AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0299150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0299150 MtrunA17_Chr2g0323351 80.237 253 13 4 1 219 1 250 1.55e-131 370
Msa0299150 MtrunA17_Chr4g0022931 39.130 276 104 8 1 216 1 272 1.18e-49 162
Msa0299150 MtrunA17_Chr4g0022901 38.235 272 112 6 1 216 1 272 2.99e-49 162
Msa0299150 MtrunA17_Chr2g0323331 54.930 142 52 3 54 195 3 132 2.48e-44 152
Msa0299150 MtrunA17_Chr2g0323331 60.674 89 33 2 105 193 132 218 5.18e-25 100
Msa0299150 MtrunA17_Chr2g0323331 34.524 168 32 5 106 217 221 366 1.03e-16 77.8
Msa0299150 MtrunA17_Chr4g0022911 40.000 215 76 5 1 181 1 196 1.96e-40 139
Msa0299150 MtrunA17_Chr4g0022881 34.071 226 96 5 1 190 1 209 5.96e-34 121
Msa0299150 MtrunA17_Chr2g0323321 91.228 57 4 1 1 57 1 56 1.38e-33 116
Msa0299150 MtrunA17_Chr1g0187761 32.927 246 110 6 1 214 1 223 2.47e-33 120
Msa0299150 MtrunA17_Chr1g0167661 34.746 236 96 6 1 204 1 210 2.75e-33 120
Msa0299150 MtrunA17_Chr1g0167691 35.808 229 87 5 1 195 1 203 4.53e-32 117
Msa0299150 MtrunA17_Chr4g0022891 34.043 235 92 7 1 190 1 217 6.75e-32 116
Msa0299150 MtrunA17_Chr3g0115821 46.610 118 31 1 1 86 1 118 2.58e-31 117
Msa0299150 MtrunA17_Chr2g0323411 50.000 118 27 1 1 86 1 118 9.47e-31 115
Msa0299150 MtrunA17_Chr2g0281071 49.580 119 27 2 1 86 1 119 2.17e-30 114
Msa0299150 MtrunA17_Chr7g0261281 38.983 177 60 3 1 129 1 177 4.42e-30 112
Msa0299150 MtrunA17_Chr4g0048511 47.899 119 29 2 1 86 1 119 7.89e-30 113
Msa0299150 MtrunA17_Chr4g0039971 44.915 118 33 1 1 86 2 119 1.61e-29 112
Msa0299150 MtrunA17_Chr6g0453471 47.458 118 30 1 1 86 1 118 3.64e-29 111
Msa0299150 MtrunA17_Chr5g0410961 47.458 118 30 1 1 86 1 118 1.26e-28 110
Msa0299150 MtrunA17_Chr7g0274581 43.333 120 36 1 1 88 1 120 1.36e-28 106
Msa0299150 MtrunA17_Chr1g0203411 44.828 116 32 1 1 84 1 116 1.52e-28 108
Msa0299150 MtrunA17_Chr4g0042671 47.458 118 30 1 1 86 1 118 2.09e-28 110
Msa0299150 MtrunA17_Chr5g0395281 44.068 118 34 1 1 86 1 118 2.91e-28 108
Msa0299150 MtrunA17_Chr3g0103281 43.966 116 33 1 1 84 1 116 3.22e-28 108
Msa0299150 MtrunA17_Chr4g0058631 36.813 182 66 4 1 149 1 166 4.12e-28 108
Msa0299150 MtrunA17_Chr4g0057031 48.305 118 29 1 1 86 1 118 5.15e-28 107
Msa0299150 MtrunA17_Chr7g0217741 46.610 118 31 1 1 86 1 118 8.11e-28 107
Msa0299150 MtrunA17_Chr6g0452271 43.220 118 35 1 1 86 1 118 2.04e-27 106
Msa0299150 MtrunA17_Chr3g0110351 48.305 118 29 1 1 86 1 118 4.18e-27 105
Msa0299150 MtrunA17_Chr5g0434571 35.514 214 85 6 1 165 37 246 5.20e-27 105
Msa0299150 MtrunA17_Chr2g0309911 44.144 111 30 1 7 85 6 116 3.68e-26 102
Msa0299150 MtrunA17_Chr1g0193371 37.195 164 68 3 1 130 1 163 4.61e-26 103
Msa0299150 MtrunA17_Chr4g0070611 38.776 147 56 2 1 113 1 147 9.51e-26 101
Msa0299150 MtrunA17_Chr3g0117091 43.860 114 31 2 6 86 5 118 9.51e-26 102
Msa0299150 MtrunA17_Chr1g0211161 42.857 119 35 2 1 86 1 119 1.12e-25 99.8
Msa0299150 MtrunA17_Chr3g0131121 45.690 116 31 1 1 84 1 116 1.50e-25 100
Msa0299150 MtrunA17_Chr8g0342541 42.342 111 32 1 7 85 7 117 1.74e-25 101
Msa0299150 MtrunA17_Chr7g0228891 43.966 116 33 1 1 84 1 116 2.14e-25 100
Msa0299150 MtrunA17_Chr4g0037141 43.590 117 34 1 1 85 1 117 2.23e-25 100
Msa0299150 MtrunA17_Chr4g0070641 38.776 147 56 2 1 113 1 147 2.39e-25 97.4
Msa0299150 MtrunA17_Chr1g0152011 38.235 136 51 2 1 103 1 136 2.83e-25 100
Msa0299150 MtrunA17_Chr2g0330041 42.342 111 32 1 7 85 7 117 3.35e-25 101
Msa0299150 MtrunA17_Chr8g0342521 43.243 111 31 1 7 85 7 117 3.52e-25 100
Msa0299150 MtrunA17_Chr3g0135311 36.310 168 68 3 1 135 1 162 4.01e-25 100
Msa0299150 MtrunA17_Chr5g0400821 39.583 144 45 3 1 102 1 144 4.02e-25 100
Msa0299150 MtrunA17_Chr1g0193801 43.966 116 33 1 1 84 1 116 6.27e-25 100
Msa0299150 MtrunA17_Chr4g0060721 37.063 143 58 1 1 111 2 144 7.33e-25 99.8
Msa0299150 MtrunA17_Chr4g0068061 43.103 116 34 1 1 84 1 116 7.86e-25 99.8
Msa0299150 MtrunA17_Chr7g0270891 43.966 116 33 1 1 84 1 116 8.50e-25 100
Msa0299150 MtrunA17_Chr5g0435101 41.026 117 37 1 2 86 1 117 8.65e-25 97.1
Msa0299150 MtrunA17_Chr4g0028311 43.220 118 34 2 1 85 1 118 1.18e-24 99.0
Msa0299150 MtrunA17_Chr7g0217221 42.149 121 38 1 1 89 1 121 1.27e-24 97.8
Msa0299150 MtrunA17_Chr8g0349261 46.218 119 30 3 1 85 1 119 2.16e-24 97.8
Msa0299150 MtrunA17_Chr7g0275911 43.966 116 33 1 1 84 1 116 2.26e-24 97.1
Msa0299150 MtrunA17_Chr5g0417821 48.148 108 24 1 11 86 6 113 2.69e-24 97.4
Msa0299150 MtrunA17_Chr2g0311221 44.444 108 28 1 3 78 5 112 3.33e-24 97.8
