Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260200 | XP_003597836.2 | 87.810 | 443 | 17 | 2 | 1 | 406 | 1 | 443 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260200 | sp|Q4VA72|BRCC3_XENTR | 44.751 | 181 | 81 | 4 | 1 | 166 | 1 | 177 | 6.82e-46 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260200 | G7IMH2 | 87.810 | 443 | 17 | 2 | 1 | 406 | 1 | 443 | 0.0 | 757 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa0260200 | 0.810341 | 1.209488e-50 | -8.615850e-47 |
| Msa0010500 | Msa0260200 | 0.801621 | 8.257711e-49 | -8.615850e-47 |
| Msa0020390 | Msa0260200 | 0.806951 | 6.408703e-50 | -8.615850e-47 |
| Msa0029260 | Msa0260200 | 0.828007 | 1.141770e-54 | -8.615850e-47 |
| Msa0033110 | Msa0260200 | 0.809093 | 2.243764e-50 | -8.615850e-47 |
| Msa0033260 | Msa0260200 | 0.803938 | 2.745323e-49 | -8.615850e-47 |
| Msa0033880 | Msa0260200 | 0.814113 | 1.817612e-51 | -8.615850e-47 |
| Msa0037540 | Msa0260200 | -0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa0037590 | Msa0260200 | -0.803120 | 4.055812e-49 | -8.615850e-47 |
| Msa0090520 | Msa0260200 | 0.837998 | 3.732326e-57 | -8.615850e-47 |
| Msa0091410 | Msa0260200 | 0.802167 | 6.379141e-49 | -8.615850e-47 |
| Msa0091610 | Msa0260200 | 0.809370 | 1.956958e-50 | -8.615850e-47 |
| Msa0093010 | Msa0260200 | 0.804371 | 2.230664e-49 | -8.615850e-47 |
| Msa0100740 | Msa0260200 | 0.815927 | 7.194842e-52 | -8.615850e-47 |
| Msa0127850 | Msa0260200 | 0.809395 | 1.932757e-50 | -8.615850e-47 |
| Msa0128860 | Msa0260200 | 0.801546 | 8.555107e-49 | -8.615850e-47 |
| Msa0129190 | Msa0260200 | -0.810236 | 1.274107e-50 | -8.615850e-47 |
| Msa0137990 | Msa0260200 | 0.840901 | 6.574939e-58 | -8.615850e-47 |
| Msa0169300 | Msa0260200 | 0.826040 | 3.373837e-54 | -8.615850e-47 |
| Msa0174000 | Msa0260200 | 0.803023 | 4.247499e-49 | -8.615850e-47 |
| Msa0174730 | Msa0260200 | 0.801371 | 9.292829e-49 | -8.615850e-47 |
| Msa0183900 | Msa0260200 | 0.829335 | 5.454142e-55 | -8.615850e-47 |
| Msa0188350 | Msa0260200 | 0.835676 | 1.460973e-56 | -8.615850e-47 |
| Msa0189300 | Msa0260200 | 0.824839 | 6.495179e-54 | -8.615850e-47 |
| Msa0189520 | Msa0260200 | 0.809476 | 1.856605e-50 | -8.615850e-47 |
| Msa0207670 | Msa0260200 | 0.803816 | 2.910553e-49 | -8.615850e-47 |
| Msa0229170 | Msa0260200 | 0.831190 | 1.920797e-55 | -8.615850e-47 |
| Msa0231100 | Msa0260200 | 0.802919 | 4.464152e-49 | -8.615850e-47 |
| Msa0231660 | Msa0260200 | 0.811802 | 5.835075e-51 | -8.615850e-47 |
| Msa0257490 | Msa0260200 | 0.811313 | 7.451616e-51 | -8.615850e-47 |
| Msa0257520 | Msa0260200 | 0.817123 | 3.882876e-52 | -8.615850e-47 |
| Msa0260200 | Msa0269470 | 0.808840 | 2.541899e-50 | -8.615850e-47 |
| Msa0260200 | Msa0271360 | 0.800321 | 1.522800e-48 | -8.615850e-47 |
| Msa0260200 | Msa0281530 | 0.818725 | 1.687214e-52 | -8.615850e-47 |
| Msa0260200 | Msa0296820 | 0.813828 | 2.100235e-51 | -8.615850e-47 |
| Msa0260200 | Msa0305900 | 0.819386 | 1.193336e-52 | -8.615850e-47 |
| Msa0260200 | Msa0317970 | 0.810549 | 1.090909e-50 | -8.615850e-47 |
| Msa0260200 | Msa0320590 | 0.811714 | 6.098535e-51 | -8.615850e-47 |
| Msa0260200 | Msa0341690 | 0.803047 | 4.199384e-49 | -8.615850e-47 |
| Msa0260200 | Msa0357900 | 0.813283 | 2.768370e-51 | -8.615850e-47 |
| Msa0260200 | Msa0385490 | 0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa0260200 | Msa0385500 | 0.805253 | 1.459726e-49 | -8.615850e-47 |
| Msa0260200 | Msa0419520 | 0.802103 | 6.576191e-49 | -8.615850e-47 |
| Msa0260200 | Msa0423750 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0260200 | Msa0465550 | 0.806762 | 7.028987e-50 | -8.615850e-47 |
| Msa0260200 | Msa0508590 | 0.815036 | 1.135484e-51 | -8.615850e-47 |
| Msa0260200 | Msa0508630 | 0.804925 | 1.709167e-49 | -8.615850e-47 |
| Msa0260200 | Msa0532980 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa0260200 | Msa0581110 | 0.805132 | 1.547333e-49 | -8.615850e-47 |
| Msa0260200 | Msa0601150 | 0.809161 | 2.169676e-50 | -8.615850e-47 |
| Msa0260200 | Msa0620620 | 0.816850 | 4.471327e-52 | -8.615850e-47 |
| Msa0260200 | Msa0662630 | 0.801423 | 9.069779e-49 | -8.615850e-47 |
| Msa0260200 | Msa0698800 | 0.818068 | 2.377375e-52 | -8.615850e-47 |
| Msa0260200 | Msa0711150 | 0.807325 | 5.341273e-50 | -8.615850e-47 |
| Msa0260200 | Msa0794670 | 0.803442 | 3.479590e-49 | -8.615850e-47 |
| Msa0260200 | Msa0800370 | 0.807015 | 6.213967e-50 | -8.615850e-47 |
| Msa0260200 | Msa0822310 | -0.803911 | 2.780289e-49 | -8.615850e-47 |
| Msa0260200 | Msa0826760 | 0.809040 | 2.303060e-50 | -8.615850e-47 |
| Msa0260200 | Msa0827280 | 0.830956 | 2.193075e-55 | -8.615850e-47 |
| Msa0260200 | Msa0830540 | 0.809466 | 1.866554e-50 | -8.615850e-47 |
| Msa0260200 | Msa0865030 | 0.816133 | 6.469956e-52 | -8.615850e-47 |
| Msa0260200 | Msa0944200 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
| Msa0260200 | Msa1029970 | 0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0260200 | Msa1064250 | 0.808828 | 2.556127e-50 | -8.615850e-47 |
| Msa0260200 | Msa1072710 | 0.801156 | 1.028555e-48 | -8.615850e-47 |
| Msa0260200 | Msa1077030 | 0.806471 | 8.093216e-50 | -8.615850e-47 |
| Msa0260200 | Msa1089320 | 0.843369 | 1.461995e-58 | -8.615850e-47 |
| Msa0260200 | Msa1089450 | 0.803780 | 2.960049e-49 | -8.615850e-47 |
| Msa0260200 | Msa1104210 | 0.802172 | 6.363935e-49 | -8.615850e-47 |
| Msa0260200 | Msa1121680 | 0.811155 | 8.066304e-51 | -8.615850e-47 |
| Msa0260200 | Msa1126450 | 0.805034 | 1.622309e-49 | -8.615850e-47 |
| Msa0260200 | Msa1126830 | 0.804214 | 2.405590e-49 | -8.615850e-47 |
| Msa0260200 | Msa1133230 | 0.804177 | 2.448072e-49 | -8.615850e-47 |
| Msa0260200 | Msa1133250 | 0.800792 | 1.220680e-48 | -8.615850e-47 |
| Msa0260200 | Msa1160590 | 0.806242 | 9.044980e-50 | -8.615850e-47 |
| Msa0260200 | Msa1165780 | 0.813661 | 2.286417e-51 | -8.615850e-47 |
| Msa0260200 | Msa1206360 | 0.803796 | 2.938719e-49 | -8.615850e-47 |
| Msa0260200 | Msa1254730 | 0.805425 | 1.342965e-49 | -8.615850e-47 |
| Msa0260200 | Msa1262720 | 0.816529 | 5.276440e-52 | -8.615850e-47 |
| Msa0260200 | Msa1296830 | 0.813874 | 2.052470e-51 | -8.615850e-47 |
| Msa0260200 | Msa1306560 | 0.806586 | 7.653507e-50 | -8.615850e-47 |
| Msa0260200 | Msa1307180 | 0.803316 | 3.695494e-49 | -8.615850e-47 |
| Msa0260200 | Msa1316360 | 0.802682 | 4.996077e-49 | -8.615850e-47 |
| Msa0260200 | Msa1336560 | 0.804447 | 2.151224e-49 | -8.615850e-47 |
| Msa0260200 | Msa1351540 | 0.807434 | 5.063683e-50 | -8.615850e-47 |
