AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1457070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457070 MtrunA17_Chr8g0392711 99.000 100 1 0 1 100 1 100 1.18e-66 212
Msa1457070 MtrunA17_Chr6g0451281 48.864 88 38 2 11 94 21 105 8.69e-20 84.3
Msa1457070 MtrunA17_Chr6g0451291 52.239 67 25 2 32 94 14 77 2.49e-14 68.6
Msa1457070 MtrunA17_Chr6g0451261 50.000 66 32 1 32 96 310 375 2.46e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457070 AT1G73680.2 54.808 104 47 0 1 104 1 104 1.22e-34 126
Msa1457070 AT1G73680.1 54.808 104 47 0 1 104 1 104 1.23e-34 126
Msa1457070 AT3G01420.1 50.000 86 42 1 10 94 15 100 3.39e-21 88.6

Find 143 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATTCATTTGGAAATATTT+TGG 0.100271 tig0038342:+12809 Msa1457070:three_prime_UTR
AAATCTTCCCACTTACTAAT+TGG 0.152032 tig0038342:-13520 None:intergenic
TATAGAGGTATGTATTTCTT+AGG 0.222425 tig0038342:-13973 None:intergenic
GGAGCAAATGTTAGTATCTA+TGG 0.226768 tig0038342:+13221 Msa1457070:three_prime_UTR
TCCCTGAGATGACTGAAAAT+TGG 0.233453 tig0038342:+13905 Msa1457070:three_prime_UTR
GGGCAATATACTTGGGAATT+AGG 0.236418 tig0038342:+10988 Msa1457070:CDS
GGTATCAAAGAGGGTCATTT+TGG 0.261310 tig0038342:-10773 None:intergenic
CATAAGCTTCCAGTGTTGTT+GGG 0.270454 tig0038342:+10966 Msa1457070:CDS
CATTTGTCTTCTCCTGTTGT+AGG 0.275032 tig0038342:-12969 None:intergenic
AAGAGTTCACGAGTGTTTAT+AGG 0.276589 tig0038342:+12901 Msa1457070:three_prime_UTR
TTTCCTATCATTTCTGTCAT+TGG 0.278143 tig0038342:-13165 None:intergenic
AACTCTTCAGTAAGCGAATA+TGG 0.278801 tig0038342:-12885 None:intergenic
TTTCTTTATCTTTGTGATCA+TGG 0.279891 tig0038342:+13669 Msa1457070:three_prime_UTR
ACCAAGGAGTCCTAATGTTT+TGG 0.297547 tig0038342:-11846 None:intergenic
GGTATGTATTTCTTAGGATT+TGG 0.300998 tig0038342:-13967 None:intergenic
CATGTGGTGCTGTTACTTTA+TGG 0.301909 tig0038342:+13253 Msa1457070:three_prime_UTR
AAGAAATTCAAAGATTCATT+TGG 0.309732 tig0038342:+12798 Msa1457070:three_prime_UTR
ACCTTCGTTTGTGTATGTTT+TGG 0.313730 tig0038342:-13830 None:intergenic
GGCTCTTCACACATGAAGTT+TGG 0.314198 tig0038342:+11820 Msa1457070:three_prime_UTR
AGGGATGGAAGTGTGATATA+TGG 0.316910 tig0038342:+12210 Msa1457070:intron
TCAACATGATAGCTTGTTCA+TGG 0.341489 tig0038342:+11359 Msa1457070:CDS
TCCAGTTGACATGGCTACTA+TGG 0.351321 tig0038342:+13338 Msa1457070:three_prime_UTR
TCTAAATCAATGGAAGAGTA+TGG 0.354074 tig0038342:-14064 None:intergenic
TAGTGGATTAGTTGGTCTTA+AGG 0.355480 tig0038342:+12842 Msa1457070:three_prime_UTR
TACAGTTCATGATTCATGAT+TGG 0.365374 tig0038342:+11383 Msa1457070:exon
AGCTTCGAGGCCACCAGTGC+AGG 0.374076 tig0038342:-11298 None:intergenic
GGCTGGTTATTCCCTTCTGC+AGG 0.375799 tig0038342:+12359 Msa1457070:three_prime_UTR
AGTTTGGCTTCCAAAACATT+AGG 0.378367 tig0038342:+11836 Msa1457070:three_prime_UTR
AATCTTCCCACTTACTAATT+GGG 0.380096 tig0038342:-13519 None:intergenic
CTCATTGCACATGATATTGA+TGG 0.387523 tig0038342:+13300 Msa1457070:three_prime_UTR
TGATTGGATTGATCATTTAG+AGG 0.390749 tig0038342:+11399 Msa1457070:exon
CTACAGTCCAATCAATTGTA+TGG 0.403949 tig0038342:-12611 None:intergenic
CTACCGATCAAGTGATCGTC+GGG 0.415701 tig0038342:-11119 None:intergenic
ACTCTATAGGTATGCAAGAT+TGG 0.417959 tig0038342:+12563 Msa1457070:three_prime_UTR
ATTTCGAACATCACCGGATA+CGG 0.419806 tig0038342:-12331 None:intergenic
TCCATAGTAGCCATGTCAAC+TGG 0.420756 tig0038342:-13339 None:intergenic
TAGTTTATAGAGATAGAGAA+AGG 0.421895 tig0038342:+13452 Msa1457070:intron
AACACTAACATAGAAAAGTA+TGG 0.422519 tig0038342:-10794 None:intergenic
TGGCATCCATGAGGATCAAC+TGG 0.432200 tig0038342:+12658 Msa1457070:three_prime_UTR
AAGACTAAGAAATTTCAAAC+TGG 0.433686 tig0038342:+11799 Msa1457070:three_prime_UTR
TTGATGATGAGCAACTCTAT+AGG 0.440552 tig0038342:+12550 Msa1457070:three_prime_UTR
TCTTTGTGATCATGGCTTCA+AGG 0.441291 tig0038342:+13677 Msa1457070:three_prime_UTR
AGTTTATAGAGATAGAGAAA+GGG 0.446296 tig0038342:+13453 Msa1457070:intron
GGGTGGTTGCACGTGCCTGC+CGG 0.447014 tig0038342:-11098 None:intergenic
CCCTGGTCTCCAACCTCTTG+TGG 0.448983 tig0038342:+10750 Msa1457070:CDS
GCCACAAGAGGTTGGAGACC+AGG 0.457452 tig0038342:-10751 None:intergenic
TGAAAGTGGTTCTAAATCAA+TGG 0.459904 tig0038342:-14074 None:intergenic
