Msa0298630:CDS |
AGCCGAGCTTGAGAGAATGA+AGG | 0.613065 | 2_3:+52769119 | Msa0298630:CDS |
AACAAATGTTGAACAAGCTG+AGG | 0.613373 | 2_3:+52769566 | Msa0298630:CDS |
AAGGAAGGATTGCTCTTGTG+AGG | 0.621106 | 2_3:-52771765 | None:intergenic |
GAGGAGAAACAAAATGGGAA+TGG | 0.622785 | 2_3:+52769288 | Msa0298630:CDS |
TAGCATTAACTGTGTCAGCA+AGG | 0.623284 | 2_3:-52772026 | None:intergenic |
TAGAGGTAGAGGCAGATGCA+AGG | 0.626052 | 2_3:-52768315 | None:intergenic |
TGATGAAGATTTAGTGAGGG+AGG | 0.630220 | 2_3:-52768340 | None:intergenic |
CGAGCTTGAGAGAATGAAGG+TGG | 0.635577 | 2_3:+52769122 | Msa0298630:CDS |
TGATGATGAAGATTTAGTGA+GGG | 0.636759 | 2_3:-52768343 | None:intergenic |
ATCACTTGCAAATAACAATG+AGG | 0.638605 | 2_3:+52769404 | Msa0298630:CDS |
TATGGACAGAAGATGGCGAA+AGG | 0.642826 | 2_3:+52769758 | Msa0298630:CDS |
CAATGATCAATCCATGATGG+AGG | 0.645307 | 2_3:+52768935 | Msa0298630:CDS |
AGACAAAAGAGCTAAGCTTG+AGG | 0.649723 | 2_3:+52768980 | Msa0298630:CDS |
TTCAGTTAGAGCTCGATCCG+AGG | 0.654330 | 2_3:+52769611 | Msa0298630:CDS |
GGCCACTATGAGGAAAGCAA+GGG | 0.654709 | 2_3:+52769587 | Msa0298630:CDS |
AGCTTATTATCGATGCACCA+TGG | 0.661870 | 2_3:+52769796 | Msa0298630:CDS |
GAAAAGAAGGAATCCGATCG+GGG | 0.662543 | 2_3:+52769462 | Msa0298630:CDS |
ACTGTGTCAGCAAGGTTCTG+TGG | 0.667152 | 2_3:-52772018 | None:intergenic |
GTGCATCGATAATAAGCTCG+AGG | 0.678750 | 2_3:-52769791 | None:intergenic |
GTGGGCTAGTTACTCTACTG+AGG | 0.679123 | 2_3:-52772235 | None:intergenic |
CTGGAGGCAAAGCATGAATG+TGG | 0.696495 | 2_3:-52771648 | None:intergenic |
GATTGGTGGAAAACTTGACG+AGG | 0.698059 | 2_3:+52769269 | Msa0298630:CDS |
AGGTGGAGAATCATCAACTG+AGG | 0.706865 | 2_3:+52769139 | Msa0298630:CDS |
AATGTCTGACCAAATACCTG+AGG | 0.730527 | 2_3:-52771928 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAGTGATATTATATATA+TGG | - | chr2_3:52768623-52768642 | None:intergenic | 10.0% |
!! | TTCAAAAAAAAAAATGAAAT+TGG | - | chr2_3:52770876-52770895 | None:intergenic | 10.0% |
!! | ACTATTAGAAAACATTAAAT+TGG | + | chr2_3:52768636-52768655 | Msa0298630:intron | 15.0% |
!!! | ATTTTCTCATTACTAAATTT+TGG | + | chr2_3:52768720-52768739 | Msa0298630:intron | 15.0% |
!!! | TAATTTCTATAAACTTTTTC+AGG | - | chr2_3:52770280-52770299 | None:intergenic | 15.0% |
!! | AATAAAGACAAAAGATAATT+TGG | + | chr2_3:52770672-52770691 | Msa0298630:intron | 15.0% |
!! | CATCTTAAAAATAAAAATGA+CGG | - | chr2_3:52770849-52770868 | None:intergenic | 15.0% |
!!! | GTCATTTTTATTTTTAAGAT+GGG | + | chr2_3:52770848-52770867 | Msa0298630:intron | 15.0% |
!!! | ACTTTTTTTTGTAAACATTT+TGG | + | chr2_3:52771113-52771132 | Msa0298630:intron | 15.0% |
!!! | TAATTTCAGTAAACTTTTTT+AGG | - | chr2_3:52771222-52771241 | None:intergenic | 15.0% |
!! | AAACTTATATAGTCACAAAA+TGG | + | chr2_3:52768162-52768181 | Msa0298630:CDS | 20.0% |
!! | ATTGCAATATCAATAACATA+TGG | - | chr2_3:52768513-52768532 | None:intergenic | 20.0% |
!! | TATATATATGGAATACCAAA+GGG | - | chr2_3:52768611-52768630 | None:intergenic | 20.0% |
!! | TTATATATATGGAATACCAA+AGG | - | chr2_3:52768612-52768631 | None:intergenic | 20.0% |
!!! | AACAAATTTTCCCATAAAAA+AGG | + | chr2_3:52768670-52768689 | Msa0298630:intron | 20.0% |
!!! | ACAAATTTTCCCATAAAAAA+GGG | + | chr2_3:52768671-52768690 | Msa0298630:intron | 20.0% |
