Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0307610 | KEH39975.1 | 95.608 | 592 | 13 | 1 | 1 | 592 | 1 | 579 | 0.0 | 1156 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0307610 | sp|F4IBD7|CSCLA_ARATH | 59.696 | 593 | 225 | 4 | 1 | 589 | 1 | 583 | 0.0 | 706 |
Msa0307610 | sp|F4IBD7|CSCLA_ARATH | 56.800 | 125 | 51 | 1 | 650 | 771 | 582 | 706 | 2.16e-34 | 144 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017770 | Msa0307610 | 0.981380 | 1.894187e-152 | -8.615850e-47 |
Msa0027260 | Msa0307610 | -0.805079 | 1.587275e-49 | -8.615850e-47 |
Msa0098180 | Msa0307610 | 0.988135 | 7.615370e-173 | -8.615850e-47 |
Msa0280610 | Msa0307610 | -0.830863 | 2.311357e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0307610 | MtrunA17_Chr1g0152031 | 95.925 | 589 | 11 | 1 | 1 | 589 | 1 | 576 | 0.0 | 1154 |
Msa0307610 | MtrunA17_Chr1g0152031 | 96.907 | 194 | 6 | 0 | 650 | 843 | 575 | 768 | 6.83e-126 | 396 |
Msa0307610 | MtrunA17_Chr6g0453641 | 42.475 | 598 | 318 | 7 | 1 | 589 | 1 | 581 | 1.06e-157 | 477 |
Msa0307610 | MtrunA17_Chr6g0453641 | 41.284 | 109 | 64 | 0 | 650 | 758 | 580 | 688 | 1.47e-21 | 100 |
Msa0307610 | MtrunA17_Chr4g0042751 | 41.709 | 597 | 328 | 6 | 1 | 589 | 1 | 585 | 7.77e-146 | 446 |
Msa0307610 | MtrunA17_Chr4g0042751 | 41.732 | 127 | 69 | 2 | 650 | 771 | 584 | 710 | 8.92e-25 | 110 |
Msa0307610 | MtrunA17_Chr7g0217981 | 40.193 | 622 | 323 | 8 | 1 | 589 | 1 | 606 | 7.92e-140 | 432 |
Msa0307610 | MtrunA17_Chr7g0217981 | 43.119 | 109 | 62 | 0 | 650 | 758 | 605 | 713 | 3.04e-27 | 118 |
Msa0307610 | MtrunA17_Chr5g0418061 | 42.327 | 593 | 327 | 6 | 1 | 589 | 1 | 582 | 6.17e-137 | 423 |
Msa0307610 | MtrunA17_Chr5g0418061 | 38.095 | 126 | 74 | 1 | 650 | 771 | 581 | 706 | 8.35e-21 | 97.8 |
Msa0307610 | MtrunA17_Chr5g0439871 | 29.654 | 607 | 389 | 9 | 9 | 589 | 10 | 604 | 4.86e-93 | 309 |
Msa0307610 | MtrunA17_Chr7g0259591 | 29.279 | 666 | 423 | 13 | 3 | 634 | 4 | 655 | 2.47e-90 | 301 |
Msa0307610 | MtrunA17_Chr5g0409801 | 28.594 | 633 | 415 | 9 | 9 | 612 | 10 | 634 | 1.36e-87 | 295 |
Msa0307610 | MtrunA17_Chr5g0409801 | 30.000 | 110 | 77 | 0 | 650 | 759 | 605 | 714 | 2.13e-12 | 71.2 |
Msa0307610 | MtrunA17_Chr4g0075301 | 29.981 | 517 | 336 | 6 | 9 | 506 | 10 | 519 | 1.45e-73 | 250 |
Msa0307610 | MtrunA17_Chr3g0135291 | 73.514 | 185 | 48 | 1 | 410 | 593 | 3 | 187 | 3.93e-73 | 238 |
Msa0307610 | MtrunA17_Chr3g0135261 | 67.568 | 148 | 47 | 1 | 1 | 148 | 1 | 147 | 3.73e-66 | 217 |
Msa0307610 | MtrunA17_Chr2g0285541 | 28.106 | 644 | 412 | 16 | 1 | 612 | 1 | 625 | 3.07e-64 | 229 |
Msa0307610 | MtrunA17_Chr3g0084121 | 41.869 | 289 | 166 | 2 | 303 | 589 | 5 | 293 | 2.27e-58 | 205 |
Msa0307610 | MtrunA17_Chr3g0084121 | 37.008 | 127 | 74 | 2 | 650 | 772 | 292 | 416 | 2.11e-19 | 91.7 |
Msa0307610 | MtrunA17_Chr3g0135301 | 60.690 | 145 | 53 | 1 | 652 | 792 | 25 | 169 | 1.25e-49 | 172 |
Msa0307610 | MtrunA17_Chr3g0135281 | 50.602 | 166 | 69 | 3 | 242 | 405 | 1 | 155 | 3.11e-46 | 162 |
Msa0307610 | MtrunA17_Chr3g0135271 | 72.857 | 70 | 19 | 0 | 164 | 233 | 2 | 71 | 9.12e-28 | 107 |
