Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305900 | XP_003597836.2 | 93.002 | 443 | 8 | 3 | 1 | 420 | 1 | 443 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305900 | sp|Q4VA72|BRCC3_XENTR | 44.751 | 181 | 81 | 4 | 1 | 166 | 1 | 177 | 2.33e-45 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305900 | G7IMH2 | 93.002 | 443 | 8 | 3 | 1 | 420 | 1 | 443 | 0.0 | 834 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094910 | Msa0305900 | 0.827641 | 1.398598e-54 | -8.615850e-47 |
| Msa0260200 | Msa0305900 | 0.819386 | 1.193336e-52 | -8.615850e-47 |
| Msa0305900 | Msa0340820 | 0.832177 | 1.096702e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305900 | MtrunA17_Chr2g0332611 | 93.956 | 364 | 8 | 3 | 71 | 420 | 1 | 364 | 0.0 | 688 |
| Msa0305900 | MtrunA17_Chr2g0332601 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 4.71e-45 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305900 | AT1G80210.1 | 63.027 | 403 | 114 | 9 | 1 | 376 | 1 | 395 | 1.33e-171 | 486 |
| Msa0305900 | AT1G80210.2 | 64.000 | 375 | 102 | 8 | 1 | 348 | 1 | 369 | 1.98e-164 | 467 |
| Msa0305900 | AT3G06820.3 | 63.868 | 393 | 108 | 9 | 1 | 364 | 1 | 388 | 2.40e-160 | 457 |
| Msa0305900 | AT3G06820.2 | 63.868 | 393 | 108 | 9 | 1 | 364 | 1 | 388 | 2.40e-160 | 457 |
| Msa0305900 | AT3G06820.1 | 61.538 | 312 | 97 | 7 | 71 | 364 | 1 | 307 | 1.95e-116 | 343 |
Find 116 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTGATTCTGGGTTTAT+TGG | 0.115541 | 2_3:+63987671 | Msa0305900:CDS |
| CGATGCTCAGTGAAATATTT+TGG | 0.127476 | 2_3:+63990472 | Msa0305900:three_prime_UTR |
| ATGTATCAACTTCTTGATTC+TGG | 0.141321 | 2_3:+63987662 | Msa0305900:CDS |
| CTATTAATCTTTAACCTAAT+TGG | 0.182784 | 2_3:-63985163 | None:intergenic |
| CACTGAAACCGAAGAGATTA+TGG | 0.203215 | 2_3:+63985419 | Msa0305900:CDS |
| TTCTTGATTCTGGGTTTATT+GGG | 0.251629 | 2_3:+63987672 | Msa0305900:CDS |
| ACACCACACTTCGACTTATC+AGG | 0.275809 | 2_3:+63989568 | Msa0305900:CDS |
| ATTTGTTTAATTAGCCAATT+AGG | 0.275927 | 2_3:+63985149 | Msa0305900:five_prime_UTR |
| TTGTTCCTCCAAGAATAAAA+TGG | 0.292010 | 2_3:-63990540 | None:intergenic |
| AGCTATGCACCGCTCAAATA+TGG | 0.296293 | 2_3:+63988541 | Msa0305900:CDS |
| AAAATTAAATCAGGACTATA+CGG | 0.302565 | 2_3:+63990609 | Msa0305900:three_prime_UTR |
| GAGATTATGGGTCTTCTTCT+TGG | 0.309605 | 2_3:+63985432 | Msa0305900:CDS |
| GAATCACCAGTGTCCTGCTC+TGG | 0.330705 | 2_3:-63987991 | None:intergenic |
| TCTTGAAGTGCGTTGATTGC+AGG | 0.331174 | 2_3:-63989718 | None:intergenic |
| AGTTATCTCAATGACATTCA+TGG | 0.337538 | 2_3:+63990568 | Msa0305900:three_prime_UTR |
| GGAGTGTGACTGCATTGATA+TGG | 0.369051 | 2_3:+63985596 | Msa0305900:CDS |
| TGTATCAACTTCTTGATTCT+GGG | 0.370430 | 2_3:+63987663 | Msa0305900:CDS |
| GACTAAGAGAGAATGAAATT+CGG | 0.373072 | 2_3:+63989743 | Msa0305900:CDS |
| GAAGCAGCAGCCAACTGTTC+AGG | 0.373869 | 2_3:-63985673 | None:intergenic |
| TGAAAATGTCCGAAGAAGTT+TGG | 0.381529 | 2_3:+63985370 | Msa0305900:CDS |
| AATGCCGATGCCAACTATCT+AGG | 0.397041 | 2_3:+63988428 | Msa0305900:CDS |
| AGTTATGTCAAAATTAAATC+AGG | 0.397209 | 2_3:+63990600 | Msa0305900:three_prime_UTR |
| AGAGGGAGTGAAGCAAGTTT+AGG | 0.400423 | 2_3:+63990165 | Msa0305900:CDS |
| CGTCGATCAGACCTTGTTTG+AGG | 0.408498 | 2_3:-63985628 | None:intergenic |
| GAGTGAAGAAGCCAAGAGTC+TGG | 0.408537 | 2_3:+63990122 | Msa0305900:CDS |
| ACTGAAACCGAAGAGATTAT+GGG | 0.413726 | 2_3:+63985420 | Msa0305900:CDS |
| AGATGAACTTCCTCGATGTA+TGG | 0.414680 | 2_3:-63990229 | None:intergenic |
| ACTAAGAGAGAATGAAATTC+GGG | 0.428257 | 2_3:+63989744 | Msa0305900:CDS |
| TGATGAATCTATATGAATAA+TGG | 0.429530 | 2_3:-63987914 | None:intergenic |
| GAGAATTTAACAACAAGATC+TGG | 0.435278 | 2_3:+63987949 | Msa0305900:CDS |
| CACAGAATGACTGTTACAAC+TGG | 0.444669 | 2_3:+63986298 | Msa0305900:intron |
| GCATGTTAACCAAACTTCTT+CGG | 0.444704 | 2_3:-63985379 | None:intergenic |
| CCTGGTAGCCGGAGCAGAAA+AGG | 0.449380 | 2_3:+63990312 | Msa0305900:CDS |
| TCTTCTTCTTGGCGATATCC+AGG | 0.452533 | 2_3:+63985443 | Msa0305900:CDS |
| AACAAGATCTGGTTACTTCA+AGG | 0.457060 | 2_3:+63987960 | Msa0305900:CDS |
| TGCCTCCGCCTCCAGACTCT+TGG | 0.459710 | 2_3:-63990133 | None:intergenic |
| AGCCAAGAGTCTGGAGGCGG+AGG | 0.461420 | 2_3:+63990131 | Msa0305900:CDS |
| GGAAGAACAACGAGGGTGAT+AGG | 0.461704 | 2_3:+63986319 | Msa0305900:CDS |
| AAGAAGACCCATAATCTCTT+CGG | 0.464604 | 2_3:-63985427 | None:intergenic |
| TAAACTTGCTTCACTCCCTC+TGG | 0.474010 | 2_3:-63990163 | None:intergenic |
| TATGGGAGATGCAACTTGAC+GGG | 0.478253 | 2_3:-63990211 | None:intergenic |
| ATGCCGATGCCAACTATCTA+GGG | 0.486571 | 2_3:+63988429 | Msa0305900:CDS |
| TCTGCTTTCCATCAGATGAC+TGG | 0.487274 | 2_3:-63987846 | None:intergenic |
| GAGTGTGACTGCATTGATAT+GGG | 0.495477 | 2_3:+63985597 | Msa0305900:CDS |
| GGTTGAAGAAGGAGGCGAGA+GGG | 0.499327 | 2_3:+63985236 | Msa0305900:five_prime_UTR |
| CATACTTTCTGACATATCCA+TGG | 0.509731 | 2_3:-63988513 | None:intergenic |
| CAGAGTTCAAGTGAATCTCT+TGG | 0.511986 | 2_3:+63990270 | Msa0305900:CDS |
| GTTAAATTCTCTGAGGAACT+TGG | 0.513339 | 2_3:-63987937 | None:intergenic |
| ATTGCTTTCCAGTCATCTGA+TGG | 0.523557 | 2_3:+63987838 | Msa0305900:CDS |
| CTCTGCGAGTTTCTTTGACG+AGG | 0.523918 | 2_3:-63990252 | None:intergenic |
| AATCACCAGTGTCCTGCTCT+GGG | 0.524238 | 2_3:-63987990 | None:intergenic |
| CATAATCTCTTCGGTTTCAG+TGG | 0.524734 | 2_3:-63985418 | None:intergenic |
| TTTACAGGAGACAGAGGTAT+GGG | 0.525737 | 2_3:-63987883 | None:intergenic |
| GATGAACTTCCTCGATGTAT+GGG | 0.533300 | 2_3:-63990228 | None:intergenic |
| TAGACAGTTGAGGTTGAAGA+AGG | 0.533784 | 2_3:+63985225 | Msa0305900:five_prime_UTR |
| ATGATGATAGCGGCGAATCA+AGG | 0.533813 | 2_3:-63989303 | None:intergenic |
| TAACAATGTTGAATTCTCGT+TGG | 0.537203 | 2_3:+63990336 | Msa0305900:exon |