AGTTGCTCATCATCAAAATC+AGG 0.460874 tig0038342:-12543 None:intergenic
TCCAAAACATTAGGACTCCT+TGG 0.461125 tig0038342:+11845 Msa1457070:three_prime_UTR
TATGGAACTCCATGATCTCT+TGG 0.461308 tig0038342:-12867 None:intergenic
CTTTCTTGCTAGAAGCTTCG+AGG 0.462793 tig0038342:-11311 None:intergenic
TCATTTAGAGGACACTGAAC+AGG 0.462942 tig0038342:+11411 Msa1457070:three_prime_UTR
CCGGTGATGTTCGAAATTCA+TGG 0.466050 tig0038342:+12337 Msa1457070:three_prime_UTR
GCATAAGCTTCCAGTGTTGT+TGG 0.466181 tig0038342:+10965 Msa1457070:CDS
CTTAAGGAGCCAAGAGATCA+TGG 0.466526 tig0038342:+12858 Msa1457070:three_prime_UTR
CGAAACATCAAGCCTACAAC+AGG 0.469821 tig0038342:+12957 Msa1457070:three_prime_UTR
GGGATGGAAGTGTGATATAT+GGG 0.472264 tig0038342:+12211 Msa1457070:intron
GAGGCCACCAGTGCAGGGTG+AGG 0.479639 tig0038342:-11292 None:intergenic
TACAATCTGTTGCATGTTGG+AGG 0.481984 tig0038342:+11029 Msa1457070:CDS
CCCGAGCTTAGTGGATTAGT+TGG 0.482142 tig0038342:+12834 Msa1457070:three_prime_UTR
ATAAGCTTCCAGTGTTGTTG+GGG 0.485280 tig0038342:+10967 Msa1457070:CDS
CGAACAAAACATTCTGAAAG+TGG 0.486067 tig0038342:-14088 None:intergenic
AGAAGGGAATGAGCAGAGTA+AGG 0.488277 tig0038342:+12241 Msa1457070:three_prime_UTR
TTTCGAAGGACAAGCTCCTC+AGG 0.489212 tig0038342:-12939 None:intergenic
ACCAACTAATCCACTAAGCT+CGG 0.494691 tig0038342:-12835 None:intergenic
GTTTATAGAGATAGAGAAAG+GGG 0.495286 tig0038342:+13454 Msa1457070:intron
AAACTGAAGATCTCAGAAGA+TGG 0.498138 tig0038342:+12279 Msa1457070:three_prime_UTR
GTAGCCATGTCAACTGGATC+AGG 0.498191 tig0038342:-13333 None:intergenic
GTGCCAATGACAGAAATGAT+AGG 0.502812 tig0038342:+13162 Msa1457070:three_prime_UTR
AGAAAAGTATGGTATCAAAG+AGG 0.504773 tig0038342:-10783 None:intergenic
TGATGATGATGTTGAGAAGC+TGG 0.506358 tig0038342:+13585 Msa1457070:three_prime_UTR
CTTTGATCTTCTTCTCAGCA+TGG 0.506564 tig0038342:-13624 None:intergenic
ATGAGGTTCCTTAGCCATGT+TGG 0.507797 tig0038342:-13282 None:intergenic
GATGTTCGAAATTCATGGGC+TGG 0.508622 tig0038342:+12342 Msa1457070:three_prime_UTR
AGACCCTCACCCTGCACTGG+TGG 0.509737 tig0038342:+11288 Msa1457070:CDS
CTTTGAAGGATGTGATTGAC+AGG 0.509857 tig0038342:+13878 Msa1457070:three_prime_UTR
GAGAAGCTGGACTTGATAGT+TGG 0.512234 tig0038342:+13598 Msa1457070:three_prime_UTR
CAGCCGCTTGAGTAACCATC+AGG 0.514618 tig0038342:-11751 None:intergenic
ATAGAGAAAGGGGAGTTGCA+AGG 0.518453 tig0038342:+13464 Msa1457070:three_prime_UTR
GACTTACCAGTTGATCCTCA+TGG 0.521146 tig0038342:-12664 None:intergenic
GTTAGACCCTCACCCTGCAC+TGG 0.526913 tig0038342:+11285 Msa1457070:CDS
TTTCGAACATCACCGGATAC+GGG 0.528141 tig0038342:-12330 None:intergenic
GGAACTTTCCAACATGGCTA+AGG 0.528495 tig0038342:+13274 Msa1457070:three_prime_UTR
TTGGAGACCAGGGTGAATGA+AGG 0.531161 tig0038342:-10740 None:intergenic
CGTTACAATCTGTTGCATGT+TGG 0.531167 tig0038342:+11026 Msa1457070:CDS
GAGAAAGGTATTCCCGTATC+CGG 0.532581 tig0038342:+12318 Msa1457070:three_prime_UTR
GAGCAAATGTTAGTATCTAT+GGG 0.533313 tig0038342:+13222 Msa1457070:three_prime_UTR
TAATAAACAAAGCCTGCAGA+AGG 0.533377 tig0038342:-12371 None:intergenic
TAATGATCCCAATTAGTAAG+TGG 0.534721 tig0038342:+13512 Msa1457070:three_prime_UTR
AACTGAAGATCTCAGAAGAT+GGG 0.535040 tig0038342:+12280 Msa1457070:three_prime_UTR
CTTCTTGAGCATGATGAGAA+AGG 0.538966 tig0038342:+12303 Msa1457070:three_prime_UTR
AAACAAAACAGAGTCTTTGA+AGG 0.539259 tig0038342:+13864 Msa1457070:three_prime_UTR
GCTTCGAGGCCACCAGTGCA+GGG 0.541610 tig0038342:-11297 None:intergenic
CTTTATGGAACTTTCCAACA+TGG 0.544514 tig0038342:+13268 Msa1457070:three_prime_UTR
TCTACACCCTTCATTCACCC+TGG 0.544687 tig0038342:+10733 Msa1457070:CDS
ATGCTGAGAAGAAGATCAAA+GGG 0.545504 tig0038342:+13626 Msa1457070:three_prime_UTR
AGGCCACCAGTGCAGGGTGA+GGG 0.545996 tig0038342:-11291 None:intergenic
CTCAAGTGCATTCTCTGTGT+GGG 0.546472 tig0038342:+13936 Msa1457070:three_prime_UTR
CGGTGATGTTCGAAATTCAT+GGG 0.553151 tig0038342:+12338 Msa1457070:three_prime_UTR
TTGTAGGCTTGATGTTTCGA+AGG 0.557809 tig0038342:-12953 None:intergenic
AGAAAGAGCTTCATAGACAC+AGG 0.560247 tig0038342:+11328 Msa1457070:CDS
CATGCTGAGAAGAAGATCAA+AGG 0.562475 tig0038342:+13625 Msa1457070:three_prime_UTR
GGGGCTTATCTCAAATATAG+AGG 0.563891 tig0038342:-13988 None:intergenic