Msa0307610 | MtrunA17_Chr3g0084141 | 43.299 | 97 | 55 | 0 | 1 | 97 | 1 | 97 | 2.95e-20 | 86.7 |
Msa0307610 | MtrunA17_Chr3g0084131 | 33.974 | 156 | 97 | 4 | 78 | 232 | 38 | 188 | 3.72e-17 | 81.3 |
Msa0307610 | MtrunA17_Chr5g0412041 | 84.091 | 44 | 7 | 0 | 611 | 654 | 199 | 242 | 2.01e-16 | 83.6 |
Msa0307610 | MtrunA17_Chr4g0075291 | 31.818 | 110 | 75 | 0 | 650 | 759 | 74 | 183 | 9.92e-13 | 68.9 |
Msa0307610 | MtrunA17_Chr7g0223561 | 67.213 | 61 | 19 | 1 | 592 | 652 | 263 | 322 | 6.18e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0307610 | AT1G58520.4 | 59.696 | 593 | 225 | 4 | 1 | 589 | 1 | 583 | 0.0 | 706 |
Msa0307610 | AT1G58520.4 | 56.800 | 125 | 51 | 1 | 650 | 771 | 582 | 706 | 2.19e-35 | 144 |
Msa0307610 | AT1G58520.1 | 59.696 | 593 | 225 | 4 | 1 | 589 | 1 | 583 | 0.0 | 706 |
Msa0307610 | AT1G58520.1 | 56.800 | 125 | 51 | 1 | 650 | 771 | 582 | 706 | 2.19e-35 | 144 |
Msa0307610 | AT1G58520.7 | 59.696 | 593 | 225 | 4 | 1 | 589 | 1 | 583 | 0.0 | 706 |
Msa0307610 | AT1G58520.7 | 56.800 | 125 | 51 | 1 | 650 | 771 | 582 | 706 | 2.19e-35 | 144 |
Msa0307610 | AT1G58520.6 | 59.696 | 593 | 225 | 4 | 1 | 589 | 1 | 583 | 0.0 | 706 |
Msa0307610 | AT1G58520.6 | 56.800 | 125 | 51 | 1 | 650 | 771 | 582 | 706 | 2.19e-35 | 144 |
Msa0307610 | AT1G58520.2 | 59.696 | 593 | 225 | 4 | 1 | 589 | 1 | 583 | 0.0 | 706 |
Msa0307610 | AT1G58520.2 | 56.800 | 125 | 51 | 1 | 650 | 771 | 582 | 706 | 2.19e-35 | 144 |
Msa0307610 | AT1G10090.1 | 57.432 | 592 | 237 | 4 | 1 | 589 | 1 | 580 | 0.0 | 677 |
Msa0307610 | AT1G10090.1 | 52.593 | 135 | 62 | 1 | 650 | 782 | 579 | 713 | 2.35e-34 | 141 |
Msa0307610 | AT1G58520.5 | 57.806 | 474 | 187 | 3 | 119 | 589 | 2 | 465 | 0.0 | 545 |
Msa0307610 | AT1G58520.5 | 56.800 | 125 | 51 | 1 | 650 | 771 | 464 | 588 | 9.45e-36 | 144 |
Msa0307610 | AT1G69450.3 | 37.845 | 761 | 420 | 6 | 1 | 758 | 1 | 711 | 2.72e-171 | 513 |
Msa0307610 | AT3G01100.2 | 40.970 | 598 | 329 | 6 | 1 | 589 | 1 | 583 | 2.29e-148 | 449 |
Msa0307610 | AT3G01100.1 | 40.970 | 598 | 329 | 6 | 1 | 589 | 1 | 583 | 4.10e-147 | 450 |
Msa0307610 | AT3G01100.1 | 43.443 | 122 | 69 | 0 | 650 | 771 | 582 | 703 | 9.30e-27 | 117 |
Msa0307610 | AT3G01100.4 | 40.970 | 598 | 329 | 6 | 1 | 589 | 47 | 629 | 3.61e-146 | 449 |
Msa0307610 | AT3G01100.4 | 43.443 | 122 | 69 | 0 | 650 | 771 | 628 | 749 | 1.27e-26 | 117 |
Msa0307610 | AT1G69450.2 | 40.372 | 592 | 335 | 4 | 1 | 589 | 1 | 577 | 7.53e-141 | 434 |
Msa0307610 | AT1G69450.2 | 43.119 | 109 | 62 | 0 | 650 | 758 | 576 | 684 | 2.03e-24 | 110 |
Msa0307610 | AT1G69450.1 | 40.372 | 592 | 335 | 4 | 1 | 589 | 1 | 577 | 7.53e-141 | 434 |
Msa0307610 | AT1G69450.1 | 43.119 | 109 | 62 | 0 | 650 | 758 | 576 | 684 | 2.03e-24 | 110 |
Msa0307610 | AT3G01100.3 | 39.323 | 473 | 266 | 4 | 123 | 589 | 11 | 468 | 9.25e-110 | 348 |
Msa0307610 | AT3G01100.3 | 43.443 | 122 | 69 | 0 | 650 | 771 | 467 | 588 | 6.03e-27 | 117 |
Msa0307610 | AT3G54510.3 | 36.745 | 596 | 345 | 8 | 5 | 589 | 5 | 579 | 5.10e-106 | 338 |
