AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0306950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306950 MtrunA17_Chr1g0205611 97.196 856 24 0 1 856 1 856 0.0 1738
Msa0306950 MtrunA17_Chr7g0272791 64.042 851 296 6 9 856 24 867 0.0 1159
Msa0306950 MtrunA17_Chr1g0191921 63.498 852 301 6 6 856 16 858 0.0 1134
Msa0306950 MtrunA17_Chr8g0342881 57.901 867 328 10 8 856 9 856 0.0 1030
Msa0306950 MtrunA17_Chr2g0329901 56.865 874 338 10 3 856 9 863 0.0 1020
Msa0306950 MtrunA17_Chr2g0329911 56.552 870 345 10 3 856 9 861 0.0 1016
Msa0306950 MtrunA17_Chr8g0343021 56.343 875 338 10 7 856 9 864 0.0 998
Msa0306950 MtrunA17_Chr8g0343031 55.923 878 343 10 4 856 7 865 0.0 989
Msa0306950 MtrunA17_Chr8g0344211 54.639 873 356 9 7 856 13 868 0.0 988
Msa0306950 MtrunA17_Chr8g0342951 56.014 873 344 9 7 856 13 868 0.0 987
Msa0306950 MtrunA17_Chr8g0342971 55.251 876 348 12 7 856 13 870 0.0 986
Msa0306950 MtrunA17_Chr8g0342891 54.776 869 357 9 7 856 10 861 0.0 982
Msa0306950 MtrunA17_Chr5g0406871 55.669 882 346 15 1 856 5 867 0.0 979
Msa0306950 MtrunA17_Chr3g0120071 54.954 868 357 9 6 856 8 858 0.0 979
Msa0306950 MtrunA17_Chr8g0343011 54.732 877 354 10 3 856 9 865 0.0 976
Msa0306950 MtrunA17_Chr8g0342921 53.943 875 360 11 7 856 13 869 0.0 962
Msa0306950 MtrunA17_Chr8g0342931 58.191 763 303 6 97 856 1 750 0.0 938
Msa0306950 MtrunA17_Chr8g0342901 51.890 873 343 12 7 856 10 828 0.0 907
Msa0306950 MtrunA17_Chr8g0343001 48.495 864 375 13 3 856 4 807 0.0 836
Msa0306950 MtrunA17_Chr8g0342991 48.786 865 371 16 3 856 4 807 0.0 834
Msa0306950 MtrunA17_Chr8g0342981 50.482 830 358 14 39 856 35 823 0.0 806
Msa0306950 MtrunA17_Chr8g0344201 44.691 857 457 12 2 855 84 926 0.0 723
Msa0306950 MtrunA17_Chr8g0338451 42.350 817 447 12 30 834 46 850 0.0 689
Msa0306950 MtrunA17_Chr3g0118651 45.536 784 399 12 83 856 138 903 0.0 687
Msa0306950 MtrunA17_Chr8g0377101 42.326 860 454 19 13 856 83 916 0.0 681
Msa0306950 MtrunA17_Chr3g0118641 43.394 825 437 14 39 856 101 902 0.0 669
Msa0306950 MtrunA17_Chr3g0118621 43.489 837 436 15 31 856 55 865 0.0 642
Msa0306950 MtrunA17_Chr4g0033171 45.961 718 366 12 146 856 23 725 0.0 640
Msa0306950 MtrunA17_Chr4g0047281 40.967 786 411 15 79 855 153 894 0.0 615
Msa0306950 MtrunA17_Chr8g0344241 60.500 400 152 2 458 856 67 461 8.70e-177 518
Msa0306950 MtrunA17_Chr6g0471951 41.847 509 254 5 310 814 12 482 2.29e-143 432
Msa0306950 MtrunA17_Chr7g0218231 57.983 119 49 1 504 621 14 132 4.92e-40 144
Msa0306950 MtrunA17_Chr6g0468081 52.809 89 41 1 534 621 1 89 3.77e-23 94.7
Msa0306950 MtrunA17_Chr2g0277191 63.333 60 21 1 725 784 58 116 9.37e-19 82.8
Msa0306950 MtrunA17_Chr7g0272781 59.322 59 24 0 747 805 11 69 2.50e-17 77.8
Msa0306950 MtrunA17_Chr3g0137991 39.695 131 55 3 728 856 1 109 6.83e-17 77.4
Msa0306950 MtrunA17_Chr4g0047271 35.417 96 56 2 761 855 1 91 1.96e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306950 AT3G22400.1 68.360 866 262 6 1 856 23 886 0.0 1270
Msa0306950 AT1G55020.1 62.559 852 306 7 7 856 19 859 0.0 1125
Msa0306950 AT1G17420.1 43.677 854 461 14 6 856 83 919 0.0 706
Msa0306950 AT1G72520.1 43.743 855 460 15 6 856 89 926 0.0 705
Msa0306950 AT3G45140.1 43.483 844 423 19 28 856 92 896 0.0 665
Msa0306950 AT3G45140.2 45.560 777 383 16 95 856 3 754 0.0 660
Msa0306950 AT1G67560.1 40.651 829 460 15 38 856 111 917 0.0 623

Find 223 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTTGGATGGAACTATTT+TGG 0.167923 2_3:+66278229 None:intergenic
CCAATACCTCTGATTATTCT+AGG 0.186631 2_3:-66276560 Msa0306950:CDS
CTGTTGATGGATTGGAAATA+TGG 0.195211 2_3:-66277190 Msa0306950:CDS
GCAGAGTTCAATTCTAAATA+AGG 0.214356 2_3:-66282970 Msa0306950:intron
AATCATGCACCATTATTATA+TGG 0.217985 2_3:-66276992 Msa0306950:CDS
CTGTTTGTAGCTATTATAAA+TGG 0.235592 2_3:+66277636 None:intergenic
TATTGCCTTTGCATATTCTA+AGG 0.236092 2_3:+66276049 None:intergenic
TCAGCATCTGAAGTCCAATT+AGG 0.244666 2_3:+66276714 None:intergenic
GCTCAGTTCCAAACTCTTCT+AGG 0.263267 2_3:-66276804 Msa0306950:CDS
CCGTTTCTGTTCTTCAAACT+TGG 0.266615 2_3:+66276615 None:intergenic
GACAGACAGTAAACCCTAAT+TGG 0.268268 2_3:-66276728 Msa0306950:CDS
AAGCTGGACCCAAGTGTTTA+TGG 0.279198 2_3:-66278255 Msa0306950:CDS
AATGAGCTTGGACTAATTAA+AGG 0.279930 2_3:+66276151 None:intergenic
TTACTGTCTTGAGGTAAAAT+TGG 0.280689 2_3:+66281940 None:intergenic
GAACATAAATGTTTAGATTC+AGG 0.281536 2_3:+66278987 None:intergenic
CACATAGAAAATAGTTTAGA+TGG 0.286202 2_3:-66278204 Msa0306950:CDS
TGAGGGTCATGGCGACTTAA+AGG 0.288673 2_3:-66277060 Msa0306950:CDS
TTGCTATTGCTAACCTGTTT+TGG 0.294946 2_3:+66279109 None:intergenic
AATGTCTAATTTGCAAGAAA+TGG 0.311515 2_3:+66275994 None:intergenic
GATTATGCACGTCCTGTTAT+TGG 0.313044 2_3:-66279185 Msa0306950:CDS
AACACTTGGGTCCAGCTTGC+TGG 0.325774 2_3:+66278260 None:intergenic
TAGCAAGAATTCGAAGATAA+TGG 0.332881 2_3:+66276487 None:intergenic
TGACACCAAAGCAAAGTCTT+TGG 0.333137 2_3:+66276455 None:intergenic
TTCTATGTGCTTTGCTTGGA+TGG 0.334407 2_3:+66278218 None:intergenic
AATTCTCAGTTACATTTGAT+TGG 0.335825 2_3:-66282019 Msa0306950:CDS
TTGAAGTAGTGTTTAGGTAT+TGG 0.337605 2_3:-66282773 Msa0306950:intron
CATGAGAAGATGGGAGTTCC+AGG 0.339136 2_3:-66281993 Msa0306950:CDS
GCTCTTGAAGCCACATTTCA+AGG 0.348885 2_3:-66277583 Msa0306950:CDS
CCTAGAATAATCAGAGGTAT+TGG 0.352991 2_3:+66276560 None:intergenic
CAGCATCTGAAGTCCAATTA+GGG 0.353906 2_3:+66276715 None:intergenic
ACAAAGGCAAAGGTGATAAA+AGG 0.368332 2_3:-66276021 Msa0306950:three_prime_UTR
TGAAGACGGCGAATGATAAC+AGG 0.375986 2_3:+66278522 None:intergenic
CTCAACTTGCGCAGTGGCTC+CGG 0.379170 2_3:+66279320 None:intergenic
CTAGAATAATCAGAGGTATT+GGG 0.380845 2_3:+66276561 None:intergenic
TCGACTGAAGAGGTTTATCT+TGG 0.381313 2_3:-66276750 Msa0306950:CDS
TGCCATCATCTTGTAGAAAC+AGG 0.386367 2_3:+66277936 None:intergenic
AGAGAACTTGTTAGGAATGA+TGG 0.388843 2_3:-66278740 Msa0306950:CDS
TCCAATCCATCAACAGCAAA+AGG 0.389933 2_3:+66277197 None:intergenic
TTGGGAAACAGAAGGGTATA+AGG 0.391897 2_3:+66276579 None:intergenic
AGTGTTACTGCTCCTGATCC+AGG 0.395801 2_3:-66282586 Msa0306950:intron
TATGCTGCTGTGAATGATTC+AGG 0.400868 2_3:-66277785 Msa0306950:CDS
TTTAATGAAGAAAAGCTTGT+TGG 0.401300 2_3:-66282686 Msa0306950:CDS
TGAATGTACCCACATATGTT+TGG 0.402093 2_3:+66276374 None:intergenic
ATAACAGGACGTGCATAATC+TGG 0.402270 2_3:+66279188 None:intergenic
CTTTAGATTGAAGGTGTGTT+TGG 0.404273 2_3:-66276410 Msa0306950:three_prime_UTR
TCAATTCTAGTCTTCATTTG+TGG 0.405339 2_3:+66277023 None:intergenic
ATGACACACCTAGAAGAGTT+TGG 0.408602 2_3:+66276796 None:intergenic
CCCTCCGTGGTAAAGGGATT+GGG 0.410795 2_3:-66279280 Msa0306950:CDS
GTTCCAAGAGATGAACAGTT+TGG 0.412030 2_3:-66278968 Msa0306950:CDS
GTTCTTCCTCGACGTGGATA+AGG 0.412854 2_3:+66279146 None:intergenic
GAGTTGCAAACAAAAGTTAC+AGG 0.414236 2_3:+66281891 None:intergenic
TTTCATGCAGCTGTGAACTT+TGG 0.414934 2_3:-66276957 Msa0306950:CDS