ATATATGGGAACAATGAGAA+GGG 0.571299 tig0038342:+12225 Msa1457070:three_prime_UTR
GATATATGGGAACAATGAGA+AGG 0.571690 tig0038342:+12224 Msa1457070:three_prime_UTR
CCATGAATTTCGAACATCAC+CGG 0.573382 tig0038342:-12337 None:intergenic
TGGAGACCAGGGTGAATGAA+GGG 0.574228 tig0038342:-10739 None:intergenic
GAAAAGTATGGTATCAAAGA+GGG 0.584808 tig0038342:-10782 None:intergenic
TATGCATATCGTACTCCGGC+AGG 0.593657 tig0038342:+11083 Msa1457070:CDS
AATGATCCCAATTAGTAAGT+GGG 0.596335 tig0038342:+13513 Msa1457070:three_prime_UTR
AAAACATTAGGACTCCTTGG+TGG 0.596480 tig0038342:+11848 Msa1457070:three_prime_UTR
GCTCAAGTGCATTCTCTGTG+TGG 0.597626 tig0038342:+13935 Msa1457070:three_prime_UTR
CACCCCGACGATCACTTGAT+CGG 0.601063 tig0038342:+11116 Msa1457070:CDS
CCAACTAATCCACTAAGCTC+GGG 0.606288 tig0038342:-12834 None:intergenic
CCACAAGAGGTTGGAGACCA+GGG 0.607968 tig0038342:-10750 None:intergenic
AGAGTAAGGACATTCAAAGA+GGG 0.611673 tig0038342:+12255 Msa1457070:three_prime_UTR
AAGGGTGTAGAGAAAAGAGA+AGG 0.612180 tig0038342:-10721 None:intergenic
CATCAATATCATGTGCAATG+AGG 0.613592 tig0038342:-13299 None:intergenic
AGATTTAACAGATGATCAAG+AGG 0.616215 tig0038342:+13537 Msa1457070:three_prime_UTR
GTGGAAATCAGTGCTCCTGA+TGG 0.623708 tig0038342:+11736 Msa1457070:three_prime_UTR
CAGAGTAAGGACATTCAAAG+AGG 0.629292 tig0038342:+12254 Msa1457070:three_prime_UTR
CAGAAATGATAGGAAAACAA+GGG 0.629712 tig0038342:+13172 Msa1457070:three_prime_UTR
ACAGAAATGATAGGAAAACA+AGG 0.633600 tig0038342:+13171 Msa1457070:three_prime_UTR
AATAAACAAAGCCTGCAGAA+GGG 0.635093 tig0038342:-12370 None:intergenic
GTTGACATGGCTACTATGGA+AGG 0.637307 tig0038342:+13342 Msa1457070:three_prime_UTR
GCTCCTGATGGTTACTCAAG+CGG 0.639000 tig0038342:+11748 Msa1457070:three_prime_UTR
TTGCATGTTGGAGGAGTGAG+TGG 0.640130 tig0038342:+11038 Msa1457070:CDS
CGATCAAGTGATCGTCGGGG+TGG 0.644828 tig0038342:-11115 None:intergenic
AAGACCTGATCCAGTTGACA+TGG 0.645059 tig0038342:+13329 Msa1457070:three_prime_UTR
ACTACCGATCAAGTGATCGT+CGG 0.652642 tig0038342:-11120 None:intergenic
TTGTGGACAAAATTGTGCTG+TGG 0.655463 tig0038342:+10943 Msa1457070:CDS
TCCAAAACATACACAAACGA+AGG 0.658132 tig0038342:+13829 Msa1457070:three_prime_UTR
GGTTATTGAAGCTCTCAAAG+AGG 0.662069 tig0038342:+13558 Msa1457070:three_prime_UTR
AGAAATGATAGGAAAACAAG+GGG 0.662137 tig0038342:+13173 Msa1457070:three_prime_UTR
AAGTAACAGCACCACATGGT+TGG 0.662343 tig0038342:-13248 None:intergenic
ACACTATGCATATCGTACTC+CGG 0.664405 tig0038342:+11079 Msa1457070:CDS
TAAGCTTCCAGTGTTGTTGG+GGG 0.664838 tig0038342:+10968 Msa1457070:CDS
CATAAAGTAACAGCACCACA+TGG 0.666274 tig0038342:-13252 None:intergenic
GATGCATGCACTCTTGCCTG+AGG 0.680891 tig0038342:+12923 Msa1457070:three_prime_UTR
AATTAAACTACTTACCACCA+AGG 0.695218 tig0038342:-11862 None:intergenic
GAAAGAGCTTCATAGACACA+GGG 0.708446 tig0038342:+11329 Msa1457070:CDS
TACCGATCAAGTGATCGTCG+GGG 0.754460 tig0038342:-11118 None:intergenic
TCTATGGGCTACCAACCATG+TGG 0.756430 tig0038342:+13237 Msa1457070:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATAAAAGAATTAAA+TGG - tig0038342:11206-11225 None:intergenic 10.0%
!!! CAAATAAAATTTGATTATTT+TGG + tig0038342:13725-13744 Msa1457070:intron 10.0%
!! TGATAATATTGAATTTATGT+AGG + tig0038342:10911-10930 Msa1457070:intron 15.0%
!! ATAAAAAATTCTTAACTCTT+GGG - tig0038342:13048-13067 None:intergenic 15.0%
!!! TATAATTGCATATGTTATTT+AGG + tig0038342:13139-13158 Msa1457070:intron 15.0%
!!! ATAATTGCATATGTTATTTA+GGG + tig0038342:13140-13159 Msa1457070:intron 15.0%
!!! ATCTTTTGAAAGAAATTTCA+TGG + tig0038342:10696-10715 Msa1457070:exon 20.0%
!! AAAAATTTGAAAGTCTTTAG+AGG - tig0038342:11778-11797 None:intergenic 20.0%
!!! TAGAGTTTACTATTGTTTTT+TGG + tig0038342:12174-12193 Msa1457070:intron 20.0%
!!! TTTTTGGTATGTGAATTATT+AGG + tig0038342:12190-12209 Msa1457070:intron 20.0%
!!! TTTTGGTATGTGAATTATTA+GGG + tig0038342:12191-12210 Msa1457070:intron 20.0%
!!! GTAAAACTTTCATTTTCTTT+TGG + tig0038342:12756-12775 Msa1457070:intron 20.0%
!! AAGAAATTCAAAGATTCATT+TGG + tig0038342:12798-12817 Msa1457070:three_prime_UTR 20.0%
!!! AGATTCATTTGGAAATATTT+TGG + tig0038342:12809-12828 Msa1457070:three_prime_UTR 20.0%