Msa0307610 | AT3G54510.2 | 37.205 | 594 | 345 | 8 | 5 | 589 | 5 | 579 | 7.34e-105 | 340 |
Msa0307610 | AT3G54510.2 | 35.938 | 128 | 76 | 1 | 650 | 771 | 578 | 705 | 2.31e-20 | 97.1 |
Msa0307610 | AT1G11960.2 | 30.782 | 614 | 388 | 10 | 9 | 595 | 10 | 613 | 1.26e-96 | 315 |
Msa0307610 | AT1G11960.1 | 30.189 | 636 | 402 | 11 | 9 | 612 | 10 | 635 | 2.63e-95 | 316 |
Msa0307610 | AT1G11960.1 | 36.486 | 74 | 47 | 0 | 650 | 723 | 606 | 679 | 6.97e-11 | 66.6 |
Msa0307610 | AT1G11960.3 | 30.189 | 636 | 402 | 11 | 9 | 612 | 10 | 635 | 2.63e-95 | 316 |
Msa0307610 | AT1G11960.3 | 36.486 | 74 | 47 | 0 | 650 | 723 | 606 | 679 | 6.97e-11 | 66.6 |
Msa0307610 | AT4G15430.2 | 30.564 | 638 | 397 | 12 | 9 | 612 | 10 | 635 | 2.40e-94 | 313 |
Msa0307610 | AT4G15430.2 | 31.298 | 131 | 83 | 2 | 650 | 773 | 606 | 736 | 1.98e-11 | 68.2 |
Msa0307610 | AT4G15430.1 | 30.564 | 638 | 397 | 12 | 9 | 612 | 10 | 635 | 2.41e-94 | 313 |
Msa0307610 | AT4G15430.1 | 31.852 | 135 | 78 | 4 | 650 | 773 | 606 | 737 | 2.63e-11 | 67.8 |
Msa0307610 | AT4G22120.2 | 30.033 | 606 | 392 | 7 | 9 | 589 | 10 | 608 | 7.13e-94 | 312 |
Msa0307610 | AT4G22120.2 | 36.486 | 74 | 47 | 0 | 650 | 723 | 607 | 680 | 7.27e-12 | 69.7 |
Msa0307610 | AT4G22120.4 | 30.033 | 606 | 392 | 7 | 9 | 589 | 10 | 608 | 7.13e-94 | 312 |
Msa0307610 | AT4G22120.4 | 36.486 | 74 | 47 | 0 | 650 | 723 | 607 | 680 | 7.27e-12 | 69.7 |
Msa0307610 | AT4G22120.5 | 30.033 | 606 | 392 | 7 | 9 | 589 | 10 | 608 | 7.13e-94 | 312 |
Msa0307610 | AT4G22120.5 | 36.486 | 74 | 47 | 0 | 650 | 723 | 607 | 680 | 7.27e-12 | 69.7 |
Msa0307610 | AT4G22120.1 | 30.033 | 606 | 392 | 7 | 9 | 589 | 10 | 608 | 7.13e-94 | 312 |
Msa0307610 | AT4G22120.1 | 36.486 | 74 | 47 | 0 | 650 | 723 | 607 | 680 | 7.27e-12 | 69.7 |
Msa0307610 | AT4G22120.6 | 30.033 | 606 | 392 | 7 | 9 | 589 | 10 | 608 | 7.13e-94 | 312 |
Msa0307610 | AT4G22120.6 | 36.486 | 74 | 47 | 0 | 650 | 723 | 607 | 680 | 7.27e-12 | 69.7 |
Msa0307610 | AT4G22120.3 | 30.033 | 606 | 392 | 7 | 9 | 589 | 10 | 608 | 7.13e-94 | 312 |
Msa0307610 | AT4G22120.3 | 36.486 | 74 | 47 | 0 | 650 | 723 | 607 | 680 | 7.27e-12 | 69.7 |
Msa0307610 | AT4G02900.4 | 30.317 | 630 | 395 | 10 | 9 | 606 | 10 | 627 | 9.99e-94 | 311 |
Msa0307610 | AT4G02900.4 | 30.000 | 110 | 77 | 0 | 650 | 759 | 604 | 713 | 6.55e-11 | 66.6 |
Msa0307610 | AT4G02900.3 | 30.317 | 630 | 395 | 10 | 9 | 606 | 10 | 627 | 9.99e-94 | 311 |
Msa0307610 | AT4G02900.3 | 30.000 | 110 | 77 | 0 | 650 | 759 | 604 | 713 | 6.55e-11 | 66.6 |
Msa0307610 | AT4G02900.1 | 30.317 | 630 | 395 | 10 | 9 | 606 | 10 | 627 | 2.39e-93 | 311 |
Msa0307610 | AT4G02900.1 | 30.000 | 110 | 77 | 0 | 650 | 759 | 604 | 713 | 6.63e-11 | 66.6 |
Msa0307610 | AT4G04340.2 | 30.313 | 607 | 390 | 9 | 9 | 589 | 10 | 609 | 9.41e-91 | 303 |
Msa0307610 | AT4G04340.2 | 37.838 | 74 | 46 | 0 | 650 | 723 | 608 | 681 | 2.67e-12 | 71.2 |
Msa0307610 | AT4G04340.1 | 30.313 | 607 | 390 | 9 | 9 | 589 | 10 | 609 | 9.41e-91 | 303 |
Msa0307610 | AT4G04340.1 | 37.838 | 74 | 46 | 0 | 650 | 723 | 608 | 681 | 2.67e-12 | 71.2 |