| TACAATTGTGAGTGGTGACT+TGG | 0.540547 | 2_3:+63990517 | Msa0305900:three_prime_UTR |
| ATCTCAATGACATTCATGGT+TGG | 0.540600 | 2_3:+63990572 | Msa0305900:three_prime_UTR |
| GTATGGGAGATGCAACTTGA+CGG | 0.541009 | 2_3:-63990212 | None:intergenic |
| ACGGGGAGAAGCAACTAGAC+GGG | 0.542351 | 2_3:-63990193 | None:intergenic |
| TCAAAGAGTGTAGCTAGTCC+TGG | 0.543158 | 2_3:+63990294 | Msa0305900:CDS |
| CAAGGATGGCAGCACATGAA+GGG | 0.544109 | 2_3:-63989269 | None:intergenic |
| CAAGGGAGATAGCCCAGAGC+AGG | 0.545536 | 2_3:+63987978 | Msa0305900:CDS |
| ATTTACAGGAGACAGAGGTA+TGG | 0.546956 | 2_3:-63987884 | None:intergenic |
| TATCTAGGGAGCGTAAAAGA+TGG | 0.550604 | 2_3:+63988443 | Msa0305900:CDS |
| GAACAACGAGGGTGATAGGC+TGG | 0.559162 | 2_3:+63986323 | Msa0305900:CDS |
| GTGTAGCTAGTCCTGGTAGC+CGG | 0.559875 | 2_3:+63990301 | Msa0305900:CDS |
| TGGTGCAGAGTATATTAGAA+AGG | 0.560870 | 2_3:+63989240 | Msa0305900:CDS |
| ACAAGGATGGCAGCACATGA+AGG | 0.562454 | 2_3:-63989270 | None:intergenic |
| ACAAGATCTGGTTACTTCAA+GGG | 0.568314 | 2_3:+63987961 | Msa0305900:CDS |
| AAATTAAATCAGGACTATAC+GGG | 0.570034 | 2_3:+63990610 | Msa0305900:three_prime_UTR |
| ACTGGTGATTCGAGAAGTGC+TGG | 0.570423 | 2_3:+63988003 | Msa0305900:CDS |
| GACGGGGAGAAGCAACTAGA+CGG | 0.572216 | 2_3:-63990194 | None:intergenic |
| ACATACCGACATGTGAAGGC+AGG | 0.575866 | 2_3:-63986372 | None:intergenic |
| AGAAGCCAAGAGTCTGGAGG+CGG | 0.576842 | 2_3:+63990128 | Msa0305900:CDS |
| GCAACATGTACTATTTGAAG+AGG | 0.579067 | 2_3:+63989336 | Msa0305900:CDS |
| CAGTAATATGAGGATGTGAA+TGG | 0.584536 | 2_3:-63986348 | None:intergenic |
| GGATATGTCAGAAAGTATGC+AGG | 0.584919 | 2_3:+63988517 | Msa0305900:CDS |
| GAAGGCAGGACAGTAATATG+AGG | 0.590307 | 2_3:-63986358 | None:intergenic |
| ACAGTTGAGGTTGAAGAAGG+AGG | 0.602951 | 2_3:+63985228 | Msa0305900:five_prime_UTR |
| GATAGCCCAGAGCAGGACAC+TGG | 0.603898 | 2_3:+63987985 | Msa0305900:CDS |
| AGGTTGAAGAAGGAGGCGAG+AGG | 0.607767 | 2_3:+63985235 | Msa0305900:five_prime_UTR |
| AAGTACATACCGACATGTGA+AGG | 0.609102 | 2_3:-63986376 | None:intergenic |
| AAGCCATCTTACAAAATACA+AGG | 0.610913 | 2_3:+63989377 | Msa0305900:CDS |
| CATCGCAGTTGATGATCCCA+TGG | 0.612966 | 2_3:+63988496 | Msa0305900:CDS |
| ATGTACTATTTGAAGAGGAA+CGG | 0.613140 | 2_3:+63989341 | Msa0305900:CDS |
| TGTTTCTGACTAGACAGTTG+AGG | 0.614389 | 2_3:+63985215 | Msa0305900:five_prime_UTR |
| ATACTTTCTGACATATCCAT+GGG | 0.614506 | 2_3:-63988512 | None:intergenic |
| ACTGTCCTGCCTTCACATGT+CGG | 0.615521 | 2_3:+63986367 | Msa0305900:CDS |
| TTCGCCGCTATCATCATACA+AGG | 0.623157 | 2_3:+63989309 | Msa0305900:CDS |
| TTACAACGAAGATGCAAACA+AGG | 0.623673 | 2_3:+63987709 | Msa0305900:CDS |
| AAGGATGGCAGCACATGAAG+GGG | 0.623863 | 2_3:-63989268 | None:intergenic |
| GCGGAGGCATCTACGTCCAG+AGG | 0.627316 | 2_3:+63990147 | Msa0305900:CDS |
| GCTCCCTAGATAGTTGGCAT+CGG | 0.649706 | 2_3:-63988432 | None:intergenic |
| TCTTGTTGTTAAATTCTCTG+AGG | 0.649767 | 2_3:-63987944 | None:intergenic |
| GGGGTGCATCTCCTCAAACA+AGG | 0.651860 | 2_3:+63985617 | Msa0305900:CDS |
| CGGGGAGAAGCAACTAGACG+GGG | 0.653934 | 2_3:-63990192 | None:intergenic |
| ATCAAGGTTGATAAAAGACA+AGG | 0.656437 | 2_3:-63989287 | None:intergenic |
| CGGAGGCATCTACGTCCAGA+GGG | 0.659336 | 2_3:+63990148 | Msa0305900:CDS |
| AGTGTGACTGCATTGATATG+GGG | 0.661338 | 2_3:+63985598 | Msa0305900:CDS |
| ACCTCATGTCCATATTTGAG+CGG | 0.663052 | 2_3:-63988550 | None:intergenic |
| ATGGGAGATGCAACTTGACG+GGG | 0.663091 | 2_3:-63990210 | None:intergenic |
| CACCACTCACAATTGTACAC+AGG | 0.666140 | 2_3:-63990511 | None:intergenic |
| ACCGCTCAAATATGGACATG+AGG | 0.667262 | 2_3:+63988549 | Msa0305900:CDS |
| TGAAGAAGCCAAGAGTCTGG+AGG | 0.667597 | 2_3:+63990125 | Msa0305900:CDS |
| AAGCCTGATAAGTCGAAGTG+TGG | 0.672156 | 2_3:-63989571 | None:intergenic |
| GTGTGGTGTATGAAAGCGAG+TGG | 0.677265 | 2_3:-63989554 | None:intergenic |
| ATACTCAATCAACTTGCACA+AGG | 0.679543 | 2_3:-63989594 | None:intergenic |
| AGATCCTTGTATGATGATAG+CGG | 0.689342 | 2_3:-63989313 | None:intergenic |
| ACATAGAATGTACATGATAG+CGG | 0.690172 | 2_3:+63990415 | Msa0305900:three_prime_UTR |
| TACAACTGGAAGAACAACGA+GGG | 0.713101 | 2_3:+63986312 | Msa0305900:CDS |
| AGGTTGATAAAAGACAAGGA+TGG | 0.722279 | 2_3:-63989283 | None:intergenic |
| TACCTGTGTACAATTGTGAG+TGG | 0.729721 | 2_3:+63990509 | Msa0305900:three_prime_UTR |
| GTTGCATCTCCCATACATCG+AGG | 0.759729 | 2_3:+63990219 | Msa0305900:CDS |
| TTACAACTGGAAGAACAACG+AGG | 0.766921 | 2_3:+63986311 | Msa0305900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATAAGAAAAAATT+GGG | - | chr2_3:63985480-63985499 | None:intergenic | 10.0% |
| !! | TGAAAAAAATAAGAAAAAAT+TGG | - | chr2_3:63985481-63985500 | None:intergenic | 10.0% |
| !!! | AATAAAGAATTATTACTTTT+TGG | + | chr2_3:63989683-63989702 | Msa0305900:intron | 10.0% |
| !!! | TATTAAAATTTTCAACTTGA+TGG | - | chr2_3:63985124-63985143 | None:intergenic | 15.0% |
| !!! | AAAACTCATTTTTAATTCAA+TGG | + | chr2_3:63985756-63985775 | Msa0305900:intron | 15.0% |
| !!! | TTTAAATTGTAATTTTTCCT+AGG | + | chr2_3:63988369-63988388 | Msa0305900:intron | 15.0% |
| !!! | TTAAATTGTAATTTTTCCTA+GGG | + | chr2_3:63988370-63988389 | Msa0305900:intron | 15.0% |
| !!! | GTTTTAAAATAACACATATT+TGG | + | chr2_3:63989211-63989230 | Msa0305900:intron | 15.0% |
| !! | AAATAGGACTAATAAATAAA+CGG | - | chr2_3:63989643-63989662 | None:intergenic | 15.0% |
| !!! | TTTATTAGTCCTATTTTTAT+TGG | + | chr2_3:63989647-63989666 | Msa0305900:intron | 15.0% |
| !! | GTAAATAACAGTAAAAAAAT+TGG | - | chr2_3:63989890-63989909 | None:intergenic | 15.0% |
| !!! | AAGTTGAAAATTTTAATAGC+TGG | + | chr2_3:63985126-63985145 | Msa0305900:five_prime_UTR | 20.0% |