!!! GATTCATTTGGAAATATTTT+GGG + tig0038342:12810-12829 Msa1457070:three_prime_UTR 20.0%
!!! TATACTTTTCAAGTATTGAA+GGG - tig0038342:12995-13014 None:intergenic 20.0%
!! CATAAAAAATTCTTAACTCT+TGG - tig0038342:13049-13068 None:intergenic 20.0%
!!! AAAATTTGATTATTTTGGCT+TGG + tig0038342:13730-13749 Msa1457070:intron 20.0%
! AACACTAACATAGAAAAGTA+TGG - tig0038342:10797-10816 None:intergenic 25.0%
! GATAAAAGAATTAAATGGCT+TGG - tig0038342:11201-11220 None:intergenic 25.0%
! TCTATGTTAAACGAGAATAT+AGG + tig0038342:11468-11487 Msa1457070:intron 25.0%
! TCCAAAACCTTAATGTAATT+TGG + tig0038342:11673-11692 Msa1457070:intron 25.0%
!! TCCAAATTACATTAAGGTTT+TGG - tig0038342:11677-11696 None:intergenic 25.0%
! CTTAGATCCAAATTACATTA+AGG - tig0038342:11683-11702 None:intergenic 25.0%
! AAGACTAAGAAATTTCAAAC+TGG + tig0038342:11799-11818 Msa1457070:three_prime_UTR 25.0%
! CTTGTGAATGAAGATATTTA+AGG + tig0038342:11954-11973 Msa1457070:intron 25.0%
! TGTCAGTGTAAAAACTAAAA+AGG - tig0038342:12035-12054 None:intergenic 25.0%
!! TAACCACCTTTTAAATTTGA+TGG + tig0038342:12080-12099 Msa1457070:intron 25.0%
! GTTGAACCATCAAATTTAAA+AGG - tig0038342:12089-12108 None:intergenic 25.0%
!! TTTTCATCTGTTGTATAACT+TGG + tig0038342:12439-12458 Msa1457070:intron 25.0%
!!! TTTTTTTGTTCTTTGCTTAC+AGG + tig0038342:12512-12531 Msa1457070:intron 25.0%
! CAAAAATCCATACAATTGAT+TGG + tig0038342:12604-12623 Msa1457070:three_prime_UTR 25.0%
!! CTTAAAAACTGATACTCTTT+TGG + tig0038342:12638-12657 Msa1457070:three_prime_UTR 25.0%
!!! TGCATATGGATATATTTTGA+AGG + tig0038342:12687-12706 Msa1457070:intron 25.0%
!!! GTATACTTTTCAAGTATTGA+AGG - tig0038342:12996-13015 None:intergenic 25.0%
!!! GAAAACATTTTTTCATAGTG+TGG + tig0038342:13093-13112 Msa1457070:intron 25.0%
! GAAAAAAGGCTTTCAAAAAT+AGG + tig0038342:13195-13214 Msa1457070:three_prime_UTR 25.0%
! TAGTTTATAGAGATAGAGAA+AGG + tig0038342:13452-13471 Msa1457070:intron 25.0%
! AGTTTATAGAGATAGAGAAA+GGG + tig0038342:13453-13472 Msa1457070:intron 25.0%
! TTTCTTTATCTTTGTGATCA+TGG + tig0038342:13669-13688 Msa1457070:three_prime_UTR 25.0%
!! TATAGAGGTATGTATTTCTT+AGG - tig0038342:13976-13995 None:intergenic 25.0%
!! TTAACCAAACAATTTTTGTG+GGG - tig0038342:14010-14029 None:intergenic 25.0%
!! CTTAACCAAACAATTTTTGT+GGG - tig0038342:14011-14030 None:intergenic 25.0%
!! TCTTAACCAAACAATTTTTG+TGG - tig0038342:14012-14031 None:intergenic 25.0%
!! TTTTGTCTCAGTTTTAACAC+AGG - tig0038342:10676-10695 None:intergenic 30.0%
! GAAAAGTATGGTATCAAAGA+GGG - tig0038342:10785-10804 None:intergenic 30.0%
! AGAAAAGTATGGTATCAAAG+AGG - tig0038342:10786-10805 None:intergenic 30.0%
! TATGTAGGTGATACATTTTG+TGG + tig0038342:10926-10945 Msa1457070:intron 30.0%
TACAGTTCATGATTCATGAT+TGG + tig0038342:11383-11402 Msa1457070:exon 30.0%
TGATTGGATTGATCATTTAG+AGG + tig0038342:11399-11418 Msa1457070:exon 30.0%
AGCTATGTATGTTTAGATTC+GGG - tig0038342:11582-11601 None:intergenic 30.0%
CAGCTATGTATGTTTAGATT+CGG - tig0038342:11583-11602 None:intergenic 30.0%
AGCTGTATCTGATGTAAAAA+AGG + tig0038342:11598-11617 Msa1457070:intron 30.0%
GCTGTATCTGATGTAAAAAA+GGG + tig0038342:11599-11618 Msa1457070:intron 30.0%
!!! ACATTAAGGTTTTGGAGAAT+TGG - tig0038342:11669-11688 None:intergenic 30.0%
CATTATGCAAGAAATGCAAT+TGG - tig0038342:11706-11725 None:intergenic 30.0%
TGCATTTCTTGCATAATGTT+TGG + tig0038342:11708-11727 Msa1457070:intron 30.0%
! TCTTGCATAATGTTTGGAAT+AGG + tig0038342:11714-11733 Msa1457070:intron 30.0%
AATTAAACTACTTACCACCA+AGG - tig0038342:11865-11884 None:intergenic 30.0%
TTCATTCACAAGTGTTTACA+TGG - tig0038342:11946-11965 None:intergenic 30.0%
TTAAGGAACTGATGTAACAA+AGG + tig0038342:11971-11990 Msa1457070:intron 30.0%
TAAGGAACTGATGTAACAAA+GGG + tig0038342:11972-11991 Msa1457070:intron 30.0%
GAACCATCAAATTTAAAAGG+TGG - tig0038342:12086-12105 None:intergenic 30.0%
ATATATGGGAACAATGAGAA+GGG + tig0038342:12225-12244 Msa1457070:three_prime_UTR 30.0%
! AACTTTCATTTTCTTTTGGC+AGG + tig0038342:12760-12779 Msa1457070:intron 30.0%
TTTCCTATCATTTCTGTCAT+TGG - tig0038342:13168-13187 None:intergenic 30.0%
ACAGAAATGATAGGAAAACA+AGG + tig0038342:13171-13190 Msa1457070:three_prime_UTR 30.0%
CAGAAATGATAGGAAAACAA+GGG + tig0038342:13172-13191 Msa1457070:three_prime_UTR 30.0%