| Msa0260200 | Msa1360980 | 0.807592 | 4.689349e-50 | -8.615850e-47 |
| Msa0260200 | Msa1364210 | 0.838553 | 2.686181e-57 | -8.615850e-47 |
| Msa0260200 | Msa1407190 | 0.800250 | 1.573716e-48 | -8.615850e-47 |
| Msa0260200 | Msa1419870 | 0.808725 | 2.689757e-50 | -8.615850e-47 |
| Msa0260200 | Msa1420990 | 0.807581 | 4.712502e-50 | -8.615850e-47 |
| Msa0260200 | Msa1436520 | 0.828971 | 6.682503e-55 | -8.615850e-47 |
| Msa0260200 | Msa1457920 | 0.808184 | 3.508712e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260200 | MtrunA17_Chr2g0332611 | 90.368 | 353 | 6 | 1 | 82 | 406 | 12 | 364 | 0.0 | 613 |
| Msa0260200 | MtrunA17_Chr2g0332601 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 2.90e-45 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260200 | AT1G80210.1 | 60.298 | 403 | 111 | 9 | 1 | 362 | 1 | 395 | 1.12e-158 | 453 |
| Msa0260200 | AT1G80210.2 | 61.067 | 375 | 99 | 8 | 1 | 334 | 1 | 369 | 1.21e-151 | 434 |
| Msa0260200 | AT3G06820.3 | 60.305 | 393 | 108 | 7 | 1 | 350 | 1 | 388 | 1.78e-147 | 424 |
| Msa0260200 | AT3G06820.2 | 60.305 | 393 | 108 | 7 | 1 | 350 | 1 | 388 | 1.78e-147 | 424 |
| Msa0260200 | AT3G06820.1 | 57.051 | 312 | 97 | 5 | 71 | 350 | 1 | 307 | 1.05e-103 | 310 |
Find 113 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTGATTCTGGGTTTAT+TGG | 0.115541 | 2_2:-57735642 | Msa0260200:CDS |
| CGATGCTCAGTGAAATATTT+TGG | 0.127476 | 2_2:-57732839 | Msa0260200:three_prime_UTR |
| ATGTATCAACTTCTTGATTC+TGG | 0.141321 | 2_2:-57735651 | Msa0260200:CDS |
| CTATTAATCTTTAACCTAAT+TGG | 0.182784 | 2_2:+57738156 | None:intergenic |
| CACTGAAACCGAAGAGATTA+TGG | 0.203215 | 2_2:-57737900 | Msa0260200:CDS |
| TTCTTGATTCTGGGTTTATT+GGG | 0.251629 | 2_2:-57735641 | Msa0260200:CDS |
| ATTTGTTTAATTAGCCAATT+AGG | 0.275927 | 2_2:-57738170 | Msa0260200:five_prime_UTR |
| TTGTTCCTCCAAGAATAAAA+TGG | 0.292010 | 2_2:+57732771 | None:intergenic |
| AGCTATGCACCGCTCAAATA+TGG | 0.296293 | 2_2:-57734770 | Msa0260200:CDS |
| AAAATTAAATCAGGACTATA+CGG | 0.302565 | 2_2:-57732702 | Msa0260200:three_prime_UTR |
| GAGATTATGGGTCTTCTTCT+TGG | 0.309605 | 2_2:-57737887 | Msa0260200:CDS |
| GAATCACCAGTGTCCTGCTC+TGG | 0.330705 | 2_2:+57735322 | None:intergenic |
| TCTTGAAGTGCGTTGATTGC+AGG | 0.331174 | 2_2:+57733593 | None:intergenic |
| AGTTATCTCAATGACATTCA+TGG | 0.337538 | 2_2:-57732743 | Msa0260200:three_prime_UTR |
| GGAGTGTGACTGCATTGATA+TGG | 0.369051 | 2_2:-57737722 | Msa0260200:CDS |
| TGTATCAACTTCTTGATTCT+GGG | 0.370430 | 2_2:-57735650 | Msa0260200:CDS |
| GACTAAGAGAGAATGAAATT+CGG | 0.373072 | 2_2:-57733568 | Msa0260200:CDS |
| GAAGCAGCAGCCAACTGTTC+AGG | 0.373869 | 2_2:+57737645 | None:intergenic |
| TGAAAATGTCCGAAGAAGTT+TGG | 0.381529 | 2_2:-57737949 | Msa0260200:CDS |
| AATGCCGATGCCAACTATCT+AGG | 0.397041 | 2_2:-57734883 | Msa0260200:CDS |
| AGTTATGTCAAAATTAAATC+AGG | 0.397209 | 2_2:-57732711 | Msa0260200:three_prime_UTR |
| AGAGGGAGTGAAGCAAGTTT+AGG | 0.400423 | 2_2:-57733146 | Msa0260200:CDS |
| CGTCGATCAGACCTTGTTTG+AGG | 0.408498 | 2_2:+57737690 | None:intergenic |
| GAGTGAAGAAGCCAAGAGTC+TGG | 0.408537 | 2_2:-57733189 | Msa0260200:CDS |
| ACTGAAACCGAAGAGATTAT+GGG | 0.413726 | 2_2:-57737899 | Msa0260200:CDS |
| AGATGAACTTCCTCGATGTA+TGG | 0.414680 | 2_2:+57733082 | None:intergenic |
| ACTAAGAGAGAATGAAATTC+GGG | 0.428257 | 2_2:-57733567 | Msa0260200:intron |
| TGATGAATCTATATGAATAA+TGG | 0.429530 | 2_2:+57735399 | None:intergenic |
| GAGAATTTAACAACAAGATC+TGG | 0.435278 | 2_2:-57735364 | Msa0260200:CDS |
| CACAGAATGACTGTTACAAC+TGG | 0.444669 | 2_2:-57737017 | Msa0260200:intron |
| GCATGTTAACCAAACTTCTT+CGG | 0.444704 | 2_2:+57737940 | None:intergenic |
| CCTGGTAGCCGGAGCAGAAA+AGG | 0.449380 | 2_2:-57732999 | Msa0260200:CDS |
| TCTTCTTCTTGGCGATATCC+AGG | 0.452533 | 2_2:-57737876 | Msa0260200:intron |
| AACAAGATCTGGTTACTTCA+AGG | 0.457060 | 2_2:-57735353 | Msa0260200:CDS |
| TGCCTCCGCCTCCAGACTCT+TGG | 0.459710 | 2_2:+57733178 | None:intergenic |
| AGCCAAGAGTCTGGAGGCGG+AGG | 0.461420 | 2_2:-57733180 | Msa0260200:CDS |
| GGAAGAACAACGAGGGTGAT+AGG | 0.461704 | 2_2:-57736996 | Msa0260200:CDS |
| AAGAAGACCCATAATCTCTT+CGG | 0.464604 | 2_2:+57737892 | None:intergenic |
| GAGAAGTGCTGGTGCTAGTA+AGG | 0.473131 | 2_2:-57735299 | Msa0260200:intron |
| TAAACTTGCTTCACTCCCTC+TGG | 0.474010 | 2_2:+57733148 | None:intergenic |
| TATGGGAGATGCAACTTGAC+GGG | 0.478253 | 2_2:+57733100 | None:intergenic |
| ATGCCGATGCCAACTATCTA+GGG | 0.486571 | 2_2:-57734882 | Msa0260200:CDS |
| TCTGCTTTCCATCAGATGAC+TGG | 0.487274 | 2_2:+57735467 | None:intergenic |
| GAGTGTGACTGCATTGATAT+GGG | 0.495477 | 2_2:-57737721 | Msa0260200:CDS |
| GGTTGAAGAAGGAGGCGAGA+GGG | 0.499327 | 2_2:-57738083 | Msa0260200:five_prime_UTR |
| CATACTTTCTGACATATCCA+TGG | 0.509731 | 2_2:+57734798 | None:intergenic |
| CAGAGTTCAAGTGAATCTCT+TGG | 0.511986 | 2_2:-57733041 | Msa0260200:CDS |
| GTTAAATTCTCTGAGGAACT+TGG | 0.513339 | 2_2:+57735376 | None:intergenic |
| ATTGCTTTCCAGTCATCTGA+TGG | 0.523557 | 2_2:-57735475 | Msa0260200:CDS |
| CTCTGCGAGTTTCTTTGACG+AGG | 0.523918 | 2_2:+57733059 | None:intergenic |
| AATCACCAGTGTCCTGCTCT+GGG | 0.524238 | 2_2:+57735323 | None:intergenic |
| CATAATCTCTTCGGTTTCAG+TGG | 0.524734 | 2_2:+57737901 | None:intergenic |
| TTTACAGGAGACAGAGGTAT+GGG | 0.525737 | 2_2:+57735430 | None:intergenic |
| GATGAACTTCCTCGATGTAT+GGG | 0.533300 | 2_2:+57733083 | None:intergenic |
| TAGACAGTTGAGGTTGAAGA+AGG | 0.533784 | 2_2:-57738094 | Msa0260200:five_prime_UTR |
| ATGATGATAGCGGCGAATCA+AGG | 0.533813 | 2_2:+57734008 | None:intergenic |
| TAACAATGTTGAATTCTCGT+TGG | 0.537203 | 2_2:-57732975 | Msa0260200:three_prime_UTR |
| TACAATTGTGAGTGGTGACT+TGG | 0.540547 | 2_2:-57732794 | Msa0260200:three_prime_UTR |
| ATCTCAATGACATTCATGGT+TGG | 0.540600 | 2_2:-57732739 | Msa0260200:three_prime_UTR |
| GTATGGGAGATGCAACTTGA+CGG | 0.541009 | 2_2:+57733099 | None:intergenic |
| ACGGGGAGAAGCAACTAGAC+GGG | 0.542351 | 2_2:+57733118 | None:intergenic |
| TCAAAGAGTGTAGCTAGTCC+TGG | 0.543158 | 2_2:-57733017 | Msa0260200:CDS |
| CAAGGATGGCAGCACATGAA+GGG | 0.544109 | 2_2:+57734042 | None:intergenic |
| CAAGGGAGATAGCCCAGAGC+AGG | 0.545536 | 2_2:-57735335 | Msa0260200:CDS |
| ATTTACAGGAGACAGAGGTA+TGG | 0.546956 | 2_2:+57735429 | None:intergenic |
| TATCTAGGGAGCGTAAAAGA+TGG | 0.550604 | 2_2:-57734868 | Msa0260200:CDS |
| GAACAACGAGGGTGATAGGC+TGG | 0.559162 | 2_2:-57736992 | Msa0260200:CDS |
| GTGTAGCTAGTCCTGGTAGC+CGG | 0.559875 | 2_2:-57733010 | Msa0260200:CDS |