| !! | ATTTGTTTAATTAGCCAATT+AGG | + | chr2_3:63985149-63985168 | Msa0305900:five_prime_UTR | 20.0% |
| !! | CTATTAATCTTTAACCTAAT+TGG | - | chr2_3:63985166-63985185 | None:intergenic | 20.0% |
| !!! | AGAATGAGATTATCATTTTA+GGG | + | chr2_3:63985289-63985308 | Msa0305900:five_prime_UTR | 20.0% |
| !!! | ATTATCATTTTAGGGTTTTT+AGG | + | chr2_3:63985297-63985316 | Msa0305900:five_prime_UTR | 20.0% |
| !!! | TTATCATTTTAGGGTTTTTA+GGG | + | chr2_3:63985298-63985317 | Msa0305900:five_prime_UTR | 20.0% |
| !! | AACATTGTGAAATACAAATT+GGG | - | chr2_3:63985531-63985550 | None:intergenic | 20.0% |
| !! | ATAGACTATAAATAATAGGT+AGG | - | chr2_3:63986902-63986921 | None:intergenic | 20.0% |
| !! | GATGATAGACTATAAATAAT+AGG | - | chr2_3:63986906-63986925 | None:intergenic | 20.0% |
| !! | TGATGAATCTATATGAATAA+TGG | - | chr2_3:63987917-63987936 | None:intergenic | 20.0% |
| !! | AAATGCAATTATGATTATAC+TGG | - | chr2_3:63988291-63988310 | None:intergenic | 20.0% |
| !! | GTCAAACTTTGAATTATAAA+TGG | + | chr2_3:63989056-63989075 | Msa0305900:intron | 20.0% |
| !! | TTAAAATAACACATATTTGG+TGG | + | chr2_3:63989214-63989233 | Msa0305900:intron | 20.0% |
| !!! | CGTACATATATGAAATTTTA+TGG | + | chr2_3:63989432-63989451 | Msa0305900:intron | 20.0% |
| !!! | ATTTTATGGAAACACTATTT+TGG | + | chr2_3:63989446-63989465 | Msa0305900:intron | 20.0% |
| !!! | TTTTATGGAAACACTATTTT+GGG | + | chr2_3:63989447-63989466 | Msa0305900:intron | 20.0% |
| !! | AATAGGACTAATAAATAAAC+GGG | - | chr2_3:63989642-63989661 | None:intergenic | 20.0% |
| !! | AAGAACAAACCAATAAAAAT+AGG | - | chr2_3:63989659-63989678 | None:intergenic | 20.0% |
| !! | TTGGAAATAAAATTTCATAG+AGG | - | chr2_3:63989871-63989890 | None:intergenic | 20.0% |
| !!! | TTTTTACTGTTATTTACAGA+AGG | + | chr2_3:63989893-63989912 | Msa0305900:intron | 20.0% |
| !!! | TTAGTTCTGAATCTTAATTA+GGG | - | chr2_3:63989919-63989938 | None:intergenic | 20.0% |
| !! | AGTTATGTCAAAATTAAATC+AGG | + | chr2_3:63990600-63990619 | Msa0305900:three_prime_UTR | 20.0% |
| !! | AAAATTAAATCAGGACTATA+CGG | + | chr2_3:63990609-63990628 | Msa0305900:three_prime_UTR | 20.0% |
| !! | GAGAATGAGATTATCATTTT+AGG | + | chr2_3:63985288-63985307 | Msa0305900:five_prime_UTR | 25.0% |
| ! | ACATTGTGAAATACAAATTG+GGG | - | chr2_3:63985530-63985549 | None:intergenic | 25.0% |
| ! | CAACATTGTGAAATACAAAT+TGG | - | chr2_3:63985532-63985551 | None:intergenic | 25.0% |
| ! | AATAACACAGAACAAGAAAA+AGG | - | chr2_3:63985716-63985735 | None:intergenic | 25.0% |
| ! | ATTTCTAATTGAAACATGTG+TGG | - | chr2_3:63985918-63985937 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTAACCAAACA+GGG | - | chr2_3:63985968-63985987 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTAACCAAAC+AGG | - | chr2_3:63985969-63985988 | None:intergenic | 25.0% |
| ! | TGTATAACATAAAGGATGTT+AGG | - | chr2_3:63986594-63986613 | None:intergenic | 25.0% |
| ! | ATATGAATCAAATATGTTGC+TGG | + | chr2_3:63986728-63986747 | Msa0305900:intron | 25.0% |
| ! | ATAGATACTAGATCAAAATG+TGG | + | chr2_3:63986763-63986782 | Msa0305900:intron | 25.0% |
| ! | CTTGAATACATTGAATGTAA+TGG | - | chr2_3:63986818-63986837 | None:intergenic | 25.0% |
| !!! | GATTTACTTTGTTTTGGATA+GGG | - | chr2_3:63986867-63986886 | None:intergenic | 25.0% |
| !!! | AGATTTACTTTGTTTTGGAT+AGG | - | chr2_3:63986868-63986887 | None:intergenic | 25.0% |
| ! | GAAGTATAAATAGCAGATAT+AGG | - | chr2_3:63987242-63987261 | None:intergenic | 25.0% |
| !!! | TGCTATTTATACTTCACTTT+TGG | + | chr2_3:63987247-63987266 | Msa0305900:intron | 25.0% |
| !!! | TACTTCACTTTTGGTATTTA+AGG | + | chr2_3:63987256-63987275 | Msa0305900:intron | 25.0% |
| ! | TGTAAGACATAGAAAATGTA+TGG | + | chr2_3:63987299-63987318 | Msa0305900:intron | 25.0% |
| !!! | GTTCTATAAATTAGGTTGAA+AGG | + | chr2_3:63987376-63987395 | Msa0305900:intron | 25.0% |
| !! | TAATGATTATACTGTTGCTT+TGG | - | chr2_3:63987601-63987620 | None:intergenic | 25.0% |
| !! | TTTACTATTTTGTAGATGTG+CGG | + | chr2_3:63987630-63987649 | Msa0305900:intron | 25.0% |
| !!! | ATAATGGAGCTTTTATTTAC+AGG | - | chr2_3:63987901-63987920 | None:intergenic | 25.0% |
| ! | TCACTCACAAAAATATAGAT+TGG | - | chr2_3:63988153-63988172 | None:intergenic | 25.0% |
| ! | GAAATTCTTTCCTTTATACT+GGG | + | chr2_3:63988190-63988209 | Msa0305900:intron | 25.0% |
| ! | AACATCACTTTATCAACAAA+AGG | - | chr2_3:63988228-63988247 | None:intergenic | 25.0% |
| ! | ATAAAGTGATGTTGATCTTA+TGG | + | chr2_3:63988235-63988254 | Msa0305900:intron | 25.0% |
| !! | ATAATTGCATTTTTCTGTCT+AGG | + | chr2_3:63988299-63988318 | Msa0305900:intron | 25.0% |
| ! | ACTGAAATTAGGAAGATTAA+GGG | + | chr2_3:63988770-63988789 | Msa0305900:intron | 25.0% |
| ! | TTACAGTAAAATGGATATCA+GGG | - | chr2_3:63988801-63988820 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATGGATATC+AGG | - | chr2_3:63988802-63988821 | None:intergenic | 25.0% |
| ! | CATTACTGTTTACAGTAAAA+TGG | - | chr2_3:63988810-63988829 | None:intergenic | 25.0% |
| ! | ATAGGCATTTCATATATACT+TGG | - | chr2_3:63988950-63988969 | None:intergenic | 25.0% |
| ! | TTAGTGTACTATGTTATCAT+AGG | - | chr2_3:63988968-63988987 | None:intergenic | 25.0% |
| ! | GCATTAGAAATATAATCATG+CGG | + | chr2_3:63988993-63989012 | Msa0305900:intron | 25.0% |
| ! | CATTAGAAATATAATCATGC+GGG | + | chr2_3:63988994-63989013 | Msa0305900:intron | 25.0% |
| ! | ATTAGAAATATAATCATGCG+GGG | + | chr2_3:63988995-63989014 | Msa0305900:intron | 25.0% |
| ! | ATTGTATAATGATTGTTCAC+AGG | + | chr2_3:63989136-63989155 | Msa0305900:intron | 25.0% |
| !!! | TGTTATTTTAAAACCCAAGA+TGG | - | chr2_3:63989205-63989224 | None:intergenic | 25.0% |
| ! | ATAAAATTTCATAGAGGATC+AGG | - | chr2_3:63989865-63989884 | None:intergenic | 25.0% |
| !!! | GTTAGTTCTGAATCTTAATT+AGG | - | chr2_3:63989920-63989939 | None:intergenic | 25.0% |