AGAAATGATAGGAAAACAAG+GGG + tig0038342:13173-13192 Msa1457070:three_prime_UTR 30.0%
AAGGCTTTCAAAAATAGGAA+TGG + tig0038342:13200-13219 Msa1457070:three_prime_UTR 30.0%
GAGCAAATGTTAGTATCTAT+GGG + tig0038342:13222-13241 Msa1457070:three_prime_UTR 30.0%
GTTTATAGAGATAGAGAAAG+GGG + tig0038342:13454-13473 Msa1457070:intron 30.0%
TAATGATCCCAATTAGTAAG+TGG + tig0038342:13512-13531 Msa1457070:three_prime_UTR 30.0%
AATGATCCCAATTAGTAAGT+GGG + tig0038342:13513-13532 Msa1457070:three_prime_UTR 30.0%
AATCTTCCCACTTACTAATT+GGG - tig0038342:13522-13541 None:intergenic 30.0%
AAATCTTCCCACTTACTAAT+TGG - tig0038342:13523-13542 None:intergenic 30.0%
AGATTTAACAGATGATCAAG+AGG + tig0038342:13537-13556 Msa1457070:three_prime_UTR 30.0%
!!! TATTTTGGCTTGGAATCTTA+TGG + tig0038342:13740-13759 Msa1457070:intron 30.0%
AAACAAAACAGAGTCTTTGA+AGG + tig0038342:13864-13883 Msa1457070:three_prime_UTR 30.0%
GGTATGTATTTCTTAGGATT+TGG - tig0038342:13970-13989 None:intergenic 30.0%
TCTAAATCAATGGAAGAGTA+TGG - tig0038342:14067-14086 None:intergenic 30.0%
!! TGAAAGTGGTTCTAAATCAA+TGG - tig0038342:14077-14096 None:intergenic 30.0%
!!! TTTTGAGGTATCAGAAAGAA+CGG - tig0038342:14194-14213 None:intergenic 30.0%
CTCCGACGACTTTAAATTAT+GGG + tig0038342:11171-11190 Msa1457070:intron 35.0%
TCCGACGACTTTAAATTATG+GGG + tig0038342:11172-11191 Msa1457070:intron 35.0%
! ACCCCATAATTTAAAGTCGT+CGG - tig0038342:11176-11195 None:intergenic 35.0%
!! TCAACATGATAGCTTGTTCA+TGG + tig0038342:11359-11378 Msa1457070:CDS 35.0%
!!! TAAGGTTTTGGAGAATTGGT+TGG - tig0038342:11665-11684 None:intergenic 35.0%
! TGCATAATGTTTGGAATAGG+TGG + tig0038342:11717-11736 Msa1457070:intron 35.0%
! AGTTTGGCTTCCAAAACATT+AGG + tig0038342:11836-11855 Msa1457070:three_prime_UTR 35.0%
! GAAGATTTAGTTCAGCAAAC+AGG + tig0038342:12128-12147 Msa1457070:intron 35.0%
AGTTCAGCAAACAGGATTAT+TGG + tig0038342:12136-12155 Msa1457070:intron 35.0%
GGTATGTGAATTATTAGGGA+TGG + tig0038342:12195-12214 Msa1457070:intron 35.0%
GATATATGGGAACAATGAGA+AGG + tig0038342:12224-12243 Msa1457070:three_prime_UTR 35.0%
AGAGTAAGGACATTCAAAGA+GGG + tig0038342:12255-12274 Msa1457070:three_prime_UTR 35.0%
AAACTGAAGATCTCAGAAGA+TGG + tig0038342:12279-12298 Msa1457070:three_prime_UTR 35.0%
AACTGAAGATCTCAGAAGAT+GGG + tig0038342:12280-12299 Msa1457070:three_prime_UTR 35.0%
AATAAACAAAGCCTGCAGAA+GGG - tig0038342:12373-12392 None:intergenic 35.0%
TAATAAACAAAGCCTGCAGA+AGG - tig0038342:12374-12393 None:intergenic 35.0%
AGTTGCTCATCATCAAAATC+AGG - tig0038342:12546-12565 None:intergenic 35.0%
!! TTGATGATGAGCAACTCTAT+AGG + tig0038342:12550-12569 Msa1457070:three_prime_UTR 35.0%
ACTCTATAGGTATGCAAGAT+TGG + tig0038342:12563-12582 Msa1457070:three_prime_UTR 35.0%
CTACAGTCCAATCAATTGTA+TGG - tig0038342:12614-12633 None:intergenic 35.0%
!! GGATATATTTTGAAGGAGAC+AGG + tig0038342:12694-12713 Msa1457070:intron 35.0%
! TCATTTTCTTTTGGCAGGTA+TGG + tig0038342:12765-12784 Msa1457070:intron 35.0%
! TTTTGGCAGGTATGGATTTT+TGG + tig0038342:12773-12792 Msa1457070:intron 35.0%
! TTTGGCAGGTATGGATTTTT+GGG + tig0038342:12774-12793 Msa1457070:intron 35.0%
!! TAGTGGATTAGTTGGTCTTA+AGG + tig0038342:12842-12861 Msa1457070:three_prime_UTR 35.0%
AACTCTTCAGTAAGCGAATA+TGG - tig0038342:12888-12907 None:intergenic 35.0%
AAGAGTTCACGAGTGTTTAT+AGG + tig0038342:12901-12920 Msa1457070:three_prime_UTR 35.0%
TAGGAAAACAAGGGGAAAAA+AGG + tig0038342:13181-13200 Msa1457070:three_prime_UTR 35.0%
GGAGCAAATGTTAGTATCTA+TGG + tig0038342:13221-13240 Msa1457070:three_prime_UTR 35.0%
CTTTATGGAACTTTCCAACA+TGG + tig0038342:13268-13287 Msa1457070:three_prime_UTR 35.0%
CATCAATATCATGTGCAATG+AGG - tig0038342:13302-13321 None:intergenic 35.0%
CTCATTGCACATGATATTGA+TGG + tig0038342:13300-13319 Msa1457070:three_prime_UTR 35.0%
! TACAAAAGCATGCTTGCAAA+AGG - tig0038342:13383-13402 None:intergenic 35.0%
ATGCTGAGAAGAAGATCAAA+GGG + tig0038342:13626-13645 Msa1457070:three_prime_UTR 35.0%
! TGGAATCTTATGGTTTTCTG+TGG + tig0038342:13750-13769 Msa1457070:intron 35.0%
TCCAAAACATACACAAACGA+AGG + tig0038342:13829-13848 Msa1457070:three_prime_UTR 35.0%
! ACCTTCGTTTGTGTATGTTT+TGG - tig0038342:13833-13852 None:intergenic 35.0%