Msa0307610 | AT4G04340.3 | 30.313 | 607 | 390 | 9 | 9 | 589 | 10 | 609 | 9.41e-91 | 303 |
Msa0307610 | AT4G04340.3 | 37.838 | 74 | 46 | 0 | 650 | 723 | 608 | 681 | 2.67e-12 | 71.2 |
Msa0307610 | AT3G21620.1 | 30.269 | 631 | 406 | 9 | 9 | 612 | 10 | 633 | 3.88e-90 | 301 |
Msa0307610 | AT1G62320.4 | 30.198 | 606 | 388 | 9 | 9 | 589 | 10 | 605 | 5.70e-87 | 293 |
Msa0307610 | AT1G62320.4 | 27.429 | 175 | 117 | 3 | 650 | 824 | 604 | 768 | 3.84e-11 | 67.4 |
Msa0307610 | AT1G62320.1 | 30.198 | 606 | 388 | 9 | 9 | 589 | 10 | 605 | 7.83e-87 | 293 |
Msa0307610 | AT1G62320.2 | 30.179 | 613 | 391 | 10 | 9 | 594 | 10 | 612 | 2.16e-86 | 288 |
Msa0307610 | AT1G62320.3 | 30.263 | 608 | 387 | 10 | 9 | 589 | 10 | 607 | 7.47e-86 | 290 |
Msa0307610 | AT1G62320.3 | 27.429 | 175 | 117 | 3 | 650 | 824 | 606 | 770 | 3.81e-11 | 67.4 |
Msa0307610 | AT1G62320.5 | 30.263 | 608 | 387 | 10 | 9 | 589 | 10 | 607 | 7.47e-86 | 290 |
Msa0307610 | AT1G62320.5 | 27.429 | 175 | 117 | 3 | 650 | 824 | 606 | 770 | 3.81e-11 | 67.4 |
Msa0307610 | AT1G32090.1 | 29.460 | 611 | 388 | 11 | 9 | 589 | 10 | 607 | 4.31e-83 | 283 |
Msa0307610 | AT1G32090.1 | 33.628 | 113 | 75 | 0 | 650 | 762 | 606 | 718 | 6.28e-12 | 70.1 |
Msa0307610 | AT3G54510.5 | 35.600 | 500 | 299 | 7 | 94 | 589 | 4 | 484 | 2.48e-78 | 262 |
Msa0307610 | AT3G54510.4 | 35.600 | 500 | 299 | 7 | 94 | 589 | 4 | 484 | 1.77e-77 | 263 |
Msa0307610 | AT3G54510.4 | 35.938 | 128 | 76 | 1 | 650 | 771 | 483 | 610 | 1.75e-20 | 97.1 |
Msa0307610 | AT3G54510.1 | 35.600 | 500 | 299 | 7 | 94 | 589 | 4 | 484 | 1.77e-77 | 263 |
Msa0307610 | AT3G54510.1 | 35.938 | 128 | 76 | 1 | 650 | 771 | 483 | 610 | 1.75e-20 | 97.1 |
Msa0307610 | AT4G02900.2 | 31.723 | 476 | 293 | 8 | 151 | 606 | 3 | 466 | 1.66e-76 | 261 |
Msa0307610 | AT4G02900.2 | 30.000 | 110 | 77 | 0 | 650 | 759 | 443 | 552 | 6.07e-11 | 66.6 |
Msa0307610 | AT3G54510.6 | 35.610 | 410 | 242 | 6 | 184 | 589 | 9 | 400 | 2.68e-62 | 219 |
Msa0307610 | AT3G54510.6 | 35.938 | 128 | 76 | 1 | 650 | 771 | 399 | 526 | 1.09e-20 | 97.4 |
Msa0307610 | AT1G30360.1 | 25.232 | 646 | 426 | 14 | 1 | 611 | 1 | 624 | 4.07e-51 | 192 |
Msa0307610 | AT4G35870.1 | 21.481 | 540 | 347 | 15 | 56 | 531 | 70 | 596 | 3.81e-14 | 77.0 |
Find 218 sgRNAs with CRISPR-Local
Find 646 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTAGACACGTTGATTTC+TGG | 0.158124 | 2_4:+575529 | Msa0307610:CDS |
TAAATTGTAAATTGTGTAAA+TGG | 0.174141 | 2_4:+583696 | Msa0307610:three_prime_UTR |
CTATTACTGTTTGGATTTCT+TGG | 0.183449 | 2_4:+581525 | Msa0307610:CDS |
GTTATCTGTCTATCTTTAAT+TGG | 0.185020 | 2_4:-583738 | None:intergenic |
GTCATCTGGTTGGGCAAGTC+TGG | 0.198216 | 2_4:+581383 | Msa0307610:CDS |
TGGGTTCACCTGTTCTATTC+TGG | 0.206620 | 2_4:+581545 | Msa0307610:CDS |
CGCTTATTCAACTACTCTTT+TGG | 0.216396 | 2_4:+574199 | Msa0307610:five_prime_UTR |
GTGTACCATATAGGCAAATT+TGG | 0.231629 | 2_4:+579864 | Msa0307610:CDS |
CGGATCCAAATTTGCCTATA+TGG | 0.233087 | 2_4:-579869 | None:intergenic |
ATATGCTTTGAATTCAATTA+TGG | 0.248492 | 2_4:+573848 | Msa0307610:five_prime_UTR |