| ! | ATTAAGATTCAGAACTAACT+TGG | + | chr2_3:63989921-63989940 | Msa0305900:intron | 25.0% |
| !! | ACAGAAATCTCAAATTTGTT+GGG | - | chr2_3:63990023-63990042 | None:intergenic | 25.0% |
| !! | TTTCAAACTAGCAAATTTTG+CGG | - | chr2_3:63990451-63990470 | None:intergenic | 25.0% |
| ! | GACATTTTCGCGAAAAAAAT+TGG | - | chr2_3:63985339-63985358 | None:intergenic | 30.0% |
| AATTGGGATTATACTATACC+TGG | - | chr2_3:63985464-63985483 | None:intergenic | 30.0% | |
| !! | ATTTTTCAGCATTCGAAGAA+TGG | + | chr2_3:63985574-63985593 | Msa0305900:intron | 30.0% |
| !! | TTTTTCAGCATTCGAAGAAT+GGG | + | chr2_3:63985575-63985594 | Msa0305900:intron | 30.0% |
| ATTGAATGTAATTACACCTG+CGG | + | chr2_3:63985872-63985891 | Msa0305900:intron | 30.0% | |
| AACCATTGCATTAAACACAT+GGG | - | chr2_3:63986186-63986205 | None:intergenic | 30.0% | |
| AAACCATTGCATTAAACACA+TGG | - | chr2_3:63986187-63986206 | None:intergenic | 30.0% | |
| AGAACAGCAACTATCAAAAT+TGG | - | chr2_3:63986226-63986245 | None:intergenic | 30.0% | |
| ! | TTGCTGTTCTTAGTGATTTA+AGG | + | chr2_3:63986236-63986255 | Msa0305900:intron | 30.0% |
| GAAGACAATATCGAAACAAT+GGG | - | chr2_3:63986417-63986436 | None:intergenic | 30.0% | |
| AGAAGACAATATCGAAACAA+TGG | - | chr2_3:63986418-63986437 | None:intergenic | 30.0% | |
| !!! | GTTTTTTAGTTGTTTGTGCT+TGG | + | chr2_3:63986457-63986476 | Msa0305900:intron | 30.0% |
| TCATAAATGCCATACACATT+AGG | - | chr2_3:63986498-63986517 | None:intergenic | 30.0% | |
| TGTTAGCATAGATTTGAGAA+AGG | + | chr2_3:63986560-63986579 | Msa0305900:intron | 30.0% | |
| CTACGAACTGTATAACATAA+AGG | - | chr2_3:63986602-63986621 | None:intergenic | 30.0% | |
| !! | GTCAACAGTATTTTTGTGTA+TGG | + | chr2_3:63986630-63986649 | Msa0305900:intron | 30.0% |
| !! | TCGACAGATTTACTTTGTTT+TGG | - | chr2_3:63986873-63986892 | None:intergenic | 30.0% |
| AGTCTTCGTATAATTTCTCA+TGG | - | chr2_3:63986997-63987016 | None:intergenic | 30.0% | |
| CTGTTTCAATGAAACAATAC+AGG | - | chr2_3:63987038-63987057 | None:intergenic | 30.0% | |
| ATAATTGTACATGCCATGTA+GGG | - | chr2_3:63987213-63987232 | None:intergenic | 30.0% | |
| !! | TCACTTTTGGTATTTAAGGT+AGG | + | chr2_3:63987260-63987279 | Msa0305900:intron | 30.0% |
| GCTAGAGAGTTCTATAAATT+AGG | + | chr2_3:63987368-63987387 | Msa0305900:intron | 30.0% | |
| CAGTACTCACTATTCATATA+CGG | + | chr2_3:63987428-63987447 | Msa0305900:intron | 30.0% | |
| TACGGATTCTAAACTTCTAA+TGG | + | chr2_3:63987446-63987465 | Msa0305900:intron | 30.0% | |
| ! | TGCTTTGGATAAAATCAAAC+AGG | - | chr2_3:63987586-63987605 | None:intergenic | 30.0% |
| ATGTATCAACTTCTTGATTC+TGG | + | chr2_3:63987662-63987681 | Msa0305900:CDS | 30.0% | |
| TGTATCAACTTCTTGATTCT+GGG | + | chr2_3:63987663-63987682 | Msa0305900:CDS | 30.0% | |
| TTCTTGATTCTGGGTTTATT+GGG | + | chr2_3:63987672-63987691 | Msa0305900:CDS | 30.0% | |
| !! | TCTTGTTGTTAAATTCTCTG+AGG | - | chr2_3:63987947-63987966 | None:intergenic | 30.0% |
| GAGAATTTAACAACAAGATC+TGG | + | chr2_3:63987949-63987968 | Msa0305900:CDS | 30.0% | |
| AACTGTTGTCTATTCTTCAT+GGG | - | chr2_3:63988074-63988093 | None:intergenic | 30.0% | |
| AAACTGTTGTCTATTCTTCA+TGG | - | chr2_3:63988075-63988094 | None:intergenic | 30.0% | |
| TTACATTTGAATGCAGAACA+TGG | + | chr2_3:63988107-63988126 | Msa0305900:intron | 30.0% | |
| AGTGAAGTTCTTAAAGATCA+GGG | + | chr2_3:63988168-63988187 | Msa0305900:intron | 30.0% | |
| GGAAATTCTTTCCTTTATAC+TGG | + | chr2_3:63988189-63988208 | Msa0305900:intron | 30.0% | |
| GCAATTATGATTATACTGGT+GGG | - | chr2_3:63988287-63988306 | None:intergenic | 30.0% | |
| TGCAATTATGATTATACTGG+TGG | - | chr2_3:63988288-63988307 | None:intergenic | 30.0% | |
| ! | AATTGTAATTTTTCCTAGGG+TGG | + | chr2_3:63988373-63988392 | Msa0305900:intron | 30.0% |
| ! | ATTGTAATTTTTCCTAGGGT+GGG | + | chr2_3:63988374-63988393 | Msa0305900:intron | 30.0% |
| ATACTTTCTGACATATCCAT+GGG | - | chr2_3:63988515-63988534 | None:intergenic | 30.0% | |
| TGTTTATCAACCGACAATTT+AGG | + | chr2_3:63988609-63988628 | Msa0305900:intron | 30.0% | |
| AAAAAACACGCCTAAATTGT+CGG | - | chr2_3:63988622-63988641 | None:intergenic | 30.0% | |
| TTCCTAATTTCAGTCTCTAA+TGG | - | chr2_3:63988764-63988783 | None:intergenic | 30.0% | |
| GACTGAAATTAGGAAGATTA+AGG | + | chr2_3:63988769-63988788 | Msa0305900:intron | 30.0% | |
| CTGAAATTAGGAAGATTAAG+GGG | + | chr2_3:63988771-63988790 | Msa0305900:intron | 30.0% | |
| TTAGAAATATAATCATGCGG+GGG | + | chr2_3:63988996-63989015 | Msa0305900:intron | 30.0% | |
| ! | ACCATGTCTAATCTTTTATG+AGG | + | chr2_3:63989162-63989181 | Msa0305900:intron | 30.0% |
| ACCTCATAAAAGATTAGACA+TGG | - | chr2_3:63989166-63989185 | None:intergenic | 30.0% | |
| !! | ATCAAGGTTGATAAAAGACA+AGG | - | chr2_3:63989290-63989309 | None:intergenic | 30.0% |
| ATGTACTATTTGAAGAGGAA+CGG | + | chr2_3:63989341-63989360 | Msa0305900:CDS | 30.0% | |
| AAGCCATCTTACAAAATACA+AGG | + | chr2_3:63989377-63989396 | Msa0305900:CDS | 30.0% | |
| AAAGTACAAACAAATGGCAT+AGG | - | chr2_3:63989514-63989533 | None:intergenic | 30.0% | |
| CCATTTGTTTGTACTTTGTA+GGG | + | chr2_3:63989517-63989536 | Msa0305900:intron | 30.0% | |
| GACTAAGAGAGAATGAAATT+CGG | + | chr2_3:63989743-63989762 | Msa0305900:CDS | 30.0% | |
| ACTAAGAGAGAATGAAATTC+GGG | + | chr2_3:63989744-63989763 | Msa0305900:CDS | 30.0% | |
| ! | AATAACTTGTGAGCATGTTT+AGG | - | chr2_3:63989994-63990013 | None:intergenic | 30.0% |
| GACAGAAATCTCAAATTTGT+TGG | - | chr2_3:63990024-63990043 | None:intergenic | 30.0% | |
| TAACAATGTTGAATTCTCGT+TGG | + | chr2_3:63990336-63990355 | Msa0305900:exon | 30.0% | |
| ACATAGAATGTACATGATAG+CGG | + | chr2_3:63990415-63990434 | Msa0305900:three_prime_UTR | 30.0% | |
| !!! | CAGTGAAATATTTTGGTTGT+TGG | + | chr2_3:63990479-63990498 | Msa0305900:three_prime_UTR | 30.0% |