!!! ACACAAACGAAGGTTTTGAA+TGG + tig0038342:13839-13858 Msa1457070:three_prime_UTR 35.0%
!!! CACAAACGAAGGTTTTGAAT+GGG + tig0038342:13840-13859 Msa1457070:three_prime_UTR 35.0%
! TCCAATTTTCAGTCATCTCA+GGG - tig0038342:13909-13928 None:intergenic 35.0%
! ATCCAATTTTCAGTCATCTC+AGG - tig0038342:13910-13929 None:intergenic 35.0%
TAAGCCCCACAAAAATTGTT+TGG + tig0038342:14003-14022 Msa1457070:three_prime_UTR 35.0%
! CGAACAAAACATTCTGAAAG+TGG - tig0038342:14091-14110 None:intergenic 35.0%
! AAGGGTGTAGAGAAAAGAGA+AGG - tig0038342:10724-10743 None:intergenic 40.0%
! GGTATCAAAGAGGGTCATTT+TGG - tig0038342:10776-10795 None:intergenic 40.0%
TTGTGGACAAAATTGTGCTG+TGG + tig0038342:10943-10962 Msa1457070:CDS 40.0%
! CATAAGCTTCCAGTGTTGTT+GGG + tig0038342:10966-10985 Msa1457070:CDS 40.0%
! ATAAGCTTCCAGTGTTGTTG+GGG + tig0038342:10967-10986 Msa1457070:CDS 40.0%
TTGTTGGGGGCAATATACTT+GGG + tig0038342:10981-11000 Msa1457070:CDS 40.0%
GGGCAATATACTTGGGAATT+AGG + tig0038342:10988-11007 Msa1457070:CDS 40.0%
CGTTACAATCTGTTGCATGT+TGG + tig0038342:11026-11045 Msa1457070:CDS 40.0%
TACAATCTGTTGCATGTTGG+AGG + tig0038342:11029-11048 Msa1457070:CDS 40.0%
ACACTATGCATATCGTACTC+CGG + tig0038342:11079-11098 Msa1457070:CDS 40.0%
! CCATAATTTAAAGTCGTCGG+AGG - tig0038342:11173-11192 None:intergenic 40.0%
CCTCCGACGACTTTAAATTA+TGG + tig0038342:11170-11189 Msa1457070:intron 40.0%
AGAAAGAGCTTCATAGACAC+AGG + tig0038342:11328-11347 Msa1457070:CDS 40.0%
GAAAGAGCTTCATAGACACA+GGG + tig0038342:11329-11348 Msa1457070:CDS 40.0%
TCATTTAGAGGACACTGAAC+AGG + tig0038342:11411-11430 Msa1457070:three_prime_UTR 40.0%
GATGTAAAAAAGGGACACGA+TGG + tig0038342:11608-11627 Msa1457070:intron 40.0%
TCCAAAACATTAGGACTCCT+TGG + tig0038342:11845-11864 Msa1457070:three_prime_UTR 40.0%
! ACCAAGGAGTCCTAATGTTT+TGG - tig0038342:11849-11868 None:intergenic 40.0%
AAAACATTAGGACTCCTTGG+TGG + tig0038342:11848-11867 Msa1457070:three_prime_UTR 40.0%
! AGGGATGGAAGTGTGATATA+TGG + tig0038342:12210-12229 Msa1457070:intron 40.0%
! GGGATGGAAGTGTGATATAT+GGG + tig0038342:12211-12230 Msa1457070:intron 40.0%
CAGAGTAAGGACATTCAAAG+AGG + tig0038342:12254-12273 Msa1457070:three_prime_UTR 40.0%
CTTCTTGAGCATGATGAGAA+AGG + tig0038342:12303-12322 Msa1457070:three_prime_UTR 40.0%
ATTTCGAACATCACCGGATA+CGG - tig0038342:12334-12353 None:intergenic 40.0%
CCATGAATTTCGAACATCAC+CGG - tig0038342:12340-12359 None:intergenic 40.0%
CGGTGATGTTCGAAATTCAT+GGG + tig0038342:12338-12357 Msa1457070:three_prime_UTR 40.0%
!!! ACTGCACTCATTTTTTGCCT+CGG + tig0038342:12476-12495 Msa1457070:intron 40.0%
AAAACGCGCATTAATTTCCG+AGG - tig0038342:12496-12515 None:intergenic 40.0%
! ATACTCTTTTGGCATCCATG+AGG + tig0038342:12649-12668 Msa1457070:three_prime_UTR 40.0%
TCAACTGGTAAGTCTGCATA+TGG + tig0038342:12673-12692 Msa1457070:intron 40.0%
! TTGGCAGGTATGGATTTTTG+GGG + tig0038342:12775-12794 Msa1457070:intron 40.0%
ACCAACTAATCCACTAAGCT+CGG - tig0038342:12838-12857 None:intergenic 40.0%
TATGGAACTCCATGATCTCT+TGG - tig0038342:12870-12889 None:intergenic 40.0%
TTGTAGGCTTGATGTTTCGA+AGG - tig0038342:12956-12975 None:intergenic 40.0%
CATTTGTCTTCTCCTGTTGT+AGG - tig0038342:12972-12991 None:intergenic 40.0%
GTGCCAATGACAGAAATGAT+AGG + tig0038342:13162-13181 Msa1457070:three_prime_UTR 40.0%
CATAAAGTAACAGCACCACA+TGG - tig0038342:13255-13274 None:intergenic 40.0%
!! CATGTGGTGCTGTTACTTTA+TGG + tig0038342:13253-13272 Msa1457070:three_prime_UTR 40.0%
GGTTATTGAAGCTCTCAAAG+AGG + tig0038342:13558-13577 Msa1457070:three_prime_UTR 40.0%
! TGATGATGATGTTGAGAAGC+TGG + tig0038342:13585-13604 Msa1457070:three_prime_UTR 40.0%
CTTTGATCTTCTTCTCAGCA+TGG - tig0038342:13627-13646 None:intergenic 40.0%
CATGCTGAGAAGAAGATCAA+AGG + tig0038342:13625-13644 Msa1457070:three_prime_UTR 40.0%
TCTTTGTGATCATGGCTTCA+AGG + tig0038342:13677-13696 Msa1457070:three_prime_UTR 40.0%
CTGTGGTGACTATGATGTTT+AGG + tig0038342:13767-13786 Msa1457070:intron 40.0%
TGGTGACTATGATGTTTAGG+AGG + tig0038342:13770-13789 Msa1457070:intron 40.0%
! CTTTGAAGGATGTGATTGAC+AGG + tig0038342:13878-13897 Msa1457070:three_prime_UTR 40.0%
TCCCTGAGATGACTGAAAAT+TGG + tig0038342:13905-13924 Msa1457070:three_prime_UTR 40.0%