ACCCTCCGTGGTAAAGGGAT+TGG 0.422875 2_3:-66279281 Msa0306950:CDS
TGGAGGACTGATGAAGAGTT+TGG 0.423106 2_3:-66278570 Msa0306950:CDS
CCATGAGGGCTATTTGAATC+TGG 0.424740 2_3:+66277245 None:intergenic
CGTTTCTGTTCTTCAAACTT+GGG 0.424883 2_3:+66276616 None:intergenic
GAGTTTATTCTACTTATGTA+TGG 0.426359 2_3:+66277992 None:intergenic
ATTCTCAGTTACATTTGATT+GGG 0.426750 2_3:-66282018 Msa0306950:CDS
CTTGCTACCCTCCGTGGTAA+AGG 0.427794 2_3:-66279287 Msa0306950:CDS
TTTGGAAGAGAAATGCTTGC+TGG 0.431144 2_3:-66278552 Msa0306950:CDS
GCATAATCTGGACCATCATC+TGG 0.433208 2_3:+66279200 None:intergenic
TGACCAAACTGTTCATCTCT+TGG 0.434284 2_3:+66278965 None:intergenic
CATAAATATCAAGTACATCT+TGG 0.438116 2_3:+66278834 None:intergenic
TTGCTACCCTCCGTGGTAAA+GGG 0.442904 2_3:-66279286 Msa0306950:CDS
TTCGGTAGGTAACCTGCATA+AGG 0.443904 2_3:+66276927 None:intergenic
AGTCGTCCACATACCAAAAC+AGG 0.445120 2_3:-66279122 Msa0306950:intron
AGAAGCCACCCATATAATAA+TGG 0.446648 2_3:+66276983 None:intergenic
TTCACTCAAATCCGTCGCTC+AGG 0.447395 2_3:-66278915 Msa0306950:CDS
TCAAACCAAAGACTTTGCTT+TGG 0.447658 2_3:-66276460 Msa0306950:three_prime_UTR
CGACTAACCGTTGGACGATT+CGG 0.451442 2_3:+66276909 None:intergenic
TCTAGGGAGGGTGGACTCAC+TGG 0.452810 2_3:-66276543 Msa0306950:CDS
TCACTGACACTTTAGATTGA+AGG 0.453061 2_3:-66276419 Msa0306950:three_prime_UTR
ACATGGAAAAGTGGCATGCT+TGG 0.457740 2_3:-66282090 Msa0306950:CDS
GTCAAAGTTTAGAGGGAATG+AGG 0.457958 2_3:+66275967 None:intergenic
GAACGTTTGATTTGATGTCA+TGG 0.461854 2_3:+66282659 None:intergenic
GATGTACTTGATATTTATGA+AGG 0.463379 2_3:-66278830 Msa0306950:CDS
TGATTGGGACCATGAGAAGA+TGG 0.463686 2_3:-66282003 Msa0306950:CDS
GAAAGTATTACGAATGAGCT+TGG 0.464361 2_3:+66276139 None:intergenic
TACTCTGGTGTACCTTGCTC+AGG 0.466421 2_3:+66276876 None:intergenic
GGCTTCAAGAGCTTATGAAT+TGG 0.467742 2_3:+66277594 None:intergenic
CGTGTCCTGGAATGTCATCT+AGG 0.470457 2_3:+66281916 None:intergenic
ATCATGCACCATTATTATAT+GGG 0.471863 2_3:-66276991 Msa0306950:CDS
TTTCCCTGGTAAATTTGCAT+TGG 0.472021 2_3:-66277490 Msa0306950:CDS
CAAGTTTGAAGAACAGAAAC+GGG 0.472398 2_3:-66276614 Msa0306950:CDS
TTTCTGATTATGAAAGCTCC+TGG 0.475739 2_3:+66281975 None:intergenic
ATTTCCAATGCAAATTTACC+AGG 0.477720 2_3:+66277486 None:intergenic
CTTGGGTCCAGCTTGCTGGC+AGG 0.483218 2_3:+66278264 None:intergenic
GGAGGGTGGACTCACTGGTA+AGG 0.484597 2_3:-66276538 Msa0306950:CDS
GACTTCAGATGCTGAACCAT+TGG 0.484611 2_3:-66276706 Msa0306950:CDS
TTGGAAGAGAAATGCTTGCT+GGG 0.486947 2_3:-66278551 Msa0306950:CDS
CTGGAACTCCCATCTTCTCA+TGG 0.491351 2_3:+66281994 None:intergenic
GTAACCCTAGATGACATTCC+AGG 0.492472 2_3:-66281921 Msa0306950:CDS
ATTGAAGGTGTGTTTGGTGT+TGG 0.496968 2_3:-66276404 Msa0306950:three_prime_UTR
TGTTGATGGATTGGAAATAT+GGG 0.500247 2_3:-66277189 Msa0306950:CDS
TACCTCTTGAGCAGATTAGC+AGG 0.501513 2_3:+66277417 None:intergenic
CTATGCATGCTACAATGACT+TGG 0.502290 2_3:-66279228 Msa0306950:CDS
ATTTCCTCCTGCCAGCAAGC+TGG 0.504571 2_3:-66278271 Msa0306950:CDS
AAAGTTACAGGACCGTGTCC+TGG 0.504639 2_3:+66281903 None:intergenic
GTACGTAACAAGAAGAATCA+TGG 0.508161 2_3:-66282746 Msa0306950:exon
TATATACCTTTGATCACGTC+AGG 0.508817 2_3:+66278692 None:intergenic
AGGCATACACTTATCAATGC+TGG 0.509065 2_3:-66277534 Msa0306950:CDS
TTACTATGCAAAGGTCCACT+TGG 0.509317 2_3:+66278794 None:intergenic
TTGAGAATAACATCATGAAA+AGG 0.509337 2_3:-66276647 Msa0306950:CDS
TGTTCTAGTGGCATAAGTCT+TGG 0.510087 2_3:+66277961 None:intergenic
GAGGGTGGACTCACTGGTAA+GGG 0.511057 2_3:-66276537 Msa0306950:CDS
TATGGGATGCAATTGAAACT+TGG 0.511065 2_3:-66277172 Msa0306950:CDS
CCAAGTTTGAAGAACAGAAA+CGG 0.512118 2_3:-66276615 Msa0306950:CDS
CCTTTGATCACGTCAGGCAC+AGG 0.514728 2_3:+66278698 None:intergenic
TGTTGTTCGCCTTGTGGATG+AGG 0.514909 2_3:+66277881 None:intergenic
TCATTCATACACTCTAGTCT+TGG 0.515436 2_3:+66276217 None:intergenic
TTTGGACAATACCCTTATGC+AGG 0.516651 2_3:-66276939 Msa0306950:CDS
TGGAGGGTCATAATGTCATA+TGG 0.519668 2_3:+66282995 None:intergenic
CAATACCTCTGATTATTCTA+GGG 0.520220 2_3:-66276559 Msa0306950:CDS
AGTTTATTCACTATTGAGTA+CGG 0.521434 2_3:+66276287 None:intergenic
GCTGCTACTCCTTCATGTGA+TGG 0.522089 2_3:+66277833 None:intergenic
CCAGATTCAAATAGCCCTCA+TGG 0.529426 2_3:-66277245 Msa0306950:CDS
TCATGTGTGTAACGATGAGT+AGG 0.529926 2_3:+66281858 None:intergenic
TATTAGCAAAGGGACTGAAA+GGG 0.531953 2_3:-66282115 Msa0306950:intron
TCACACAGAGATCTAAGCTC+TGG 0.533691 2_3:+66278884 None:intergenic
GTTTCAGATGGATATGCTGT+TGG 0.534874 2_3:+66276509 None:intergenic
AGCAGCCACCGTGTGGCAGT+TGG 0.535364 2_3:-66277816 Msa0306950:CDS
TTATTAGCAAAGGGACTGAA+AGG 0.535796 2_3:-66282116 Msa0306950:intron
GACTCAAGCTCTTCATACTC+TGG 0.539130 2_3:+66276861 None:intergenic
ATGACTATGAACTCCAACTC+TGG 0.543976 2_3:-66277100 Msa0306950:CDS
GGACACGATCCAAACATATG+TGG 0.546695 2_3:-66276383 Msa0306950:three_prime_UTR
TGATGGCACATTGAAGCCAC+TGG 0.547462 2_3:-66277921 Msa0306950:CDS
CCAATCCATCAACAGCAAAA+GGG 0.547802 2_3:+66277198 None:intergenic
CCCAATCCCTTTACCACGGA+GGG 0.549341 2_3:+66279280 None:intergenic
TACTATGCAAAGGTCCACTT+GGG 0.549633 2_3:+66278795 None:intergenic
TTTAGAATTGAACTCTGCAG+TGG 0.550510 2_3:+66282975 None:intergenic
AGTGGCATAAGTCTTGGTGT+TGG 0.551056 2_3:+66277967 None:intergenic
GGACTTCTTTCCACCAGAGT+TGG 0.552594 2_3:+66277087 None:intergenic
ACATAGAAAATAGTTTAGAT+GGG 0.552780 2_3:-66278203 Msa0306950:CDS
AGGGTATAAGGCAATTTCAC+TGG 0.553038 2_3:+66276591 None:intergenic
TATGCACGTCCTGTTATTGG+TGG 0.553422 2_3:-66279182 Msa0306950:CDS
CTCCTGTTTCTACAAGATGA+TGG 0.553973 2_3:-66277938 Msa0306950:CDS
TCGAAGATAATGGTTTCAGA+TGG 0.555854 2_3:+66276497 None:intergenic
ATCATCAACTAGTTAGCCAT+TGG 0.556688 2_3:-66277760 Msa0306950:intron
GATTGGGACCATGAGAAGAT+GGG 0.557762 2_3:-66282002 Msa0306950:CDS
GAATTGAACTCTGCAGTGGA+GGG 0.560537 2_3:+66282979 None:intergenic
GTAGTGTTTAGGTATTGGCT+TGG 0.560740 2_3:-66282768 Msa0306950:intron
GAAAGGGAAACATGGAAAAG+TGG 0.561186 2_3:-66282099 Msa0306950:CDS
TTTCAGATGGATATGCTGTT+GGG 0.562946 2_3:+66276510 None:intergenic
AAGTGGCATGCTTGGAGAGG+TGG 0.564306 2_3:-66282082 Msa0306950:CDS
AGAATTGAACTCTGCAGTGG+AGG 0.564548 2_3:+66282978 None:intergenic
CAGAGGTATTGGGAAACAGA+AGG 0.564989 2_3:+66276571 None:intergenic
GTCTAGGCATTCGACTGAAG+AGG 0.565700 2_3:-66276760 Msa0306950:CDS
GCTCCATGTTGTTCGCCTTG+TGG 0.566016 2_3:+66277875 None:intergenic
CATTGATAGAAGTTCTGTCT+AGG 0.566059 2_3:-66276776 Msa0306950:CDS
GACTTGGGAACTCCAGATGA+TGG 0.568774 2_3:-66279212 Msa0306950:CDS
TCGGTAGGTAACCTGCATAA+GGG 0.571259 2_3:+66276928 None:intergenic
GATTGGGAAACTTAATGAGT+GGG 0.571518 2_3:-66279264 Msa0306950:CDS
CGTCAGGCACAGGGAATCTG+AGG 0.571634 2_3:+66278708 None:intergenic
TGGAAAGAAGTCCGCAATGA+GGG 0.572321 2_3:-66277077 Msa0306950:CDS
ATGGGATGCAATTGAAACTT+GGG 0.572488 2_3:-66277171 Msa0306950:CDS
TTTGGTCTCCATAAACACTT+GGG 0.572547 2_3:+66278247 None:intergenic