!!! | TTTTTACTTCCCTTTTTTAT+GGG | - | chr2_3:52768683-52768702 | None:intergenic | 20.0% |
!!! | TTTTTTACTTCCCTTTTTTA+TGG | - | chr2_3:52768684-52768703 | None:intergenic | 20.0% |
!!! | TATTTAATTTGTTTGGTGAA+TGG | + | chr2_3:52768747-52768766 | Msa0298630:intron | 20.0% |
!! | TAAATGTTAGCTATAATAGT+TGG | + | chr2_3:52769860-52769879 | Msa0298630:intron | 20.0% |
!! | AAAGACTTATGAAACTATTT+GGG | - | chr2_3:52770337-52770356 | None:intergenic | 20.0% |
!!! | CTGTTTTATATTGACTTATT+TGG | - | chr2_3:52770376-52770395 | None:intergenic | 20.0% |
!!! | GTTACTGTAGTTTAATATTT+TGG | - | chr2_3:52770422-52770441 | None:intergenic | 20.0% |
!!! | TTATATCTTCCATTTTATTC+TGG | - | chr2_3:52770494-52770513 | None:intergenic | 20.0% |
!! | TGTTTATATTGTCATTAAAC+TGG | + | chr2_3:52770538-52770557 | Msa0298630:intron | 20.0% |
!! | AAAAGATAATTTGGACATTA+GGG | + | chr2_3:52770681-52770700 | Msa0298630:intron | 20.0% |
!!! | CGTCATTTTTATTTTTAAGA+TGG | + | chr2_3:52770847-52770866 | Msa0298630:intron | 20.0% |
!!! | TAACTTTTTATTTAGAGCTT+AGG | + | chr2_3:52770901-52770920 | Msa0298630:intron | 20.0% |
!! | TTAGGTTTATACTCATTATT+TGG | + | chr2_3:52770919-52770938 | Msa0298630:intron | 20.0% |
!! | TAGGTTTATACTCATTATTT+GGG | + | chr2_3:52770920-52770939 | Msa0298630:intron | 20.0% |
!!! | TTTTTTTGTAAACATTTTGG+TGG | + | chr2_3:52771116-52771135 | Msa0298630:intron | 20.0% |
!!! | TAATTCGGGTTTTATAAAAA+TGG | - | chr2_3:52771511-52771530 | None:intergenic | 20.0% |
! | TTGAGAATTCTATTTGCTTA+TGG | - | chr2_3:52768102-52768121 | None:intergenic | 25.0% |
!!! | AGATTTGTTTTTGTTGTTTG+TGG | - | chr2_3:52768191-52768210 | None:intergenic | 25.0% |
!!! | TGGTTGCTATTTAATTTGTT+TGG | + | chr2_3:52768740-52768759 | Msa0298630:intron | 25.0% |
! | GCACATATTATATATGACAT+TGG | + | chr2_3:52768845-52768864 | Msa0298630:intron | 25.0% |
! | TTAAATGAATAATCATCGAG+TGG | + | chr2_3:52769057-52769076 | Msa0298630:intron | 25.0% |
!! | GAAGAATGAAATGTTTGTTT+TGG | + | chr2_3:52769669-52769688 | Msa0298630:intron | 25.0% |
! | CAATAATATCCAATCAATCA+TGG | + | chr2_3:52770090-52770109 | Msa0298630:intron | 25.0% |
! | TAAAACTGTTTATCCAAACA+TGG | - | chr2_3:52770150-52770169 | None:intergenic | 25.0% |
! | CAAAGACTTATGAAACTATT+TGG | - | chr2_3:52770338-52770357 | None:intergenic | 25.0% |
!! | GACAATATAAACATGCTTTT+AGG | - | chr2_3:52770531-52770550 | None:intergenic | 25.0% |
! | TTATATTGTCATTAAACTGG+AGG | + | chr2_3:52770541-52770560 | Msa0298630:intron | 25.0% |
! | TCGATATAATCAAACTCTTA+AGG | - | chr2_3:52770624-52770643 | None:intergenic | 25.0% |
! | TTATATCGATGCTTGTTTAA+CGG | + | chr2_3:52770635-52770654 | Msa0298630:intron | 25.0% |
! | CAAAAGATAATTTGGACATT+AGG | + | chr2_3:52770680-52770699 | Msa0298630:intron | 25.0% |
! | AAAGATAATTTGGACATTAG+GGG | + | chr2_3:52770682-52770701 | Msa0298630:intron | 25.0% |
! | TCAAAAAAATTGAGCAATGT+GGG | - | chr2_3:52770735-52770754 | None:intergenic | 25.0% |
! | ATCAAAAAAATTGAGCAATG+TGG | - | chr2_3:52770736-52770755 | None:intergenic | 25.0% |
!!! | GCTCAATTTTTTTGATTGTT+TGG | + | chr2_3:52770740-52770759 | Msa0298630:intron | 25.0% |
! | ACGTTTAAAAAAGGTAGAAA+AGG | - | chr2_3:52771004-52771023 | None:intergenic | 25.0% |