TGGAGCATTCAGATGGGCTT+GGG | 0.249984 | 2_4:-583336 | None:intergenic |
TTCAGGTGATGGTCATGATT+TGG | 0.274094 | 2_4:+575307 | Msa0307610:intron |
CCCCTTGTCCTCTGGTGGGC+TGG | 0.281593 | 2_4:-583356 | None:intergenic |
ACTGCCTTTGCAAGTGTTGC+AGG | 0.282164 | 2_4:-581103 | None:intergenic |
TTCCTTCCACTGCGGGAAAT+AGG | 0.287960 | 2_4:-580965 | None:intergenic |
TTGTCAAGTTTCATAGTATA+GGG | 0.304968 | 2_4:+575363 | Msa0307610:five_prime_UTR |
TTACCTACCAAGTGTGATAT+TGG | 0.315370 | 2_4:+580886 | Msa0307610:CDS |
CAATGAGTTGGATCCAAATA+TGG | 0.319493 | 2_4:+582339 | Msa0307610:CDS |
TTGCTCAACTTATCGCGCTT+GGG | 0.321315 | 2_4:+583019 | Msa0307610:CDS |
ATGCGGCATGGGTTGTTTGT+AGG | 0.325375 | 2_4:-583311 | None:intergenic |
CTGGAGCATTCAGATGGGCT+TGG | 0.325575 | 2_4:-583337 | None:intergenic |
GCTGAATTGCTTCTAAATAC+TGG | 0.325661 | 2_4:-583141 | None:intergenic |
GAAAATAGGCTTAGATGGTT+TGG | 0.331704 | 2_4:+582187 | Msa0307610:CDS |
TATTACTGTTTGGATTTCTT+GGG | 0.340448 | 2_4:+581526 | Msa0307610:CDS |
CCAGAGGACAAGGGGATTGC+TGG | 0.342797 | 2_4:+583364 | Msa0307610:CDS |
AAGTCGGTATGCTGCTCTTA+TGG | 0.344060 | 2_4:+579754 | Msa0307610:CDS |
CAGTGAACATCGTGTGGTTC+AGG | 0.344141 | 2_4:-579830 | None:intergenic |
TTGTAAGGATAGTCGTGTTC+AGG | 0.344528 | 2_4:+575649 | Msa0307610:CDS |
TGCCACACTTATAAATCATT+TGG | 0.345441 | 2_4:-577911 | None:intergenic |
AAACATCAAATCCTATGTTA+TGG | 0.349504 | 2_4:+579792 | Msa0307610:CDS |
TGACAGAAAATAGGCTTAGA+TGG | 0.351252 | 2_4:+582182 | Msa0307610:CDS |
TGTTGTGCCATGTTGCTGTT+TGG | 0.363997 | 2_4:+578654 | Msa0307610:CDS |
GGGCTTGGGGCATGCGGCAT+GGG | 0.367202 | 2_4:-583322 | None:intergenic |
AACATCTGAGAATGAGATAT+TGG | 0.369903 | 2_4:+575599 | Msa0307610:CDS |
CTTTCATCTCGTGGCCAGTT+AGG | 0.374669 | 2_4:+573640 | None:intergenic |
GTGCTTCCTGTGAATTATTA+CGG | 0.376357 | 2_4:+576727 | Msa0307610:CDS |
GTTAAGGATGATACACTTAA+TGG | 0.376934 | 2_4:+581468 | Msa0307610:CDS |
GTTCCTAGGCTATTACTGTT+TGG | 0.381514 | 2_4:+581516 | Msa0307610:CDS |
TTCCCGGTTGGGTTGGTACA+AGG | 0.384788 | 2_4:+579941 | Msa0307610:CDS |
GTTGTGCCATGTTGCTGTTT+GGG | 0.390922 | 2_4:+578655 | Msa0307610:CDS |
TTGAGGCTACTACATATTAC+TGG | 0.392657 | 2_4:+577762 | Msa0307610:CDS |
AAAGTACACATTAACATTGC+TGG | 0.397674 | 2_4:-575484 | None:intergenic |
AATCATTTGGTGAGACAGAT+AGG | 0.400641 | 2_4:-577898 | None:intergenic |
TCACCACCCGCCTCACATAT+TGG | 0.404617 | 2_4:-580859 | None:intergenic |
TGGGCTTGGGGCATGCGGCA+TGG | 0.405225 | 2_4:-583323 | None:intergenic |
AACCATTAGAAAAGACTTAG+AGG | 0.406494 | 2_4:+582315 | Msa0307610:CDS |
CCAACATTCGTGTACCATAT+AGG | 0.408446 | 2_4:+579855 | Msa0307610:CDS |
AGATCAAATGGAGGAGAGTC+AGG | 0.409734 | 2_4:+582252 | Msa0307610:CDS |
TAACCCTGAGTAGGAATCTC+TGG | 0.418479 | 2_4:-581449 | None:intergenic |
AATAAGAAGGGAAGCATTAG+AGG | 0.420508 | 2_4:-581570 | None:intergenic |
CCAGCAATCCCCTTGTCCTC+TGG | 0.422853 | 2_4:-583364 | None:intergenic |
TCTTCTTACAACGGCATCTA+CGG | 0.424045 | 2_4:-582227 | None:intergenic |
TAATAATACTAACCTGGTTT+CGG | 0.428813 | 2_4:-581623 | None:intergenic |