ACCTCTGATTATTCTAGGGA+GGG 0.573596 2_3:-66276555 Msa0306950:CDS
CCTGTGCCTGACGTGATCAA+AGG 0.574820 2_3:-66278698 Msa0306950:intron
GATAAGTGTATGCCTAGCTA+AGG 0.581024 2_3:+66277542 None:intergenic
TGCATATAAATGCCTTAGCT+AGG 0.583152 2_3:-66277554 Msa0306950:CDS
CATCTAGGGTTACTGTCTTG+AGG 0.585735 2_3:+66281931 None:intergenic
ATGCACCATTATTATATGGG+TGG 0.585985 2_3:-66276988 Msa0306950:CDS
CATCCACAAGGCGAACAACA+TGG 0.587970 2_3:-66277878 Msa0306950:CDS
TTGTAGCTAGTAAGACTGCA+TGG 0.588566 2_3:-66278590 Msa0306950:intron
ATCGTCCAACGGTTAGTCGT+AGG 0.588734 2_3:-66276905 Msa0306950:CDS
AGAGGTATTGGGAAACAGAA+GGG 0.589597 2_3:+66276572 None:intergenic
TACCTCTGATTATTCTAGGG+AGG 0.589828 2_3:-66276556 Msa0306950:CDS
GTGTCCTGGAATGTCATCTA+GGG 0.589851 2_3:+66281917 None:intergenic
GGGTCCAGCTTGCTGGCAGG+AGG 0.590471 2_3:+66278267 None:intergenic
TATGCAAAGGTCCACTTGGG+AGG 0.595917 2_3:+66278798 None:intergenic
GAAGTCCGCAATGAGGGTCA+TGG 0.598469 2_3:-66277071 Msa0306950:CDS
ACTATGAACTCCAACTCTGG+TGG 0.599037 2_3:-66277097 Msa0306950:CDS
TCTTGAGGTAAAATTGGCTA+TGG 0.600403 2_3:+66281946 None:intergenic
GACACGATCCAAACATATGT+GGG 0.600902 2_3:-66276382 Msa0306950:three_prime_UTR
AAGGGACTGAAAGGGAAACA+TGG 0.601203 2_3:-66282107 Msa0306950:CDS
CGCTTTAGCCAACTGCCACA+CGG 0.602659 2_3:+66277808 None:intergenic
TAGAAACAGGAGTGTTCTAG+TGG 0.602943 2_3:+66277949 None:intergenic
TACCTGCTAATCTGCTCAAG+AGG 0.604331 2_3:-66277419 Msa0306950:intron
TCTTCTCTCAACTTGCGCAG+TGG 0.608433 2_3:+66279314 None:intergenic
CAAAGGCAATACAAGAACAA+AGG 0.612227 2_3:-66276037 Msa0306950:three_prime_UTR
CGTAGGTTTATGCCTGAGCA+AGG 0.621400 2_3:-66276888 Msa0306950:CDS
TCTGATTATTCTAGGGAGGG+TGG 0.621847 2_3:-66276552 Msa0306950:CDS
CTATGGGAATAAAAGAGCAA+AGG 0.622435 2_3:-66276097 Msa0306950:three_prime_UTR
AGATGGGCTTACAATAGATG+AGG 0.622636 2_3:-66278187 Msa0306950:intron
AATCGCTTGAATGCTGCCAA+TGG 0.623292 2_3:+66276690 None:intergenic
TGGAAGCAAAACCTGAGCGA+CGG 0.624168 2_3:+66278904 None:intergenic
TTTCCAATGCAAATTTACCA+GGG 0.625740 2_3:+66277487 None:intergenic
TATGCATGCTACAATGACTT+GGG 0.625848 2_3:-66279227 Msa0306950:CDS
CTTTGATCACGTCAGGCACA+GGG 0.626045 2_3:+66278699 None:intergenic
AAAATCCTTAGAATATGCAA+AGG 0.628506 2_3:-66276054 Msa0306950:three_prime_UTR
GCGACTTAAAGGATAGGTCA+TGG 0.629220 2_3:-66277049 Msa0306950:CDS
TTATCTTCCATGTGATACAC+CGG 0.631553 2_3:-66279339 Msa0306950:CDS
ATACACTTATCAATGCTGGA+GGG 0.636307 2_3:-66277530 Msa0306950:CDS
AGTGGCTCCGGTGTATCACA+TGG 0.636429 2_3:+66279332 None:intergenic
CATACACTTATCAATGCTGG+AGG 0.637914 2_3:-66277531 Msa0306950:CDS
AAGCTTAATTCGATAGCCAG+TGG 0.639310 2_3:+66277905 None:intergenic
GGATTGGGAAACTTAATGAG+TGG 0.639444 2_3:-66279265 Msa0306950:CDS
AGTCGCCATGACCCTCATTG+CGG 0.642860 2_3:+66277066 None:intergenic
GTTTCCCAATCCCTTTACCA+CGG 0.644963 2_3:+66279276 None:intergenic
GAAGAACTTGCTACCCTCCG+TGG 0.645545 2_3:-66279293 Msa0306950:CDS
TTACCTACCGAATCGTCCAA+CGG 0.648964 2_3:-66276916 Msa0306950:CDS
CAATACAAGAACAAAGGCAA+AGG 0.649467 2_3:-66276031 Msa0306950:three_prime_UTR
TGGAAGAGAAATGCTTGCTG+GGG 0.650436 2_3:-66278550 Msa0306950:CDS
CATGTGTGTAACGATGAGTA+GGG 0.652673 2_3:+66281859 None:intergenic
TACACTTATCAATGCTGGAG+GGG 0.655663 2_3:-66277529 Msa0306950:CDS
CTAGATGACATTCCAGGACA+CGG 0.658294 2_3:-66281915 Msa0306950:CDS
TCCCAATCCCTTTACCACGG+AGG 0.660448 2_3:+66279279 None:intergenic
TGCATTGTATCCTTGAAATG+TGG 0.660791 2_3:+66277573 None:intergenic
GTGGAAAGAAGTCCGCAATG+AGG 0.664613 2_3:-66277078 Msa0306950:CDS
AAGTTTCCTTATCCACGTCG+AGG 0.665623 2_3:-66279152 Msa0306950:CDS
CGACTAGTTCTTCCTCGACG+TGG 0.666072 2_3:+66279140 None:intergenic
TATGTAGCGGTACTTGAAGA+CGG 0.666178 2_3:+66278508 None:intergenic
GTCATGGCGACTTAAAGGAT+AGG 0.670364 2_3:-66277055 Msa0306950:CDS
ATAAACCTACGACTAACCGT+TGG 0.677401 2_3:+66276900 None:intergenic
AAGGAGTAGCAGCCACCGTG+TGG 0.681369 2_3:-66277823 Msa0306950:CDS
ACCCTCCCTAGAATAATCAG+AGG 0.685577 2_3:+66276554 None:intergenic
TAACCGTTGGACGATTCGGT+AGG 0.688836 2_3:+66276913 None:intergenic
TTAAGCTTACCTCATCCACA+AGG 0.690256 2_3:-66277890 Msa0306950:CDS
GAAAAGTGGCATGCTTGGAG+AGG 0.698902 2_3:-66282085 Msa0306950:CDS
GAAGACGGCGAATGATAACA+GGG 0.731478 2_3:+66278523 None:intergenic
TTTAGCCAACTGCCACACGG+TGG 0.746743 2_3:+66277811 None:intergenic
ACTTAAAGGATAGGTCATGG+TGG 0.760119 2_3:-66277046 Msa0306950:CDS
TAGCTAGTAAGACTGCATGG+AGG 0.781786 2_3:-66278587 Msa0306950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATAATTAATTAATTTTT+TGG - chr2_3:66276831-66276850 Msa0306950:CDS 0.0%
!!! ATATAATTAATTAATTTTTT+GGG - chr2_3:66276832-66276851 Msa0306950:CDS 0.0%
!! GTTAAATTAATTAAAAAGTA+GGG + chr2_3:66276719-66276738 None:intergenic 10.0%
!! AGTTAAATTAATTAAAAAGT+AGG + chr2_3:66276720-66276739 None:intergenic 10.0%
!!! TTTATATCTTAAAAATTTTG+TGG + chr2_3:66278129-66278148 None:intergenic 10.0%
!!! ACAAAATTTTTAAGATATAA+AGG - chr2_3:66278128-66278147 Msa0306950:intron 10.0%
!!! TAACTTTTTTTTTTTTTTTG+AGG + chr2_3:66278198-66278217 None:intergenic 10.0%
!! AAAAAAAGATAATACTAATA+TGG - chr2_3:66278999-66279018 Msa0306950:CDS 10.0%
!!! AATAAAAAAAGTCATTTTTT+TGG - chr2_3:66279081-66279100 Msa0306950:intron 10.0%
!!! AATTAAAAAGTCATTTTTTT+TGG - chr2_3:66279122-66279141 Msa0306950:intron 10.0%
!!! TTTTTACTTATATTTAAGTT+CGG + chr2_3:66280505-66280524 None:intergenic 10.0%
!!! TTAATTAAATTTTTTTATCC+TGG - chr2_3:66280602-66280621 Msa0306950:intron 10.0%
!! ATTAATTATATTATTGCTTC+TGG + chr2_3:66276823-66276842 None:intergenic 15.0%
!!! GGTAATTTTTTAATTTCTAA+TGG - chr2_3:66277164-66277183 Msa0306950:CDS 15.0%
!! AGAAATAAATTCAGATATAT+TGG - chr2_3:66277714-66277733 Msa0306950:intron 15.0%
!! TATATATGAATGATTATGAA+TGG + chr2_3:66278325-66278344 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr2_3:66278566-66278585 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_3:66278590-66278609 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_3:66278589-66278608 Msa0306950:intron 15.0%
!!! TTTTTATCTTATTTGATGTT+AGG + chr2_3:66278720-66278739 None:intergenic 15.0%
!!! ATACAGATAGATTTTATAAT+TGG - chr2_3:66279031-66279050 Msa0306950:intron 15.0%
!! AAACGAAATACTAAAAAAAT+AGG - chr2_3:66279551-66279570 Msa0306950:intron 15.0%
!! AAGATAAAAATTCAAGAATA+TGG + chr2_3:66282732-66282751 None:intergenic 15.0%
!! AATGTATAGAATAGAAAAGA+TGG - chr2_3:66277486-66277505 Msa0306950:CDS 20.0%
!! AACACAATTTATTATCAACA+AGG - chr2_3:66277782-66277801 Msa0306950:CDS 20.0%
!! AATAAATATTTACGAACAGA+AGG + chr2_3:66277838-66277857 None:intergenic 20.0%
!! TCTTCCTAAAAGTAAAATAA+AGG - chr2_3:66277927-66277946 Msa0306950:CDS 20.0%
!!! GTATCCTTTATTTTACTTTT+AGG + chr2_3:66277934-66277953 None:intergenic 20.0%
!!! ATATGGAACAACTTTTTATT+TGG - chr2_3:66278102-66278121 Msa0306950:intron 20.0%