| TGGTGCAGAGTATATTAGAA+AGG | 0.560870 | 2_2:-57734071 | Msa0260200:CDS |
| ACAAGGATGGCAGCACATGA+AGG | 0.562454 | 2_2:+57734041 | None:intergenic |
| ACAAGATCTGGTTACTTCAA+GGG | 0.568314 | 2_2:-57735352 | Msa0260200:CDS |
| AAATTAAATCAGGACTATAC+GGG | 0.570034 | 2_2:-57732701 | Msa0260200:three_prime_UTR |
| ACTGGTGATTCGAGAAGTGC+TGG | 0.570423 | 2_2:-57735310 | Msa0260200:CDS |
| GACGGGGAGAAGCAACTAGA+CGG | 0.572216 | 2_2:+57733117 | None:intergenic |
| ACATACCGACATGTGAAGGC+AGG | 0.575866 | 2_2:+57736943 | None:intergenic |
| AGAAGCCAAGAGTCTGGAGG+CGG | 0.576842 | 2_2:-57733183 | Msa0260200:CDS |
| GCAACATGTACTATTTGAAG+AGG | 0.579067 | 2_2:-57733975 | Msa0260200:CDS |
| CAGTAATATGAGGATGTGAA+TGG | 0.584536 | 2_2:+57736967 | None:intergenic |
| GGATATGTCAGAAAGTATGC+AGG | 0.584919 | 2_2:-57734794 | Msa0260200:CDS |
| GAAGGCAGGACAGTAATATG+AGG | 0.590307 | 2_2:+57736957 | None:intergenic |
| ACAGTTGAGGTTGAAGAAGG+AGG | 0.602951 | 2_2:-57738091 | Msa0260200:five_prime_UTR |
| GATAGCCCAGAGCAGGACAC+TGG | 0.603898 | 2_2:-57735328 | Msa0260200:CDS |
| AGGTTGAAGAAGGAGGCGAG+AGG | 0.607767 | 2_2:-57738084 | Msa0260200:five_prime_UTR |
| AAGTACATACCGACATGTGA+AGG | 0.609102 | 2_2:+57736939 | None:intergenic |
| AAGCCATCTTACAAAATACA+AGG | 0.610913 | 2_2:-57733934 | Msa0260200:intron |
| CATCGCAGTTGATGATCCCA+TGG | 0.612966 | 2_2:-57734815 | Msa0260200:CDS |
| ATGTACTATTTGAAGAGGAA+CGG | 0.613140 | 2_2:-57733970 | Msa0260200:CDS |
| TGTTTCTGACTAGACAGTTG+AGG | 0.614389 | 2_2:-57738104 | Msa0260200:five_prime_UTR |
| ATACTTTCTGACATATCCAT+GGG | 0.614506 | 2_2:+57734799 | None:intergenic |
| ACTGTCCTGCCTTCACATGT+CGG | 0.615521 | 2_2:-57736948 | Msa0260200:intron |
| TTCGCCGCTATCATCATACA+AGG | 0.623157 | 2_2:-57734002 | Msa0260200:CDS |
| TTACAACGAAGATGCAAACA+AGG | 0.623673 | 2_2:-57735604 | Msa0260200:intron |
| AAGGATGGCAGCACATGAAG+GGG | 0.623863 | 2_2:+57734043 | None:intergenic |
| GCGGAGGCATCTACGTCCAG+AGG | 0.627316 | 2_2:-57733164 | Msa0260200:CDS |
| GCTCCCTAGATAGTTGGCAT+CGG | 0.649706 | 2_2:+57734879 | None:intergenic |
| TCTTGTTGTTAAATTCTCTG+AGG | 0.649767 | 2_2:+57735369 | None:intergenic |
| GGGGTGCATCTCCTCAAACA+AGG | 0.651860 | 2_2:-57737701 | Msa0260200:CDS |
| CGGGGAGAAGCAACTAGACG+GGG | 0.653934 | 2_2:+57733119 | None:intergenic |
| ATCAAGGTTGATAAAAGACA+AGG | 0.656437 | 2_2:+57734024 | None:intergenic |
| CGGAGGCATCTACGTCCAGA+GGG | 0.659336 | 2_2:-57733163 | Msa0260200:CDS |
| AGTGTGACTGCATTGATATG+GGG | 0.661338 | 2_2:-57737720 | Msa0260200:CDS |
| ACCTCATGTCCATATTTGAG+CGG | 0.663052 | 2_2:+57734761 | None:intergenic |
| ATGGGAGATGCAACTTGACG+GGG | 0.663091 | 2_2:+57733101 | None:intergenic |
| CACCACTCACAATTGTACAC+AGG | 0.666140 | 2_2:+57732800 | None:intergenic |
| ACCGCTCAAATATGGACATG+AGG | 0.667262 | 2_2:-57734762 | Msa0260200:intron |
| TGAAGAAGCCAAGAGTCTGG+AGG | 0.667597 | 2_2:-57733186 | Msa0260200:CDS |
| AGATCCTTGTATGATGATAG+CGG | 0.689342 | 2_2:+57733998 | None:intergenic |
| ACATAGAATGTACATGATAG+CGG | 0.690172 | 2_2:-57732896 | Msa0260200:three_prime_UTR |
| TACAACTGGAAGAACAACGA+GGG | 0.713101 | 2_2:-57737003 | Msa0260200:CDS |
| AGGTTGATAAAAGACAAGGA+TGG | 0.722279 | 2_2:+57734028 | None:intergenic |
| TACCTGTGTACAATTGTGAG+TGG | 0.729721 | 2_2:-57732802 | Msa0260200:three_prime_UTR |
| GTTGCATCTCCCATACATCG+AGG | 0.759729 | 2_2:-57733092 | Msa0260200:CDS |
| TTACAACTGGAAGAACAACG+AGG | 0.766921 | 2_2:-57737004 | Msa0260200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATAAAGAAAAAAT+TGG | + | chr2_2:57733070-57733089 | None:intergenic | 10.0% |
| !!! | AATAAAGAATTATTACTTTT+TGG | - | chr2_2:57737280-57737299 | Msa0260200:intron | 10.0% |
| !!! | TATTAAAATTTTCAACTTGA+TGG | + | chr2_2:57732713-57732732 | None:intergenic | 15.0% |
| !!! | AAAACTCATTTTTAATTCAA+TGG | - | chr2_2:57733346-57733365 | Msa0260200:intron | 15.0% |
| !!! | TTTAAATTGTAATTTTTCCT+AGG | - | chr2_2:57735964-57735983 | Msa0260200:intron | 15.0% |
| !!! | TTAAATTGTAATTTTTCCTA+GGG | - | chr2_2:57735965-57735984 | Msa0260200:intron | 15.0% |
| !!! | GTTTTAAAATAACACATATT+TGG | - | chr2_2:57736808-57736827 | Msa0260200:intron | 15.0% |
| !! | AAATAGGACTAATAAATAAA+CGG | + | chr2_2:57737240-57737259 | None:intergenic | 15.0% |
| !!! | TTTATTAGTCCTATTTTTAT+TGG | - | chr2_2:57737244-57737263 | Msa0260200:intron | 15.0% |
| !! | GTAAATAACAGTAAAAAAAT+TGG | + | chr2_2:57737487-57737506 | None:intergenic | 15.0% |
| !!! | AAGTTGAAAATTTTAATAGC+TGG | - | chr2_2:57732715-57732734 | Msa0260200:three_prime_UTR | 20.0% |
| !! | ATTTGTTTAATTAGCCAATT+AGG | - | chr2_2:57732738-57732757 | Msa0260200:three_prime_UTR | 20.0% |
| !! | CTATTAATCTTTAACCTAAT+TGG | + | chr2_2:57732755-57732774 | None:intergenic | 20.0% |
| !!! | AGAATGAGATTATCATTTTA+GGG | - | chr2_2:57732878-57732897 | Msa0260200:three_prime_UTR | 20.0% |
| !!! | ATTATCATTTTAGGGTTTTT+AGG | - | chr2_2:57732886-57732905 | Msa0260200:three_prime_UTR | 20.0% |
| !!! | TTATCATTTTAGGGTTTTTA+GGG | - | chr2_2:57732887-57732906 | Msa0260200:three_prime_UTR | 20.0% |
| !! | AACATTGTGAAATACAAATT+GGG | + | chr2_2:57733121-57733140 | None:intergenic | 20.0% |
| !! | ATAGACTATAAATAATAGGT+AGG | + | chr2_2:57734497-57734516 | None:intergenic | 20.0% |
| !! | GATGATAGACTATAAATAAT+AGG | + | chr2_2:57734501-57734520 | None:intergenic | 20.0% |
| !! | TGATGAATCTATATGAATAA+TGG | + | chr2_2:57735512-57735531 | None:intergenic | 20.0% |
| !! | AAATGCAATTATGATTATAC+TGG | + | chr2_2:57735886-57735905 | None:intergenic | 20.0% |
| !! | GTCAAACTTTGAATTATAAA+TGG | - | chr2_2:57736653-57736672 | Msa0260200:intron | 20.0% |
| !! | TTAAAATAACACATATTTGG+TGG | - | chr2_2:57736811-57736830 | Msa0260200:intron | 20.0% |
| !!! | CGTACATATATGAAATTTTA+TGG | - | chr2_2:57737029-57737048 | Msa0260200:intron | 20.0% |
| !!! | ATTTTATGGAAACACTATTT+TGG | - | chr2_2:57737043-57737062 | Msa0260200:intron | 20.0% |
| !!! | TTTTATGGAAACACTATTTT+GGG | - | chr2_2:57737044-57737063 | Msa0260200:intron | 20.0% |
| !! | AATAGGACTAATAAATAAAC+GGG | + | chr2_2:57737239-57737258 | None:intergenic | 20.0% |
| !! | AAGAACAAACCAATAAAAAT+AGG | + | chr2_2:57737256-57737275 | None:intergenic | 20.0% |
| !! | TTGGAAATAAAATTTCATAG+AGG | + | chr2_2:57737468-57737487 | None:intergenic | 20.0% |
| !!! | TTTTTACTGTTATTTACAGA+AGG | - | chr2_2:57737490-57737509 | Msa0260200:intron | 20.0% |
| !!! | TTAGTTCTGAATCTTAATTA+GGG | + | chr2_2:57737516-57737535 | None:intergenic | 20.0% |
| !! | AGTTATGTCAAAATTAAATC+AGG | - | chr2_2:57738197-57738216 | Msa0260200:five_prime_UTR | 20.0% |