| TTGTTCCTCCAAGAATAAAA+TGG | - | chr2_3:63990543-63990562 | None:intergenic | 30.0% | |
| AGTTATCTCAATGACATTCA+TGG | + | chr2_3:63990568-63990587 | Msa0305900:three_prime_UTR | 30.0% | |
| TGAAAATGTCCGAAGAAGTT+TGG | + | chr2_3:63985370-63985389 | Msa0305900:CDS | 35.0% | |
| GCATGTTAACCAAACTTCTT+CGG | - | chr2_3:63985382-63985401 | None:intergenic | 35.0% | |
| ACTGAAACCGAAGAGATTAT+GGG | + | chr2_3:63985420-63985439 | Msa0305900:CDS | 35.0% | |
| AAGAAGACCCATAATCTCTT+CGG | - | chr2_3:63985430-63985449 | None:intergenic | 35.0% | |
| TGAAACTAATCCTGAACAGT+TGG | + | chr2_3:63985663-63985682 | Msa0305900:intron | 35.0% | |
| TGCTTCATAAGTGATATGTG+AGG | - | chr2_3:63985794-63985813 | None:intergenic | 35.0% | |
| GAGAGCTTATGAAAATAAGC+TGG | + | chr2_3:63986079-63986098 | Msa0305900:intron | 35.0% | |
| ! | GCTTATTTGAGTTTACCTAC+CGG | - | chr2_3:63986150-63986169 | None:intergenic | 35.0% |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr2_3:63986160-63986179 | Msa0305900:intron | 35.0% | |
| CATTCTGTGCTATGAAGTTA+AGG | - | chr2_3:63986287-63986306 | None:intergenic | 35.0% | |
| CAGTAATATGAGGATGTGAA+TGG | - | chr2_3:63986351-63986370 | None:intergenic | 35.0% | |
| AATATCGAAACAATGGGAGA+CGG | - | chr2_3:63986411-63986430 | None:intergenic | 35.0% | |
| TTAGTTGTTTGTGCTTGGAT+TGG | + | chr2_3:63986462-63986481 | Msa0305900:intron | 35.0% | |
| GAACTGAATCCTAATGTGTA+TGG | + | chr2_3:63986486-63986505 | Msa0305900:intron | 35.0% | |
| CCTTCAATTGATGTTGAAGT+TGG | - | chr2_3:63986689-63986708 | None:intergenic | 35.0% | |
| CCAACTTCAACATCAATTGA+AGG | + | chr2_3:63986686-63986705 | Msa0305900:intron | 35.0% | |
| AATCAAATATGTTGCTGGAG+AGG | + | chr2_3:63986733-63986752 | Msa0305900:intron | 35.0% | |
| TTCAATGTATTCAAGCATCC+AGG | + | chr2_3:63986823-63986842 | Msa0305900:intron | 35.0% | |
| !!! | TTTGGATAGGGTTTTAGAGT+GGG | - | chr2_3:63986855-63986874 | None:intergenic | 35.0% |
| !!! | TTTTGGATAGGGTTTTAGAG+TGG | - | chr2_3:63986856-63986875 | None:intergenic | 35.0% |
| TCTAACTAACTCACAGACAA+AGG | + | chr2_3:63986934-63986953 | Msa0305900:intron | 35.0% | |
| CTAACTAACTCACAGACAAA+GGG | + | chr2_3:63986935-63986954 | Msa0305900:intron | 35.0% | |
| TAACTAACTCACAGACAAAG+GGG | + | chr2_3:63986936-63986955 | Msa0305900:intron | 35.0% | |
| ATTTGCATCAGCCAAATGAT+AGG | - | chr2_3:63986966-63986985 | None:intergenic | 35.0% | |
| GGGTATTATTCAGTGATTTG+TGG | - | chr2_3:63987145-63987164 | None:intergenic | 35.0% | |
| AAAGGTTACAGTAGAATGCA+GGG | - | chr2_3:63987165-63987184 | None:intergenic | 35.0% | |
| TCTACTGTAACCTTTCTGAA+TGG | + | chr2_3:63987170-63987189 | Msa0305900:intron | 35.0% | |
| !! | TCAAGTTGAACCATTCAGAA+AGG | - | chr2_3:63987183-63987202 | None:intergenic | 35.0% |
| GATAATTGTACATGCCATGT+AGG | - | chr2_3:63987214-63987233 | None:intergenic | 35.0% | |
| !! | ATCACAAACTTTTGAGGAAG+AGG | - | chr2_3:63987477-63987496 | None:intergenic | 35.0% |
| TTCCTCAAAAGTTTGTGATC+TGG | + | chr2_3:63987478-63987497 | Msa0305900:intron | 35.0% | |
| ! | AACCAGATCACAAACTTTTG+AGG | - | chr2_3:63987483-63987502 | None:intergenic | 35.0% |
| CTTCTTGATTCTGGGTTTAT+TGG | + | chr2_3:63987671-63987690 | Msa0305900:CDS | 35.0% | |
| TTACAACGAAGATGCAAACA+AGG | + | chr2_3:63987709-63987728 | Msa0305900:CDS | 35.0% | |
| ! | GCTTTGAACTGTATTCAGAT+AGG | + | chr2_3:63987802-63987821 | Msa0305900:intron | 35.0% |
| !! | CTTTTATTTACAGGAGACAG+AGG | - | chr2_3:63987892-63987911 | None:intergenic | 35.0% |
| ! | GTTAAATTCTCTGAGGAACT+TGG | - | chr2_3:63987940-63987959 | None:intergenic | 35.0% |
| AACAAGATCTGGTTACTTCA+AGG | + | chr2_3:63987960-63987979 | Msa0305900:CDS | 35.0% | |
| ACAAGATCTGGTTACTTCAA+GGG | + | chr2_3:63987961-63987980 | Msa0305900:CDS | 35.0% | |
| ACTGTTGTCTATTCTTCATG+GGG | - | chr2_3:63988073-63988092 | None:intergenic | 35.0% | |
| ATTTGAATGCAGAACATGGT+GGG | + | chr2_3:63988111-63988130 | Msa0305900:intron | 35.0% | |
| GAGTGAAGTTCTTAAAGATC+AGG | + | chr2_3:63988167-63988186 | Msa0305900:intron | 35.0% | |
| GCATACAAAACCCAGTATAA+AGG | - | chr2_3:63988203-63988222 | None:intergenic | 35.0% | |
| GATCTTATGGAAATGTGTTC+AGG | + | chr2_3:63988248-63988267 | Msa0305900:intron | 35.0% | |
| ! | TTGTAATTTTTCCTAGGGTG+GGG | + | chr2_3:63988375-63988394 | Msa0305900:intron | 35.0% |
| CATACTTTCTGACATATCCA+TGG | - | chr2_3:63988516-63988535 | None:intergenic | 35.0% | |
| !!! | GACAATTTAGGCGTGTTTTT+TGG | + | chr2_3:63988621-63988640 | Msa0305900:intron | 35.0% |
| !!! | TTAGGCGTGTTTTTTGGATT+TGG | + | chr2_3:63988627-63988646 | Msa0305900:intron | 35.0% |
| TAGTATATAAAGCTCAACCC+AGG | + | chr2_3:63988698-63988717 | Msa0305900:intron | 35.0% | |
| TGCCATTAGAGACTGAAATT+AGG | + | chr2_3:63988759-63988778 | Msa0305900:intron | 35.0% | |
| AAATTAGGAAGATTAAGGGG+AGG | + | chr2_3:63988774-63988793 | Msa0305900:intron | 35.0% | |
| AATTAGGAAGATTAAGGGGA+GGG | + | chr2_3:63988775-63988794 | Msa0305900:intron | 35.0% | |
| AAGGAAAGCTTCATAAGCAA+AGG | - | chr2_3:63988907-63988926 | None:intergenic | 35.0% | |
| TTTGCTTATGAAGCTTTCCT+TGG | + | chr2_3:63988906-63988925 | Msa0305900:intron | 35.0% | |
| ! | ATATATACTTGGTGGAACAG+TGG | - | chr2_3:63988939-63988958 | None:intergenic | 35.0% |
| GGCATTTCATATATACTTGG+TGG | - | chr2_3:63988947-63988966 | None:intergenic | 35.0% | |
| TAGAAATATAATCATGCGGG+GGG | + | chr2_3:63988997-63989016 | Msa0305900:intron | 35.0% | |
| ACAAGATAGTTTCTCCATCT+TGG | + | chr2_3:63989188-63989207 | Msa0305900:intron | 35.0% | |
| CAAGATAGTTTCTCCATCTT+GGG | + | chr2_3:63989189-63989208 | Msa0305900:intron | 35.0% | |
| TGGTGCAGAGTATATTAGAA+AGG | + | chr2_3:63989240-63989259 | Msa0305900:CDS | 35.0% | |
| !! | AGGTTGATAAAAGACAAGGA+TGG | - | chr2_3:63989286-63989305 | None:intergenic | 35.0% |