TTTGCTCAACTTATCGCGCT+TGG | 0.429584 | 2_4:+583018 | Msa0307610:CDS |
TTAATTAGATGTTCATGCAC+TGG | 0.432990 | 2_4:-583629 | None:intergenic |
GTGACTAAATGATTATACTT+TGG | 0.433877 | 2_4:+573909 | Msa0307610:five_prime_UTR |
GGTGGGCTGGAGCATTCAGA+TGG | 0.436201 | 2_4:-583343 | None:intergenic |
ATGTCGAAGAAGGTTCAAAA+TGG | 0.438635 | 2_4:+576809 | Msa0307610:CDS |
TTTCATCTCGTGGCCAGTTA+GGG | 0.439699 | 2_4:+573641 | None:intergenic |
GCAATCCCCTTGTCCTCTGG+TGG | 0.441289 | 2_4:-583361 | None:intergenic |
TGATTAATTATTCTATAAAG+TGG | 0.441432 | 2_4:+573878 | Msa0307610:five_prime_UTR |
TTAAGTACCCCTGCCAGAAA+AGG | 0.441819 | 2_4:-579998 | None:intergenic |
AGCATTCTCTGACAGAAAAT+AGG | 0.442325 | 2_4:+582173 | Msa0307610:intron |
TAAGATGGTTTCTAATGAGA+TGG | 0.442420 | 2_4:+578696 | Msa0307610:CDS |
AAGCCTTGTACCAACCCAAC+CGG | 0.442678 | 2_4:-579944 | None:intergenic |
TTGAAAATTGATAGCTGAAG+TGG | 0.444492 | 2_4:+583817 | Msa0307610:three_prime_UTR |
AAGAGAAATAAATAGTGGTT+AGG | 0.445715 | 2_4:+573993 | Msa0307610:five_prime_UTR |
GAGATTCCTACTCAGGGTTA+AGG | 0.445872 | 2_4:+581452 | Msa0307610:CDS |
AACATCAAATCCTATGTTAT+GGG | 0.446784 | 2_4:+579793 | Msa0307610:CDS |
TACATTACAAAATACGATAG+TGG | 0.449834 | 2_4:+582946 | Msa0307610:CDS |
TCATCTGGTTGGGCAAGTCT+GGG | 0.450323 | 2_4:+581384 | Msa0307610:CDS |
CCTATATGGTACACGAATGT+TGG | 0.450349 | 2_4:-579855 | None:intergenic |
GCATATACCTTTGGAGTCAC+TGG | 0.450593 | 2_4:+576768 | Msa0307610:CDS |
ACCGTTGCGTTGTGTGCAAT+AGG | 0.452936 | 2_4:-582982 | None:intergenic |
GTAAGCGTAACCGCCCTAAC+TGG | 0.452991 | 2_4:-573654 | None:intergenic |
AGTCAGGTTAAAAGAGGTAG+AGG | 0.455911 | 2_4:+582268 | Msa0307610:CDS |
CTCCAGCCCACCAGAGGACA+AGG | 0.456637 | 2_4:+583354 | Msa0307610:CDS |
TGCACTGGATCGGTCACATC+AGG | 0.458565 | 2_4:-583614 | None:intergenic |
GTGTACACAAACGCACGTTC+TGG | 0.458695 | 2_4:+574086 | Msa0307610:five_prime_UTR |
TTTGTCAAGTTTCATAGTAT+AGG | 0.458860 | 2_4:+575362 | Msa0307610:five_prime_UTR |
TCGCACACTGAGTCCGACTT+TGG | 0.459007 | 2_4:+583529 | Msa0307610:CDS |
GATTTGTTCCCTCTCCTAGC+TGG | 0.459156 | 2_4:+575559 | Msa0307610:CDS |
CATACCATACAGAAGTTCCT+AGG | 0.461239 | 2_4:+581502 | Msa0307610:CDS |
CTGACATAGATACAAGGAAA+AGG | 0.462049 | 2_4:+578746 | Msa0307610:CDS |
AGATGAACAATGTGGAAAGA+TGG | 0.464525 | 2_4:+583261 | Msa0307610:CDS |
GGAGCATTCAGATGGGCTTG+GGG | 0.465800 | 2_4:-583335 | None:intergenic |
CAGAAAATGTAGCCATCTTA+CGG | 0.467606 | 2_4:-579889 | None:intergenic |
GATTTATGAACAATTGCGTT+CGG | 0.468079 | 2_4:+583288 | Msa0307610:CDS |
TATTCCAGAGATTCCTACTC+AGG | 0.471830 | 2_4:+581445 | Msa0307610:CDS |
TTAAAGAACACAAAAGCAGC+TGG | 0.472385 | 2_4:-579731 | None:intergenic |
ACCATTGAGAATGTCGAAGA+AGG | 0.477723 | 2_4:+576799 | Msa0307610:CDS |
ACTACATAAGCATATACCTT+TGG | 0.478047 | 2_4:+576759 | Msa0307610:CDS |
TACGCTTACACAATTGTGGT+TGG | 0.481138 | 2_4:+573668 | Msa0307610:five_prime_UTR |
CCTGTGAATTATTACGGTAA+AGG | 0.482288 | 2_4:+576733 | Msa0307610:CDS |
TGTAAGAAGAGTAGATCAAA+TGG | 0.483895 | 2_4:+582240 | Msa0307610:CDS |