Msa0299150 MtrunA17_Chr3g0092401 42.373 118 36 1 1 86 2 119 5.11e-24 97.1
Msa0299150 MtrunA17_Chr8g0385321 43.966 116 33 1 1 84 1 116 5.48e-24 97.1
Msa0299150 MtrunA17_Chr1g0151941 30.846 201 93 4 1 162 1 194 7.57e-24 95.5
Msa0299150 MtrunA17_Chr8g0346561 42.149 121 38 1 1 89 1 121 1.58e-23 95.5
Msa0299150 MtrunA17_Chr7g0269831 43.103 116 34 1 1 84 1 116 2.00e-23 96.3
Msa0299150 MtrunA17_Chr7g0264641 40.678 118 37 2 1 85 1 118 2.39e-23 94.7
Msa0299150 MtrunA17_Chr8g0342481 42.478 113 30 3 7 85 7 118 2.43e-23 96.7
Msa0299150 MtrunA17_Chr3g0121241 43.363 113 32 1 5 85 35 147 2.68e-23 95.1
Msa0299150 MtrunA17_Chr7g0254411 42.373 118 36 1 1 86 1 118 2.70e-23 95.5
Msa0299150 MtrunA17_Chr7g0271241 44.037 109 29 1 1 77 1 109 3.42e-23 95.9
Msa0299150 MtrunA17_Chr6g0453211 43.636 110 30 1 1 78 1 110 4.20e-23 94.7
Msa0299150 MtrunA17_Chr2g0327351 44.144 111 29 2 1 78 1 111 6.24e-23 94.4
Msa0299150 MtrunA17_Chr2g0328771 45.714 105 25 1 12 84 20 124 8.91e-23 94.0
Msa0299150 MtrunA17_Chr1g0194951 42.241 116 35 1 1 84 1 116 1.04e-22 94.4
Msa0299150 MtrunA17_Chr8g0387421 39.496 119 40 1 1 87 1 119 1.06e-22 93.6
Msa0299150 MtrunA17_Chr4g0054391 43.636 110 29 2 1 77 1 110 2.83e-22 92.0
Msa0299150 MtrunA17_Chr4g0032401 43.925 107 28 1 10 84 15 121 5.67e-22 92.0
Msa0299150 MtrunA17_Chr4g0044421 41.525 118 36 2 2 86 1 118 6.43e-22 89.0
Msa0299150 MtrunA17_Chr3g0088461 42.202 109 31 1 8 84 18 126 2.31e-21 90.5
Msa0299150 MtrunA17_Chr5g0397231 40.385 104 30 1 7 78 7 110 4.48e-21 89.7
Msa0299150 MtrunA17_Chr1g0209661 30.417 240 108 8 8 188 23 262 5.30e-21 89.0
Msa0299150 MtrunA17_Chr6g0470971 40.351 114 36 1 7 88 9 122 5.79e-21 88.6
Msa0299150 MtrunA17_Chr4g0072751 38.406 138 50 3 1 103 1 138 8.24e-21 89.0
Msa0299150 MtrunA17_Chr6g0487491 32.298 161 60 3 1 112 1 161 1.87e-20 86.7
Msa0299150 MtrunA17_Chr5g0434911 39.640 111 35 1 7 85 16 126 2.53e-20 86.7
Msa0299150 MtrunA17_Chr1g0180391 43.810 105 27 1 12 84 19 123 3.52e-20 85.1
Msa0299150 MtrunA17_Chr4g0042611 62.069 58 22 0 1 58 1 58 5.82e-20 80.9
Msa0299150 MtrunA17_Chr1g0203441 41.509 106 30 1 13 86 14 119 6.26e-20 85.5
Msa0299150 MtrunA17_Chr5g0434931 40.187 107 32 1 11 85 34 140 6.75e-20 85.5
Msa0299150 MtrunA17_Chr5g0434831 41.121 107 31 1 11 85 6 112 2.25e-19 82.4
Msa0299150 MtrunA17_Chr5g0434841 39.316 117 38 2 2 85 9 125 3.00e-19 84.3
Msa0299150 MtrunA17_Chr5g0395221 58.621 58 24 0 1 58 1 58 4.39e-19 78.6
Msa0299150 MtrunA17_Chr7g0228231 35.032 157 67 3 12 134 14 169 6.34e-19 81.3
Msa0299150 MtrunA17_Chr3g0099131 43.689 103 26 1 12 82 41 143 1.11e-18 84.0
Msa0299150 MtrunA17_Chr8g0342531 61.538 52 20 0 7 58 7 58 2.72e-18 78.6
Msa0299150 MtrunA17_Chr8g0342511 55.172 58 26 0 1 58 1 58 2.87e-18 76.6
Msa0299150 MtrunA17_Chr2g0322521 38.679 106 33 1 9 82 26 131 3.52e-18 82.0
Msa0299150 MtrunA17_Chr3g0080861 40.777 103 29 1 12 82 37 139 3.62e-18 82.4
Msa0299150 MtrunA17_Chr1g0154031 41.748 103 28 1 12 82 76 178 4.17e-18 82.0
Msa0299150 MtrunA17_Chr2g0294811 62.069 58 22 0 1 58 1 58 1.32e-17 75.9
Msa0299150 MtrunA17_Chr7g0228991 38.318 107 34 1 11 85 28 134 2.06e-17 78.6
Msa0299150 MtrunA17_Chr1g0186061 42.500 120 33 3 13 100 21 136 2.37e-17 78.2
Msa0299150 MtrunA17_Chr1g0194291 40.187 107 32 1 8 82 17 123 3.18e-17 77.8
Msa0299150 MtrunA17_Chr5g0440781 37.864 103 31 1 13 82 13 115 7.10e-17 75.5
Msa0299150 MtrunA17_Chr6g0450101 40.952 105 30 1 12 84 14 118 7.92e-17 75.9
Msa0299150 MtrunA17_Chr5g0440761 37.864 103 31 1 13 82 13 115 8.46e-17 76.6
Msa0299150 MtrunA17_Chr5g0441141 37.864 103 31 1 13 82 13 115 8.84e-17 77.0
Msa0299150 MtrunA17_Chr8g0342461 54.098 61 23 2 1 58 1 59 1.51e-16 73.6
Msa0299150 MtrunA17_Chr2g0293911 39.252 107 33 1 8 82 20 126 2.28e-16 76.3
Msa0299150 MtrunA17_Chr8g0342471 52.459 61 24 2 1 58 1 59 5.07e-16 72.0
Msa0299150 MtrunA17_Chr7g0220341 35.345 116 41 2 11 92 24 139 7.70e-16 74.3
Msa0299150 MtrunA17_Chr8g0360111 37.255 102 32 1 11 80 24 125 3.05e-15 72.4
Msa0299150 MtrunA17_Chr5g0425591 62.222 45 17 0 13 57 10 54 4.02e-13 63.2
Msa0299150 MtrunA17_Chr3g0099141 56.863 51 22 0 8 58 36 86 6.32e-13 63.9
Msa0299150 MtrunA17_Chr6g0453751 54.545 55 17 1 11 57 19 73 2.94e-12 61.6
Msa0299150 MtrunA17_Chr5g0429661 30.000 200 85 9 12 173 120 302 4.33e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0299150 AT2G31180.1 35.586 222 83 5 1 190 1 194 5.94e-33 119
Msa0299150 AT4G21440.1 48.305 118 29 1 1 86 1 118 2.13e-32 120
Msa0299150 AT4G28110.1 49.153 118 28 1 1 86 1 118 1.14e-31 117
Msa0299150 AT4G05100.1 51.261 119 25 2 1 86 1 119 3.86e-31 116