| !! | AAAATTAAATCAGGACTATA+CGG | - | chr2_2:57738206-57738225 | Msa0260200:five_prime_UTR | 20.0% |
| !! | GAGAATGAGATTATCATTTT+AGG | - | chr2_2:57732877-57732896 | Msa0260200:three_prime_UTR | 25.0% |
| ! | ACATTGTGAAATACAAATTG+GGG | + | chr2_2:57733120-57733139 | None:intergenic | 25.0% |
| ! | CAACATTGTGAAATACAAAT+TGG | + | chr2_2:57733122-57733141 | None:intergenic | 25.0% |
| ! | AATAACACAGAACAAGAAAA+AGG | + | chr2_2:57733306-57733325 | None:intergenic | 25.0% |
| ! | ATTTCTAATTGAAACATGTG+TGG | + | chr2_2:57733508-57733527 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTAACCAAACA+GGG | + | chr2_2:57733558-57733577 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTAACCAAAC+AGG | + | chr2_2:57733559-57733578 | None:intergenic | 25.0% |
| ! | TGTATAACATAAAGGATGTT+AGG | + | chr2_2:57734188-57734207 | None:intergenic | 25.0% |
| ! | ATATGAATCAAATATGTTGC+TGG | - | chr2_2:57734322-57734341 | Msa0260200:intron | 25.0% |
| ! | ATAGATACTAGATCAAAATG+TGG | - | chr2_2:57734357-57734376 | Msa0260200:intron | 25.0% |
| ! | CTTGAATACATTGAATGTAA+TGG | + | chr2_2:57734412-57734431 | None:intergenic | 25.0% |
| !!! | ATTTACTTTGGTTTTGGATA+GGG | + | chr2_2:57734461-57734480 | None:intergenic | 25.0% |
| ! | GAAGTATAAATAGCAGATAT+AGG | + | chr2_2:57734837-57734856 | None:intergenic | 25.0% |
| !!! | TGCTATTTATACTTCACTTT+TGG | - | chr2_2:57734842-57734861 | Msa0260200:CDS | 25.0% |
| !!! | TACTTCACTTTTGGTATTTA+AGG | - | chr2_2:57734851-57734870 | Msa0260200:CDS | 25.0% |
| ! | TGTAAGACATAGAAAATGTA+TGG | - | chr2_2:57734894-57734913 | Msa0260200:CDS | 25.0% |
| !!! | GTTCTATAAATTAGGTTGAA+AGG | - | chr2_2:57734971-57734990 | Msa0260200:intron | 25.0% |
| !! | TAATGATTATACTGTTGCTT+TGG | + | chr2_2:57735196-57735215 | None:intergenic | 25.0% |
| !! | TTTACTATTTTGTAGATGTG+CGG | - | chr2_2:57735225-57735244 | Msa0260200:intron | 25.0% |
| !!! | ATAATGGAGCTTTTATTTAC+AGG | + | chr2_2:57735496-57735515 | None:intergenic | 25.0% |
| ! | TCACTCACAAAAATATAGAT+TGG | + | chr2_2:57735748-57735767 | None:intergenic | 25.0% |
| ! | GAAATTCTTTCCTTTATACT+GGG | - | chr2_2:57735785-57735804 | Msa0260200:intron | 25.0% |
| ! | AACATCACTTTATCAACAAA+AGG | + | chr2_2:57735823-57735842 | None:intergenic | 25.0% |
| ! | ATAAAGTGATGTTGATCTTA+TGG | - | chr2_2:57735830-57735849 | Msa0260200:intron | 25.0% |
| !! | ATAATTGCATTTTTCTGTCT+AGG | - | chr2_2:57735894-57735913 | Msa0260200:intron | 25.0% |
| ! | ACTGAAATTAGGAAGATTAA+GGG | - | chr2_2:57736367-57736386 | Msa0260200:intron | 25.0% |
| ! | TTACAGTAAAATGGATATCA+GGG | + | chr2_2:57736398-57736417 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATGGATATC+AGG | + | chr2_2:57736399-57736418 | None:intergenic | 25.0% |
| ! | CATTACTGTTTACAGTAAAA+TGG | + | chr2_2:57736407-57736426 | None:intergenic | 25.0% |
| ! | ATAGGCATTTCATATATACT+TGG | + | chr2_2:57736547-57736566 | None:intergenic | 25.0% |
| ! | TTAGTGTACTATGTTATCAT+AGG | + | chr2_2:57736565-57736584 | None:intergenic | 25.0% |
| ! | GCATTAGAAATATAATCATG+CGG | - | chr2_2:57736590-57736609 | Msa0260200:intron | 25.0% |
| ! | CATTAGAAATATAATCATGC+GGG | - | chr2_2:57736591-57736610 | Msa0260200:intron | 25.0% |
| ! | ATTAGAAATATAATCATGCG+GGG | - | chr2_2:57736592-57736611 | Msa0260200:intron | 25.0% |
| ! | ATTGTATAATGATTGTTCAC+AGG | - | chr2_2:57736733-57736752 | Msa0260200:intron | 25.0% |
| !!! | TGTTATTTTAAAACCCAAGA+TGG | + | chr2_2:57736802-57736821 | None:intergenic | 25.0% |
| ! | ATAAAATTTCATAGAGGATC+AGG | + | chr2_2:57737462-57737481 | None:intergenic | 25.0% |
| !!! | GTTAGTTCTGAATCTTAATT+AGG | + | chr2_2:57737517-57737536 | None:intergenic | 25.0% |
| ! | ATTAAGATTCAGAACTAACT+TGG | - | chr2_2:57737518-57737537 | Msa0260200:intron | 25.0% |
| !! | ACAGAAATCTCAAATTTGTT+GGG | + | chr2_2:57737620-57737639 | None:intergenic | 25.0% |
| !! | TTTCAAACTAGCAAATTTTG+CGG | + | chr2_2:57738048-57738067 | None:intergenic | 25.0% |
| ! | GACATTTTCGCGAAAAAAAT+TGG | + | chr2_2:57732928-57732947 | None:intergenic | 30.0% |
| AATTGGGATTATACTATACC+TGG | + | chr2_2:57733053-57733072 | None:intergenic | 30.0% | |
| !! | ATTTTTCAGCATTCGAAGAA+TGG | - | chr2_2:57733164-57733183 | Msa0260200:CDS | 30.0% |
| !! | TTTTTCAGCATTCGAAGAAT+GGG | - | chr2_2:57733165-57733184 | Msa0260200:CDS | 30.0% |
| ATTGAATGTAATTACACCTG+CGG | - | chr2_2:57733462-57733481 | Msa0260200:intron | 30.0% | |
| AACCATTGCATTAAACACAT+GGG | + | chr2_2:57733779-57733798 | None:intergenic | 30.0% | |
| AAACCATTGCATTAAACACA+TGG | + | chr2_2:57733780-57733799 | None:intergenic | 30.0% | |
| AGAACAGCAACTATCAAAAT+TGG | + | chr2_2:57733819-57733838 | None:intergenic | 30.0% | |
| ! | TTGCTGTTCTTAGTGATTTA+AGG | - | chr2_2:57733829-57733848 | Msa0260200:intron | 30.0% |
| GAAGACAATATCGAAACAAT+GGG | + | chr2_2:57734010-57734029 | None:intergenic | 30.0% | |
| AGAAGACAATATCGAAACAA+TGG | + | chr2_2:57734011-57734030 | None:intergenic | 30.0% | |
| !!! | TTGTTTTAGTTGTTTGTGCT+TGG | - | chr2_2:57734051-57734070 | Msa0260200:CDS | 30.0% |
| TCATAAATGCCATACACATT+AGG | + | chr2_2:57734092-57734111 | None:intergenic | 30.0% | |
| TGTTAGCATAGATTTGAGAA+AGG | - | chr2_2:57734154-57734173 | Msa0260200:intron | 30.0% | |
| CTACGAACTGTATAACATAA+AGG | + | chr2_2:57734196-57734215 | None:intergenic | 30.0% | |
| !! | GTCAACAGTATTTTTGTGTA+TGG | - | chr2_2:57734224-57734243 | Msa0260200:intron | 30.0% |
| !!! | GATTTACTTTGGTTTTGGAT+AGG | + | chr2_2:57734462-57734481 | None:intergenic | 30.0% |
| AGTCTTCGTATAATTTCTCA+TGG | + | chr2_2:57734592-57734611 | None:intergenic | 30.0% | |
| CTGTTTCAATGAAACAATAC+AGG | + | chr2_2:57734633-57734652 | None:intergenic | 30.0% | |
| ATAATTGTACATGCCATGTA+GGG | + | chr2_2:57734808-57734827 | None:intergenic | 30.0% | |
| !! | TCACTTTTGGTATTTAAGGT+AGG | - | chr2_2:57734855-57734874 | Msa0260200:CDS | 30.0% |
| GCTAGAGAGTTCTATAAATT+AGG | - | chr2_2:57734963-57734982 | Msa0260200:intron | 30.0% | |
| CAGTACTCACTATTCATATA+CGG | - | chr2_2:57735023-57735042 | Msa0260200:intron | 30.0% | |
| TACGGATTCTAAACTTCTAA+TGG | - | chr2_2:57735041-57735060 | Msa0260200:intron | 30.0% | |
| ! | TGCTTTGGATAAAATCAAAC+AGG | + | chr2_2:57735181-57735200 | None:intergenic | 30.0% |
| ATGTATCAACTTCTTGATTC+TGG | - | chr2_2:57735257-57735276 | Msa0260200:intron | 30.0% | |
| TGTATCAACTTCTTGATTCT+GGG | - | chr2_2:57735258-57735277 | Msa0260200:intron | 30.0% | |
| TTCTTGATTCTGGGTTTATT+GGG | - | chr2_2:57735267-57735286 | Msa0260200:intron | 30.0% | |