! | TATGCAAACACGTTTAAAAA+AGG | - | chr2_3:52771013-52771032 | None:intergenic | 25.0% |
! | TTTAAACGTGTTTGCATAAA+TGG | + | chr2_3:52771015-52771034 | Msa0298630:intron | 25.0% |
!! | GGATTACTACAATTGTATTT+TGG | - | chr2_3:52771074-52771093 | None:intergenic | 25.0% |
! | AGTTGAAATTCGCTTATTAT+GGG | - | chr2_3:52771096-52771115 | None:intergenic | 25.0% |
! | AAGTTGAAATTCGCTTATTA+TGG | - | chr2_3:52771097-52771116 | None:intergenic | 25.0% |
! | TTTATAAAAATGGTTCACGA+CGG | - | chr2_3:52771501-52771520 | None:intergenic | 25.0% |
!! | ACAGCTTGATAACTTTAATT+CGG | - | chr2_3:52771526-52771545 | None:intergenic | 25.0% |
! | ATACTTATCACAACATATGA+AGG | + | chr2_3:52771622-52771641 | Msa0298630:CDS | 25.0% |
!! | TTGAACCAATCAAAATTTTC+AGG | + | chr2_3:52771952-52771971 | Msa0298630:CDS | 25.0% |
! | CTGCTATTACTTCAATTATT+GGG | + | chr2_3:52772085-52772104 | Msa0298630:CDS | 25.0% |
! | TGCTATTACTTCAATTATTG+GGG | + | chr2_3:52772086-52772105 | Msa0298630:CDS | 25.0% |
TGAATTTGGATCTGAATCAA+TGG | - | chr2_3:52768068-52768087 | None:intergenic | 30.0% | |
TGGTATAAGAAGCTTGAATT+TGG | - | chr2_3:52768082-52768101 | None:intergenic | 30.0% | |
!! | ATTTCATGGTTGACTTGAAA+TGG | - | chr2_3:52768214-52768233 | None:intergenic | 30.0% |
! | AAGTCTAGTTCATTGATGAT+AGG | - | chr2_3:52768268-52768287 | None:intergenic | 30.0% |
! | TGATGATGAAGATTTAGTGA+GGG | - | chr2_3:52768346-52768365 | None:intergenic | 30.0% |
! | ATGATGATGAAGATTTAGTG+AGG | - | chr2_3:52768347-52768366 | None:intergenic | 30.0% |
TCACTATTGTATAAACCATG+TGG | + | chr2_3:52768472-52768491 | Msa0298630:intron | 30.0% | |
! | TTTGGTTCCAAGACAATTTA+TGG | + | chr2_3:52769317-52769336 | Msa0298630:CDS | 30.0% |
ATCACTTGCAAATAACAATG+AGG | + | chr2_3:52769404-52769423 | Msa0298630:CDS | 30.0% | |
! | CTTTTGTATCAGATCAATGA+TGG | + | chr2_3:52769719-52769738 | Msa0298630:intron | 30.0% |
AGCATGCATATAAGATCAAT+TGG | - | chr2_3:52769973-52769992 | None:intergenic | 30.0% | |
AATTACCTGAAAAGAGCTTA+TGG | + | chr2_3:52770295-52770314 | Msa0298630:intron | 30.0% | |
ATTACCTGAAAAGAGCTTAT+GGG | + | chr2_3:52770296-52770315 | Msa0298630:intron | 30.0% | |
ACACTCAAACCAGAATAAAA+TGG | + | chr2_3:52770482-52770501 | Msa0298630:intron | 30.0% | |
AAGATAATTTGGACATTAGG+GGG | + | chr2_3:52770683-52770702 | Msa0298630:intron | 30.0% | |
GTTGAAATTCGCTTATTATG+GGG | - | chr2_3:52771095-52771114 | None:intergenic | 30.0% | |
AATTACCTGAAATGAGCTTA+TGG | + | chr2_3:52771237-52771256 | Msa0298630:intron | 30.0% | |
AAGCACTATTGAGACTATTT+GGG | - | chr2_3:52771278-52771297 | None:intergenic | 30.0% | |
TAAGCACTATTGAGACTATT+TGG | - | chr2_3:52771279-52771298 | None:intergenic | 30.0% | |
!!! | TTTTTTACGTCTCTATGCTA+AGG | - | chr2_3:52771449-52771468 | None:intergenic | 30.0% |
! | CAGCTTGATAACTTTAATTC+GGG | - | chr2_3:52771525-52771544 | None:intergenic | 30.0% |
! | ACATGTAACATAATTTGCAC+AGG | + | chr2_3:52771573-52771592 | Msa0298630:intron | 30.0% |
!! | GAAGTCCTGAAAATTTTGAT+TGG | - | chr2_3:52771960-52771979 | None:intergenic | 30.0% |
GCTGCTATTACTTCAATTAT+TGG | + | chr2_3:52772084-52772103 | Msa0298630:CDS | 30.0% | |
CTAGTACCGTTATTATTGTT+TGG | - | chr2_3:52772120-52772139 | None:intergenic | 30.0% | |
AATAACGGTACTAGCAATAA+TGG | + | chr2_3:52772126-52772145 | Msa0298630:CDS | 30.0% | |