Msa0299150 AT3G02940.2 48.305 118 29 1 1 86 1 118 4.23e-31 116
Msa0299150 AT3G02940.1 48.305 118 29 1 1 86 1 118 7.37e-31 115
Msa0299150 AT3G02940.3 48.305 118 29 1 1 86 1 118 7.37e-31 115
Msa0299150 AT5G16770.4 47.458 118 30 1 1 86 1 118 9.88e-31 115
Msa0299150 AT5G16770.3 47.458 118 30 1 1 86 1 118 9.88e-31 115
Msa0299150 AT3G01140.2 49.153 118 28 1 1 86 1 118 1.22e-30 115
Msa0299150 AT5G16770.1 47.458 118 30 1 1 86 1 118 1.82e-30 115
Msa0299150 AT5G16770.2 47.458 118 30 1 1 86 1 118 1.82e-30 115
Msa0299150 AT5G15310.4 48.305 118 29 1 1 86 1 118 1.99e-30 112
Msa0299150 AT3G23250.1 33.778 225 108 5 1 185 1 224 2.05e-30 114
Msa0299150 AT5G15310.1 48.305 118 29 1 1 86 1 118 2.30e-30 114
Msa0299150 AT1G34670.1 47.458 118 30 1 1 86 1 118 2.36e-30 115
Msa0299150 AT5G15310.2 48.305 118 29 1 1 86 1 118 2.69e-30 114
Msa0299150 AT3G01140.1 48.305 118 29 1 1 86 44 161 6.27e-30 114
Msa0299150 AT5G10280.1 46.610 118 31 1 1 86 1 118 7.52e-30 113
Msa0299150 AT1G18570.1 43.919 148 47 4 1 113 1 147 9.41e-30 113
Msa0299150 AT5G65230.1 46.610 118 31 1 1 86 1 118 1.32e-29 112
Msa0299150 AT3G61250.1 48.718 117 28 1 1 85 1 117 1.37e-29 112
Msa0299150 AT1G74080.1 48.305 118 29 1 1 86 1 118 2.38e-29 112
Msa0299150 AT5G60890.1 47.414 116 29 1 1 84 1 116 5.24e-29 110
Msa0299150 AT5G56110.1 44.828 116 32 1 1 84 1 116 1.70e-28 109
Msa0299150 AT1G06180.1 47.414 116 29 1 1 84 1 116 7.22e-28 106
Msa0299150 AT5G07700.1 44.538 119 34 1 1 87 1 119 7.80e-28 108
Msa0299150 AT5G07700.2 44.538 119 34 1 1 87 1 119 7.80e-28 108
Msa0299150 AT4G22680.1 48.305 118 29 1 1 86 1 118 8.36e-28 106
Msa0299150 AT1G79180.1 42.975 121 37 1 3 91 5 125 9.00e-28 107
Msa0299150 AT2G16720.1 41.304 138 47 2 1 104 1 138 2.27e-27 105
Msa0299150 AT4G17785.2 45.378 119 32 2 1 86 1 119 2.46e-27 107
Msa0299150 AT4G12350.1 48.305 118 29 1 1 86 1 118 2.53e-27 105
Msa0299150 AT5G07690.1 45.299 117 32 1 1 85 1 117 2.60e-27 106
Msa0299150 AT4G17785.1 45.378 119 32 2 1 86 1 119 2.83e-27 107
Msa0299150 AT1G57560.1 45.763 118 32 1 1 86 1 118 4.00e-27 105
Msa0299150 AT5G61420.2 44.915 118 33 1 1 86 1 118 4.18e-27 106
Msa0299150 AT1G57560.2 45.763 118 32 1 1 86 1 118 4.69e-27 104
Msa0299150 AT1G66230.1 38.922 167 51 3 1 122 1 161 1.27e-26 103
Msa0299150 AT5G16600.1 47.458 118 30 1 1 86 1 118 1.58e-26 104
Msa0299150 AT4G38620.1 37.423 163 66 2 1 131 1 159 1.93e-26 103
Msa0299150 AT4G34990.1 43.220 118 35 1 1 86 1 118 6.40e-26 101
Msa0299150 AT1G22640.1 42.735 117 35 1 1 85 1 117 6.99e-26 101
Msa0299150 AT1G56160.1 43.860 114 32 1 3 84 5 118 7.42e-26 102
Msa0299150 AT1G35515.1 43.590 117 34 1 1 85 1 117 9.21e-26 100
Msa0299150 AT5G26660.1 35.567 194 73 5 1 161 1 175 1.15e-25 102
Msa0299150 AT4G09460.1 43.590 117 34 1 1 85 1 117 1.69e-25 99.8
Msa0299150 AT4G01680.3 44.828 116 32 1 1 84 1 116 1.69e-25 100
Msa0299150 AT1G16490.1 43.860 114 32 1 3 84 5 118 1.86e-25 100
Msa0299150 AT5G62470.2 38.356 146 55 2 1 111 1 146 1.98e-25 102
Msa0299150 AT5G57620.1 42.063 126 40 2 1 93 1 126 2.36e-25 101
Msa0299150 AT4G01680.1 44.828 116 32 1 1 84 1 116 4.39e-25 100
Msa0299150 AT5G54230.1 46.729 107 25 1 12 86 12 118 4.81e-25 100
Msa0299150 AT5G62320.1 44.715 123 29 3 3 86 4 126 4.83e-25 99.0
Msa0299150 AT3G13540.1 37.410 139 53 2 4 110 15 151 1.17e-24 97.8
Msa0299150 AT1G09540.1 35.802 162 70 2 1 128 1 162 1.21e-24 100
Msa0299150 AT3G47600.1 43.220 118 35 1 1 86 1 118 2.16e-24 99.0
Msa0299150 AT3G28910.1 44.068 118 34 1 1 86 1 118 2.21e-24 98.6
Msa0299150 AT3G49690.1 44.068 118 33 2 1 85 1 118 2.33e-24 98.6
Msa0299150 AT3G12820.1 41.379 116 36 1 3 86 5 120 3.05e-24 96.7
Msa0299150 AT3G62610.1 43.103 116 34 1 1 84 1 116 3.25e-24 98.6
Msa0299150 AT1G08810.1 38.462 143 51 2 1 106 1 143 3.84e-24 97.4
Msa0299150 AT3G13890.2 41.441 111 33 1 7 85 7 117 3.85e-24 98.6
Msa0299150 AT1G74430.1 41.525 118 37 1 1 86 1 118 4.16e-24 97.1
Msa0299150 AT3G12720.1 40.541 111 34 1 7 85 17 127 6.11e-24 97.1
Msa0299150 AT5G62470.1 38.356 146 54 3 1 111 1 145 7.36e-24 97.8
Msa0299150 AT5G23000.1 42.373 118 35 2 1 85 1 118 7.59e-24 97.4
Msa0299150 AT3G28470.1 43.636 110 30 1 1 78 1 110 1.32e-23 96.7
Msa0299150 AT2G47460.1 41.379 116 36 1 1 84 1 116 3.42e-23 96.3
Msa0299150 AT5G65790.1 42.149 121 37 2 1 88 1 121 3.53e-23 96.3
Msa0299150 AT2G36890.1 43.220 118 34 2 1 85 1 118 4.55e-23 94.7
Msa0299150 AT2G36890.2 43.220 118 34 2 1 85 42 159 5.24e-23 95.1
Msa0299150 AT5G49330.1 41.379 116 36 1 1 84 1 116 7.30e-23 94.7