!!! GAATGGAATTTTTTTTTTGA+GGG + chr2_3:66278308-66278327 None:intergenic 20.0%
!!! TGAATGGAATTTTTTTTTTG+AGG + chr2_3:66278309-66278328 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_3:66278580-66278599 Msa0306950:CDS 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr2_3:66278623-66278642 None:intergenic 20.0%
!! TATTTAAAAGATGTTGAGAT+TGG + chr2_3:66278876-66278895 None:intergenic 20.0%
!!! ACAATAAAAGTATAGACTTT+TGG + chr2_3:66279184-66279203 None:intergenic 20.0%
!!! TCTATATGTAGTTTGTTTTA+CGG - chr2_3:66279265-66279284 Msa0306950:CDS 20.0%
!!! GTCACTTTTTTTTTTTTTGA+AGG + chr2_3:66279340-66279359 None:intergenic 20.0%
!! TAAAAATCTCATAAGGAATA+AGG + chr2_3:66280219-66280238 None:intergenic 20.0%
!! TTAACCTTCCTTTAATAAAA+TGG - chr2_3:66280316-66280335 Msa0306950:intron 20.0%
!!! CAATGATTCCATTTTATTAA+AGG + chr2_3:66280327-66280346 None:intergenic 20.0%
!! AATGTTTCATGTAAAATTCA+AGG + chr2_3:66280641-66280660 None:intergenic 20.0%
!! ACATAGAAAATAGTTTAGAT+GGG - chr2_3:66280775-66280794 Msa0306950:intron 20.0%
!! TATTAAAGTTTCAAACACTT+TGG + chr2_3:66281278-66281297 None:intergenic 20.0%
!! AGCTGTTGTATATAAAAATT+GGG - chr2_3:66281518-66281537 Msa0306950:intron 20.0%
!! TAAAAATTCAAGAATATGGT+AGG + chr2_3:66282728-66282747 None:intergenic 20.0%
! CTAATAGCAATTGGAAAATT+TGG + chr2_3:66276039-66276058 None:intergenic 25.0%
! TCTATCAAGAAAAGAGATAT+TGG + chr2_3:66276087-66276106 None:intergenic 25.0%
! TGGAGATGAATTACAAAAAA+AGG - chr2_3:66276252-66276271 Msa0306950:three_prime_UTR 25.0%
! GGAGATGAATTACAAAAAAA+GGG - chr2_3:66276253-66276272 Msa0306950:three_prime_UTR 25.0%
! AATTACAAAAAAAGGGTTAG+AGG - chr2_3:66276260-66276279 Msa0306950:three_prime_UTR 25.0%
! ATTACAAAAAAAGGGTTAGA+GGG - chr2_3:66276261-66276280 Msa0306950:three_prime_UTR 25.0%
! TTTAATGAAGAAAAGCTTGT+TGG - chr2_3:66276292-66276311 Msa0306950:three_prime_UTR 25.0%
! TATATAGTAGTACAAGCTTA+TGG + chr2_3:66276445-66276464 None:intergenic 25.0%
! TGTGTAATAAAGATCTGATT+CGG - chr2_3:66276638-66276657 Msa0306950:CDS 25.0%
! TTCTGTTGTACTAATATTAG+TGG - chr2_3:66276685-66276704 Msa0306950:CDS 25.0%
! AATTCTCAGTTACATTTGAT+TGG - chr2_3:66276959-66276978 Msa0306950:CDS 25.0%
! ATTCTCAGTTACATTTGATT+GGG - chr2_3:66276960-66276979 Msa0306950:CDS 25.0%
!!! TCACAAAAGTTGTTGATTTT+TGG + chr2_3:66277232-66277251 None:intergenic 25.0%
!!! TCAACTTTTCCTTTGAAAAT+TGG + chr2_3:66277261-66277280 None:intergenic 25.0%
! AGAATAGAAAAGATGGTATA+TGG - chr2_3:66277493-66277512 Msa0306950:CDS 25.0%
! CATTCAAGAATTAAGATGTA+TGG - chr2_3:66277651-66277670 Msa0306950:CDS 25.0%
! AATTCAGATATATTGGTCAT+TGG - chr2_3:66277721-66277740 Msa0306950:intron 25.0%
! AAATAAGTTTCTTGTGTTCA+AGG + chr2_3:66277907-66277926 None:intergenic 25.0%
!!! CAAAGTTTTTTTTTCTTGTG+TGG + chr2_3:66277988-66278007 None:intergenic 25.0%
! GTAAACATAATAGATAGAGA+GGG + chr2_3:66278223-66278242 None:intergenic 25.0%
!!! TTTTTTTTTGAGGGAATGAA+TGG + chr2_3:66278299-66278318 None:intergenic 25.0%
!! TTATCTTATTTGATGTTAGG+CGG + chr2_3:66278717-66278736 None:intergenic 25.0%
! AAGTTAACCTTATTATCAGT+TGG - chr2_3:66278953-66278972 Msa0306950:CDS 25.0%
! AAATCAACCAACTGATAATA+AGG + chr2_3:66278963-66278982 None:intergenic 25.0%
! AAAAAGTGACTGAGTTTAAA+TGG - chr2_3:66279350-66279369 Msa0306950:intron 25.0%
! GTCTAATCAATAATTGTTCT+AGG + chr2_3:66279420-66279439 None:intergenic 25.0%
! GAACATAAATGTTTAGATTC+AGG + chr2_3:66279994-66280013 None:intergenic 25.0%
! CATAAATATCAAGTACATCT+TGG + chr2_3:66280147-66280166 None:intergenic 25.0%
! GATGTACTTGATATTTATGA+AGG - chr2_3:66280148-66280167 Msa0306950:intron 25.0%
!! TCTCTAATTTTACTATGCAA+AGG + chr2_3:66280196-66280215 None:intergenic 25.0%
!! AGTTCTCTAAAAATCTCATA+AGG + chr2_3:66280226-66280245 None:intergenic 25.0%
!!! AGATTTTTAGAGAACTTGTT+AGG - chr2_3:66280230-66280249 Msa0306950:intron 25.0%
!! GATTCCATTTTATTAAAGGA+AGG + chr2_3:66280323-66280342 None:intergenic 25.0%
!! TACTTATATTTAAGTTCGGA+GGG + chr2_3:66280501-66280520 None:intergenic 25.0%
!! TTACTTATATTTAAGTTCGG+AGG + chr2_3:66280502-66280521 None:intergenic 25.0%
! CACATAGAAAATAGTTTAGA+TGG - chr2_3:66280774-66280793 Msa0306950:intron 25.0%
! CTAGAAATTGTATGAAAATG+AGG - chr2_3:66280848-66280867 Msa0306950:intron 25.0%
! GAGTTTATTCTACTTATGTA+TGG + chr2_3:66280989-66281008 None:intergenic 25.0%
! CTGTTTGTAGCTATTATAAA+TGG + chr2_3:66281345-66281364 None:intergenic 25.0%
! CAGCTGTTGTATATAAAAAT+TGG - chr2_3:66281517-66281536 Msa0306950:intron 25.0%
!!! TACCATTTGTTTTGATGAAT+TGG + chr2_3:66281675-66281694 None:intergenic 25.0%
!! ATTTCATTTGAAACTTTCAG+AGG - chr2_3:66281700-66281719 Msa0306950:intron 25.0%
! AATCATGCACCATTATTATA+TGG - chr2_3:66281986-66282005 Msa0306950:CDS 25.0%
! ATCATGCACCATTATTATAT+GGG - chr2_3:66281987-66282006 Msa0306950:CDS 25.0%
!!! GTTTTTAAGAATGCTAATTC+AGG + chr2_3:66282147-66282166 None:intergenic 25.0%
! TTGAGAATAACATCATGAAA+AGG - chr2_3:66282331-66282350 Msa0306950:intron 25.0%
! AGTTTATTCACTATTGAGTA+CGG + chr2_3:66282694-66282713 None:intergenic 25.0%
! AAAATCCTTAGAATATGCAA+AGG - chr2_3:66282924-66282943 Msa0306950:intron 25.0%
!! AATGTCTAATTTGCAAGAAA+TGG + chr2_3:66282987-66283006 None:intergenic 25.0%
GCAGAGTTCAATTCTAAATA+AGG - chr2_3:66276008-66276027 Msa0306950:three_prime_UTR 30.0%
TACGTACTACTAATAGCAAT+TGG + chr2_3:66276048-66276067 None:intergenic 30.0%
AAGTAAGAATCAGACATTAG+AGG + chr2_3:66276116-66276135 None:intergenic 30.0%
ACAAGTGTATCAGTACAAAT+AGG + chr2_3:66276184-66276203 None:intergenic 30.0%
!!! CTTGTTTTGAAGTAGTGTTT+AGG - chr2_3:66276199-66276218 Msa0306950:three_prime_UTR 30.0%
TTGAAGTAGTGTTTAGGTAT+TGG - chr2_3:66276205-66276224 Msa0306950:three_prime_UTR 30.0%
! TGATCGAATTGATGAGTTTT+TGG - chr2_3:66276343-66276362 Msa0306950:three_prime_UTR 30.0%
! GATCGAATTGATGAGTTTTT+GGG - chr2_3:66276344-66276363 Msa0306950:three_prime_UTR 30.0%
AAGTCAAGTCAACTACATTA+TGG - chr2_3:66276596-66276615 Msa0306950:CDS 30.0%
! GGTGTGTTATTATTAGCAAA+GGG - chr2_3:66276853-66276872 Msa0306950:CDS 30.0%
TTACTGTCTTGAGGTAAAAT+TGG + chr2_3:66277041-66277060 None:intergenic 30.0%
!! TAACTTTTGTTTGCAACTCT+TGG - chr2_3:66277091-66277110 Msa0306950:CDS 30.0%
!! AACTTTTGTTTGCAACTCTT+GGG - chr2_3:66277092-66277111 Msa0306950:CDS 30.0%
! TGACAACTACCAATTTTCAA+AGG - chr2_3:66277249-66277268 Msa0306950:CDS 30.0%
AAGAGATAAAGTTGTCACAT+AGG - chr2_3:66277337-66277356 Msa0306950:intron 30.0%
TTGGGTTTATTTAATCCACA+TGG - chr2_3:66277463-66277482 Msa0306950:CDS 30.0%
TCTATTCTATACATTCCATG+TGG + chr2_3:66277481-66277500 None:intergenic 30.0%
!! AACTGTCAAGTTGAATTCAA+TGG - chr2_3:66277607-66277626 Msa0306950:CDS 30.0%
CAAGAATTAAGATGTATGGT+TGG - chr2_3:66277655-66277674 Msa0306950:CDS 30.0%
!! TTTCGTTCGTTTCTGAAATA+TGG - chr2_3:66278085-66278104 Msa0306950:intron 30.0%
CGTAAACATAATAGATAGAG+AGG + chr2_3:66278224-66278243 None:intergenic 30.0%