| AGATCCTTGTATGATGATAG+CGG | - | chr2_3:63989316-63989335 | None:intergenic | 35.0% | |
| GCAACATGTACTATTTGAAG+AGG | + | chr2_3:63989336-63989355 | Msa0305900:CDS | 35.0% | |
| ! | CCACCTTGTATTTTGTAAGA+TGG | - | chr2_3:63989383-63989402 | None:intergenic | 35.0% |
| CCATCTTACAAAATACAAGG+TGG | + | chr2_3:63989380-63989399 | Msa0305900:intron | 35.0% | |
| GCCATTTGTTTGTACTTTGT+AGG | + | chr2_3:63989516-63989535 | Msa0305900:intron | 35.0% | |
| CCCTACAAAGTACAAACAAA+TGG | - | chr2_3:63989520-63989539 | None:intergenic | 35.0% | |
| TTGTTTGTACTTTGTAGGGA+TGG | + | chr2_3:63989521-63989540 | Msa0305900:intron | 35.0% | |
| TGTTTGTACTTTGTAGGGAT+GGG | + | chr2_3:63989522-63989541 | Msa0305900:intron | 35.0% | |
| ATACTCAATCAACTTGCACA+AGG | - | chr2_3:63989597-63989616 | None:intergenic | 35.0% | |
| !! | TGTGCAAGTTGATTGAGTAT+TGG | + | chr2_3:63989597-63989616 | Msa0305900:intron | 35.0% |
| CTCTTAAGATACTGACAACA+TGG | - | chr2_3:63989815-63989834 | None:intergenic | 35.0% | |
| CATGTTGTCAGTATCTTAAG+AGG | + | chr2_3:63989813-63989832 | Msa0305900:intron | 35.0% | |
| TTGTCAGTATCTTAAGAGGT+TGG | + | chr2_3:63989817-63989836 | Msa0305900:intron | 35.0% | |
| ACATAGGACATGATAGAAGA+GGG | - | chr2_3:63989949-63989968 | None:intergenic | 35.0% | |
| TACATAGGACATGATAGAAG+AGG | - | chr2_3:63989950-63989969 | None:intergenic | 35.0% | |
| AAGTCAATAGACAGTGAAGA+TGG | - | chr2_3:63990074-63990093 | None:intergenic | 35.0% | |
| ! | ATTGTTATCCTTTTCTGCTC+CGG | - | chr2_3:63990323-63990342 | None:intergenic | 35.0% |
| ! | CGATGCTCAGTGAAATATTT+TGG | + | chr2_3:63990472-63990491 | Msa0305900:three_prime_UTR | 35.0% |
| !! | TGACTTGGCCATTTTATTCT+TGG | + | chr2_3:63990532-63990551 | Msa0305900:three_prime_UTR | 35.0% |
| ATCTCAATGACATTCATGGT+TGG | + | chr2_3:63990572-63990591 | Msa0305900:three_prime_UTR | 35.0% | |
| ! | TGTTTCTGACTAGACAGTTG+AGG | + | chr2_3:63985215-63985234 | Msa0305900:five_prime_UTR | 40.0% |
| TAGACAGTTGAGGTTGAAGA+AGG | + | chr2_3:63985225-63985244 | Msa0305900:five_prime_UTR | 40.0% | |
| CATAATCTCTTCGGTTTCAG+TGG | - | chr2_3:63985421-63985440 | None:intergenic | 40.0% | |
| CACTGAAACCGAAGAGATTA+TGG | + | chr2_3:63985419-63985438 | Msa0305900:CDS | 40.0% | |
| GAGATTATGGGTCTTCTTCT+TGG | + | chr2_3:63985432-63985451 | Msa0305900:CDS | 40.0% | |
| ! | GAGTGTGACTGCATTGATAT+GGG | + | chr2_3:63985597-63985616 | Msa0305900:CDS | 40.0% |
| ! | AGTGTGACTGCATTGATATG+GGG | + | chr2_3:63985598-63985617 | Msa0305900:CDS | 40.0% |
| TCACTTATGAAGCAGAGACA+CGG | + | chr2_3:63985800-63985819 | Msa0305900:intron | 40.0% | |
| TTCTGCAGAGCATATCACTT+AGG | + | chr2_3:63985942-63985961 | Msa0305900:intron | 40.0% | |
| ATTAAACACATGGGCCTGTT+TGG | - | chr2_3:63986177-63986196 | None:intergenic | 40.0% | |
| CACAGAATGACTGTTACAAC+TGG | + | chr2_3:63986298-63986317 | Msa0305900:intron | 40.0% | |
| TTACAACTGGAAGAACAACG+AGG | + | chr2_3:63986311-63986330 | Msa0305900:CDS | 40.0% | |
| TACAACTGGAAGAACAACGA+GGG | + | chr2_3:63986312-63986331 | Msa0305900:CDS | 40.0% | |
| AAGTACATACCGACATGTGA+AGG | - | chr2_3:63986379-63986398 | None:intergenic | 40.0% | |
| CACATGTCGGTATGTACTTT+CGG | + | chr2_3:63986380-63986399 | Msa0305900:intron | 40.0% | |
| ACATGTCGGTATGTACTTTC+GGG | + | chr2_3:63986381-63986400 | Msa0305900:intron | 40.0% | |
| ATATCGAAACAATGGGAGAC+GGG | - | chr2_3:63986410-63986429 | None:intergenic | 40.0% | |
| !!! | TTTTAGAGTGGGAGATAACC+TGG | - | chr2_3:63986844-63986863 | None:intergenic | 40.0% |
| AACTAACTCACAGACAAAGG+GGG | + | chr2_3:63986937-63986956 | Msa0305900:intron | 40.0% | |
| AAAGGGGGTTTCCTATCATT+TGG | + | chr2_3:63986952-63986971 | Msa0305900:intron | 40.0% | |
| GAAAGGTTACAGTAGAATGC+AGG | - | chr2_3:63987166-63987185 | None:intergenic | 40.0% | |
| !! | AGGTTGAAAGGCTTTTTAGC+AGG | + | chr2_3:63987388-63987407 | Msa0305900:intron | 40.0% |
| !! | TGCTTGTTATCACGTTGGAT+AGG | + | chr2_3:63987520-63987539 | Msa0305900:intron | 40.0% |
| AACGAAGATGCAAACAAGGT+TGG | + | chr2_3:63987713-63987732 | Msa0305900:intron | 40.0% | |
| ATTGCTTTCCAGTCATCTGA+TGG | + | chr2_3:63987838-63987857 | Msa0305900:CDS | 40.0% | |
| ! | TTTACAGGAGACAGAGGTAT+GGG | - | chr2_3:63987886-63987905 | None:intergenic | 40.0% |
| ATTTACAGGAGACAGAGGTA+TGG | - | chr2_3:63987887-63987906 | None:intergenic | 40.0% | |
| CATTTGAATGCAGAACATGG+TGG | + | chr2_3:63988110-63988129 | Msa0305900:intron | 40.0% | |
| ! | TGTAATTTTTCCTAGGGTGG+GGG | + | chr2_3:63988376-63988395 | Msa0305900:intron | 40.0% |
| ! | TTTTACGCTCCCTAGATAGT+TGG | - | chr2_3:63988441-63988460 | None:intergenic | 40.0% |
| ! | TATCTAGGGAGCGTAAAAGA+TGG | + | chr2_3:63988443-63988462 | Msa0305900:CDS | 40.0% |
| ! | GGATATGTCAGAAAGTATGC+AGG | + | chr2_3:63988517-63988536 | Msa0305900:CDS | 40.0% |
| ACCTCATGTCCATATTTGAG+CGG | - | chr2_3:63988553-63988572 | None:intergenic | 40.0% | |
| TGACCTGGTGATAAATGTCT+GGG | + | chr2_3:63988721-63988740 | Msa0305900:intron | 40.0% | |
| !! | TCATACTGAGGAGCATTCTA+GGG | - | chr2_3:63988876-63988895 | None:intergenic | 40.0% |
| !! | ATCATACTGAGGAGCATTCT+AGG | - | chr2_3:63988877-63988896 | None:intergenic | 40.0% |
| ! | TAACACATATTTGGTGGCAG+TGG | + | chr2_3:63989220-63989239 | Msa0305900:intron | 40.0% |
| ! | CTACATCTAAAGCGCTACAT+AGG | - | chr2_3:63989965-63989984 | None:intergenic | 40.0% |
| GATGAACTTCCTCGATGTAT+GGG | - | chr2_3:63990231-63990250 | None:intergenic | 40.0% | |
| AGATGAACTTCCTCGATGTA+TGG | - | chr2_3:63990232-63990251 | None:intergenic | 40.0% | |
| CAGAGTTCAAGTGAATCTCT+TGG | + | chr2_3:63990270-63990289 | Msa0305900:CDS | 40.0% | |
| ! | CAAACTAGCAAATTTTGCGG+AGG | - | chr2_3:63990448-63990467 | None:intergenic | 40.0% |
| TACCTGTGTACAATTGTGAG+TGG | + | chr2_3:63990509-63990528 | Msa0305900:three_prime_UTR | 40.0% | |