CCTTTGCAAGTGTTGCAGGC+AGG | 0.484817 | 2_4:-581099 | None:intergenic |
ACCTTCTTCGACATTCTCAA+TGG | 0.487024 | 2_4:-576800 | None:intergenic |
ACATTACAAAATACGATAGT+GGG | 0.487202 | 2_4:+582947 | Msa0307610:CDS |
CTGAACCACACGATGTTCAC+TGG | 0.487471 | 2_4:+579831 | Msa0307610:CDS |
CATGAACATCTAATTAAAGA+TGG | 0.487890 | 2_4:+583635 | Msa0307610:CDS |
TAGAGGTGCCAGAATAGAAC+AGG | 0.488517 | 2_4:-581553 | None:intergenic |
GTAAAATGACTTAGACTTGG+AGG | 0.488885 | 2_4:-577789 | None:intergenic |
GTACCAACCCAACCGGGAAA+AGG | 0.490209 | 2_4:-579937 | None:intergenic |
CAGCAACATGGCACAACACC+TGG | 0.490933 | 2_4:-578649 | None:intergenic |
GAGTCCGACTTTGGATATAT+CGG | 0.493012 | 2_4:+583538 | Msa0307610:CDS |
CAATCCCCTTGTCCTCTGGT+GGG | 0.494251 | 2_4:-583360 | None:intergenic |
GATATTGGCTATTGGTGGCT+TGG | 0.497397 | 2_4:+575614 | Msa0307610:CDS |
GAGAATGAGATATTGGCTAT+TGG | 0.497619 | 2_4:+575606 | Msa0307610:CDS |
TCATGATTGGTACGCGATTG+TGG | 0.501597 | 2_4:-573804 | None:intergenic |
TAGACACGTTGATTTCTGGC+TGG | 0.504415 | 2_4:+575533 | Msa0307610:CDS |
TGCAAAGGCAGTGCCAGCTC+AGG | 0.505832 | 2_4:+581114 | Msa0307610:CDS |
TCTAGATAAACCACCTGAGC+TGG | 0.506046 | 2_4:-581127 | None:intergenic |
AAACGCTCCACAGTTTCAGC+TGG | 0.507858 | 2_4:+583054 | Msa0307610:CDS |
TCGGAAAATAGTTGCAAGCC+AGG | 0.508564 | 2_4:+578631 | Msa0307610:CDS |
CAGAGGACAAGGGGATTGCT+GGG | 0.509600 | 2_4:+583365 | Msa0307610:CDS |
TGGAATAGATTGTATAAAAG+AGG | 0.511141 | 2_4:-581429 | None:intergenic |
GAAAGCTCCTTACAAAGTAA+AGG | 0.511239 | 2_4:-577625 | None:intergenic |
TTGGATATATCGGTACTTGG+TGG | 0.513625 | 2_4:+583548 | Msa0307610:CDS |
TCAGATGGGCTTGGGGCATG+CGG | 0.514701 | 2_4:-583328 | None:intergenic |
GAGGAGAGTCAGGTTAAAAG+AGG | 0.517218 | 2_4:+582262 | Msa0307610:CDS |
AGACTTAGAGGTCAATGAGT+TGG | 0.517437 | 2_4:+582327 | Msa0307610:CDS |
TTCTTATTCAATGTACAAGC+GGG | 0.517512 | 2_4:-583587 | None:intergenic |
AAGATGGTTTCTAATGAGAT+GGG | 0.517681 | 2_4:+578697 | Msa0307610:CDS |
GGACTCAGTGTGCGATGGAT+AGG | 0.519782 | 2_4:-583521 | None:intergenic |
TTCTTGTCCGATCAATTCCC+TGG | 0.520696 | 2_4:+577814 | Msa0307610:CDS |
ACTTCAGAAGATATCGAGAA+AGG | 0.520959 | 2_4:+583388 | Msa0307610:CDS |
TGCTCAACTTATCGCGCTTG+GGG | 0.522102 | 2_4:+583020 | Msa0307610:CDS |
AAGTACACATTAACATTGCT+GGG | 0.522875 | 2_4:-575483 | None:intergenic |
GTGGGCTGGAGCATTCAGAT+GGG | 0.523832 | 2_4:-583342 | None:intergenic |
ACTTTGGATATATCGGTACT+TGG | 0.524263 | 2_4:+583545 | Msa0307610:CDS |
TTTAATATCCAGCTAGGAGA+GGG | 0.528067 | 2_4:-575567 | None:intergenic |
CGGTTACGCTTACACAATTG+TGG | 0.529156 | 2_4:+573664 | Msa0307610:five_prime_UTR |
GCAAATTTGGATCCGTAAGA+TGG | 0.529157 | 2_4:+579877 | Msa0307610:CDS |
CTAGGAACTTCTGTATGGTA+TGG | 0.529861 | 2_4:-581501 | None:intergenic |
GTTGAAAATAGCATCATCAA+TGG | 0.531058 | 2_4:-580932 | None:intergenic |
TGACATAGATACAAGGAAAA+GGG | 0.531137 | 2_4:+578747 | Msa0307610:CDS |
CTGAATTGCTTCTAAATACT+GGG | 0.535226 | 2_4:-583140 | None:intergenic |
CTAGCTGGATATTAAAAGCA+TGG | 0.537486 | 2_4:+575574 | Msa0307610:CDS |