ATTGCATTGAAAAGTGAAAG+TGG + chr2_3:66278490-66278509 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr2_3:66278671-66278690 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr2_3:66278672-66278691 Msa0306950:intron 30.0%
!!! CAGCAATTTCTTTTTTGAAG+AGG - chr2_3:66278746-66278765 Msa0306950:CDS 30.0%
ATCACTACAAATTAAGTGAC+TGG - chr2_3:66279310-66279329 Msa0306950:CDS 30.0%
TCACTACAAATTAAGTGACT+GGG - chr2_3:66279311-66279330 Msa0306950:CDS 30.0%
ACACTTATCATATCGCAATA+TGG + chr2_3:66279505-66279524 None:intergenic 30.0%
TCAATGTTTCTTCTACATGT+AGG - chr2_3:66280683-66280702 Msa0306950:intron 30.0%
! TATTTTCTATGTGCTTTGCT+TGG + chr2_3:66280767-66280786 None:intergenic 30.0%
ATCAAACTTCTTTATGTTGC+AGG - chr2_3:66280913-66280932 Msa0306950:intron 30.0%
! TTTTGTGAATGACATACCAA+TGG + chr2_3:66281237-66281256 None:intergenic 30.0%
ATAAACTATGATTCTTGTGC+AGG - chr2_3:66281295-66281314 Msa0306950:intron 30.0%
TTTCCAATGCAAATTTACCA+GGG + chr2_3:66281494-66281513 None:intergenic 30.0%
ATTTCCAATGCAAATTTACC+AGG + chr2_3:66281495-66281514 None:intergenic 30.0%
ATTTGCACTGTTAGAAGTTT+CGG + chr2_3:66281597-66281616 None:intergenic 30.0%
AAACTTCTAACAGTGCAAAT+AGG - chr2_3:66281597-66281616 Msa0306950:intron 30.0%
AACTTCTAACAGTGCAAATA+GGG - chr2_3:66281598-66281617 Msa0306950:intron 30.0%
!!! GAGCGTTTTTTTTTCTTCAT+CGG + chr2_3:66281643-66281662 None:intergenic 30.0%
GTCCAATTCATCAAAACAAA+TGG - chr2_3:66281670-66281689 Msa0306950:intron 30.0%
!! TCATAAGTTTTAGTCCATGA+GGG + chr2_3:66281750-66281769 None:intergenic 30.0%
!! ATCATAAGTTTTAGTCCATG+AGG + chr2_3:66281751-66281770 None:intergenic 30.0%
!! TGTTGATGGATTGGAAATAT+GGG - chr2_3:66281789-66281808 Msa0306950:intron 30.0%
! TCAATTCTAGTCTTCATTTG+TGG + chr2_3:66281958-66281977 None:intergenic 30.0%
!! CTAGAATAATCAGAGGTATT+GGG + chr2_3:66282420-66282439 None:intergenic 30.0%
CAATACCTCTGATTATTCTA+GGG - chr2_3:66282419-66282438 Msa0306950:intron 30.0%
TAGCAAGAATTCGAAGATAA+TGG + chr2_3:66282494-66282513 None:intergenic 30.0%
AATGAGCTTGGACTAATTAA+AGG + chr2_3:66282830-66282849 None:intergenic 30.0%
!! AACTGATTTTTGTGCTACTA+TGG - chr2_3:66282864-66282883 Msa0306950:intron 30.0%
!! ACTGATTTTTGTGCTACTAT+GGG - chr2_3:66282865-66282884 Msa0306950:intron 30.0%
TATTGCCTTTGCATATTCTA+AGG + chr2_3:66282932-66282951 None:intergenic 30.0%
! TTTAGAATTGAACTCTGCAG+TGG + chr2_3:66276006-66276025 None:intergenic 35.0%
GTACGTAACAAGAAGAATCA+TGG - chr2_3:66276232-66276251 Msa0306950:three_prime_UTR 35.0%
!! GAACGTTTGATTTGATGTCA+TGG + chr2_3:66276322-66276341 None:intergenic 35.0%
!! AATTGATGAGTTTTTGGGCA+AGG - chr2_3:66276349-66276368 Msa0306950:three_prime_UTR 35.0%
!! ATTGATGAGTTTTTGGGCAA+GGG - chr2_3:66276350-66276369 Msa0306950:three_prime_UTR 35.0%
GCTTATGGTGAAATTAAGCA+AGG + chr2_3:66276430-66276449 None:intergenic 35.0%
ACAGATTTACAACTTGCAAC+AGG + chr2_3:66276567-66276586 None:intergenic 35.0%
! GGGTGTGTTATTATTAGCAA+AGG - chr2_3:66276852-66276871 Msa0306950:CDS 35.0%
TTATTAGCAAAGGGACTGAA+AGG - chr2_3:66276862-66276881 Msa0306950:CDS 35.0%
TATTAGCAAAGGGACTGAAA+GGG - chr2_3:66276863-66276882 Msa0306950:CDS 35.0%
TTTCTGATTATGAAAGCTCC+TGG + chr2_3:66277006-66277025 None:intergenic 35.0%
TCTTGAGGTAAAATTGGCTA+TGG + chr2_3:66277035-66277054 None:intergenic 35.0%
GAGTTGCAAACAAAAGTTAC+AGG + chr2_3:66277090-66277109 None:intergenic 35.0%
! TCGTGTTTTCTTTGCAAACA+AGG - chr2_3:66277143-66277162 Msa0306950:CDS 35.0%
!! AGGAAAAGTTGATAGTGACA+CGG - chr2_3:66277269-66277288 Msa0306950:intron 35.0%
ACTTTCTCTCTCTATTGCTT+TGG + chr2_3:66277298-66277317 None:intergenic 35.0%
TCACATAGGTTGTCACAAAA+TGG - chr2_3:66277351-66277370 Msa0306950:intron 35.0%
! CAAGTTGAATTCAATGGCTT+TGG - chr2_3:66277613-66277632 Msa0306950:CDS 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_3:66278437-66278456 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr2_3:66278537-66278556 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr2_3:66278541-66278560 None:intergenic 35.0%
!! AGAAGCATGTTTTGTGATAC+AGG - chr2_3:66279615-66279634 Msa0306950:intron 35.0%
TTATCTTCCATGTGATACAC+CGG - chr2_3:66279639-66279658 Msa0306950:intron 35.0%
GATTGGGAAACTTAATGAGT+GGG - chr2_3:66279714-66279733 Msa0306950:intron 35.0%
TATGCATGCTACAATGACTT+GGG - chr2_3:66279751-66279770 Msa0306950:intron 35.0%
! TTTTCTGATCCACCAATAAC+AGG + chr2_3:66279808-66279827 None:intergenic 35.0%
!! TTGCTATTGCTAACCTGTTT+TGG + chr2_3:66279872-66279891 None:intergenic 35.0%
GCAACACAAACATTAGAGAT+CGG - chr2_3:66279888-66279907 Msa0306950:intron 35.0%
!! AGAGAACTTGTTAGGAATGA+TGG - chr2_3:66280238-66280257 Msa0306950:intron 35.0%
TATATACCTTTGATCACGTC+AGG + chr2_3:66280289-66280308 None:intergenic 35.0%
TTTGGTCTCCATAAACACTT+GGG + chr2_3:66280734-66280753 None:intergenic 35.0%
! TTTTGGTCTCCATAAACACT+TGG + chr2_3:66280735-66280754 None:intergenic 35.0%
! TTGCTTGGATGGAACTATTT+TGG + chr2_3:66280752-66280771 None:intergenic 35.0%
ATCATCAACTAGTTAGCCAT+TGG - chr2_3:66281218-66281237 Msa0306950:intron 35.0%
TGCATTGTATCCTTGAAATG+TGG + chr2_3:66281408-66281427 None:intergenic 35.0%
TGCATATAAATGCCTTAGCT+AGG - chr2_3:66281424-66281443 Msa0306950:intron 35.0%
ATACACTTATCAATGCTGGA+GGG - chr2_3:66281448-66281467 Msa0306950:intron 35.0%
TTTCCCTGGTAAATTTGCAT+TGG - chr2_3:66281488-66281507 Msa0306950:intron 35.0%
!! CTGTTGATGGATTGGAAATA+TGG - chr2_3:66281788-66281807 Msa0306950:intron 35.0%
TATGGGATGCAATTGAAACT+TGG - chr2_3:66281806-66281825 Msa0306950:intron 35.0%
ATGGGATGCAATTGAAACTT+GGG - chr2_3:66281807-66281826 Msa0306950:intron 35.0%
ATGCACCATTATTATATGGG+TGG - chr2_3:66281990-66282009 Msa0306950:CDS 35.0%
AGAAGCCACCCATATAATAA+TGG + chr2_3:66281998-66282017 None:intergenic 35.0%
CATTGATAGAAGTTCTGTCT+AGG - chr2_3:66282202-66282221 Msa0306950:intron 35.0%
CGTTTCTGTTCTTCAAACTT+GGG + chr2_3:66282365-66282384 None:intergenic 35.0%
CCAAGTTTGAAGAACAGAAA+CGG - chr2_3:66282363-66282382 Msa0306950:intron 35.0%
CAAGTTTGAAGAACAGAAAC+GGG - chr2_3:66282364-66282383 Msa0306950:intron 35.0%
! CCTAGAATAATCAGAGGTAT+TGG + chr2_3:66282421-66282440 None:intergenic 35.0%
CCAATACCTCTGATTATTCT+AGG - chr2_3:66282418-66282437 Msa0306950:intron 35.0%
TTTCAGATGGATATGCTGTT+GGG + chr2_3:66282471-66282490 None:intergenic 35.0%
! TCGAAGATAATGGTTTCAGA+TGG + chr2_3:66282484-66282503 None:intergenic 35.0%
TCAAACCAAAGACTTTGCTT+TGG - chr2_3:66282518-66282537 Msa0306950:intron 35.0%
TCACTGACACTTTAGATTGA+AGG - chr2_3:66282559-66282578 Msa0306950:intron 35.0%
! CTTTAGATTGAAGGTGTGTT+TGG - chr2_3:66282568-66282587 Msa0306950:intron 35.0%
TGAATGTACCCACATATGTT+TGG + chr2_3:66282607-66282626 None:intergenic 35.0%
TCATTCATACACTCTAGTCT+TGG + chr2_3:66282764-66282783 None:intergenic 35.0%
!! GAAAGTATTACGAATGAGCT+TGG + chr2_3:66282842-66282861 None:intergenic 35.0%