Msa0299150 AT4G37780.1 38.710 124 43 2 1 91 1 124 7.64e-23 94.4
Msa0299150 AT1G63910.1 41.071 112 34 1 7 86 7 118 1.74e-22 94.4
Msa0299150 AT1G74650.1 40.833 120 39 1 1 88 1 120 1.82e-22 93.6
Msa0299150 AT5G14340.1 41.379 116 36 1 1 84 13 128 1.82e-22 92.8
Msa0299150 AT1G18710.1 39.655 116 38 1 1 84 1 116 3.19e-22 92.0
Msa0299150 AT4G01680.2 40.625 128 32 2 1 84 1 128 8.68e-22 92.0
Msa0299150 AT4G25560.1 42.149 121 36 3 1 89 1 119 2.35e-21 89.7
Msa0299150 AT3G13890.1 38.333 120 33 2 7 85 7 126 3.56e-21 90.5
Msa0299150 AT5G12870.1 42.991 107 29 1 12 86 18 124 2.36e-20 87.0
Msa0299150 AT3G48920.1 39.062 128 35 2 13 108 19 135 5.29e-20 85.9
Msa0299150 AT5G52260.1 35.338 133 54 1 1 101 1 133 3.91e-19 83.6
Msa0299150 AT3G30210.1 33.166 199 84 6 11 166 26 218 3.93e-19 83.6
Msa0299150 AT3G27920.1 30.457 197 94 5 13 166 15 211 4.71e-19 82.4
Msa0299150 AT3G08500.1 41.905 105 29 1 12 84 30 134 5.82e-19 84.3
Msa0299150 AT5G35550.1 36.975 119 43 1 12 98 14 132 9.46e-19 82.4
Msa0299150 AT5G40350.1 38.333 120 42 1 12 99 17 136 1.11e-18 81.3
Msa0299150 AT5G14750.1 32.653 147 66 2 10 123 14 160 3.10e-18 79.7
Msa0299150 AT5G55020.1 41.905 105 29 1 12 84 26 130 9.08e-18 81.6
Msa0299150 AT5G40330.1 38.462 104 32 1 13 84 13 116 9.21e-18 79.0
Msa0299150 AT5G06100.1 40.187 107 32 1 8 82 28 134 9.89e-18 81.3
Msa0299150 AT1G48000.1 38.793 116 37 2 12 93 32 147 9.94e-18 79.3
Msa0299150 AT2G32460.1 38.739 111 36 1 4 82 10 120 1.05e-17 81.3
Msa0299150 AT2G32460.2 40.385 104 30 1 11 82 5 108 1.25e-17 81.3
Msa0299150 AT5G06100.5 40.187 107 32 1 8 82 28 134 1.30e-17 81.3
Msa0299150 AT5G06100.2 40.187 107 32 1 8 82 28 134 1.30e-17 81.3
Msa0299150 AT5G06100.3 40.187 107 32 1 8 82 28 134 1.30e-17 81.3
Msa0299150 AT5G06100.4 40.187 107 32 1 8 82 28 134 1.30e-17 81.3
Msa0299150 AT4G13480.1 40.708 113 35 1 13 93 7 119 2.66e-17 78.6
Msa0299150 AT3G11440.2 40.777 103 29 1 12 82 41 143 3.17e-17 80.1
Msa0299150 AT4G26930.1 41.748 103 28 1 12 82 19 121 3.24e-17 79.7
Msa0299150 AT3G11440.3 40.777 103 29 1 12 82 41 143 4.21e-17 79.7
Msa0299150 AT3G11440.4 40.777 103 29 1 12 82 41 143 4.21e-17 79.7
Msa0299150 AT3G11440.1 40.777 103 29 1 12 82 41 143 4.21e-17 79.7
Msa0299150 AT3G27810.1 40.952 105 30 1 12 84 20 124 4.27e-17 77.4
Msa0299150 AT3G24310.1 42.308 104 28 1 11 82 17 120 5.40e-17 77.8
Msa0299150 AT1G66380.1 39.423 104 31 1 11 82 7 110 5.40e-17 75.1
Msa0299150 AT1G56650.1 29.091 220 105 7 11 192 7 213 6.56e-17 77.0
Msa0299150 AT1G66390.1 39.423 104 31 1 11 82 7 110 8.17e-17 77.0
Msa0299150 AT2G26960.1 38.679 106 33 1 9 82 17 122 2.40e-16 77.4
Msa0299150 AT1G66370.1 35.385 130 47 2 11 108 7 131 2.66e-16 75.5
Msa0299150 AT3G06490.1 39.252 107 33 1 8 82 15 121 3.55e-16 76.3
Msa0299150 AT1G66380.2 59.574 47 19 0 11 57 7 53 4.09e-12 61.2

Find 47 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACATTTCTCCAAGTTTAT+TGG 0.167900 2_3:+53667181 None:intergenic
TATGAGCTGTCTATTATAAA+TGG 0.180174 2_3:+53666966 None:intergenic
AACATTTCTCCAAGTTTATT+GGG 0.260110 2_3:+53667182 None:intergenic
ATCCTCTTGCATAGCATTAA+TGG 0.275258 2_3:-53667099 Msa0299150:CDS
TGTTGTACTTTGAAATAAAA+TGG 0.292520 2_3:-53666750 Msa0299150:three_prime_UTR
AGACTGTGAGTGAAAATTTC+TGG 0.302943 2_3:-53666995 Msa0299150:CDS
TCCATGTATGCATCCATAAA+AGG 0.332422 2_3:+53667017 None:intergenic
CTTGTAGATGGTTGTGAATA+TGG 0.339437 2_3:+53667125 None:intergenic
CAACGAGCCTATAGAGAATA+TGG 0.340863 2_3:-53669710 Msa0299150:exon
CGACAACTACCTAAATTTGC+AGG 0.368724 2_3:-53669580 Msa0299150:intron
AGTAATATAGAATCTTCATT+TGG 0.389173 2_3:+53666936 None:intergenic
CTAGGTATGGCTGTTGGAAT+TGG 0.399200 2_3:-53669603 Msa0299150:CDS
CACACACTCATACTAAGAAT+TGG 0.412904 2_3:-53669755 Msa0299150:five_prime_UTR
CAAAGTTCTGCATCGTATAC+AGG 0.413524 2_3:+53666894 None:intergenic
GTTCTCACCATATTCTCTAT+AGG 0.417819 2_3:+53669703 None:intergenic
ATATGGTGGACTCGTAATAT+TGG 0.418710 2_3:+53667142 None:intergenic
ATTGCTTATGTAACTAGGTA+TGG 0.467457 2_3:-53669616 Msa0299150:CDS
ATGAGCTGTCTATTATAAAT+GGG 0.472463 2_3:+53666967 None:intergenic
AGTTGATTGCTTATGTAACT+AGG 0.476172 2_3:-53669621 Msa0299150:CDS
ATCTCGTTATCTGTTCTCCC+TGG 0.480667 2_3:+53667323 None:intergenic
ATAAATCGTTACTGTAATGT+GGG 0.483206 2_3:-53666859 Msa0299150:exon
CAAGAGGATGCACTTGTAGA+TGG 0.483657 2_3:+53667113 None:intergenic
AAATGATGTTATATTATCTA+CGG 0.486194 2_3:+53666814 None:intergenic
ATGATTTCTGCAAATTTACC+AGG 0.505480 2_3:-53667341 Msa0299150:CDS
AATAAATCGTTACTGTAATG+TGG 0.506570 2_3:-53666860 Msa0299150:exon