ACAATAGCTAACAACACTAA+TGG | + | chr2_3:52772156-52772175 | Msa0298630:CDS | 30.0% | |
ACATCAAGTAACAATACCAT+TGG | + | chr2_3:52772186-52772205 | Msa0298630:CDS | 30.0% | |
!!! | AGTTGGGATTGTTGATTTTA+GGG | - | chr2_3:52772215-52772234 | None:intergenic | 30.0% |
!!! | TTTTTGAGGTTGTTGTGTTG+AGG | - | chr2_3:52768132-52768151 | None:intergenic | 35.0% |
ACAACCTCAAAAACTTCAAG+TGG | + | chr2_3:52768139-52768158 | Msa0298630:CDS | 35.0% | |
! | GTTTCCACTTGAAGTTTTTG+AGG | - | chr2_3:52768146-52768165 | None:intergenic | 35.0% |
!! | AGGGTTGATGAGATATTTCA+TGG | - | chr2_3:52768228-52768247 | None:intergenic | 35.0% |
GGTCTCATTTCATGATCAAA+GGG | - | chr2_3:52768247-52768266 | None:intergenic | 35.0% | |
AGGTCTCATTTCATGATCAA+AGG | - | chr2_3:52768248-52768267 | None:intergenic | 35.0% | |
ACTTTGAATTCCAAGAGAGA+AGG | - | chr2_3:52768400-52768419 | None:intergenic | 35.0% | |
AACATATGGCCACAATATCA+AGG | - | chr2_3:52768499-52768518 | None:intergenic | 35.0% | |
CAAATGAGTTAATCACCCTT+TGG | + | chr2_3:52768593-52768612 | Msa0298630:intron | 35.0% | |
AAGCAATGATCAATCCATGA+TGG | + | chr2_3:52768932-52768951 | Msa0298630:CDS | 35.0% | |
TTGACGAGGAGAAACAAAAT+GGG | + | chr2_3:52769283-52769302 | Msa0298630:CDS | 35.0% | |
ACAATTTATGGAGCTTGGAT+TGG | + | chr2_3:52769329-52769348 | Msa0298630:CDS | 35.0% | |
TTTGACTGATCTTGACTTCT+TGG | - | chr2_3:52769384-52769403 | None:intergenic | 35.0% | |
TAACAATGAGGAAGATTCCA+AGG | + | chr2_3:52769416-52769435 | Msa0298630:CDS | 35.0% | |
TGTGTCTGATCATGAAAAGA+AGG | + | chr2_3:52769449-52769468 | Msa0298630:CDS | 35.0% | |
ATGAAAAGAAGGAATCCGAT+CGG | + | chr2_3:52769460-52769479 | Msa0298630:CDS | 35.0% | |
GCTTGTTCAACATTTGTTTG+AGG | - | chr2_3:52769564-52769583 | None:intergenic | 35.0% | |
AACAAATGTTGAACAAGCTG+AGG | + | chr2_3:52769566-52769585 | Msa0298630:CDS | 35.0% | |
!! | AGATCAATGATGGATGTCAA+TGG | + | chr2_3:52769729-52769748 | Msa0298630:intron | 35.0% |
! | TAACATACCTGTTTTCTCAC+AGG | - | chr2_3:52769833-52769852 | None:intergenic | 35.0% |
GGCACTGTTATAATATGTCA+TGG | + | chr2_3:52769890-52769909 | Msa0298630:intron | 35.0% | |
! | TAGTAGAAGTACATGAGCTA+TGG | - | chr2_3:52770022-52770041 | None:intergenic | 35.0% |
! | AGCTTGAGATTGATTTAGCT+AGG | + | chr2_3:52770054-52770073 | Msa0298630:intron | 35.0% |
AAACATGTGCCATGATTGAT+TGG | - | chr2_3:52770102-52770121 | None:intergenic | 35.0% | |
TATAAAACAGACCCCTAATG+AGG | + | chr2_3:52770386-52770405 | Msa0298630:intron | 35.0% | |
ACTACAGTAACAACCAAAGT+TGG | + | chr2_3:52770431-52770450 | Msa0298630:intron | 35.0% | |
CTACAGTAACAACCAAAGTT+GGG | + | chr2_3:52770432-52770451 | Msa0298630:intron | 35.0% | |
ATTGTCATTAAACTGGAGGT+TGG | + | chr2_3:52770545-52770564 | Msa0298630:intron | 35.0% | |
! | TCAAACTCTTAAGGTGCTTT+CGG | - | chr2_3:52770615-52770634 | None:intergenic | 35.0% |
ACCATTTGAGTCCAATGATT+TGG | + | chr2_3:52771148-52771167 | Msa0298630:intron | 35.0% | |
ACCAAATCATTGGACTCAAA+TGG | - | chr2_3:52771152-52771171 | None:intergenic | 35.0% | |
!! | TTTGAGTCCAATGATTTGGT+TGG | + | chr2_3:52771152-52771171 | Msa0298630:intron | 35.0% |
ACTTTGACCAACCAAATCAT+TGG | - | chr2_3:52771162-52771181 | None:intergenic | 35.0% | |
! | CATAATTTGCACAGGTACAA+AGG | + | chr2_3:52771581-52771600 | Msa0298630:intron | 35.0% |