| !! | TCTTGTTGTTAAATTCTCTG+AGG | + | chr2_2:57735542-57735561 | None:intergenic | 30.0% |
| GAGAATTTAACAACAAGATC+TGG | - | chr2_2:57735544-57735563 | Msa0260200:intron | 30.0% | |
| AACTGTTGTCTATTCTTCAT+GGG | + | chr2_2:57735669-57735688 | None:intergenic | 30.0% | |
| AAACTGTTGTCTATTCTTCA+TGG | + | chr2_2:57735670-57735689 | None:intergenic | 30.0% | |
| TTACATTTGAATGCAGAACA+TGG | - | chr2_2:57735702-57735721 | Msa0260200:intron | 30.0% | |
| AGTGAAGTTCTTAAAGATCA+GGG | - | chr2_2:57735763-57735782 | Msa0260200:intron | 30.0% | |
| GGAAATTCTTTCCTTTATAC+TGG | - | chr2_2:57735784-57735803 | Msa0260200:intron | 30.0% | |
| GCAATTATGATTATACTGGT+GGG | + | chr2_2:57735882-57735901 | None:intergenic | 30.0% | |
| TGCAATTATGATTATACTGG+TGG | + | chr2_2:57735883-57735902 | None:intergenic | 30.0% | |
| ! | AATTGTAATTTTTCCTAGGG+TGG | - | chr2_2:57735968-57735987 | Msa0260200:intron | 30.0% |
| ! | ATTGTAATTTTTCCTAGGGT+GGG | - | chr2_2:57735969-57735988 | Msa0260200:intron | 30.0% |
| ATACTTTCTGACATATCCAT+GGG | + | chr2_2:57736112-57736131 | None:intergenic | 30.0% | |
| TGTTTATCAACCGACAATTT+AGG | - | chr2_2:57736206-57736225 | Msa0260200:intron | 30.0% | |
| AAAAAACACGCCTAAATTGT+CGG | + | chr2_2:57736219-57736238 | None:intergenic | 30.0% | |
| TTCCTAATTTCAGTCTCTAA+TGG | + | chr2_2:57736361-57736380 | None:intergenic | 30.0% | |
| GACTGAAATTAGGAAGATTA+AGG | - | chr2_2:57736366-57736385 | Msa0260200:intron | 30.0% | |
| CTGAAATTAGGAAGATTAAG+GGG | - | chr2_2:57736368-57736387 | Msa0260200:intron | 30.0% | |
| TTAGAAATATAATCATGCGG+GGG | - | chr2_2:57736593-57736612 | Msa0260200:intron | 30.0% | |
| ! | ACCATGTCTAATCTTTTATG+AGG | - | chr2_2:57736759-57736778 | Msa0260200:intron | 30.0% |
| ACCTCATAAAAGATTAGACA+TGG | + | chr2_2:57736763-57736782 | None:intergenic | 30.0% | |
| !! | ATCAAGGTTGATAAAAGACA+AGG | + | chr2_2:57736887-57736906 | None:intergenic | 30.0% |
| ATGTACTATTTGAAGAGGAA+CGG | - | chr2_2:57736938-57736957 | Msa0260200:intron | 30.0% | |
| AAGCCATCTTACAAAATACA+AGG | - | chr2_2:57736974-57736993 | Msa0260200:CDS | 30.0% | |
| AAAGTACAAACAAATGGCAT+AGG | + | chr2_2:57737111-57737130 | None:intergenic | 30.0% | |
| CCATTTGTTTGTACTTTGTA+GGG | - | chr2_2:57737114-57737133 | Msa0260200:intron | 30.0% | |
| GACTAAGAGAGAATGAAATT+CGG | - | chr2_2:57737340-57737359 | Msa0260200:intron | 30.0% | |
| ACTAAGAGAGAATGAAATTC+GGG | - | chr2_2:57737341-57737360 | Msa0260200:intron | 30.0% | |
| ! | AATAACTTGTGAGCATGTTT+AGG | + | chr2_2:57737591-57737610 | None:intergenic | 30.0% |
| GACAGAAATCTCAAATTTGT+TGG | + | chr2_2:57737621-57737640 | None:intergenic | 30.0% | |
| TAACAATGTTGAATTCTCGT+TGG | - | chr2_2:57737933-57737952 | Msa0260200:CDS | 30.0% | |
| ACATAGAATGTACATGATAG+CGG | - | chr2_2:57738012-57738031 | Msa0260200:five_prime_UTR | 30.0% | |
| !!! | CAGTGAAATATTTTGGTTGT+TGG | - | chr2_2:57738076-57738095 | Msa0260200:five_prime_UTR | 30.0% |
| TTGTTCCTCCAAGAATAAAA+TGG | + | chr2_2:57738140-57738159 | None:intergenic | 30.0% | |
| AGTTATCTCAATGACATTCA+TGG | - | chr2_2:57738165-57738184 | Msa0260200:five_prime_UTR | 30.0% | |
| TGAAAATGTCCGAAGAAGTT+TGG | - | chr2_2:57732959-57732978 | Msa0260200:three_prime_UTR | 35.0% | |
| GCATGTTAACCAAACTTCTT+CGG | + | chr2_2:57732971-57732990 | None:intergenic | 35.0% | |
| ACTGAAACCGAAGAGATTAT+GGG | - | chr2_2:57733009-57733028 | Msa0260200:CDS | 35.0% | |
| AAGAAGACCCATAATCTCTT+CGG | + | chr2_2:57733019-57733038 | None:intergenic | 35.0% | |
| TGAAACTAATCCTGAACAGT+TGG | - | chr2_2:57733253-57733272 | Msa0260200:intron | 35.0% | |
| TGCTTCATAAGTGATATGTG+AGG | + | chr2_2:57733384-57733403 | None:intergenic | 35.0% | |
| GAGAGCTTATGAAAATAAGC+TGG | - | chr2_2:57733672-57733691 | Msa0260200:intron | 35.0% | |
| ! | GCTTATTTGAGTTTACCTAC+CGG | + | chr2_2:57733743-57733762 | None:intergenic | 35.0% |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr2_2:57733753-57733772 | Msa0260200:intron | 35.0% | |
| CATTCTGTGCTATGAAGTTA+AGG | + | chr2_2:57733880-57733899 | None:intergenic | 35.0% | |
| CAGTAATATGAGGATGTGAA+TGG | + | chr2_2:57733944-57733963 | None:intergenic | 35.0% | |
| AATATCGAAACAATGGGAGA+CGG | + | chr2_2:57734004-57734023 | None:intergenic | 35.0% | |
| TTAGTTGTTTGTGCTTGGAT+TGG | - | chr2_2:57734056-57734075 | Msa0260200:CDS | 35.0% | |
| GAACTGAATCCTAATGTGTA+TGG | - | chr2_2:57734080-57734099 | Msa0260200:intron | 35.0% | |
| CCTTCAATTGATGTTGAAGT+TGG | + | chr2_2:57734283-57734302 | None:intergenic | 35.0% | |
| CCAACTTCAACATCAATTGA+AGG | - | chr2_2:57734280-57734299 | Msa0260200:intron | 35.0% | |
| AATCAAATATGTTGCTGGAG+AGG | - | chr2_2:57734327-57734346 | Msa0260200:intron | 35.0% | |
| TTCAATGTATTCAAGCATCC+AGG | - | chr2_2:57734417-57734436 | Msa0260200:intron | 35.0% | |
| !!! | TTTGGATAGGGTTTTAGAGT+GGG | + | chr2_2:57734449-57734468 | None:intergenic | 35.0% |
| !!! | TTTTGGATAGGGTTTTAGAG+TGG | + | chr2_2:57734450-57734469 | None:intergenic | 35.0% |
| !! | CGACAGATTTACTTTGGTTT+TGG | + | chr2_2:57734467-57734486 | None:intergenic | 35.0% |
| TCTAACTAACTCACAGACAA+AGG | - | chr2_2:57734529-57734548 | Msa0260200:intron | 35.0% | |
| CTAACTAACTCACAGACAAA+GGG | - | chr2_2:57734530-57734549 | Msa0260200:intron | 35.0% | |
| TAACTAACTCACAGACAAAG+GGG | - | chr2_2:57734531-57734550 | Msa0260200:intron | 35.0% | |
| ATTTGCATCAGCCAAATGAT+AGG | + | chr2_2:57734561-57734580 | None:intergenic | 35.0% | |
| GGGTATTATTCAGTGATTTG+TGG | + | chr2_2:57734740-57734759 | None:intergenic | 35.0% | |
| AAAGGTTACAGTAGAATGCA+GGG | + | chr2_2:57734760-57734779 | None:intergenic | 35.0% | |
| TCTACTGTAACCTTTCTGAA+TGG | - | chr2_2:57734765-57734784 | Msa0260200:CDS | 35.0% | |
| !! | TCAAGTTGAACCATTCAGAA+AGG | + | chr2_2:57734778-57734797 | None:intergenic | 35.0% |
| GATAATTGTACATGCCATGT+AGG | + | chr2_2:57734809-57734828 | None:intergenic | 35.0% | |
| !! | ATCACAAACTTTTGAGGAAG+AGG | + | chr2_2:57735072-57735091 | None:intergenic | 35.0% |
| TTCCTCAAAAGTTTGTGATC+TGG | - | chr2_2:57735073-57735092 | Msa0260200:intron | 35.0% | |
| ! | AACCAGATCACAAACTTTTG+AGG | + | chr2_2:57735078-57735097 | None:intergenic | 35.0% |
| CTTCTTGATTCTGGGTTTAT+TGG | - | chr2_2:57735266-57735285 | Msa0260200:intron | 35.0% | |
| TTACAACGAAGATGCAAACA+AGG | - | chr2_2:57735304-57735323 | Msa0260200:CDS | 35.0% | |
| ! | GCTTTGAACTGTATTCAGAT+AGG | - | chr2_2:57735397-57735416 | Msa0260200:CDS | 35.0% |
| !! | CTTTTATTTACAGGAGACAG+AGG | + | chr2_2:57735487-57735506 | None:intergenic | 35.0% |