GGGGCTTATCTCAAATATAG+AGG - tig0038342:13991-14010 None:intergenic 40.0%
!! GTCTCAGTTTTAACACAGGC+AGG - tig0038342:10672-10691 None:intergenic 45.0%
!! TCATTTTGGCCACAAGAGGT+TGG - tig0038342:10762-10781 None:intergenic 45.0%
GCATAAGCTTCCAGTGTTGT+TGG + tig0038342:10965-10984 Msa1457070:CDS 45.0%
! TAAGCTTCCAGTGTTGTTGG+GGG + tig0038342:10968-10987 Msa1457070:CDS 45.0%
TATATTGCCCCCAACAACAC+TGG - tig0038342:10978-10997 None:intergenic 45.0%
GTTGTTGGGGGCAATATACT+TGG + tig0038342:10980-10999 Msa1457070:CDS 45.0%
ACTACCGATCAAGTGATCGT+CGG - tig0038342:11123-11142 None:intergenic 45.0%
GATCACTTGATCGGTAGTCA+GGG + tig0038342:11125-11144 Msa1457070:intron 45.0%
GGTAGTCAGGGAACTATCAT+CGG + tig0038342:11137-11156 Msa1457070:intron 45.0%
CTTTCTTGCTAGAAGCTTCG+AGG - tig0038342:11314-11333 None:intergenic 45.0%
GGCTCTTCACACATGAAGTT+TGG + tig0038342:11820-11839 Msa1457070:three_prime_UTR 45.0%
AGAAGGGAATGAGCAGAGTA+AGG + tig0038342:12241-12260 Msa1457070:three_prime_UTR 45.0%
!! GAGAAAGGTATTCCCGTATC+CGG + tig0038342:12318-12337 Msa1457070:three_prime_UTR 45.0%
TTTCGAACATCACCGGATAC+GGG - tig0038342:12333-12352 None:intergenic 45.0%
CCGGTGATGTTCGAAATTCA+TGG + tig0038342:12337-12356 Msa1457070:three_prime_UTR 45.0%
GATGTTCGAAATTCATGGGC+TGG + tig0038342:12342-12361 Msa1457070:three_prime_UTR 45.0%
ATGAGTGCAGTGGCAGAAAA+TGG - tig0038342:12467-12486 None:intergenic 45.0%
GAGGCAAAAAATGAGTGCAG+TGG - tig0038342:12477-12496 None:intergenic 45.0%
GACTTACCAGTTGATCCTCA+TGG - tig0038342:12667-12686 None:intergenic 45.0%
CCAACTAATCCACTAAGCTC+GGG - tig0038342:12837-12856 None:intergenic 45.0%
CTTAAGGAGCCAAGAGATCA+TGG + tig0038342:12858-12877 Msa1457070:three_prime_UTR 45.0%
CGAAACATCAAGCCTACAAC+AGG + tig0038342:12957-12976 Msa1457070:three_prime_UTR 45.0%
!! TAGTGTGGTTCTGAATGCGA+AGG + tig0038342:13108-13127 Msa1457070:intron 45.0%
!! AGTGTGGTTCTGAATGCGAA+GGG + tig0038342:13109-13128 Msa1457070:intron 45.0%
AAGTAACAGCACCACATGGT+TGG - tig0038342:13251-13270 None:intergenic 45.0%
GGAACTTTCCAACATGGCTA+AGG + tig0038342:13274-13293 Msa1457070:three_prime_UTR 45.0%
ATGAGGTTCCTTAGCCATGT+TGG - tig0038342:13285-13304 None:intergenic 45.0%
AAGACCTGATCCAGTTGACA+TGG + tig0038342:13329-13348 Msa1457070:three_prime_UTR 45.0%
TCCAGTTGACATGGCTACTA+TGG + tig0038342:13338-13357 Msa1457070:three_prime_UTR 45.0%
TCCATAGTAGCCATGTCAAC+TGG - tig0038342:13342-13361 None:intergenic 45.0%
GTTGACATGGCTACTATGGA+AGG + tig0038342:13342-13361 Msa1457070:three_prime_UTR 45.0%
ATAGAGAAAGGGGAGTTGCA+AGG + tig0038342:13464-13483 Msa1457070:three_prime_UTR 45.0%
! GAGAAGCTGGACTTGATAGT+TGG + tig0038342:13598-13617 Msa1457070:three_prime_UTR 45.0%
CTCAAGTGCATTCTCTGTGT+GGG + tig0038342:13936-13955 Msa1457070:three_prime_UTR 45.0%
!! CATATATAATTAATAAATAT+TGG - tig0038342:11438-11457 None:intergenic 5.0%
TCTACACCCTTCATTCACCC+TGG + tig0038342:10733-10752 Msa1457070:CDS 50.0%
TGGAGACCAGGGTGAATGAA+GGG - tig0038342:10742-10761 None:intergenic 50.0%
TTGGAGACCAGGGTGAATGA+AGG - tig0038342:10743-10762 None:intergenic 50.0%
!! AGGGTCATTTTGGCCACAAG+AGG - tig0038342:10766-10785 None:intergenic 50.0%
TTGCATGTTGGAGGAGTGAG+TGG + tig0038342:11038-11057 Msa1457070:CDS 50.0%
TATGCATATCGTACTCCGGC+AGG + tig0038342:11083-11102 Msa1457070:CDS 50.0%
TACCGATCAAGTGATCGTCG+GGG - tig0038342:11121-11140 None:intergenic 50.0%
CTACCGATCAAGTGATCGTC+GGG - tig0038342:11122-11141 None:intergenic 50.0%
CGATCACTTGATCGGTAGTC+AGG + tig0038342:11124-11143 Msa1457070:intron 50.0%
! AAGTCGTCGGAGGCATATTC+CGG - tig0038342:11163-11182 None:intergenic 50.0%
GTGGAAATCAGTGCTCCTGA+TGG + tig0038342:11736-11755 Msa1457070:three_prime_UTR 50.0%
GCTCCTGATGGTTACTCAAG+CGG + tig0038342:11748-11767 Msa1457070:three_prime_UTR 50.0%
TGGCATCCATGAGGATCAAC+TGG + tig0038342:12658-12677 Msa1457070:three_prime_UTR 50.0%
!!! ATTTTGGGACCCGAGCTTAG+TGG + tig0038342:12825-12844 Msa1457070:three_prime_UTR 50.0%
!! CCCGAGCTTAGTGGATTAGT+TGG + tig0038342:12834-12853 Msa1457070:three_prime_UTR 50.0%
TTTCGAAGGACAAGCTCCTC+AGG - tig0038342:12942-12961 None:intergenic 50.0%
! TCTATGGGCTACCAACCATG+TGG + tig0038342:13237-13256 Msa1457070:three_prime_UTR 50.0%