! | TGTTGTTTGTACCATTTCCA+TGG | - | chr2_3:52771677-52771696 | None:intergenic | 35.0% |
TTGCTCTTGTGAGGTAATTT+GGG | - | chr2_3:52771759-52771778 | None:intergenic | 35.0% | |
ATTGCTCTTGTGAGGTAATT+TGG | - | chr2_3:52771760-52771779 | None:intergenic | 35.0% | |
CTATGCTTGAAGAATAAGGA+AGG | - | chr2_3:52771783-52771802 | None:intergenic | 35.0% | |
GTTGCTATGCTTGAAGAATA+AGG | - | chr2_3:52771787-52771806 | None:intergenic | 35.0% | |
TCCATTTCCAACTGTTACAT+TGG | + | chr2_3:52771822-52771841 | Msa0298630:CDS | 35.0% | |
TCCAATGTAACAGTTGGAAA+TGG | - | chr2_3:52771826-52771845 | None:intergenic | 35.0% | |
!! | AATTTTGAGGGAAGGGAAAT+TGG | - | chr2_3:52771903-52771922 | None:intergenic | 35.0% |
! | AATTTTCTGCCTCAGGTATT+TGG | + | chr2_3:52771919-52771938 | Msa0298630:CDS | 35.0% |
GCACAGCCAAACAATAATAA+CGG | + | chr2_3:52772111-52772130 | Msa0298630:CDS | 35.0% | |
!!! | GAGTTGGGATTGTTGATTTT+AGG | - | chr2_3:52772216-52772235 | None:intergenic | 35.0% |
TGATGAAGATTTAGTGAGGG+AGG | - | chr2_3:52768343-52768362 | None:intergenic | 40.0% | |
GAATTCCAAGAGAGAAGGAT+CGG | - | chr2_3:52768395-52768414 | None:intergenic | 40.0% | |
GGATTGATCATTGCTTGTGT+TGG | - | chr2_3:52768928-52768947 | None:intergenic | 40.0% | |
CAATGATCAATCCATGATGG+AGG | + | chr2_3:52768935-52768954 | Msa0298630:CDS | 40.0% | |
AGACAAAAGAGCTAAGCTTG+AGG | + | chr2_3:52768980-52768999 | Msa0298630:CDS | 40.0% | |
ACATGCTTGATGAGGGTAAT+AGG | + | chr2_3:52769163-52769182 | Msa0298630:CDS | 40.0% | |
ACAACACATTGCAGATGCAT+TGG | + | chr2_3:52769190-52769209 | Msa0298630:CDS | 40.0% | |
GAAGAGCAAAAGCAAGTGAT+TGG | + | chr2_3:52769252-52769271 | Msa0298630:CDS | 40.0% | |
CTTGACGAGGAGAAACAAAA+TGG | + | chr2_3:52769282-52769301 | Msa0298630:CDS | 40.0% | |
GAGGAGAAACAAAATGGGAA+TGG | + | chr2_3:52769288-52769307 | Msa0298630:CDS | 40.0% | |
GAGAAACAAAATGGGAATGG+TGG | + | chr2_3:52769291-52769310 | Msa0298630:CDS | 40.0% | |
!! | AAATGGGAATGGTGGAGTTT+TGG | + | chr2_3:52769299-52769318 | Msa0298630:CDS | 40.0% |
CCAAGCTCCATAAATTGTCT+TGG | - | chr2_3:52769327-52769346 | None:intergenic | 40.0% | |
CCAAGACAATTTATGGAGCT+TGG | + | chr2_3:52769324-52769343 | Msa0298630:CDS | 40.0% | |
AGACACAAGTTCTTCAACCT+TGG | - | chr2_3:52769436-52769455 | None:intergenic | 40.0% | |
TGAAAAGAAGGAATCCGATC+GGG | + | chr2_3:52769461-52769480 | Msa0298630:CDS | 40.0% | |
GGATGTCAATGGAGAAAGTA+TGG | + | chr2_3:52769740-52769759 | Msa0298630:CDS | 40.0% | |
! | GAGAAAGTATGGACAGAAGA+TGG | + | chr2_3:52769751-52769770 | Msa0298630:CDS | 40.0% |
AGCTTATTATCGATGCACCA+TGG | + | chr2_3:52769796-52769815 | Msa0298630:CDS | 40.0% | |
! | TTTTCTCACAGGACAACCTA+AGG | - | chr2_3:52769822-52769841 | None:intergenic | 40.0% |
!! | GCTATAATAGTTGGTGACAC+AGG | + | chr2_3:52769869-52769888 | Msa0298630:intron | 40.0% |
CAGAGTTGAGAACTCAAAAC+AGG | - | chr2_3:52769935-52769954 | None:intergenic | 40.0% | |
GTCTTCAACATTTCGATGCT+AGG | + | chr2_3:52770124-52770143 | Msa0298630:intron | 40.0% | |
! | AACTGGAGGTTGGAGTTTTA+AGG | + | chr2_3:52770555-52770574 | Msa0298630:intron | 40.0% |
ACATGCCATAAGCTCATTTC+AGG | - | chr2_3:52771245-52771264 | None:intergenic | 40.0% | |
ACTAAAACAGACCCCTAATG+AGG | + | chr2_3:52771327-52771346 | Msa0298630:intron | 40.0% | |