CTATGGGAATAAAAGAGCAA+AGG - chr2_3:66282881-66282900 Msa0306950:intron 35.0%
CAAAGGCAATACAAGAACAA+AGG - chr2_3:66282941-66282960 Msa0306950:intron 35.0%
CAATACAAGAACAAAGGCAA+AGG - chr2_3:66282947-66282966 Msa0306950:intron 35.0%
ACAAAGGCAAAGGTGATAAA+AGG - chr2_3:66282957-66282976 Msa0306950:intron 35.0%
TGGAGGGTCATAATGTCATA+TGG + chr2_3:66275986-66276005 None:intergenic 40.0%
!! GTAGTGTTTAGGTATTGGCT+TGG - chr2_3:66276210-66276229 Msa0306950:three_prime_UTR 40.0%
AAAAAGGGTTAGAGGGAAAG+TGG - chr2_3:66276268-66276287 Msa0306950:three_prime_UTR 40.0%
GTGAAATTAAGCAAGGAGAG+TGG + chr2_3:66276423-66276442 None:intergenic 40.0%
GAAGAGTGAAGAAGAAGCAA+AGG - chr2_3:66276511-66276530 Msa0306950:exon 40.0%
GAAAGGGAAACATGGAAAAG+TGG - chr2_3:66276879-66276898 Msa0306950:CDS 40.0%
CATGTGTGTAACGATGAGTA+GGG + chr2_3:66277122-66277141 None:intergenic 40.0%
TCATGTGTGTAACGATGAGT+AGG + chr2_3:66277123-66277142 None:intergenic 40.0%
CTGTTGTGACAACTAAGCTT+GGG - chr2_3:66277445-66277464 Msa0306950:CDS 40.0%
!! GTTGAATTCAATGGCTTTGG+AGG - chr2_3:66277616-66277635 Msa0306950:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_3:66278676-66278695 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr2_3:66278538-66278557 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_3:66278676-66278695 Msa0306950:intron 40.0%
CAAAGTCATCAGGTCTGTTT+GGG + chr2_3:66278840-66278859 None:intergenic 40.0%
! AGACCTGATGACTTTGGAAA+TGG - chr2_3:66278844-66278863 Msa0306950:CDS 40.0%
TGTCCATTTCCAAAGTCATC+AGG + chr2_3:66278850-66278869 None:intergenic 40.0%
GGATTGGGAAACTTAATGAG+TGG - chr2_3:66279713-66279732 Msa0306950:intron 40.0%
CTATGCATGCTACAATGACT+TGG - chr2_3:66279750-66279769 Msa0306950:intron 40.0%
ATAACAGGACGTGCATAATC+TGG + chr2_3:66279793-66279812 None:intergenic 40.0%
GATTATGCACGTCCTGTTAT+TGG - chr2_3:66279793-66279812 Msa0306950:intron 40.0%
!!! TGCTAACCTGTTTTGGTATG+TGG + chr2_3:66279865-66279884 None:intergenic 40.0%
GTTCCAAGAGATGAACAGTT+TGG - chr2_3:66280010-66280029 Msa0306950:intron 40.0%
TGACCAAACTGTTCATCTCT+TGG + chr2_3:66280016-66280035 None:intergenic 40.0%
TACTATGCAAAGGTCCACTT+GGG + chr2_3:66280186-66280205 None:intergenic 40.0%
TTACTATGCAAAGGTCCACT+TGG + chr2_3:66280187-66280206 None:intergenic 40.0%
TTGTAGCTAGTAAGACTGCA+TGG - chr2_3:66280388-66280407 Msa0306950:intron 40.0%
TTTGGAAGAGAAATGCTTGC+TGG - chr2_3:66280426-66280445 Msa0306950:intron 40.0%
TTGGAAGAGAAATGCTTGCT+GGG - chr2_3:66280427-66280446 Msa0306950:intron 40.0%
TATGTAGCGGTACTTGAAGA+CGG + chr2_3:66280473-66280492 None:intergenic 40.0%
CAAGGAACATATTGAGAACC+AGG + chr2_3:66280623-66280642 None:intergenic 40.0%
TTCTATGTGCTTTGCTTGGA+TGG + chr2_3:66280763-66280782 None:intergenic 40.0%
! AGATGGGCTTACAATAGATG+AGG - chr2_3:66280791-66280810 Msa0306950:intron 40.0%
TGTTCTAGTGGCATAAGTCT+TGG + chr2_3:66281020-66281039 None:intergenic 40.0%
!! TAGAAACAGGAGTGTTCTAG+TGG + chr2_3:66281032-66281051 None:intergenic 40.0%
!! CTCCTGTTTCTACAAGATGA+TGG - chr2_3:66281040-66281059 Msa0306950:intron 40.0%
TGCCATCATCTTGTAGAAAC+AGG + chr2_3:66281045-66281064 None:intergenic 40.0%
AAGCTTAATTCGATAGCCAG+TGG + chr2_3:66281076-66281095 None:intergenic 40.0%
TTAAGCTTACCTCATCCACA+AGG - chr2_3:66281088-66281107 Msa0306950:intron 40.0%
! GTTTTCACTCCATCACATGA+AGG - chr2_3:66281136-66281155 Msa0306950:intron 40.0%
TATGCTGCTGTGAATGATTC+AGG - chr2_3:66281193-66281212 Msa0306950:intron 40.0%
GGCTTCAAGAGCTTATGAAT+TGG + chr2_3:66281387-66281406 None:intergenic 40.0%
GATAAGTGTATGCCTAGCTA+AGG + chr2_3:66281439-66281458 None:intergenic 40.0%
AGGCATACACTTATCAATGC+TGG - chr2_3:66281444-66281463 Msa0306950:intron 40.0%
CATACACTTATCAATGCTGG+AGG - chr2_3:66281447-66281466 Msa0306950:intron 40.0%
TACACTTATCAATGCTGGAG+GGG - chr2_3:66281449-66281468 Msa0306950:intron 40.0%
! CTAGAGAAAACAGTTTTCCC+TGG - chr2_3:66281474-66281493 Msa0306950:intron 40.0%
AATAGGGTTACCTCATGTAG+AGG - chr2_3:66281614-66281633 Msa0306950:intron 40.0%
ATAGGGTTACCTCATGTAGA+GGG - chr2_3:66281615-66281634 Msa0306950:intron 40.0%
CCAATCCATCAACAGCAAAA+GGG + chr2_3:66281783-66281802 None:intergenic 40.0%
TCCAATCCATCAACAGCAAA+AGG + chr2_3:66281784-66281803 None:intergenic 40.0%
ATGACTATGAACTCCAACTC+TGG - chr2_3:66281878-66281897 Msa0306950:CDS 40.0%
ACTTAAAGGATAGGTCATGG+TGG - chr2_3:66281932-66281951 Msa0306950:CDS 40.0%
TTTCATGCAGCTGTGAACTT+TGG - chr2_3:66282021-66282040 Msa0306950:CDS 40.0%
TTTGGACAATACCCTTATGC+AGG - chr2_3:66282039-66282058 Msa0306950:CDS 40.0%
ATAAACCTACGACTAACCGT+TGG + chr2_3:66282081-66282100 None:intergenic 40.0%
ATGACACACCTAGAAGAGTT+TGG + chr2_3:66282185-66282204 None:intergenic 40.0%
TCGACTGAAGAGGTTTATCT+TGG - chr2_3:66282228-66282247 Msa0306950:intron 40.0%
GACAGACAGTAAACCCTAAT+TGG - chr2_3:66282250-66282269 Msa0306950:intron 40.0%
! CAGCATCTGAAGTCCAATTA+GGG + chr2_3:66282266-66282285 None:intergenic 40.0%
! TCAGCATCTGAAGTCCAATT+AGG + chr2_3:66282267-66282286 None:intergenic 40.0%
CCGTTTCTGTTCTTCAAACT+TGG + chr2_3:66282366-66282385 None:intergenic 40.0%
AGGGTATAAGGCAATTTCAC+TGG + chr2_3:66282390-66282409 None:intergenic 40.0%
! TTGGGAAACAGAAGGGTATA+AGG + chr2_3:66282402-66282421 None:intergenic 40.0%
!! AGAGGTATTGGGAAACAGAA+GGG + chr2_3:66282409-66282428 None:intergenic 40.0%
! TACCTCTGATTATTCTAGGG+AGG - chr2_3:66282422-66282441 Msa0306950:intron 40.0%
! ACCTCTGATTATTCTAGGGA+GGG - chr2_3:66282423-66282442 Msa0306950:intron 40.0%
GTTTCAGATGGATATGCTGT+TGG + chr2_3:66282472-66282491 None:intergenic 40.0%
TGACACCAAAGCAAAGTCTT+TGG + chr2_3:66282526-66282545 None:intergenic 40.0%
!! ATTGAAGGTGTGTTTGGTGT+TGG - chr2_3:66282574-66282593 Msa0306950:intron 40.0%
GACACGATCCAAACATATGT+GGG - chr2_3:66282596-66282615 Msa0306950:CDS 40.0%
GAATTGAACTCTGCAGTGGA+GGG + chr2_3:66276002-66276021 None:intergenic 45.0%
AGAATTGAACTCTGCAGTGG+AGG + chr2_3:66276003-66276022 None:intergenic 45.0%
AGAGTGGAAAAACCTGGATC+AGG + chr2_3:66276407-66276426 None:intergenic 45.0%
AAGGGACTGAAAGGGAAACA+TGG - chr2_3:66276871-66276890 Msa0306950:CDS 45.0%
ACATGGAAAAGTGGCATGCT+TGG - chr2_3:66276888-66276907 Msa0306950:CDS 45.0%
TGATTGGGACCATGAGAAGA+TGG - chr2_3:66276975-66276994 Msa0306950:CDS 45.0%
GATTGGGACCATGAGAAGAT+GGG - chr2_3:66276976-66276995 Msa0306950:CDS 45.0%
! CATCTAGGGTTACTGTCTTG+AGG + chr2_3:66277050-66277069 None:intergenic 45.0%
GTAACCCTAGATGACATTCC+AGG - chr2_3:66277057-66277076 Msa0306950:CDS 45.0%
GTGTCCTGGAATGTCATCTA+GGG + chr2_3:66277064-66277083 None:intergenic 45.0%
CTAGATGACATTCCAGGACA+CGG - chr2_3:66277063-66277082 Msa0306950:CDS 45.0%
CCAAGCTTAGTTGTCACAAC+AGG + chr2_3:66277447-66277466 None:intergenic 45.0%
CCTGTTGTGACAACTAAGCT+TGG - chr2_3:66277444-66277463 Msa0306950:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_3:66278675-66278694 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_3:66278675-66278694 Msa0306950:intron 45.0%