CTGTATACGATGCAGAACTT+TGG 0.512601 2_3:-53666893 Msa0299150:CDS
GTGGGAAGAGTTGTAGACTA+AGG 0.513007 2_3:-53669433 Msa0299150:intron
ATAACGAGATAAAGAACTAC+TGG 0.513695 2_3:-53667310 Msa0299150:CDS
AATATAGAATCTTCATTTGG+AGG 0.536505 2_3:+53666939 None:intergenic
CATATTCTCTATAGGCTCGT+TGG 0.541305 2_3:+53669711 None:intergenic
AATGATGTTATATTATCTAC+GGG 0.542946 2_3:+53666815 None:intergenic
ATATAGAATCTTCATTTGGA+GGG 0.545886 2_3:+53666940 None:intergenic
ATCCATTAATGCTATGCAAG+AGG 0.579170 2_3:+53667097 None:intergenic
TTGCAGGTCTTGAAAGGTGT+GGG 0.585999 2_3:-53669451 Msa0299150:intron
GATGCAGAACTTTGGAGCCA+TGG 0.601687 2_3:-53666885 Msa0299150:CDS
TACTAAGAATTGGTAGAAGT+AGG 0.606679 2_3:-53669745 Msa0299150:five_prime_UTR
ATGTAACTAGGTATGGCTGT+TGG 0.609352 2_3:-53669609 Msa0299150:CDS
TAAATCGTTACTGTAATGTG+GGG 0.612933 2_3:-53666858 Msa0299150:three_prime_UTR
TTTGCAGGTCTTGAAAGGTG+TGG 0.623855 2_3:-53669452 Msa0299150:intron
TGTATGCATCCATAAAAGGA+AGG 0.631015 2_3:+53667021 None:intergenic
TGATTTCTGCAAATTTACCA+GGG 0.632820 2_3:-53667340 Msa0299150:CDS
AATAAGTCAAACGCTAAACG+TGG 0.646068 2_3:-53667257 Msa0299150:CDS
ATGGACTAAGGAAAGGCACA+TGG 0.649764 2_3:-53669663 Msa0299150:CDS
AAATCGTTACTGTAATGTGG+GGG 0.675282 2_3:-53666857 Msa0299150:three_prime_UTR
CAATTCTTAGTATGAGTGTG+TGG 0.680103 2_3:+53669756 None:intergenic
GAAAGGCACATGGACACCTG+AGG 0.692550 2_3:-53669653 Msa0299150:CDS
GTAGATGGTTGTGAATATGG+TGG 0.730389 2_3:+53667128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTATTTTTCTTACA+TGG + chr2_3:53668607-53668626 None:intergenic 10.0%
!! TTGTAACAAAAAAAAAAAAA+TGG - chr2_3:53669825-53669844 Msa0299150:five_prime_UTR 10.0%
!!! TATAGATACAATAACTTTTT+TGG + chr2_3:53667486-53667505 None:intergenic 15.0%
!! CAAAATATAAAATAATCAGA+GGG + chr2_3:53667638-53667657 None:intergenic 15.0%
!! AATAATAGATAAATAAAGGA+AGG + chr2_3:53668274-53668293 None:intergenic 15.0%
!!! TTCCTTTATTTATCTATTAT+TGG - chr2_3:53668273-53668292 Msa0299150:intron 15.0%
!!! AATTTTACTTTTTAAGAGAT+GGG + chr2_3:53668460-53668479 None:intergenic 15.0%
!!! AAATTTTACTTTTTAAGAGA+TGG + chr2_3:53668461-53668480 None:intergenic 15.0%
!! ATATGTAATTATTAAAGGAA+GGG + chr2_3:53668519-53668538 None:intergenic 15.0%
!!! TTTTAATCTATTTTGACATA+AGG - chr2_3:53668547-53668566 Msa0299150:intron 15.0%
!! AATAACAATTAAATTATCGT+TGG + chr2_3:53668719-53668738 None:intergenic 15.0%
!! GAAACAATATAAAATTATCA+TGG + chr2_3:53668770-53668789 None:intergenic 15.0%
!! CAAACTTTGATTATATAAAA+TGG - chr2_3:53668839-53668858 Msa0299150:intron 15.0%
!! CACAATTAATATAAATCATT+TGG + chr2_3:53669173-53669192 None:intergenic 15.0%
!! AAATGATGTTATATTATCTA+CGG + chr2_3:53669733-53669752 None:intergenic 15.0%
!! TTATAAAAACAACACAAAAT+AGG + chr2_3:53669760-53669779 None:intergenic 15.0%
!!! TTTTTTATACCTGCAAATTT+AGG + chr2_3:53666976-53666995 None:intergenic 20.0%
!! ATCAAACTTCATGAAAAATT+GGG - chr2_3:53667200-53667219 Msa0299150:CDS 20.0%
!!! ACAGATTTTATTGATAGTTA+CGG + chr2_3:53667383-53667402 None:intergenic 20.0%
!!! TAGTGAAGAATTATTTTGTT+GGG + chr2_3:53667456-53667475 None:intergenic 20.0%
!!! TTAGTGAAGAATTATTTTGT+TGG + chr2_3:53667457-53667476 None:intergenic 20.0%
!! GCAAAATATAAAATAATCAG+AGG + chr2_3:53667639-53667658 None:intergenic 20.0%
!!! ATTATATTGAAGTGTTTTTG+TGG + chr2_3:53667752-53667771 None:intergenic 20.0%
!! TTTATCATATTCATAAACAG+AGG + chr2_3:53668055-53668074 None:intergenic 20.0%
!! TAAAAAACAAACAATTCGTT+TGG - chr2_3:53668183-53668202 Msa0299150:intron 20.0%
!! AAAAAACAAACAATTCGTTT+GGG - chr2_3:53668184-53668203 Msa0299150:intron 20.0%
!! CACCAATAATAGATAAATAA+AGG + chr2_3:53668278-53668297 None:intergenic 20.0%
!! TATTGTATTAAGCATGTTTA+AGG + chr2_3:53668360-53668379 None:intergenic 20.0%
!! CATATGTAATTATTAAAGGA+AGG + chr2_3:53668520-53668539 None:intergenic 20.0%
!! AGTGCATATGTAATTATTAA+AGG + chr2_3:53668524-53668543 None:intergenic 20.0%
!! TGAAATCGTGAATAAAAAAA+TGG - chr2_3:53668801-53668820 Msa0299150:intron 20.0%
!!! TACTAAAAGAAATTTTGTCA+TGG - chr2_3:53668975-53668994 Msa0299150:intron 20.0%
!!! AGCATTTTCGTTAAAATTTT+AGG - chr2_3:53669096-53669115 Msa0299150:intron 20.0%
!! TATACTAGTACATGATATTA+TGG - chr2_3:53669134-53669153 Msa0299150:intron 20.0%
!! ATTTATATTAATTGTGCAGA+TGG - chr2_3:53669177-53669196 Msa0299150:intron 20.0%
!!! CTTTATAAGAGTCTTTTTTA+TGG + chr2_3:53669267-53669286 None:intergenic 20.0%
!!! ATTTTTTGAATTTGAGTCTT+TGG + chr2_3:53669324-53669343 None:intergenic 20.0%
!! AGTAATATAGAATCTTCATT+TGG + chr2_3:53669611-53669630 None:intergenic 20.0%