| ! | GTTAAATTCTCTGAGGAACT+TGG | + | chr2_2:57735535-57735554 | None:intergenic | 35.0% |
| AACAAGATCTGGTTACTTCA+AGG | - | chr2_2:57735555-57735574 | Msa0260200:intron | 35.0% | |
| ACAAGATCTGGTTACTTCAA+GGG | - | chr2_2:57735556-57735575 | Msa0260200:intron | 35.0% | |
| ACTGTTGTCTATTCTTCATG+GGG | + | chr2_2:57735668-57735687 | None:intergenic | 35.0% | |
| ATTTGAATGCAGAACATGGT+GGG | - | chr2_2:57735706-57735725 | Msa0260200:intron | 35.0% | |
| GAGTGAAGTTCTTAAAGATC+AGG | - | chr2_2:57735762-57735781 | Msa0260200:intron | 35.0% | |
| GCATACAAAACCCAGTATAA+AGG | + | chr2_2:57735798-57735817 | None:intergenic | 35.0% | |
| GATCTTATGGAAATGTGTTC+AGG | - | chr2_2:57735843-57735862 | Msa0260200:intron | 35.0% | |
| ! | TTGTAATTTTTCCTAGGGTG+GGG | - | chr2_2:57735970-57735989 | Msa0260200:intron | 35.0% |
| CATACTTTCTGACATATCCA+TGG | + | chr2_2:57736113-57736132 | None:intergenic | 35.0% | |
| !!! | GACAATTTAGGCGTGTTTTT+TGG | - | chr2_2:57736218-57736237 | Msa0260200:intron | 35.0% |
| !!! | TTAGGCGTGTTTTTTGGATT+TGG | - | chr2_2:57736224-57736243 | Msa0260200:intron | 35.0% |
| TAGTATATAAAGCTCAACCC+AGG | - | chr2_2:57736295-57736314 | Msa0260200:intron | 35.0% | |
| TGCCATTAGAGACTGAAATT+AGG | - | chr2_2:57736356-57736375 | Msa0260200:intron | 35.0% | |
| AAATTAGGAAGATTAAGGGG+AGG | - | chr2_2:57736371-57736390 | Msa0260200:intron | 35.0% | |
| AATTAGGAAGATTAAGGGGA+GGG | - | chr2_2:57736372-57736391 | Msa0260200:intron | 35.0% | |
| AAGGAAAGCTTCATAAGCAA+AGG | + | chr2_2:57736504-57736523 | None:intergenic | 35.0% | |
| TTTGCTTATGAAGCTTTCCT+TGG | - | chr2_2:57736503-57736522 | Msa0260200:intron | 35.0% | |
| ! | ATATATACTTGGTGGAACAG+TGG | + | chr2_2:57736536-57736555 | None:intergenic | 35.0% |
| GGCATTTCATATATACTTGG+TGG | + | chr2_2:57736544-57736563 | None:intergenic | 35.0% | |
| TAGAAATATAATCATGCGGG+GGG | - | chr2_2:57736594-57736613 | Msa0260200:intron | 35.0% | |
| ACAAGATAGTTTCTCCATCT+TGG | - | chr2_2:57736785-57736804 | Msa0260200:intron | 35.0% | |
| CAAGATAGTTTCTCCATCTT+GGG | - | chr2_2:57736786-57736805 | Msa0260200:intron | 35.0% | |
| TGGTGCAGAGTATATTAGAA+AGG | - | chr2_2:57736837-57736856 | Msa0260200:intron | 35.0% | |
| !! | AGGTTGATAAAAGACAAGGA+TGG | + | chr2_2:57736883-57736902 | None:intergenic | 35.0% |
| AGATCCTTGTATGATGATAG+CGG | + | chr2_2:57736913-57736932 | None:intergenic | 35.0% | |
| GCAACATGTACTATTTGAAG+AGG | - | chr2_2:57736933-57736952 | Msa0260200:intron | 35.0% | |
| ! | CCACCTTGTATTTTGTAAGA+TGG | + | chr2_2:57736980-57736999 | None:intergenic | 35.0% |
| CCATCTTACAAAATACAAGG+TGG | - | chr2_2:57736977-57736996 | Msa0260200:CDS | 35.0% | |
| GCCATTTGTTTGTACTTTGT+AGG | - | chr2_2:57737113-57737132 | Msa0260200:intron | 35.0% | |
| CCCTACAAAGTACAAACAAA+TGG | + | chr2_2:57737117-57737136 | None:intergenic | 35.0% | |
| TTGTTTGTACTTTGTAGGGA+TGG | - | chr2_2:57737118-57737137 | Msa0260200:intron | 35.0% | |
| TGTTTGTACTTTGTAGGGAT+GGG | - | chr2_2:57737119-57737138 | Msa0260200:intron | 35.0% | |
| ATACTCAATCAACTTGCACA+AGG | + | chr2_2:57737194-57737213 | None:intergenic | 35.0% | |
| !! | TGTGCAAGTTGATTGAGTAT+TGG | - | chr2_2:57737194-57737213 | Msa0260200:intron | 35.0% |
| CTCTTAAGATACTGACAACA+TGG | + | chr2_2:57737412-57737431 | None:intergenic | 35.0% | |
| CATGTTGTCAGTATCTTAAG+AGG | - | chr2_2:57737410-57737429 | Msa0260200:intron | 35.0% | |
| TTGTCAGTATCTTAAGAGGT+TGG | - | chr2_2:57737414-57737433 | Msa0260200:intron | 35.0% | |
| ACATAGGACATGATAGAAGA+GGG | + | chr2_2:57737546-57737565 | None:intergenic | 35.0% | |
| TACATAGGACATGATAGAAG+AGG | + | chr2_2:57737547-57737566 | None:intergenic | 35.0% | |
| AAGTCAATAGACAGTGAAGA+TGG | + | chr2_2:57737671-57737690 | None:intergenic | 35.0% | |
| ! | ATTGTTATCCTTTTCTGCTC+CGG | + | chr2_2:57737920-57737939 | None:intergenic | 35.0% |
| ! | CGATGCTCAGTGAAATATTT+TGG | - | chr2_2:57738069-57738088 | Msa0260200:five_prime_UTR | 35.0% |
| !! | TGACTTGGCCATTTTATTCT+TGG | - | chr2_2:57738129-57738148 | Msa0260200:five_prime_UTR | 35.0% |
| ATCTCAATGACATTCATGGT+TGG | - | chr2_2:57738169-57738188 | Msa0260200:five_prime_UTR | 35.0% | |
| ! | TGTTTCTGACTAGACAGTTG+AGG | - | chr2_2:57732804-57732823 | Msa0260200:three_prime_UTR | 40.0% |
| TAGACAGTTGAGGTTGAAGA+AGG | - | chr2_2:57732814-57732833 | Msa0260200:three_prime_UTR | 40.0% | |
| CATAATCTCTTCGGTTTCAG+TGG | + | chr2_2:57733010-57733029 | None:intergenic | 40.0% | |
| CACTGAAACCGAAGAGATTA+TGG | - | chr2_2:57733008-57733027 | Msa0260200:CDS | 40.0% | |
| GAGATTATGGGTCTTCTTCT+TGG | - | chr2_2:57733021-57733040 | Msa0260200:CDS | 40.0% | |
| ! | GAGTGTGACTGCATTGATAT+GGG | - | chr2_2:57733187-57733206 | Msa0260200:CDS | 40.0% |
| ! | AGTGTGACTGCATTGATATG+GGG | - | chr2_2:57733188-57733207 | Msa0260200:CDS | 40.0% |
| TCACTTATGAAGCAGAGACA+CGG | - | chr2_2:57733390-57733409 | Msa0260200:intron | 40.0% | |
| TTCTGCAGAGCATATCACTT+AGG | - | chr2_2:57733532-57733551 | Msa0260200:intron | 40.0% | |
| ATTAAACACATGGGCCTGTT+TGG | + | chr2_2:57733770-57733789 | None:intergenic | 40.0% | |
| CACAGAATGACTGTTACAAC+TGG | - | chr2_2:57733891-57733910 | Msa0260200:intron | 40.0% | |
| TTACAACTGGAAGAACAACG+AGG | - | chr2_2:57733904-57733923 | Msa0260200:intron | 40.0% | |
| TACAACTGGAAGAACAACGA+GGG | - | chr2_2:57733905-57733924 | Msa0260200:intron | 40.0% | |
| AAGTACATACCGACATGTGA+AGG | + | chr2_2:57733972-57733991 | None:intergenic | 40.0% | |
| CACATGTCGGTATGTACTTT+CGG | - | chr2_2:57733973-57733992 | Msa0260200:CDS | 40.0% | |
| ACATGTCGGTATGTACTTTC+GGG | - | chr2_2:57733974-57733993 | Msa0260200:CDS | 40.0% | |
| ATATCGAAACAATGGGAGAC+GGG | + | chr2_2:57734003-57734022 | None:intergenic | 40.0% | |
| !!! | TTTTAGAGTGGGAGATAACC+TGG | + | chr2_2:57734438-57734457 | None:intergenic | 40.0% |
| AACTAACTCACAGACAAAGG+GGG | - | chr2_2:57734532-57734551 | Msa0260200:intron | 40.0% | |
| AAAGGGGGTTTCCTATCATT+TGG | - | chr2_2:57734547-57734566 | Msa0260200:intron | 40.0% | |
| GAAAGGTTACAGTAGAATGC+AGG | + | chr2_2:57734761-57734780 | None:intergenic | 40.0% | |
| !! | AGGTTGAAAGGCTTTTTAGC+AGG | - | chr2_2:57734983-57735002 | Msa0260200:intron | 40.0% |
| !! | TGCTTGTTATCACGTTGGAT+AGG | - | chr2_2:57735115-57735134 | Msa0260200:intron | 40.0% |
| AACGAAGATGCAAACAAGGT+TGG | - | chr2_2:57735308-57735327 | Msa0260200:CDS | 40.0% | |
| ATTGCTTTCCAGTCATCTGA+TGG | - | chr2_2:57735433-57735452 | Msa0260200:CDS | 40.0% | |
| ! | TTTACAGGAGACAGAGGTAT+GGG | + | chr2_2:57735481-57735500 | None:intergenic | 40.0% |