ACTTCAACCTACCTCATTAG+GGG | - | chr2_3:52771341-52771360 | None:intergenic | 40.0% | |
GACTTCAACCTACCTCATTA+GGG | - | chr2_3:52771342-52771361 | None:intergenic | 40.0% | |
TGACTTCAACCTACCTCATT+AGG | - | chr2_3:52771343-52771362 | None:intergenic | 40.0% | |
ACTGAAGTAACGACCAAAGT+CGG | + | chr2_3:52771372-52771391 | Msa0298630:intron | 40.0% | |
GTTAGGTCCAATGTAACAGT+TGG | - | chr2_3:52771832-52771851 | None:intergenic | 40.0% | |
!! | TTTGGTTTGGTGACTGAGTT+AGG | - | chr2_3:52771849-52771868 | None:intergenic | 40.0% |
!!! | TTAGGGAACTGGTTTTGGTT+TGG | - | chr2_3:52771862-52771881 | None:intergenic | 40.0% |
!! | GGTTATTAGGGAACTGGTTT+TGG | - | chr2_3:52771867-52771886 | None:intergenic | 40.0% |
AGGGAAATTGGAACTGGTTA+GGG | - | chr2_3:52771891-52771910 | None:intergenic | 40.0% | |
AAGGGAAATTGGAACTGGTT+AGG | - | chr2_3:52771892-52771911 | None:intergenic | 40.0% | |
!! | GGCAGAAAATTTTGAGGGAA+GGG | - | chr2_3:52771910-52771929 | None:intergenic | 40.0% |
!! | AGGCAGAAAATTTTGAGGGA+AGG | - | chr2_3:52771911-52771930 | None:intergenic | 40.0% |
! | CCTGAGGCAGAAAATTTTGA+GGG | - | chr2_3:52771915-52771934 | None:intergenic | 40.0% |
! | ACCTGAGGCAGAAAATTTTG+AGG | - | chr2_3:52771916-52771935 | None:intergenic | 40.0% |
AATGTCTGACCAAATACCTG+AGG | - | chr2_3:52771931-52771950 | None:intergenic | 40.0% | |
TAGCATTAACTGTGTCAGCA+AGG | - | chr2_3:52772029-52772048 | None:intergenic | 40.0% | |
!!! | GTTGATTTTAGGGCTTCCAA+TGG | - | chr2_3:52772205-52772224 | None:intergenic | 40.0% |
! | ATTTAGTGAGGGAGGTGTAG+AGG | - | chr2_3:52768335-52768354 | None:intergenic | 45.0% |
TTACACCGATCCTTCTCTCT+TGG | + | chr2_3:52768387-52768406 | Msa0298630:CDS | 45.0% | |
CCACAATATCAAGGTCCACA+TGG | - | chr2_3:52768490-52768509 | None:intergenic | 45.0% | |
CCATGTGGACCTTGATATTG+TGG | + | chr2_3:52768487-52768506 | Msa0298630:intron | 45.0% | |
TGCTATGTCTTCCTCCATCA+TGG | - | chr2_3:52768949-52768968 | None:intergenic | 45.0% | |
CACCTTCATTCTCTCAAGCT+CGG | - | chr2_3:52769124-52769143 | None:intergenic | 45.0% | |
AGGTGGAGAATCATCAACTG+AGG | + | chr2_3:52769139-52769158 | Msa0298630:CDS | 45.0% | |
ACTGAGGAACATGCTTGATG+AGG | + | chr2_3:52769155-52769174 | Msa0298630:CDS | 45.0% | |
CTGAGGAACATGCTTGATGA+GGG | + | chr2_3:52769156-52769175 | Msa0298630:CDS | 45.0% | |
GCAGATGCATTGGATGAGTA+TGG | + | chr2_3:52769200-52769219 | Msa0298630:CDS | 45.0% | |
GAGTATGGTGCAAGACAAGA+AGG | + | chr2_3:52769215-52769234 | Msa0298630:CDS | 45.0% | |
GAGCAAAAGCAAGTGATTGG+TGG | + | chr2_3:52769255-52769274 | Msa0298630:CDS | 45.0% | |
GATTGGTGGAAAACTTGACG+AGG | + | chr2_3:52769269-52769288 | Msa0298630:CDS | 45.0% | |
GAAAAGAAGGAATCCGATCG+GGG | + | chr2_3:52769462-52769481 | Msa0298630:CDS | 45.0% | |
! | GCTTCTTTCTTTTCCCCGAT+CGG | - | chr2_3:52769478-52769497 | None:intergenic | 45.0% |
AACCCTTGCTTTCCTCATAG+TGG | - | chr2_3:52769592-52769611 | None:intergenic | 45.0% | |
! | GAAGTGTACCATGTTAGCCT+CGG | - | chr2_3:52769631-52769650 | None:intergenic | 45.0% |
TATGGACAGAAGATGGCGAA+AGG | + | chr2_3:52769758-52769777 | Msa0298630:CDS | 45.0% | |
GATAATAAGCTCGAGGACAC+GGG | - | chr2_3:52769787-52769806 | None:intergenic | 45.0% | |
CGATAATAAGCTCGAGGACA+CGG | - | chr2_3:52769788-52769807 | None:intergenic | 45.0% | |