CCAAAGTCATCAGGTCTGTT+TGG + chr2_3:66278841-66278860 None:intergenic 45.0%
CCAAACAGACCTGATGACTT+TGG - chr2_3:66278838-66278857 Msa0306950:CDS 45.0%
GTTTCCCAATCCCTTTACCA+CGG + chr2_3:66279705-66279724 None:intergenic 45.0%
GCATAATCTGGACCATCATC+TGG + chr2_3:66279781-66279800 None:intergenic 45.0%
TATGCACGTCCTGTTATTGG+TGG - chr2_3:66279796-66279815 Msa0306950:intron 45.0%
AAGTTTCCTTATCCACGTCG+AGG - chr2_3:66279826-66279845 Msa0306950:intron 45.0%
AGTCGTCCACATACCAAAAC+AGG - chr2_3:66279856-66279875 Msa0306950:intron 45.0%
TCACACAGAGATCTAAGCTC+TGG + chr2_3:66280097-66280116 None:intergenic 45.0%
!! GGAAGTTTTAACCTCCCAAG+TGG - chr2_3:66280169-66280188 Msa0306950:intron 45.0%
TAGCTAGTAAGACTGCATGG+AGG - chr2_3:66280391-66280410 Msa0306950:intron 45.0%
TGGAGGACTGATGAAGAGTT+TGG - chr2_3:66280408-66280427 Msa0306950:intron 45.0%
! TGGAAGAGAAATGCTTGCTG+GGG - chr2_3:66280428-66280447 Msa0306950:intron 45.0%
GAAGACGGCGAATGATAACA+GGG + chr2_3:66280458-66280477 None:intergenic 45.0%
TGAAGACGGCGAATGATAAC+AGG + chr2_3:66280459-66280478 None:intergenic 45.0%
!! TCGGAGGGAGTATTATGTAG+CGG + chr2_3:66280486-66280505 None:intergenic 45.0%
AAGCTGGACCCAAGTGTTTA+TGG - chr2_3:66280723-66280742 Msa0306950:intron 45.0%
! AGTGGCATAAGTCTTGGTGT+TGG + chr2_3:66281014-66281033 None:intergenic 45.0%
GCTCTTGAAGCCACATTTCA+AGG - chr2_3:66281395-66281414 Msa0306950:intron 45.0%
TACCTGCTAATCTGCTCAAG+AGG - chr2_3:66281559-66281578 Msa0306950:intron 45.0%
TACCTCTTGAGCAGATTAGC+AGG + chr2_3:66281564-66281583 None:intergenic 45.0%
CCATGAGGGCTATTTGAATC+TGG + chr2_3:66281736-66281755 None:intergenic 45.0%
CCAGATTCAAATAGCCCTCA+TGG - chr2_3:66281733-66281752 Msa0306950:intron 45.0%
!!! GACTACCCTTTTGCTGTTGA+TGG - chr2_3:66281775-66281794 Msa0306950:intron 45.0%
!!! CCCTTTTGCTGTTGATGGAT+TGG - chr2_3:66281780-66281799 Msa0306950:intron 45.0%
ACTATGAACTCCAACTCTGG+TGG - chr2_3:66281881-66281900 Msa0306950:CDS 45.0%
TGGAAAGAAGTCCGCAATGA+GGG - chr2_3:66281901-66281920 Msa0306950:CDS 45.0%
GTCATGGCGACTTAAAGGAT+AGG - chr2_3:66281923-66281942 Msa0306950:CDS 45.0%
GCGACTTAAAGGATAGGTCA+TGG - chr2_3:66281929-66281948 Msa0306950:CDS 45.0%
TCGGTAGGTAACCTGCATAA+GGG + chr2_3:66282053-66282072 None:intergenic 45.0%
TTCGGTAGGTAACCTGCATA+AGG + chr2_3:66282054-66282073 None:intergenic 45.0%
TTACCTACCGAATCGTCCAA+CGG - chr2_3:66282062-66282081 Msa0306950:CDS 45.0%
GACTCAAGCTCTTCATACTC+TGG + chr2_3:66282120-66282139 None:intergenic 45.0%
GCTCAGTTCCAAACTCTTCT+AGG - chr2_3:66282174-66282193 Msa0306950:intron 45.0%
GACTTCAGATGCTGAACCAT+TGG - chr2_3:66282272-66282291 Msa0306950:intron 45.0%
AATCGCTTGAATGCTGCCAA+TGG + chr2_3:66282291-66282310 None:intergenic 45.0%
! GCGATTTTCACAGAAGCTGT+TGG - chr2_3:66282305-66282324 Msa0306950:intron 45.0%
!! CAGAGGTATTGGGAAACAGA+AGG + chr2_3:66282410-66282429 None:intergenic 45.0%
ACCCTCCCTAGAATAATCAG+AGG + chr2_3:66282427-66282446 None:intergenic 45.0%
! TCTGATTATTCTAGGGAGGG+TGG - chr2_3:66282426-66282445 Msa0306950:intron 45.0%
GGACACGATCCAAACATATG+TGG - chr2_3:66282595-66282614 Msa0306950:CDS 45.0%
!! AACAAAATAAATATAAATAT+AGG - chr2_3:66277570-66277589 Msa0306950:CDS 5.0%
!! ATGATTAATATTAAAAAAAA+AGG + chr2_3:66277876-66277895 None:intergenic 5.0%
!! TTTCATTAATTAATTAATAT+TGG - chr2_3:66280359-66280378 Msa0306950:intron 5.0%
!!! TCATTTTTATAAATTATTAT+CGG - chr2_3:66282633-66282652 Msa0306950:CDS 5.0%
! AGTGTTACTGCTCCTGATCC+AGG - chr2_3:66276392-66276411 Msa0306950:three_prime_UTR 50.0%
GCAAGGAGAGTGGAAAAACC+TGG + chr2_3:66276413-66276432 None:intergenic 50.0%
GAAAAGTGGCATGCTTGGAG+AGG - chr2_3:66276893-66276912 Msa0306950:CDS 50.0%
CTGGAACTCCCATCTTCTCA+TGG + chr2_3:66276987-66277006 None:intergenic 50.0%
CATGAGAAGATGGGAGTTCC+AGG - chr2_3:66276985-66277004 Msa0306950:CDS 50.0%
CGTGTCCTGGAATGTCATCT+AGG + chr2_3:66277065-66277084 None:intergenic 50.0%
AAAGTTACAGGACCGTGTCC+TGG + chr2_3:66277078-66277097 None:intergenic 50.0%
TCTTCTCTCAACTTGCGCAG+TGG + chr2_3:66279667-66279686 None:intergenic 50.0%
TTGCTACCCTCCGTGGTAAA+GGG - chr2_3:66279692-66279711 Msa0306950:intron 50.0%
GACTTGGGAACTCCAGATGA+TGG - chr2_3:66279766-66279785 Msa0306950:intron 50.0%
GTTCTTCCTCGACGTGGATA+AGG + chr2_3:66279835-66279854 None:intergenic 50.0%
TTCACTCAAATCCGTCGCTC+AGG - chr2_3:66280063-66280082 Msa0306950:intron 50.0%
TGGAAGCAAAACCTGAGCGA+CGG + chr2_3:66280077-66280096 None:intergenic 50.0%
TATGCAAAGGTCCACTTGGG+AGG + chr2_3:66280183-66280202 None:intergenic 50.0%
CTTTGATCACGTCAGGCACA+GGG + chr2_3:66280282-66280301 None:intergenic 50.0%
TGATGGCACATTGAAGCCAC+TGG - chr2_3:66281057-66281076 Msa0306950:intron 50.0%
TGTTGTTCGCCTTGTGGATG+AGG + chr2_3:66281100-66281119 None:intergenic 50.0%
CATCCACAAGGCGAACAACA+TGG - chr2_3:66281100-66281119 Msa0306950:intron 50.0%
GCTGCTACTCCTTCATGTGA+TGG + chr2_3:66281148-66281167 None:intergenic 50.0%
!! TCATCGGTTCCCTCTACATG+AGG + chr2_3:66281627-66281646 None:intergenic 50.0%
GGACTTCTTTCCACCAGAGT+TGG + chr2_3:66281894-66281913 None:intergenic 50.0%
GTGGAAAGAAGTCCGCAATG+AGG - chr2_3:66281900-66281919 Msa0306950:CDS 50.0%
TGAGGGTCATGGCGACTTAA+AGG - chr2_3:66281918-66281937 Msa0306950:CDS 50.0%
!! TAACCGTTGGACGATTCGGT+AGG + chr2_3:66282068-66282087 None:intergenic 50.0%
CGACTAACCGTTGGACGATT+CGG + chr2_3:66282072-66282091 None:intergenic 50.0%
! ATCGTCCAACGGTTAGTCGT+AGG - chr2_3:66282073-66282092 Msa0306950:CDS 50.0%
CGTAGGTTTATGCCTGAGCA+AGG - chr2_3:66282090-66282109 Msa0306950:CDS 50.0%
TACTCTGGTGTACCTTGCTC+AGG + chr2_3:66282105-66282124 None:intergenic 50.0%
GTCTAGGCATTCGACTGAAG+AGG - chr2_3:66282218-66282237 Msa0306950:intron 50.0%
AAGTGGCATGCTTGGAGAGG+TGG - chr2_3:66276896-66276915 Msa0306950:CDS 55.0%
AGTGGCTCCGGTGTATCACA+TGG + chr2_3:66279649-66279668 None:intergenic 55.0%
!! GAAGAACTTGCTACCCTCCG+TGG - chr2_3:66279685-66279704 Msa0306950:intron 55.0%
CTTGCTACCCTCCGTGGTAA+AGG - chr2_3:66279691-66279710 Msa0306950:intron 55.0%
ACCCTCCGTGGTAAAGGGAT+TGG - chr2_3:66279697-66279716 Msa0306950:intron 55.0%
CCCAATCCCTTTACCACGGA+GGG + chr2_3:66279701-66279720 None:intergenic 55.0%
CCCTCCGTGGTAAAGGGATT+GGG - chr2_3:66279698-66279717 Msa0306950:intron 55.0%
TCCCAATCCCTTTACCACGG+AGG + chr2_3:66279702-66279721 None:intergenic 55.0%
! CGACTAGTTCTTCCTCGACG+TGG + chr2_3:66279841-66279860 None:intergenic 55.0%
CCTTTGATCACGTCAGGCAC+AGG + chr2_3:66280283-66280302 None:intergenic 55.0%
CCTGTGCCTGACGTGATCAA+AGG - chr2_3:66280280-66280299 Msa0306950:intron 55.0%
ATTTCCTCCTGCCAGCAAGC+TGG - chr2_3:66280707-66280726 Msa0306950:intron 55.0%
AACACTTGGGTCCAGCTTGC+TGG + chr2_3:66280721-66280740 None:intergenic 55.0%
GCTCCATGTTGTTCGCCTTG+TGG + chr2_3:66281106-66281125 None:intergenic 55.0%
TTTAGCCAACTGCCACACGG+TGG + chr2_3:66281170-66281189 None:intergenic 55.0%