GTAGCCATGTCAACTGGATC+AGG - tig0038342:13336-13355 None:intergenic 50.0%
GCTCAAGTGCATTCTCTGTG+TGG + tig0038342:13935-13954 Msa1457070:three_prime_UTR 50.0%
CCACAAGAGGTTGGAGACCA+GGG - tig0038342:10753-10772 None:intergenic 55.0%
CACCCCGACGATCACTTGAT+CGG + tig0038342:11116-11135 Msa1457070:CDS 55.0%
GTCAGGGAACTATCATCGGC+CGG + tig0038342:11141-11160 Msa1457070:intron 55.0%
CAGCCGCTTGAGTAACCATC+AGG - tig0038342:11754-11773 None:intergenic 55.0%
! GGCTGGTTATTCCCTTCTGC+AGG + tig0038342:12359-12378 Msa1457070:three_prime_UTR 55.0%
GATGCATGCACTCTTGCCTG+AGG + tig0038342:12923-12942 Msa1457070:three_prime_UTR 55.0%
CCCTGGTCTCCAACCTCTTG+TGG + tig0038342:10750-10769 Msa1457070:CDS 60.0%
GCCACAAGAGGTTGGAGACC+AGG - tig0038342:10754-10773 None:intergenic 60.0%
CGATCAAGTGATCGTCGGGG+TGG - tig0038342:11118-11137 None:intergenic 60.0%
GTTAGACCCTCACCCTGCAC+TGG + tig0038342:11285-11304 Msa1457070:CDS 60.0%
AGACCCTCACCCTGCACTGG+TGG + tig0038342:11288-11307 Msa1457070:CDS 65.0%
AGGCCACCAGTGCAGGGTGA+GGG - tig0038342:11294-11313 None:intergenic 65.0%
GCTTCGAGGCCACCAGTGCA+GGG - tig0038342:11300-11319 None:intergenic 65.0%
AGCTTCGAGGCCACCAGTGC+AGG - tig0038342:11301-11320 None:intergenic 65.0%
GGGTGGTTGCACGTGCCTGC+CGG - tig0038342:11101-11120 None:intergenic 70.0%
GAGGCCACCAGTGCAGGGTG+AGG - tig0038342:11295-11314 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0038342 gene 10628 14217 10628 ID=Msa1457070;Name=Msa1457070
tig0038342 mRNA 10628 14217 10628 ID=Msa1457070-mRNA-1;Parent=Msa1457070;Name=Msa1457070-mRNA-1;_AED=0.12;_eAED=0.12;_QI=87|0.88|0.9|1|1|1|10|1629|138
tig0038342 exon 10628 10807 10628 ID=Msa1457070-mRNA-1:exon:20984;Parent=Msa1457070-mRNA-1
tig0038342 exon 10933 11137 10933 ID=Msa1457070-mRNA-1:exon:20985;Parent=Msa1457070-mRNA-1
tig0038342 exon 11283 11432 11283 ID=Msa1457070-mRNA-1:exon:20986;Parent=Msa1457070-mRNA-1
tig0038342 exon 11736 11869 11736 ID=Msa1457070-mRNA-1:exon:20987;Parent=Msa1457070-mRNA-1
tig0038342 exon 12212 12425 12212 ID=Msa1457070-mRNA-1:exon:20988;Parent=Msa1457070-mRNA-1
tig0038342 exon 12534 12679 12534 ID=Msa1457070-mRNA-1:exon:20989;Parent=Msa1457070-mRNA-1
tig0038342 exon 12782 13009 12782 ID=Msa1457070-mRNA-1:exon:20990;Parent=Msa1457070-mRNA-1
tig0038342 exon 13161 13363 13161 ID=Msa1457070-mRNA-1:exon:20991;Parent=Msa1457070-mRNA-1
tig0038342 exon 13455 13698 13455 ID=Msa1457070-mRNA-1:exon:20992;Parent=Msa1457070-mRNA-1
tig0038342 exon 13789 14217 13789 ID=Msa1457070-mRNA-1:exon:20993;Parent=Msa1457070-mRNA-1
tig0038342 five_prime_UTR 10628 10714 10628 ID=Msa1457070-mRNA-1:five_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 CDS 10715 10807 10715 ID=Msa1457070-mRNA-1:cds;Parent=Msa1457070-mRNA-1
tig0038342 CDS 10933 11137 10933 ID=Msa1457070-mRNA-1:cds;Parent=Msa1457070-mRNA-1
tig0038342 CDS 11283 11401 11283 ID=Msa1457070-mRNA-1:cds;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 11402 11432 11402 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 11736 11869 11736 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 12212 12425 12212 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 12534 12679 12534 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 12782 13009 12782 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 13161 13363 13161 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 13455 13698 13455 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
tig0038342 three_prime_UTR 13789 14217 13789 ID=Msa1457070-mRNA-1:three_prime_utr;Parent=Msa1457070-mRNA-1
Gene Sequence

>Msa1457070

ATGGCACCTTCTCTTTTCTCTACACCCTTCATTCACCCTGGTCTCCAACCTCTTGTGGCCAAAATGACCCTCTTTGATACCATACTTTTCTATGTGATACATTTTGTGGACAAAATTGTGCTGTGGCATAAGCTTCCAGTGTTGTTGGGGGCAATATACTTGGGAATTAGGAGACACTTACACTTTCGTTACAATCTGTTGCATGTTGGAGGAGTGAGTGGCAACAATTATGATACACAACACTATGCATATCGTACTCCGGCAGGCACGTGCAACCACCCCGACGATCACTTGATCGCTGTTAGACCCTCACCCTGCACTGGTGGCCTCGAAGCTTCTAGCAAGAAAGAGCTTCATAGACACAGGGAAGCAATTCAACATGATAGCTTGTTCATGGATACAGTTCATGATTCATGA

Protein sequence

>Msa1457070

MAPSLFSTPFIHPGLQPLVAKMTLFDTILFYVIHFVDKIVLWHKLPVLLGAIYLGIRRHLHFRYNLLHVGGVSGNNYDTQHYAYRTPAGTCNHPDDHLIAVRPSPCTGGLEASSKKELHRHREAIQHDSLFMDTVHDS*