!! AATGATGTTATATTATCTAC+GGG + chr2_3:53669732-53669751 None:intergenic 20.0%
!!! TGTTGTACTTTGAAATAAAA+TGG - chr2_3:53669794-53669813 Msa0299150:five_prime_UTR 20.0%
! AATTTGTGTGACATATAGAT+TGG - chr2_3:53667011-53667030 Msa0299150:CDS 25.0%
! ATTTGTGTGACATATAGATT+GGG - chr2_3:53667012-53667031 Msa0299150:CDS 25.0%
!!! TTTTAGTTTTTGTGCTATCT+TGG - chr2_3:53667039-53667058 Msa0299150:CDS 25.0%
! CATCAAACTTCATGAAAAAT+TGG - chr2_3:53667199-53667218 Msa0299150:CDS 25.0%
! TTCATGAAAAATTGGGTAAT+AGG - chr2_3:53667207-53667226 Msa0299150:CDS 25.0%
! TTATCTATCCATTAAGTGTA+CGG + chr2_3:53667417-53667436 None:intergenic 25.0%
! AGAAGATTGCTATATATGAT+AGG + chr2_3:53667554-53667573 None:intergenic 25.0%
!!! GATTTTAAGAAAAGAAAACG+AGG + chr2_3:53667578-53667597 None:intergenic 25.0%
! AACTCAAGAGTTACAAATAA+CGG - chr2_3:53667847-53667866 Msa0299150:intron 25.0%
! AATTATCCTTCATTATTCTC+GGG + chr2_3:53667952-53667971 None:intergenic 25.0%
! GAATTATCCTTCATTATTCT+CGG + chr2_3:53667953-53667972 None:intergenic 25.0%
! AATTTCACATGTATAAAGAC+TGG + chr2_3:53668103-53668122 None:intergenic 25.0%
! GTAATTCAAACATTTCATAG+AGG + chr2_3:53668494-53668513 None:intergenic 25.0%
!!! TATAAGAGTCTTTTTTATGG+TGG + chr2_3:53669264-53669283 None:intergenic 25.0%
! AACATTTCTCCAAGTTTATT+GGG + chr2_3:53669365-53669384 None:intergenic 25.0%
! TAACATTTCTCCAAGTTTAT+TGG + chr2_3:53669366-53669385 None:intergenic 25.0%
! ATGAGCTGTCTATTATAAAT+GGG + chr2_3:53669580-53669599 None:intergenic 25.0%
! TATGAGCTGTCTATTATAAA+TGG + chr2_3:53669581-53669600 None:intergenic 25.0%
! ATATAGAATCTTCATTTGGA+GGG + chr2_3:53669607-53669626 None:intergenic 25.0%
! AATATAGAATCTTCATTTGG+AGG + chr2_3:53669608-53669627 None:intergenic 25.0%
! AATAAATCGTTACTGTAATG+TGG - chr2_3:53669684-53669703 Msa0299150:CDS 25.0%
! ATAAATCGTTACTGTAATGT+GGG - chr2_3:53669685-53669704 Msa0299150:CDS 25.0%
TACTAAGAATTGGTAGAAGT+AGG - chr2_3:53666799-53666818 Msa0299150:three_prime_UTR 30.0%
!! TCCATTTTTGTCACAATAAG+GGG + chr2_3:53666866-53666885 None:intergenic 30.0%
!! GTCCATTTTTGTCACAATAA+GGG + chr2_3:53666867-53666886 None:intergenic 30.0%
!! AGTCCATTTTTGTCACAATA+AGG + chr2_3:53666868-53666887 None:intergenic 30.0%
!! ATTGTGACAAAAATGGACTA+AGG - chr2_3:53666869-53666888 Msa0299150:exon 30.0%
AGTTGATTGCTTATGTAACT+AGG - chr2_3:53666923-53666942 Msa0299150:CDS 30.0%
ATTGCTTATGTAACTAGGTA+TGG - chr2_3:53666928-53666947 Msa0299150:CDS 30.0%
AGACATTCGATTGATATGAT+AGG + chr2_3:53667270-53667289 None:intergenic 30.0%
AGAGGATATGGATATAACTT+AGG - chr2_3:53667308-53667327 Msa0299150:CDS 30.0%
TATCTATCCATTAAGTGTAC+GGG + chr2_3:53667416-53667435 None:intergenic 30.0%
ATAAAATAATCAGAGGGTTC+CGG + chr2_3:53667632-53667651 None:intergenic 30.0%
TAAAGTTTGAACCCTATGTT+AGG - chr2_3:53667687-53667706 Msa0299150:intron 30.0%
! TTTTGTGGATGTAAGGAAAA+GGG + chr2_3:53667737-53667756 None:intergenic 30.0%
! TTTTTGTGGATGTAAGGAAA+AGG + chr2_3:53667738-53667757 None:intergenic 30.0%
! CATTGTAATGTTACTTGAGA+TGG + chr2_3:53667782-53667801 None:intergenic 30.0%
TCAAAACTCTCTCTATTTGA+AGG - chr2_3:53668017-53668036 Msa0299150:intron 30.0%
! TACATGTGAAATTTTCCTAG+TGG - chr2_3:53668110-53668129 Msa0299150:intron 30.0%
! CAAACATATATTTTGCCACT+AGG + chr2_3:53668128-53668147 None:intergenic 30.0%
!! AAAGAGTATGTTCTAAGATG+TGG + chr2_3:53668152-53668171 None:intergenic 30.0%
! TATCTATTATTGGTGCTTGT+TGG - chr2_3:53668283-53668302 Msa0299150:intron 30.0%
TGTAGACTTTAACATAAGAG+GGG + chr2_3:53668435-53668454 None:intergenic 30.0%
CTGTAGACTTTAACATAAGA+GGG + chr2_3:53668436-53668455 None:intergenic 30.0%
ACTGTAGACTTTAACATAAG+AGG + chr2_3:53668437-53668456 None:intergenic 30.0%
ATTCAAACATTTCATAGAGG+AGG + chr2_3:53668491-53668510 None:intergenic 30.0%
ATTCTTAAACAATGCCCTTA+GGG + chr2_3:53668953-53668972 None:intergenic 30.0%
AATTCTTAAACAATGCCCTT+AGG + chr2_3:53668954-53668973 None:intergenic 30.0%
ATGATTTCTGCAAATTTACC+AGG - chr2_3:53669203-53669222 Msa0299150:intron 30.0%
TGATTTCTGCAAATTTACCA+GGG - chr2_3:53669204-53669223 Msa0299150:intron 30.0%
ATAACGAGATAAAGAACTAC+TGG - chr2_3:53669234-53669253 Msa0299150:intron 30.0%
TTCAAAAAATCACCCTACAA+TGG - chr2_3:53669334-53669353 Msa0299150:intron 30.0%
! TATTGGGTTTTTCCATTGTA+GGG + chr2_3:53669349-53669368 None:intergenic 30.0%
! TTATTGGGTTTTTCCATTGT+AGG + chr2_3:53669350-53669369 None:intergenic 30.0%
ATGGAAAAACCCAATAAACT+TGG - chr2_3:53669353-53669372 Msa0299150:intron 30.0%
TCAAAGTCATCAAAAAGAGA+AGG + chr2_3:53669503-53669522 None:intergenic 30.0%