! | GTGCATCGATAATAAGCTCG+AGG | - | chr2_3:52769794-52769813 | None:intergenic | 45.0% |
AGGTTGTCCTGTGAGAAAAC+AGG | + | chr2_3:52769823-52769842 | Msa0298630:CDS | 45.0% | |
TTTCGATGCTAGGCCATGTT+TGG | + | chr2_3:52770134-52770153 | Msa0298630:intron | 45.0% | |
ACCTGAAAAGAGCTTATGGG+TGG | + | chr2_3:52770299-52770318 | Msa0298630:intron | 45.0% | |
CCTGAAAAGAGCTTATGGGT+GGG | + | chr2_3:52770300-52770319 | Msa0298630:intron | 45.0% | |
AAACAGACCCCTAATGAGGT+AGG | + | chr2_3:52770390-52770409 | Msa0298630:intron | 45.0% | |
GCTTCAACCTACCTCATTAG+GGG | - | chr2_3:52770400-52770419 | None:intergenic | 45.0% | |
GGCTTCAACCTACCTCATTA+GGG | - | chr2_3:52770401-52770420 | None:intergenic | 45.0% | |
TGGCTTCAACCTACCTCATT+AGG | - | chr2_3:52770402-52770421 | None:intergenic | 45.0% | |
! | CAAGAAGTACGACCCAACTT+TGG | - | chr2_3:52770447-52770466 | None:intergenic | 45.0% |
AAACAGACCCCTAATGAGGT+AGG | + | chr2_3:52770390-52770409 | Msa0298630:intron | 45.0% | |
CTGAAGTAACGACCAAAGTC+GGG | + | chr2_3:52771373-52771392 | Msa0298630:intron | 45.0% | |
CAAGAATTGTGACCCGACTT+TGG | - | chr2_3:52771388-52771407 | None:intergenic | 45.0% | |
GCTGCAAGAATGTTACTGTC+AGG | + | chr2_3:52771703-52771722 | Msa0298630:CDS | 45.0% | |
AGTCCATCAGCACTTGTCAT+TGG | - | chr2_3:52771730-52771749 | None:intergenic | 45.0% | |
AAGGAAGGATTGCTCTTGTG+AGG | - | chr2_3:52771768-52771787 | None:intergenic | 45.0% | |
ACTGGTTAGGGGGGTTATTA+GGG | - | chr2_3:52771879-52771898 | None:intergenic | 45.0% | |
AACTGGTTAGGGGGGTTATT+AGG | - | chr2_3:52771880-52771899 | None:intergenic | 45.0% | |
GAAATTGGAACTGGTTAGGG+GGG | - | chr2_3:52771888-52771907 | None:intergenic | 45.0% | |
GGAAATTGGAACTGGTTAGG+GGG | - | chr2_3:52771889-52771908 | None:intergenic | 45.0% | |
GGGAAATTGGAACTGGTTAG+GGG | - | chr2_3:52771890-52771909 | None:intergenic | 45.0% | |
! | CCCTCAAAATTTTCTGCCTC+AGG | + | chr2_3:52771912-52771931 | Msa0298630:CDS | 45.0% |
TCCTAACTTCACTGCAGCTT+TGG | + | chr2_3:52772059-52772078 | Msa0298630:CDS | 45.0% | |
!! | AAATTTATAAAGTAAAAATA+TGG | - | chr2_3:52768780-52768799 | None:intergenic | 5.0% |
!!! | TATTTTTACTTTATAAATTT+TGG | + | chr2_3:52768780-52768799 | Msa0298630:intron | 5.0% |
AGGCAGATGCAAGGTTGTGA+TGG | - | chr2_3:52768309-52768328 | None:intergenic | 50.0% | |
TAGAGGTAGAGGCAGATGCA+AGG | - | chr2_3:52768318-52768337 | None:intergenic | 50.0% | |
AGCCGAGCTTGAGAGAATGA+AGG | + | chr2_3:52769119-52769138 | Msa0298630:CDS | 50.0% | |
CGAGCTTGAGAGAATGAAGG+TGG | + | chr2_3:52769122-52769141 | Msa0298630:CDS | 50.0% | |
GGTGCAAGACAAGAAGGTAG+AGG | + | chr2_3:52769221-52769240 | Msa0298630:CDS | 50.0% | |
GCAGCTAAAACTCGATCTGC+AGG | - | chr2_3:52769507-52769526 | None:intergenic | 50.0% | |
AACAAGCTGAGGCCACTATG+AGG | + | chr2_3:52769577-52769596 | Msa0298630:CDS | 50.0% | |
AGGCCACTATGAGGAAAGCA+AGG | + | chr2_3:52769586-52769605 | Msa0298630:CDS | 50.0% | |
GGCCACTATGAGGAAAGCAA+GGG | + | chr2_3:52769587-52769606 | Msa0298630:CDS | 50.0% | |
TTCAGTTAGAGCTCGATCCG+AGG | + | chr2_3:52769611-52769630 | Msa0298630:CDS | 50.0% | |
TATCGATGCACCATGGCCTT+AGG | + | chr2_3:52769803-52769822 | Msa0298630:CDS | 50.0% | |
! | CCCACCCATAAGCTCTTTTC+AGG | - | chr2_3:52770303-52770322 | None:intergenic | 50.0% |