CGCTTTAGCCAACTGCCACA+CGG + chr2_3:66281173-66281192 None:intergenic 55.0%
GAAGTCCGCAATGAGGGTCA+TGG - chr2_3:66281907-66281926 Msa0306950:CDS 55.0%
AGTCGCCATGACCCTCATTG+CGG + chr2_3:66281915-66281934 None:intergenic 55.0%
! GAGGGTGGACTCACTGGTAA+GGG - chr2_3:66282441-66282460 Msa0306950:intron 55.0%
CTCAACTTGCGCAGTGGCTC+CGG + chr2_3:66279661-66279680 None:intergenic 60.0%
CGTCAGGCACAGGGAATCTG+AGG + chr2_3:66280273-66280292 None:intergenic 60.0%
AAGGAGTAGCAGCCACCGTG+TGG - chr2_3:66281155-66281174 Msa0306950:intron 60.0%
! TCTAGGGAGGGTGGACTCAC+TGG - chr2_3:66282435-66282454 Msa0306950:intron 60.0%
! GGAGGGTGGACTCACTGGTA+AGG - chr2_3:66282440-66282459 Msa0306950:intron 60.0%
!! CTTGGGTCCAGCTTGCTGGC+AGG + chr2_3:66280717-66280736 None:intergenic 65.0%
AGCAGCCACCGTGTGGCAGT+TGG - chr2_3:66281162-66281181 Msa0306950:intron 65.0%
!! GGGTCCAGCTTGCTGGCAGG+AGG + chr2_3:66280714-66280733 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 66275978 66283022 66275978 ID=Msa0306950;Name=Msa0306950
chr2_3 mRNA 66275978 66283022 66275978 ID=Msa0306950-mRNA-1;Parent=Msa0306950;Name=Msa0306950-mRNA-1;_AED=0.04;_eAED=0.04;_QI=89|1|1|1|0.88|0.8|10|534|856
chr2_3 exon 66275978 66277280 66275978 ID=Msa0306950-mRNA-1:exon:22031;Parent=Msa0306950-mRNA-1
chr2_3 exon 66277420 66277683 66277420 ID=Msa0306950-mRNA-1:exon:22030;Parent=Msa0306950-mRNA-1
chr2_3 exon 66277761 66278065 66277761 ID=Msa0306950-mRNA-1:exon:22029;Parent=Msa0306950-mRNA-1
chr2_3 exon 66278188 66278295 66278188 ID=Msa0306950-mRNA-1:exon:22028;Parent=Msa0306950-mRNA-1
chr2_3 exon 66278521 66278606 66278521 ID=Msa0306950-mRNA-1:exon:22027;Parent=Msa0306950-mRNA-1
chr2_3 exon 66278699 66279037 66278699 ID=Msa0306950-mRNA-1:exon:22026;Parent=Msa0306950-mRNA-1
chr2_3 exon 66279123 66279363 66279123 ID=Msa0306950-mRNA-1:exon:22025;Parent=Msa0306950-mRNA-1
chr2_3 exon 66281836 66282131 66281836 ID=Msa0306950-mRNA-1:exon:22024;Parent=Msa0306950-mRNA-1
chr2_3 exon 66282587 66282786 66282587 ID=Msa0306950-mRNA-1:exon:22023;Parent=Msa0306950-mRNA-1
chr2_3 exon 66282971 66283022 66282971 ID=Msa0306950-mRNA-1:exon:22022;Parent=Msa0306950-mRNA-1
chr2_3 five_prime_UTR 66282971 66283022 66282971 ID=Msa0306950-mRNA-1:five_prime_utr;Parent=Msa0306950-mRNA-1
chr2_3 five_prime_UTR 66282750 66282786 66282750 ID=Msa0306950-mRNA-1:five_prime_utr;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66282587 66282749 66282587 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66281836 66282131 66281836 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66279123 66279363 66279123 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66278699 66279037 66278699 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66278521 66278606 66278521 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66278188 66278295 66278188 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66277761 66278065 66277761 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66277420 66277683 66277420 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 CDS 66276512 66277280 66276512 ID=Msa0306950-mRNA-1:cds;Parent=Msa0306950-mRNA-1
chr2_3 three_prime_UTR 66275978 66276511 66275978 ID=Msa0306950-mRNA-1:three_prime_utr;Parent=Msa0306950-mRNA-1
Gene Sequence

>Msa0306950

ATGGAGATGAATTACAAAAAAAGGGTTAGAGGGAAAGTGGTTTTAATGAAGAAAAGCTTGTTGGATTTCCATGACATCAAATCAAACGTTCTTGATCGAATTGATGAGTTTTTGGGCAAGGGTGTTTCACTTCAGCTCATTAGTGTTACTGCTCCTGATCCAGCAAAGGGACTGAAAGGGAAACATGGAAAAGTGGCATGCTTGGAGAGGTGGATGTCAAGCATATCATCATTGACAACAGCTACAGACACAGAATTCTCAGTTACATTTGATTGGGACCATGAGAAGATGGGAGTTCCAGGAGCTTTCATAATCAGAAATAATCACCATAGCCAATTTTACCTCAAGACAGTAACCCTAGATGACATTCCAGGACACGGTCCTGTAACTTTTGTTTGCAACTCTTGGGTTTACCCTACTCATCGTTACACACATGATCGTGTTTTCTTTGCAAACAAGGCTTATCTTCCATGTGATACACCGGAGCCACTGCGCAAGTTGAGAGAAGAAGAACTTGCTACCCTCCGTGGTAAAGGGATTGGGAAACTTAATGAGTGGGATAGAGTGTATGACTATGCATGCTACAATGACTTGGGAACTCCAGATGATGGTCCAGATTATGCACGTCCTGTTATTGGTGGATCAGAAAAGTTTCCTTATCCACGTCGAGGAAGAACTAGTCGTCCACATACCAAAACAGATCCTAAAACTGAGTCAAGATTGCATCTCCTGAATCTAAACATTTATGTTCCAAGAGATGAACAGTTTGGTCATGTAAAGTTTTCAGACTTTCTAGCTTATTCACTCAAATCCGTCGCTCAGGTTTTGCTTCCAGAGCTTAGATCTCTGTGTGACAAAACTATTAATGAGTTTGATACTTTCCAAGATGTACTTGATATTTATGAAGGAAGTTTTAACCTCCCAAGTGGACCTTTGCATAGTAAAATTAGAGACCTTATTCCTTATGAGATTTTTAGAGAACTTGTTAGGAATGATGGTGAGAAATTCCTCAGATTCCCTGTGCCTGACGTGATCAAAGCTAGTAAGACTGCATGGAGGACTGATGAAGAGTTTGGAAGAGAAATGCTTGCTGGGGTTAACCCTGTTATCATTCGCCGTCTTCAAGAATTTCCTCCTGCCAGCAAGCTGGACCCAAGTGTTTATGGAGACCAAAATAGTTCCATCCAAGCAAAGCACATAGAAAATAGTTTAGATGGGCTTACAATAGATGAGGCTCTTGAAAGTGATAAACTCTATATATTAGATCATCATGATGCTCTGATGCCATACATAAGTAGAATAAACTCTACCAACACCAAGACTTATGCCACTAGAACACTCCTGTTTCTACAAGATGATGGCACATTGAAGCCACTGGCTATCGAATTAAGCTTACCTCATCCACAAGGCGAACAACATGGAGCTGTCAGTAAAGTTTTCACTCCATCACATGAAGGAGTAGCAGCCACCGTGTGGCAGTTGGCTAAAGCGTATGCTGCTGTGAATGATTCAGGATATCATCAACTAGTTAGCCATTGGTTATTTACTCATGCAGTGATTGAACCATTTATAATAGCTACAAACAGACAACTGAGTCTTCTTCATCCAATTCATAAGCTCTTGAAGCCACATTTCAAGGATACAATGCATATAAATGCCTTAGCTAGGCATACACTTATCAATGCTGGAGGGGTACTAGAGAAAACAGTTTTCCCTGGTAAATTTGCATTGGAAATGTCAGCTGTTGTATATAAAAATTGGGTATTCACTGAACAAGCACTACCTGCTAATCTGCTCAAGAGAGGCATAGCAGTTCCAGATTCAAATAGCCCTCATGGACTAAAACTTATGATAGAAGACTACCCTTTTGCTGTTGATGGATTGGAAATATGGGATGCAATTGAAACTTGGGTGAGTGAATATTGTAATTTCTACTATACATCTGATGACATGATTGAGAATGACTATGAACTCCAACTCTGGTGGAAAGAAGTCCGCAATGAGGGTCATGGCGACTTAAAGGATAGGTCATGGTGGCCACAAATGAAGACTAGAATTGAGCTCATACAATCATGCACCATTATTATATGGGTGGCTTCTGCTTTTCATGCAGCTGTGAACTTTGGACAATACCCTTATGCAGGTTACCTACCGAATCGTCCAACGGTTAGTCGTAGGTTTATGCCTGAGCAAGGTACACCAGAGTATGAAGAGCTTGAGTCAGATCCTGAATTAGCATTCTTAAAAACAATCACAGCTCAGTTCCAAACTCTTCTAGGTGTGTCATTGATAGAAGTTCTGTCTAGGCATTCGACTGAAGAGGTTTATCTTGGACAGACAGTAAACCCTAATTGGACTTCAGATGCTGAACCATTGGCAGCATTCAAGCGATTTTCACAGAAGCTGTTGGAGATTGAGAATAACATCATGAAAAGGAACAAGAACCCAAGTTTGAAGAACAGAAACGGGCCAGTGAAATTGCCTTATACCCTTCTGTTTCCCAATACCTCTGATTATTCTAGGGAGGGTGGACTCACTGGTAAGGGAATTCCCAACAGCATATCCATCTGA
Protein sequence

>Msa0306950

MEMNYKKRVRGKVVLMKKSLLDFHDIKSNVLDRIDEFLGKGVSLQLISVTAPDPAKGLKGKHGKVACLERWMSSISSLTTATDTEFSVTFDWDHEKMGVPGAFIIRNNHHSQFYLKTVTLDDIPGHGPVTFVCNSWVYPTHRYTHDRVFFANKAYLPCDTPEPLRKLREEELATLRGKGIGKLNEWDRVYDYACYNDLGTPDDGPDYARPVIGGSEKFPYPRRGRTSRPHTKTDPKTESRLHLLNLNIYVPRDEQFGHVKFSDFLAYSLKSVAQVLLPELRSLCDKTINEFDTFQDVLDIYEGSFNLPSGPLHSKIRDLIPYEIFRELVRNDGEKFLRFPVPDVIKASKTAWRTDEEFGREMLAGVNPVIIRRLQEFPPASKLDPSVYGDQNSSIQAKHIENSLDGLTIDEALESDKLYILDHHDALMPYISRINSTNTKTYATRTLLFLQDDGTLKPLAIELSLPHPQGEQHGAVSKVFTPSHEGVAATVWQLAKAYAAVNDSGYHQLVSHWLFTHAVIEPFIIATNRQLSLLHPIHKLLKPHFKDTMHINALARHTLINAGGVLEKTVFPGKFALEMSAVVYKNWVFTEQALPANLLKRGIAVPDSNSPHGLKLMIEDYPFAVDGLEIWDAIETWVSEYCNFYYTSDDMIENDYELQLWWKEVRNEGHGDLKDRSWWPQMKTRIELIQSCTIIIWVASAFHAAVNFGQYPYAGYLPNRPTVSRRFMPEQGTPEYEELESDPELAFLKTITAQFQTLLGVSLIEVLSRHSTEEVYLGQTVNPNWTSDAEPLAAFKRFSQKLLEIENNIMKRNKNPSLKNRNGPVKLPYTLLFPNTSDYSREGGLTGKGIPNSISI*