| TACAATTGTGAGTGGTGACT+TGG | + | chr2_3:63990517-63990536 | Msa0305900:three_prime_UTR | 40.0% | |
| !! | CTTGGCCATTTTATTCTTGG+AGG | + | chr2_3:63990535-63990554 | Msa0305900:three_prime_UTR | 40.0% |
| ACAGTTGAGGTTGAAGAAGG+AGG | + | chr2_3:63985228-63985247 | Msa0305900:five_prime_UTR | 45.0% | |
| TCTTCTTCTTGGCGATATCC+AGG | + | chr2_3:63985443-63985462 | Msa0305900:CDS | 45.0% | |
| ! | GGAGTGTGACTGCATTGATA+TGG | + | chr2_3:63985596-63985615 | Msa0305900:CDS | 45.0% |
| CACTTATGAAGCAGAGACAC+GGG | + | chr2_3:63985801-63985820 | Msa0305900:intron | 45.0% | |
| ACTTATGAAGCAGAGACACG+GGG | + | chr2_3:63985802-63985821 | Msa0305900:intron | 45.0% | |
| TGGCATGTTGACACAAGTAG+TGG | + | chr2_3:63985833-63985852 | Msa0305900:intron | 45.0% | |
| CATATCACTTAGGCCCTGTT+TGG | + | chr2_3:63985952-63985971 | Msa0305900:intron | 45.0% | |
| GTTCTCACAACTGCTTAAGC+CGG | + | chr2_3:63986128-63986147 | Msa0305900:intron | 45.0% | |
| GGCCCATGTGTTTAATGCAA+TGG | + | chr2_3:63986181-63986200 | Msa0305900:intron | 45.0% | |
| GAAGGCAGGACAGTAATATG+AGG | - | chr2_3:63986361-63986380 | None:intergenic | 45.0% | |
| !! | GATTTGTGGAGAAGTGTCTG+AGG | - | chr2_3:63987131-63987150 | None:intergenic | 45.0% |
| !! | CAGCATGCTTGTTATCACGT+TGG | + | chr2_3:63987515-63987534 | Msa0305900:intron | 45.0% |
| ! | TTTTGTAGATGTGCGGACTC+AGG | + | chr2_3:63987637-63987656 | Msa0305900:intron | 45.0% |
| TCTGCTTTCCATCAGATGAC+TGG | - | chr2_3:63987849-63987868 | None:intergenic | 45.0% | |
| GAAATGTGTTCAGGCCCTAA+AGG | + | chr2_3:63988257-63988276 | Msa0305900:intron | 45.0% | |
| TACTGGTGGGACATCCTTTA+GGG | - | chr2_3:63988274-63988293 | None:intergenic | 45.0% | |
| ATACTGGTGGGACATCCTTT+AGG | - | chr2_3:63988275-63988294 | None:intergenic | 45.0% | |
| ! | GTAATTTTTCCTAGGGTGGG+GGG | + | chr2_3:63988377-63988396 | Msa0305900:intron | 45.0% |
| AATGCCGATGCCAACTATCT+AGG | + | chr2_3:63988428-63988447 | Msa0305900:CDS | 45.0% | |
| ATGCCGATGCCAACTATCTA+GGG | + | chr2_3:63988429-63988448 | Msa0305900:CDS | 45.0% | |
| AGCTATGCACCGCTCAAATA+TGG | + | chr2_3:63988541-63988560 | Msa0305900:CDS | 45.0% | |
| ACCGCTCAAATATGGACATG+AGG | + | chr2_3:63988549-63988568 | Msa0305900:CDS | 45.0% | |
| ATCTTGTCCCCTTGCACAAA+AGG | + | chr2_3:63988654-63988673 | Msa0305900:intron | 45.0% | |
| TCTTGTCCCCTTGCACAAAA+GGG | + | chr2_3:63988655-63988674 | Msa0305900:intron | 45.0% | |
| CATTTATCACCAGGTCACCT+GGG | - | chr2_3:63988718-63988737 | None:intergenic | 45.0% | |
| ACATTTATCACCAGGTCACC+TGG | - | chr2_3:63988719-63988738 | None:intergenic | 45.0% | |
| GTGACCTGGTGATAAATGTC+TGG | + | chr2_3:63988720-63988739 | Msa0305900:intron | 45.0% | |
| CTACCCAGACATTTATCACC+AGG | - | chr2_3:63988727-63988746 | None:intergenic | 45.0% | |
| AAGGCAGCAGAATCATACTG+AGG | - | chr2_3:63988888-63988907 | None:intergenic | 45.0% | |
| AATATAATCATGCGGGGGGA+AGG | + | chr2_3:63989001-63989020 | Msa0305900:intron | 45.0% | |
| !! | ATGATGATAGCGGCGAATCA+AGG | - | chr2_3:63989306-63989325 | None:intergenic | 45.0% |
| TTCGCCGCTATCATCATACA+AGG | + | chr2_3:63989309-63989328 | Msa0305900:CDS | 45.0% | |
| ACACCACACTTCGACTTATC+AGG | + | chr2_3:63989568-63989587 | Msa0305900:CDS | 45.0% | |
| AAGCCTGATAAGTCGAAGTG+TGG | - | chr2_3:63989574-63989593 | None:intergenic | 45.0% | |
| !! | TCTTGAAGTGCGTTGATTGC+AGG | - | chr2_3:63989721-63989740 | None:intergenic | 45.0% |
| ! | TAAACTTGCTTCACTCCCTC+TGG | - | chr2_3:63990166-63990185 | None:intergenic | 45.0% |
| AGAGGGAGTGAAGCAAGTTT+AGG | + | chr2_3:63990165-63990184 | Msa0305900:CDS | 45.0% | |
| TATGGGAGATGCAACTTGAC+GGG | - | chr2_3:63990214-63990233 | None:intergenic | 45.0% | |
| GTATGGGAGATGCAACTTGA+CGG | - | chr2_3:63990215-63990234 | None:intergenic | 45.0% | |
| ! | TCAAAGAGTGTAGCTAGTCC+TGG | + | chr2_3:63990294-63990313 | Msa0305900:CDS | 45.0% |
| CACCACTCACAATTGTACAC+AGG | - | chr2_3:63990514-63990533 | None:intergenic | 45.0% | |
| ! | CGTCGATCAGACCTTGTTTG+AGG | - | chr2_3:63985631-63985650 | None:intergenic | 50.0% |
| TCACAACTGCTTAAGCCGGT+AGG | + | chr2_3:63986132-63986151 | Msa0305900:intron | 50.0% | |
| ACACATGGGCCTGTTTGGAT+TGG | - | chr2_3:63986172-63986191 | None:intergenic | 50.0% | |
| GGAAGAACAACGAGGGTGAT+AGG | + | chr2_3:63986319-63986338 | Msa0305900:CDS | 50.0% | |
| ACTGTCCTGCCTTCACATGT+CGG | + | chr2_3:63986367-63986386 | Msa0305900:CDS | 50.0% | |
| ACATACCGACATGTGAAGGC+AGG | - | chr2_3:63986375-63986394 | None:intergenic | 50.0% | |
| ACTTGAGCACATGCCCTACA+TGG | + | chr2_3:63987197-63987216 | Msa0305900:intron | 50.0% | |
| AATCACCAGTGTCCTGCTCT+GGG | - | chr2_3:63987993-63988012 | None:intergenic | 50.0% | |
| ! | ACTGGTGATTCGAGAAGTGC+TGG | + | chr2_3:63988003-63988022 | Msa0305900:CDS | 50.0% |
| !! | GAGAAGTGCTGGTGCTAGTA+AGG | + | chr2_3:63988014-63988033 | Msa0305900:intron | 50.0% |
| GTGGGGGGATCTTCAGAATT+GGG | + | chr2_3:63988392-63988411 | Msa0305900:intron | 50.0% | |
| TGGGGGGATCTTCAGAATTG+GGG | + | chr2_3:63988393-63988412 | Msa0305900:intron | 50.0% | |
| GCTCCCTAGATAGTTGGCAT+CGG | - | chr2_3:63988435-63988454 | None:intergenic | 50.0% | |
| !! | CATCGCAGTTGATGATCCCA+TGG | + | chr2_3:63988496-63988515 | Msa0305900:CDS | 50.0% |
| ! | TGTGCTCCCTTTTGTGCAAG+GGG | - | chr2_3:63988664-63988683 | None:intergenic | 50.0% |
| ! | CTGTGCTCCCTTTTGTGCAA+GGG | - | chr2_3:63988665-63988684 | None:intergenic | 50.0% |
| ! | ACTGTGCTCCCTTTTGTGCA+AGG | - | chr2_3:63988666-63988685 | None:intergenic | 50.0% |
| ! | TTGCACAAAAGGGAGCACAG+TGG | + | chr2_3:63988665-63988684 | Msa0305900:intron | 50.0% |
| AAGGATGGCAGCACATGAAG+GGG | - | chr2_3:63989271-63989290 | None:intergenic | 50.0% | |
| CAAGGATGGCAGCACATGAA+GGG | - | chr2_3:63989272-63989291 | None:intergenic | 50.0% | |