!! CAGTAACGATTTATTTTCCA+TGG + chr2_3:53669679-53669698 None:intergenic 30.0%
TAAATCGTTACTGTAATGTG+GGG - chr2_3:53669686-53669705 Msa0299150:CDS 30.0%
CAATTCTTAGTATGAGTGTG+TGG + chr2_3:53666791-53666810 None:intergenic 35.0%
CACACACTCATACTAAGAAT+TGG - chr2_3:53666789-53666808 Msa0299150:three_prime_UTR 35.0%
GTTCTCACCATATTCTCTAT+AGG + chr2_3:53666844-53666863 None:intergenic 35.0%
ACCCCTTATTGTGACAAAAA+TGG - chr2_3:53666862-53666881 Msa0299150:exon 35.0%
!! GACAAAAATGGACTAAGGAA+AGG - chr2_3:53666874-53666893 Msa0299150:exon 35.0%
! ATCAACTTTTTGTCTTCCTC+AGG + chr2_3:53666910-53666929 None:intergenic 35.0%
!! TCACAAGAGATTTTGTTTGC+AGG - chr2_3:53667077-53667096 Msa0299150:CDS 35.0%
!! TTTTGTTTGCAGGTCTTGAA+AGG - chr2_3:53667087-53667106 Msa0299150:CDS 35.0%
TAAGGTGGTTGAACTATCTA+AGG - chr2_3:53667129-53667148 Msa0299150:CDS 35.0%
TAAGGCCAGATATCAAAAGA+GGG - chr2_3:53667147-53667166 Msa0299150:CDS 35.0%
! AAGTTCCCTCTTTTGATATC+TGG + chr2_3:53667155-53667174 None:intergenic 35.0%
TCCATATCCTCTCTTGATTT+CGG + chr2_3:53667300-53667319 None:intergenic 35.0%
ATTTACACCCGTACACTTAA+TGG - chr2_3:53667406-53667425 Msa0299150:intron 35.0%
! AGTGTCTACGTTTTTACATC+CGG - chr2_3:53667610-53667629 Msa0299150:intron 35.0%
!! GAAGTGTTTTTGTGGATGTA+AGG + chr2_3:53667744-53667763 None:intergenic 35.0%
! TCTAGAGTGGTACACAATTT+CGG + chr2_3:53667820-53667839 None:intergenic 35.0%
! TGAGTTAGAGTATTCTAGAG+TGG + chr2_3:53667833-53667852 None:intergenic 35.0%
TTTATGACATCACCTGAGAT+TGG - chr2_3:53667980-53667999 Msa0299150:intron 35.0%
ATGTGAAATATGCCAATCTC+AGG + chr2_3:53667995-53668014 None:intergenic 35.0%
TCACATGTATAAAGACTGGT+GGG + chr2_3:53668099-53668118 None:intergenic 35.0%
TTCACATGTATAAAGACTGG+TGG + chr2_3:53668100-53668119 None:intergenic 35.0%
! ACAAACAATTCGTTTGGGAT+TGG - chr2_3:53668189-53668208 Msa0299150:intron 35.0%
! CAAACAATTCGTTTGGGATT+GGG - chr2_3:53668190-53668209 Msa0299150:intron 35.0%
! AAACAATTCGTTTGGGATTG+GGG - chr2_3:53668191-53668210 Msa0299150:intron 35.0%
!! TTTTGATAACAAGTGCCCTA+AGG - chr2_3:53668935-53668954 Msa0299150:intron 35.0%
! TTTGATAACAAGTGCCCTAA+GGG - chr2_3:53668936-53668955 Msa0299150:intron 35.0%
AATAAGTCAAACGCTAAACG+TGG - chr2_3:53669287-53669306 Msa0299150:intron 35.0%
!! ATATGGTGGACTCGTAATAT+TGG + chr2_3:53669405-53669424 None:intergenic 35.0%
CTTGTAGATGGTTGTGAATA+TGG + chr2_3:53669422-53669441 None:intergenic 35.0%
ATCCTCTTGCATAGCATTAA+TGG - chr2_3:53669445-53669464 Msa0299150:CDS 35.0%
ATCCATTAATGCTATGCAAG+AGG + chr2_3:53669450-53669469 None:intergenic 35.0%
! TGACTTTGACCTTCCTTTTA+TGG - chr2_3:53669514-53669533 Msa0299150:intron 35.0%
TGTATGCATCCATAAAAGGA+AGG + chr2_3:53669526-53669545 None:intergenic 35.0%
! TCCTTTTATGGATGCATACA+TGG - chr2_3:53669526-53669545 Msa0299150:intron 35.0%
TCCATGTATGCATCCATAAA+AGG + chr2_3:53669530-53669549 None:intergenic 35.0%
AGACTGTGAGTGAAAATTTC+TGG - chr2_3:53669549-53669568 Msa0299150:intron 35.0%
AAATCGTTACTGTAATGTGG+GGG - chr2_3:53669687-53669706 Msa0299150:CDS 35.0%
CATATTCTCTATAGGCTCGT+TGG + chr2_3:53666836-53666855 None:intergenic 40.0%
CAACGAGCCTATAGAGAATA+TGG - chr2_3:53666834-53666853 Msa0299150:three_prime_UTR 40.0%
ATGTAACTAGGTATGGCTGT+TGG - chr2_3:53666935-53666954 Msa0299150:CDS 40.0%
CGACAACTACCTAAATTTGC+AGG - chr2_3:53666964-53666983 Msa0299150:CDS 40.0%
CTAAGGCCAGATATCAAAAG+AGG - chr2_3:53667146-53667165 Msa0299150:CDS 40.0%
TCTTTGACCGAAATCAAGAG+AGG - chr2_3:53667290-53667309 Msa0299150:CDS 40.0%
ACCGAAATCAAGAGAGGATA+TGG - chr2_3:53667296-53667315 Msa0299150:CDS 40.0%
TGATAGGCAAGCAATGAGAA+GGG + chr2_3:53667538-53667557 None:intergenic 40.0%
ATGATAGGCAAGCAATGAGA+AGG + chr2_3:53667539-53667558 None:intergenic 40.0%
TTAGAGTTCTCGAGCTTCTT+GGG + chr2_3:53667670-53667689 None:intergenic 40.0%
! TTTAGAGTTCTCGAGCTTCT+TGG + chr2_3:53667671-53667690 None:intergenic 40.0%
GGAGTCATGATCCTAACATA+GGG + chr2_3:53667701-53667720 None:intergenic 40.0%
TTATTCTCGGGTGATCATGT+GGG + chr2_3:53667940-53667959 None:intergenic 40.0%
ATTATTCTCGGGTGATCATG+TGG + chr2_3:53667941-53667960 None:intergenic 40.0%
TGATCACCCGAGAATAATGA+AGG - chr2_3:53667943-53667962 Msa0299150:intron 40.0%
ACTCTCTCTATTTGAAGGAG+AGG - chr2_3:53668022-53668041 Msa0299150:intron 40.0%
CTCTCTCTATTTGAAGGAGA+GGG - chr2_3:53668023-53668042 Msa0299150:intron 40.0%
! AACAATTCGTTTGGGATTGG+GGG - chr2_3:53668192-53668211 Msa0299150:intron 40.0%
TTGTTTGATCCTAGGAGCAA+GGG - chr2_3:53668217-53668236 Msa0299150:intron 40.0%