| ATTTACAGGAGACAGAGGTA+TGG | + | chr2_2:57735482-57735501 | None:intergenic | 40.0% | |
| CATTTGAATGCAGAACATGG+TGG | - | chr2_2:57735705-57735724 | Msa0260200:intron | 40.0% | |
| ! | TGTAATTTTTCCTAGGGTGG+GGG | - | chr2_2:57735971-57735990 | Msa0260200:intron | 40.0% |
| ! | TTTTACGCTCCCTAGATAGT+TGG | + | chr2_2:57736038-57736057 | None:intergenic | 40.0% |
| ! | TATCTAGGGAGCGTAAAAGA+TGG | - | chr2_2:57736040-57736059 | Msa0260200:intron | 40.0% |
| ! | GGATATGTCAGAAAGTATGC+AGG | - | chr2_2:57736114-57736133 | Msa0260200:intron | 40.0% |
| ACCTCATGTCCATATTTGAG+CGG | + | chr2_2:57736150-57736169 | None:intergenic | 40.0% | |
| TGACCTGGTGATAAATGTCT+GGG | - | chr2_2:57736318-57736337 | Msa0260200:intron | 40.0% | |
| !! | TCATACTGAGGAGCATTCTA+GGG | + | chr2_2:57736473-57736492 | None:intergenic | 40.0% |
| !! | ATCATACTGAGGAGCATTCT+AGG | + | chr2_2:57736474-57736493 | None:intergenic | 40.0% |
| ! | TAACACATATTTGGTGGCAG+TGG | - | chr2_2:57736817-57736836 | Msa0260200:intron | 40.0% |
| ! | CTACATCTAAAGCGCTACAT+AGG | + | chr2_2:57737562-57737581 | None:intergenic | 40.0% |
| GATGAACTTCCTCGATGTAT+GGG | + | chr2_2:57737828-57737847 | None:intergenic | 40.0% | |
| AGATGAACTTCCTCGATGTA+TGG | + | chr2_2:57737829-57737848 | None:intergenic | 40.0% | |
| CAGAGTTCAAGTGAATCTCT+TGG | - | chr2_2:57737867-57737886 | Msa0260200:intron | 40.0% | |
| ! | CAAACTAGCAAATTTTGCGG+AGG | + | chr2_2:57738045-57738064 | None:intergenic | 40.0% |
| TACCTGTGTACAATTGTGAG+TGG | - | chr2_2:57738106-57738125 | Msa0260200:five_prime_UTR | 40.0% | |
| TACAATTGTGAGTGGTGACT+TGG | - | chr2_2:57738114-57738133 | Msa0260200:five_prime_UTR | 40.0% | |
| !! | CTTGGCCATTTTATTCTTGG+AGG | - | chr2_2:57738132-57738151 | Msa0260200:five_prime_UTR | 40.0% |
| ACAGTTGAGGTTGAAGAAGG+AGG | - | chr2_2:57732817-57732836 | Msa0260200:three_prime_UTR | 45.0% | |
| TCTTCTTCTTGGCGATATCC+AGG | - | chr2_2:57733032-57733051 | Msa0260200:CDS | 45.0% | |
| ! | GGAGTGTGACTGCATTGATA+TGG | - | chr2_2:57733186-57733205 | Msa0260200:CDS | 45.0% |
| CACTTATGAAGCAGAGACAC+GGG | - | chr2_2:57733391-57733410 | Msa0260200:intron | 45.0% | |
| ACTTATGAAGCAGAGACACG+GGG | - | chr2_2:57733392-57733411 | Msa0260200:intron | 45.0% | |
| TGGCATGTTGACACAAGTAG+TGG | - | chr2_2:57733423-57733442 | Msa0260200:intron | 45.0% | |
| CATATCACTTAGGCCCTGTT+TGG | - | chr2_2:57733542-57733561 | Msa0260200:intron | 45.0% | |
| GTTCTCACAACTGCTTAAGC+CGG | - | chr2_2:57733721-57733740 | Msa0260200:intron | 45.0% | |
| GGCCCATGTGTTTAATGCAA+TGG | - | chr2_2:57733774-57733793 | Msa0260200:intron | 45.0% | |
| GAAGGCAGGACAGTAATATG+AGG | + | chr2_2:57733954-57733973 | None:intergenic | 45.0% | |
| CGTGCTCGACAGATTTACTT+TGG | + | chr2_2:57734473-57734492 | None:intergenic | 45.0% | |
| !! | GATTTGTGGAGAAGTGTCTG+AGG | + | chr2_2:57734726-57734745 | None:intergenic | 45.0% |
| !! | CAGCATGCTTGTTATCACGT+TGG | - | chr2_2:57735110-57735129 | Msa0260200:intron | 45.0% |
| ! | TTTTGTAGATGTGCGGACTC+AGG | - | chr2_2:57735232-57735251 | Msa0260200:intron | 45.0% |
| TCTGCTTTCCATCAGATGAC+TGG | + | chr2_2:57735444-57735463 | None:intergenic | 45.0% | |
| GAAATGTGTTCAGGCCCTAA+AGG | - | chr2_2:57735852-57735871 | Msa0260200:intron | 45.0% | |
| TACTGGTGGGACATCCTTTA+GGG | + | chr2_2:57735869-57735888 | None:intergenic | 45.0% | |
| ATACTGGTGGGACATCCTTT+AGG | + | chr2_2:57735870-57735889 | None:intergenic | 45.0% | |
| ! | GTAATTTTTCCTAGGGTGGG+GGG | - | chr2_2:57735972-57735991 | Msa0260200:intron | 45.0% |
| AATGCCGATGCCAACTATCT+AGG | - | chr2_2:57736025-57736044 | Msa0260200:intron | 45.0% | |
| ATGCCGATGCCAACTATCTA+GGG | - | chr2_2:57736026-57736045 | Msa0260200:intron | 45.0% | |
| AGCTATGCACCGCTCAAATA+TGG | - | chr2_2:57736138-57736157 | Msa0260200:intron | 45.0% | |
| ACCGCTCAAATATGGACATG+AGG | - | chr2_2:57736146-57736165 | Msa0260200:intron | 45.0% | |
| ATCTTGTCCCCTTGCACAAA+AGG | - | chr2_2:57736251-57736270 | Msa0260200:intron | 45.0% | |
| TCTTGTCCCCTTGCACAAAA+GGG | - | chr2_2:57736252-57736271 | Msa0260200:intron | 45.0% | |
| CATTTATCACCAGGTCACCT+GGG | + | chr2_2:57736315-57736334 | None:intergenic | 45.0% | |
| ACATTTATCACCAGGTCACC+TGG | + | chr2_2:57736316-57736335 | None:intergenic | 45.0% | |
| GTGACCTGGTGATAAATGTC+TGG | - | chr2_2:57736317-57736336 | Msa0260200:intron | 45.0% | |
| CTACCCAGACATTTATCACC+AGG | + | chr2_2:57736324-57736343 | None:intergenic | 45.0% | |
| AAGGCAGCAGAATCATACTG+AGG | + | chr2_2:57736485-57736504 | None:intergenic | 45.0% | |
| AATATAATCATGCGGGGGGA+AGG | - | chr2_2:57736598-57736617 | Msa0260200:intron | 45.0% | |
| !! | ATGATGATAGCGGCGAATCA+AGG | + | chr2_2:57736903-57736922 | None:intergenic | 45.0% |
| TTCGCCGCTATCATCATACA+AGG | - | chr2_2:57736906-57736925 | Msa0260200:intron | 45.0% | |
| ACACCACACTTCGACTTATC+AGG | - | chr2_2:57737165-57737184 | Msa0260200:intron | 45.0% | |
| AAGCCTGATAAGTCGAAGTG+TGG | + | chr2_2:57737171-57737190 | None:intergenic | 45.0% | |
| !! | TCTTGAAGTGCGTTGATTGC+AGG | + | chr2_2:57737318-57737337 | None:intergenic | 45.0% |
| ! | TAAACTTGCTTCACTCCCTC+TGG | + | chr2_2:57737763-57737782 | None:intergenic | 45.0% |
| AGAGGGAGTGAAGCAAGTTT+AGG | - | chr2_2:57737762-57737781 | Msa0260200:intron | 45.0% | |
| TATGGGAGATGCAACTTGAC+GGG | + | chr2_2:57737811-57737830 | None:intergenic | 45.0% | |
| GTATGGGAGATGCAACTTGA+CGG | + | chr2_2:57737812-57737831 | None:intergenic | 45.0% | |
| ! | TCAAAGAGTGTAGCTAGTCC+TGG | - | chr2_2:57737891-57737910 | Msa0260200:CDS | 45.0% |
| CACCACTCACAATTGTACAC+AGG | + | chr2_2:57738111-57738130 | None:intergenic | 45.0% | |
| !! | AAAAAAATAAAGAAAAAATT+GGG | + | chr2_2:57733069-57733088 | None:intergenic | 5.0% |
| ! | CGTCGATCAGACCTTGTTTG+AGG | + | chr2_2:57733221-57733240 | None:intergenic | 50.0% |
| TCACAACTGCTTAAGCCGGT+AGG | - | chr2_2:57733725-57733744 | Msa0260200:intron | 50.0% | |
| ACACATGGGCCTGTTTGGAT+TGG | + | chr2_2:57733765-57733784 | None:intergenic | 50.0% | |
| GGAAGAACAACGAGGGTGAT+AGG | - | chr2_2:57733912-57733931 | Msa0260200:intron | 50.0% | |
| ACTGTCCTGCCTTCACATGT+CGG | - | chr2_2:57733960-57733979 | Msa0260200:CDS | 50.0% | |
| ACATACCGACATGTGAAGGC+AGG | + | chr2_2:57733968-57733987 | None:intergenic | 50.0% | |
| ACTTGAGCACATGCCCTACA+TGG | - | chr2_2:57734792-57734811 | Msa0260200:CDS | 50.0% | |
| AATCACCAGTGTCCTGCTCT+GGG | + | chr2_2:57735588-57735607 | None:intergenic | 50.0% | |
| ! | ACTGGTGATTCGAGAAGTGC+TGG | - | chr2_2:57735598-57735617 | Msa0260200:intron | 50.0% |