| ACAAGGATGGCAGCACATGA+AGG | - | chr2_3:63989273-63989292 | None:intergenic | 50.0% | |
| GTGTGGTGTATGAAAGCGAG+TGG | - | chr2_3:63989557-63989576 | None:intergenic | 50.0% | |
| GAGTGAAGAAGCCAAGAGTC+TGG | + | chr2_3:63990122-63990141 | Msa0305900:CDS | 50.0% | |
| TGAAGAAGCCAAGAGTCTGG+AGG | + | chr2_3:63990125-63990144 | Msa0305900:CDS | 50.0% | |
| ATGGGAGATGCAACTTGACG+GGG | - | chr2_3:63990213-63990232 | None:intergenic | 50.0% | |
| GTTGCATCTCCCATACATCG+AGG | + | chr2_3:63990219-63990238 | Msa0305900:CDS | 50.0% | |
| CTCTGCGAGTTTCTTTGACG+AGG | - | chr2_3:63990255-63990274 | None:intergenic | 50.0% | |
| AGGTTGAAGAAGGAGGCGAG+AGG | + | chr2_3:63985235-63985254 | Msa0305900:five_prime_UTR | 55.0% | |
| GGTTGAAGAAGGAGGCGAGA+GGG | + | chr2_3:63985236-63985255 | Msa0305900:five_prime_UTR | 55.0% | |
| GGGGTGCATCTCCTCAAACA+AGG | + | chr2_3:63985617-63985636 | Msa0305900:CDS | 55.0% | |
| GAAGCAGCAGCCAACTGTTC+AGG | - | chr2_3:63985676-63985695 | None:intergenic | 55.0% | |
| CAACACGTGTCTAACACCGC+AGG | - | chr2_3:63985891-63985910 | None:intergenic | 55.0% | |
| ! | CTGCGGTGTTAGACACGTGT+TGG | + | chr2_3:63985889-63985908 | Msa0305900:intron | 55.0% |
| GAACAACGAGGGTGATAGGC+TGG | + | chr2_3:63986323-63986342 | Msa0305900:CDS | 55.0% | |
| GAATCACCAGTGTCCTGCTC+TGG | - | chr2_3:63987994-63988013 | None:intergenic | 55.0% | |
| GGTGGGGGGATCTTCAGAAT+TGG | + | chr2_3:63988391-63988410 | Msa0305900:intron | 55.0% | |
| AAAGCTCAACCCAGGTGACC+TGG | + | chr2_3:63988706-63988725 | Msa0305900:intron | 55.0% | |
| GGAACAGTGGAACTGTGCCA+AGG | - | chr2_3:63988926-63988945 | None:intergenic | 55.0% | |
| AGAAGCCAAGAGTCTGGAGG+CGG | + | chr2_3:63990128-63990147 | Msa0305900:CDS | 55.0% | |
| ACGGGGAGAAGCAACTAGAC+GGG | - | chr2_3:63990196-63990215 | None:intergenic | 55.0% | |
| GACGGGGAGAAGCAACTAGA+CGG | - | chr2_3:63990197-63990216 | None:intergenic | 55.0% | |
| GTGTAGCTAGTCCTGGTAGC+CGG | + | chr2_3:63990301-63990320 | Msa0305900:CDS | 55.0% | |
| CAAGGGAGATAGCCCAGAGC+AGG | + | chr2_3:63987978-63987997 | Msa0305900:CDS | 60.0% | |
| GATAGCCCAGAGCAGGACAC+TGG | + | chr2_3:63987985-63988004 | Msa0305900:CDS | 60.0% | |
| TCTGAAGATCCCCCCACCCT+AGG | - | chr2_3:63988389-63988408 | None:intergenic | 60.0% | |
| !! | TGCGGGGGGAAGGTATTGTG+TGG | + | chr2_3:63989011-63989030 | Msa0305900:intron | 60.0% |
| !! | CGGAGGCATCTACGTCCAGA+GGG | + | chr2_3:63990148-63990167 | Msa0305900:CDS | 60.0% |
| CGGGGAGAAGCAACTAGACG+GGG | - | chr2_3:63990195-63990214 | None:intergenic | 60.0% | |
| ! | CCTTTTCTGCTCCGGCTACC+AGG | - | chr2_3:63990315-63990334 | None:intergenic | 60.0% |
| CCTGGTAGCCGGAGCAGAAA+AGG | + | chr2_3:63990312-63990331 | Msa0305900:CDS | 60.0% | |
| AGAGACACGGGGCACGACAC+TGG | + | chr2_3:63985813-63985832 | Msa0305900:intron | 65.0% | |
| AGCCAAGAGTCTGGAGGCGG+AGG | + | chr2_3:63990131-63990150 | Msa0305900:CDS | 65.0% | |
| TGCCTCCGCCTCCAGACTCT+TGG | - | chr2_3:63990136-63990155 | None:intergenic | 65.0% | |
| !! | GCGGAGGCATCTACGTCCAG+AGG | + | chr2_3:63990147-63990166 | Msa0305900:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 63985112 | 63990632 | 63985112 | ID=Msa0305900;Name=Msa0305900 |
| chr2_3 | mRNA | 63985112 | 63990632 | 63985112 | ID=Msa0305900-mRNA-1;Parent=Msa0305900;Name=Msa0305900-mRNA-1;_AED=0.14;_eAED=0.14;_QI=242|0.66|0.5|1|0.66|0.5|10|294|420 |
| chr2_3 | exon | 63985112 | 63985464 | 63985112 | ID=Msa0305900-mRNA-1:exon:21423;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63985583 | 63985680 | 63985583 | ID=Msa0305900-mRNA-1:exon:21424;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63986303 | 63986388 | 63986303 | ID=Msa0305900-mRNA-1:exon:21425;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63987645 | 63987730 | 63987645 | ID=Msa0305900-mRNA-1:exon:21426;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63987820 | 63988030 | 63987820 | ID=Msa0305900-mRNA-1:exon:21427;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63988408 | 63988570 | 63988408 | ID=Msa0305900-mRNA-1:exon:21428;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63989240 | 63989398 | 63989240 | ID=Msa0305900-mRNA-1:exon:21429;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63989538 | 63989603 | 63989538 | ID=Msa0305900-mRNA-1:exon:21430;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63989711 | 63989765 | 63989711 | ID=Msa0305900-mRNA-1:exon:21431;Parent=Msa0305900-mRNA-1 |
| chr2_3 | exon | 63990111 | 63990632 | 63990111 | ID=Msa0305900-mRNA-1:exon:21432;Parent=Msa0305900-mRNA-1 |
| chr2_3 | five_prime_UTR | 63985112 | 63985353 | 63985112 | ID=Msa0305900-mRNA-1:five_prime_utr;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63985354 | 63985464 | 63985354 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63985583 | 63985680 | 63985583 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63986303 | 63986388 | 63986303 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63987645 | 63987730 | 63987645 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63987820 | 63988030 | 63987820 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63988408 | 63988570 | 63988408 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63989240 | 63989398 | 63989240 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63989538 | 63989603 | 63989538 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63989711 | 63989765 | 63989711 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | CDS | 63990111 | 63990338 | 63990111 | ID=Msa0305900-mRNA-1:cds;Parent=Msa0305900-mRNA-1 |
| chr2_3 | three_prime_UTR | 63990339 | 63990632 | 63990339 | ID=Msa0305900-mRNA-1:three_prime_utr;Parent=Msa0305900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