GTAGATGGTTGTGAATATGG+TGG + chr2_3:53669419-53669438 None:intergenic 40.0%
CAAAGTTCTGCATCGTATAC+AGG + chr2_3:53669653-53669672 None:intergenic 40.0%
CTGTATACGATGCAGAACTT+TGG - chr2_3:53669651-53669670 Msa0299150:CDS 40.0%
! ATGGACTAAGGAAAGGCACA+TGG - chr2_3:53666881-53666900 Msa0299150:CDS 45.0%
CTAGGTATGGCTGTTGGAAT+TGG - chr2_3:53666941-53666960 Msa0299150:CDS 45.0%
TTTGCAGGTCTTGAAAGGTG+TGG - chr2_3:53667092-53667111 Msa0299150:CDS 45.0%
! TTGCAGGTCTTGAAAGGTGT+GGG - chr2_3:53667093-53667112 Msa0299150:CDS 45.0%
GTGGGAAGAGTTGTAGACTA+AGG - chr2_3:53667111-53667130 Msa0299150:CDS 45.0%
GGAAGAGTTGTAGACTAAGG+TGG - chr2_3:53667114-53667133 Msa0299150:CDS 45.0%
TCTCGAGCTTCTTGGGTTAA+TGG + chr2_3:53667663-53667682 None:intergenic 45.0%
CGGAGTCATGATCCTAACAT+AGG + chr2_3:53667702-53667721 None:intergenic 45.0%
!! GAAAAGGGTGTCGACAATTG+CGG + chr2_3:53667722-53667741 None:intergenic 45.0%
ATGATCACCCACACCTCTAT+AGG - chr2_3:53667892-53667911 Msa0299150:intron 45.0%
! ACCATGTCCTATAGAGGTGT+GGG + chr2_3:53667902-53667921 None:intergenic 45.0%
AACCATGTCCTATAGAGGTG+TGG + chr2_3:53667903-53667922 None:intergenic 45.0%
ACACCTCTATAGGACATGGT+TGG - chr2_3:53667902-53667921 Msa0299150:intron 45.0%
TCTCCAACCATGTCCTATAG+AGG + chr2_3:53667908-53667927 None:intergenic 45.0%
TATTCTCGGGTGATCATGTG+GGG + chr2_3:53667939-53667958 None:intergenic 45.0%
! CTATTTGAAGGAGAGGGTAC+TGG - chr2_3:53668029-53668048 Msa0299150:intron 45.0%
CTTGTTTGATCCTAGGAGCA+AGG - chr2_3:53668216-53668235 Msa0299150:intron 45.0%
TGTTTGATCCTAGGAGCAAG+GGG - chr2_3:53668218-53668237 Msa0299150:intron 45.0%
ATCTCGTTATCTGTTCTCCC+TGG + chr2_3:53669224-53669243 None:intergenic 45.0%
CAAGAGGATGCACTTGTAGA+TGG + chr2_3:53669434-53669453 None:intergenic 45.0%
ACCCACACCTCTATAGGACA+TGG - chr2_3:53667898-53667917 Msa0299150:intron 50.0%
!! TGGGGGTCTTGTTTGATCCT+AGG - chr2_3:53668209-53668228 Msa0299150:intron 50.0%
!! GATGCAGAACTTTGGAGCCA+TGG - chr2_3:53669659-53669678 Msa0299150:CDS 50.0%
! GAAAGGCACATGGACACCTG+AGG - chr2_3:53666891-53666910 Msa0299150:CDS 55.0%
TTGATCCTAGGAGCAAGGGG+TGG - chr2_3:53668221-53668240 Msa0299150:intron 55.0%
TGATCCTAGGAGCAAGGGGT+GGG - chr2_3:53668222-53668241 Msa0299150:intron 55.0%
GGGTGGGTGTCTTGTGGTAT+TGG - chr2_3:53668238-53668257 Msa0299150:intron 55.0%
CGGGTGATCATGTGGGGTTG+AGG + chr2_3:53667933-53667952 None:intergenic 60.0%
AGCAAGGGGTGGGTGTCTTG+TGG - chr2_3:53668232-53668251 Msa0299150:intron 60.0%
GACACCCACCCCTTGCTCCT+AGG + chr2_3:53668229-53668248 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 53666705 53669861 53666705 ID=Msa0299150;Name=Msa0299150
chr2_3 mRNA 53666705 53669861 53666705 ID=Msa0299150-mRNA-1;Parent=Msa0299150;Name=Msa0299150-mRNA-1;_AED=0.34;_eAED=0.34;_QI=148|0.5|0.66|1|1|1|3|173|219
chr2_3 exon 53666705 53667370 53666705 ID=Msa0299150-mRNA-1:exon:17209;Parent=Msa0299150-mRNA-1
chr2_3 exon 53669434 53669467 53669434 ID=Msa0299150-mRNA-1:exon:17208;Parent=Msa0299150-mRNA-1
chr2_3 exon 53669581 53669861 53669581 ID=Msa0299150-mRNA-1:exon:17207;Parent=Msa0299150-mRNA-1
chr2_3 five_prime_UTR 53669714 53669861 53669714 ID=Msa0299150-mRNA-1:five_prime_utr;Parent=Msa0299150-mRNA-1
chr2_3 CDS 53669581 53669713 53669581 ID=Msa0299150-mRNA-1:cds;Parent=Msa0299150-mRNA-1
chr2_3 CDS 53669434 53669467 53669434 ID=Msa0299150-mRNA-1:cds;Parent=Msa0299150-mRNA-1
chr2_3 CDS 53666878 53667370 53666878 ID=Msa0299150-mRNA-1:cds;Parent=Msa0299150-mRNA-1
chr2_3 three_prime_UTR 53666705 53666877 53666705 ID=Msa0299150-mRNA-1:three_prime_utr;Parent=Msa0299150-mRNA-1
Gene Sequence

>Msa0299150

ATGGTGAGAACCCCTTATTGTGACAAAAATGGACTAAGGAAAGGCACATGGACACCTGAGGAAGACAAAAAGTTGATTGCTTATGTAACTAGGTATGGCTGTTGGAATTGGCGACAACTACCTAAATTTGCAGGTCTTGAAAGGTGTGGGAAGAGTTGTAGACTAAGATGGACTATGATTTCTGCAAATTTACCAGGGAGAACAGATAACGAGATAAAGAACTACTGGCACACCACCATAAAAAAGACTCTTATAAAGAATAAGTCAAACGCTAAACGTGGAATGAAAAAAGCCAAAGACTCAAATTCAAAAAATCACCCTACAATGGAAAAACCCAATAAACTTGGAGAAATGTTAGAGAACAACAGTGATTCCAATATTACGAGTCCACCATATTCACAACCATCTACAAGTGCATCCTCTTGCATAGCATTAATGGATACTGCAGCTACTACAATATCATATGAAAATCCTTCTCTTTTTGATGACTTTGACCTTCCTTTTATGGATGCATACATGGAGACTGTGAGTGAAAATTTCTGGACAGACCCATTTATAATAGACAGCTCATATGTCCCTCCAAATGAAGATTCTATATTACTTGAACATGAATACTTTAGTCCTGTATACGATGCAGAACTTTGGAGCCATGGAAAATAA
Protein sequence

>Msa0299150

MVRTPYCDKNGLRKGTWTPEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWTMISANLPGRTDNEIKNYWHTTIKKTLIKNKSNAKRGMKKAKDSNSKNHPTMEKPNKLGEMLENNSDSNITSPPYSQPSTSASSCIALMDTAATTISYENPSLFDDFDLPFMDAYMETVSENFWTDPFIIDSSYVPPNEDSILLEHEYFSPVYDAELWSHGK*