| !! | GAGAAGTGCTGGTGCTAGTA+AGG | - | chr2_2:57735609-57735628 | Msa0260200:CDS | 50.0% |
| TGGGGGGAGATCTTCAGAAT+TGG | - | chr2_2:57735988-57736007 | Msa0260200:intron | 50.0% | |
| GGGGGGAGATCTTCAGAATT+GGG | - | chr2_2:57735989-57736008 | Msa0260200:intron | 50.0% | |
| GGGGGAGATCTTCAGAATTG+GGG | - | chr2_2:57735990-57736009 | Msa0260200:intron | 50.0% | |
| GCTCCCTAGATAGTTGGCAT+CGG | + | chr2_2:57736032-57736051 | None:intergenic | 50.0% | |
| !! | CATCGCAGTTGATGATCCCA+TGG | - | chr2_2:57736093-57736112 | Msa0260200:intron | 50.0% |
| ! | TGTGCTCCCTTTTGTGCAAG+GGG | + | chr2_2:57736261-57736280 | None:intergenic | 50.0% |
| ! | CTGTGCTCCCTTTTGTGCAA+GGG | + | chr2_2:57736262-57736281 | None:intergenic | 50.0% |
| ! | ACTGTGCTCCCTTTTGTGCA+AGG | + | chr2_2:57736263-57736282 | None:intergenic | 50.0% |
| ! | TTGCACAAAAGGGAGCACAG+TGG | - | chr2_2:57736262-57736281 | Msa0260200:intron | 50.0% |
| AAGGATGGCAGCACATGAAG+GGG | + | chr2_2:57736868-57736887 | None:intergenic | 50.0% | |
| CAAGGATGGCAGCACATGAA+GGG | + | chr2_2:57736869-57736888 | None:intergenic | 50.0% | |
| ACAAGGATGGCAGCACATGA+AGG | + | chr2_2:57736870-57736889 | None:intergenic | 50.0% | |
| GTGTGGTGTATGAAAGCGAG+TGG | + | chr2_2:57737154-57737173 | None:intergenic | 50.0% | |
| GAGTGAAGAAGCCAAGAGTC+TGG | - | chr2_2:57737719-57737738 | Msa0260200:CDS | 50.0% | |
| TGAAGAAGCCAAGAGTCTGG+AGG | - | chr2_2:57737722-57737741 | Msa0260200:CDS | 50.0% | |
| ATGGGAGATGCAACTTGACG+GGG | + | chr2_2:57737810-57737829 | None:intergenic | 50.0% | |
| GTTGCATCTCCCATACATCG+AGG | - | chr2_2:57737816-57737835 | Msa0260200:intron | 50.0% | |
| CTCTGCGAGTTTCTTTGACG+AGG | + | chr2_2:57737852-57737871 | None:intergenic | 50.0% | |
| AGGTTGAAGAAGGAGGCGAG+AGG | - | chr2_2:57732824-57732843 | Msa0260200:three_prime_UTR | 55.0% | |
| GGTTGAAGAAGGAGGCGAGA+GGG | - | chr2_2:57732825-57732844 | Msa0260200:three_prime_UTR | 55.0% | |
| GGGGTGCATCTCCTCAAACA+AGG | - | chr2_2:57733207-57733226 | Msa0260200:intron | 55.0% | |
| GAAGCAGCAGCCAACTGTTC+AGG | + | chr2_2:57733266-57733285 | None:intergenic | 55.0% | |
| CAACACGTGTCTAACACCGC+AGG | + | chr2_2:57733481-57733500 | None:intergenic | 55.0% | |
| ! | CTGCGGTGTTAGACACGTGT+TGG | - | chr2_2:57733479-57733498 | Msa0260200:intron | 55.0% |
| GAACAACGAGGGTGATAGGC+TGG | - | chr2_2:57733916-57733935 | Msa0260200:intron | 55.0% | |
| GAATCACCAGTGTCCTGCTC+TGG | + | chr2_2:57735589-57735608 | None:intergenic | 55.0% | |
| AAAGCTCAACCCAGGTGACC+TGG | - | chr2_2:57736303-57736322 | Msa0260200:intron | 55.0% | |
| GGAACAGTGGAACTGTGCCA+AGG | + | chr2_2:57736523-57736542 | None:intergenic | 55.0% | |
| AGAAGCCAAGAGTCTGGAGG+CGG | - | chr2_2:57737725-57737744 | Msa0260200:CDS | 55.0% | |
| ACGGGGAGAAGCAACTAGAC+GGG | + | chr2_2:57737793-57737812 | None:intergenic | 55.0% | |
| GACGGGGAGAAGCAACTAGA+CGG | + | chr2_2:57737794-57737813 | None:intergenic | 55.0% | |
| GTGTAGCTAGTCCTGGTAGC+CGG | - | chr2_2:57737898-57737917 | Msa0260200:CDS | 55.0% | |
| CAAGGGAGATAGCCCAGAGC+AGG | - | chr2_2:57735573-57735592 | Msa0260200:intron | 60.0% | |
| GATAGCCCAGAGCAGGACAC+TGG | - | chr2_2:57735580-57735599 | Msa0260200:intron | 60.0% | |
| TGAAGATCTCCCCCCACCCT+AGG | + | chr2_2:57735984-57736003 | None:intergenic | 60.0% | |
| !! | TGCGGGGGGAAGGTATTGTG+TGG | - | chr2_2:57736608-57736627 | Msa0260200:intron | 60.0% |
| !! | CGGAGGCATCTACGTCCAGA+GGG | - | chr2_2:57737745-57737764 | Msa0260200:intron | 60.0% |
| CGGGGAGAAGCAACTAGACG+GGG | + | chr2_2:57737792-57737811 | None:intergenic | 60.0% | |
| ! | CCTTTTCTGCTCCGGCTACC+AGG | + | chr2_2:57737912-57737931 | None:intergenic | 60.0% |
| CCTGGTAGCCGGAGCAGAAA+AGG | - | chr2_2:57737909-57737928 | Msa0260200:CDS | 60.0% | |
| AGAGACACGGGGCACGACAC+TGG | - | chr2_2:57733403-57733422 | Msa0260200:intron | 65.0% | |
| AGCCAAGAGTCTGGAGGCGG+AGG | - | chr2_2:57737728-57737747 | Msa0260200:CDS | 65.0% | |
| TGCCTCCGCCTCCAGACTCT+TGG | + | chr2_2:57737733-57737752 | None:intergenic | 65.0% | |
| !! | GCGGAGGCATCTACGTCCAG+AGG | - | chr2_2:57737744-57737763 | Msa0260200:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 57732701 | 57738229 | 57732701 | ID=Msa0260200;Name=Msa0260200 |
| chr2_2 | mRNA | 57732701 | 57738229 | 57732701 | ID=Msa0260200-mRNA-1;Parent=Msa0260200;Name=Msa0260200-mRNA-1;_AED=0.15;_eAED=0.15;_QI=242|0.75|0.77|1|0.75|0.77|9|294|406 |
| chr2_2 | exon | 57732701 | 57733222 | 57732701 | ID=Msa0260200-mRNA-1:exon:17598;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57733568 | 57733622 | 57733568 | ID=Msa0260200-mRNA-1:exon:17597;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57733935 | 57734093 | 57733935 | ID=Msa0260200-mRNA-1:exon:17596;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57734763 | 57734944 | 57734763 | ID=Msa0260200-mRNA-1:exon:17595;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57735300 | 57735515 | 57735300 | ID=Msa0260200-mRNA-1:exon:17594;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57735605 | 57735690 | 57735605 | ID=Msa0260200-mRNA-1:exon:17593;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57736949 | 57737034 | 57736949 | ID=Msa0260200-mRNA-1:exon:17592;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57737660 | 57737757 | 57737660 | ID=Msa0260200-mRNA-1:exon:17591;Parent=Msa0260200-mRNA-1 |
| chr2_2 | exon | 57737877 | 57738229 | 57737877 | ID=Msa0260200-mRNA-1:exon:17590;Parent=Msa0260200-mRNA-1 |
| chr2_2 | five_prime_UTR | 57737988 | 57738229 | 57737988 | ID=Msa0260200-mRNA-1:five_prime_utr;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57737877 | 57737987 | 57737877 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57737660 | 57737757 | 57737660 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57736949 | 57737034 | 57736949 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57735605 | 57735690 | 57735605 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57735300 | 57735515 | 57735300 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57734763 | 57734944 | 57734763 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57733935 | 57734093 | 57733935 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57733568 | 57733622 | 57733568 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | CDS | 57732995 | 57733222 | 57732995 | ID=Msa0260200-mRNA-1:cds;Parent=Msa0260200-mRNA-1 |
| chr2_2 | three_prime_UTR | 57732701 | 57732994 | 57732701 | ID=Msa0260200-mRNA-1:three_prime_utr;Parent=Msa0260200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