!! | ACATTAGGGGGTGCTTGTAG+CGG | + | chr2_3:52770695-52770714 | Msa0298630:intron | 50.0% |
CTGGAGGCAAAGCATGAATG+TGG | - | chr2_3:52771651-52771670 | None:intergenic | 50.0% | |
TGTACCATTTCCATGGCTGC+TGG | - | chr2_3:52771670-52771689 | None:intergenic | 50.0% | |
!! | GGACCAATGACAAGTGCTGA+TGG | + | chr2_3:52771724-52771743 | Msa0298630:CDS | 50.0% |
TAGGGGGGTTATTAGGGAAC+TGG | - | chr2_3:52771873-52771892 | None:intergenic | 50.0% | |
GAGGGAAGGGAAATTGGAAC+TGG | - | chr2_3:52771897-52771916 | None:intergenic | 50.0% | |
ACTGTGTCAGCAAGGTTCTG+TGG | - | chr2_3:52772021-52772040 | None:intergenic | 50.0% | |
GCCAAAGCTGCAGTGAAGTT+AGG | - | chr2_3:52772063-52772082 | None:intergenic | 50.0% | |
! | TGAGGGAGGTGTAGAGGTAG+AGG | - | chr2_3:52768329-52768348 | None:intergenic | 55.0% |
AGCTCGATCCGAGGCTAACA+TGG | + | chr2_3:52769620-52769639 | Msa0298630:CDS | 55.0% | |
CACAGGACAACCTAAGGCCA+TGG | - | chr2_3:52769816-52769835 | None:intergenic | 55.0% | |
AGGATGCGAGGGTGACATCA+TGG | - | chr2_3:52771472-52771491 | None:intergenic | 55.0% | |
TGATGTCACCCTCGCATCCT+AGG | + | chr2_3:52771472-52771491 | Msa0298630:intron | 55.0% | |
ATGGTTCACGACGGTGACCT+AGG | - | chr2_3:52771492-52771511 | None:intergenic | 55.0% | |
ACCATTTCCATGGCTGCTGG+AGG | - | chr2_3:52771667-52771686 | None:intergenic | 55.0% | |
!! | AGGGGGTGCTTGTAGCGGAT+AGG | + | chr2_3:52770700-52770719 | Msa0298630:intron | 60.0% |
GACGGTGACCTAGGATGCGA+GGG | - | chr2_3:52771483-52771502 | None:intergenic | 60.0% | |
TGCTTTGCCTCCAGCAGCCA+TGG | + | chr2_3:52771657-52771676 | Msa0298630:CDS | 60.0% | |
GCCTCCAGCAGCCATGGAAA+TGG | + | chr2_3:52771663-52771682 | Msa0298630:CDS | 60.0% | |
GGAGAGTCCAAGCCCTCCAC+TGG | - | chr2_3:52768047-52768066 | None:intergenic | 65.0% | |
CGACGGTGACCTAGGATGCG+AGG | - | chr2_3:52771484-52771503 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 52768040 | 52772248 | 52768040 | ID=Msa0298630;Name=Msa0298630 |
chr2_3 | mRNA | 52768040 | 52772248 | 52768040 | ID=Msa0298630-mRNA-1;Parent=Msa0298630;Name=Msa0298630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.4|1|1|1|5|0|595 |
chr2_3 | exon | 52768040 | 52768423 | 52768040 | ID=Msa0298630-mRNA-1:exon:16853;Parent=Msa0298630-mRNA-1 |
chr2_3 | exon | 52768903 | 52769001 | 52768903 | ID=Msa0298630-mRNA-1:exon:16854;Parent=Msa0298630-mRNA-1 |
chr2_3 | exon | 52769105 | 52769641 | 52769105 | ID=Msa0298630-mRNA-1:exon:16855;Parent=Msa0298630-mRNA-1 |
chr2_3 | exon | 52769731 | 52769844 | 52769731 | ID=Msa0298630-mRNA-1:exon:16856;Parent=Msa0298630-mRNA-1 |
chr2_3 | exon | 52771595 | 52772248 | 52771595 | ID=Msa0298630-mRNA-1:exon:16857;Parent=Msa0298630-mRNA-1 |
chr2_3 | CDS | 52768040 | 52768423 | 52768040 | ID=Msa0298630-mRNA-1:cds;Parent=Msa0298630-mRNA-1 |
chr2_3 | CDS | 52768903 | 52769001 | 52768903 | ID=Msa0298630-mRNA-1:cds;Parent=Msa0298630-mRNA-1 |
chr2_3 | CDS | 52769105 | 52769641 | 52769105 | ID=Msa0298630-mRNA-1:cds;Parent=Msa0298630-mRNA-1 |
chr2_3 | CDS | 52769731 | 52769844 | 52769731 | ID=Msa0298630-mRNA-1:cds;Parent=Msa0298630-mRNA-1 |
chr2_3 | CDS | 52771595 | 52772248 | 52771595 | ID=Msa0298630-mRNA-1:cds;Parent=Msa0298630-mRNA-1 |
Gene Sequence |
Protein sequence |