CAAGGTACTTAAAGATTCAT+CGG | 0.537558 | 2_4:+578612 | Msa0307610:CDS |
ATTTAGAAGCAATTCAGCAC+AGG | 0.537895 | 2_4:+583146 | Msa0307610:CDS |
ATAGCCTAGGAACTTCTGTA+TGG | 0.540482 | 2_4:-581506 | None:intergenic |
GATAGCTGAAGTGGCTATTG+AGG | 0.544847 | 2_4:+583826 | Msa0307610:three_prime_UTR |
TATGTGAGGCGGGTGGTGAC+TGG | 0.546237 | 2_4:+580863 | Msa0307610:CDS |
AGAATTCTTCATCCGTGCAC+TGG | 0.549877 | 2_4:+574244 | Msa0307610:five_prime_UTR |
CTTCTTACAACGGCATCTAC+GGG | 0.551114 | 2_4:-582226 | None:intergenic |
CCTTTACCGTAATAATTCAC+AGG | 0.551530 | 2_4:-576733 | None:intergenic |
AACCATCTTAAAAGAATCTG+TGG | 0.551932 | 2_4:-578683 | None:intergenic |
GTCCTATTTCCCGCAGTGGA+AGG | 0.553291 | 2_4:+580963 | Msa0307610:CDS |
TTGCAGCCAATATGTGAGGC+GGG | 0.553388 | 2_4:+580853 | Msa0307610:intron |
AGTGTGCGATGGATAGGTCC+TGG | 0.558406 | 2_4:-583515 | None:intergenic |
AAGAATGGTAACAATGAGCA+AGG | 0.559742 | 2_4:-583088 | None:intergenic |
AATAAATCCAGCTGAAACTG+TGG | 0.560944 | 2_4:-583061 | None:intergenic |
ATGTTAATGTGTACTTTGCA+CGG | 0.561803 | 2_4:+575490 | Msa0307610:CDS |
GAAAAGGAACACAAGCATGA+AGG | 0.562241 | 2_4:-579921 | None:intergenic |
ATGTCTGTCGCCCATAACAT+AGG | 0.562277 | 2_4:-579803 | None:intergenic |
CAAAATGTAAGTCGTGAAGA+AGG | 0.562577 | 2_4:-581361 | None:intergenic |
GAAATCGTTTCCTACAGTAC+TGG | 0.564107 | 2_4:-583116 | None:intergenic |
CCAGCCCACCAGAGGACAAG+GGG | 0.566661 | 2_4:+583356 | Msa0307610:CDS |
CTTCCACGTGGCAAACAGCA+AGG | 0.571073 | 2_4:-573693 | None:intergenic |
CATAGTATAGGGAGCAAGGA+TGG | 0.571441 | 2_4:+575374 | Msa0307610:exon |
TTATCTTGTTTACCGAAACC+AGG | 0.571874 | 2_4:+581611 | Msa0307610:CDS |
AAGAAGAGTAGATCAAATGG+AGG | 0.572060 | 2_4:+582243 | Msa0307610:CDS |
GAAGGAAGAAAAGTGCATGT+TGG | 0.576960 | 2_4:+580981 | Msa0307610:CDS |
GTGTGAAGAGAAATAAATAG+TGG | 0.577831 | 2_4:+573988 | Msa0307610:five_prime_UTR |
CATCTCGTGGCCAGTTAGGG+CGG | 0.580608 | 2_4:+573644 | Msa0307610:five_prime_UTR |
GAAAATAGCATCATCAATGG+TGG | 0.583047 | 2_4:-580929 | None:intergenic |
GTTTCATAGTATAGGGAGCA+AGG | 0.583254 | 2_4:+575370 | Msa0307610:five_prime_UTR |
TAAAGAACACAAAAGCAGCT+GGG | 0.584910 | 2_4:-579730 | None:intergenic |
TAGCTGGATATTAAAAGCAT+GGG | 0.585769 | 2_4:+575575 | Msa0307610:CDS |
TTGATCTACTCTTCTTACAA+CGG | 0.585966 | 2_4:-582236 | None:intergenic |
AAGTCGGACTCAGTGTGCGA+TGG | 0.587730 | 2_4:-583526 | None:intergenic |
ATAGCTGAAGTGGCTATTGA+GGG | 0.589675 | 2_4:+583827 | Msa0307610:three_prime_UTR |
ATAGTAAAATGACTTAGACT+TGG | 0.590594 | 2_4:-577792 | None:intergenic |
ATTCTTATTCAATGTACAAG+CGG | 0.590606 | 2_4:-583588 | None:intergenic |
AATGAGATATTGGCTATTGG+TGG | 0.592820 | 2_4:+575609 | Msa0307610:CDS |
CACCAAATGATTTATAAGTG+TGG | 0.593061 | 2_4:+577909 | Msa0307610:CDS |
TATGTTATGGGCGACAGACA+TGG | 0.593760 | 2_4:+579805 | Msa0307610:CDS |
CCTGCCTGCAACACTTGCAA+AGG | 0.595894 | 2_4:+581099 | Msa0307610:CDS |
GTATGATTCGCTTATAGACC+AGG | 0.595966 | 2_4:-577832 | None:intergenic |
TTTGCAGCCAATATGTGAGG+CGG | 0.597047 | 2_4:+580852 | Msa0307610:intron |
AATCCAAACAGTAATAGCCT+AGG | 0.599075 | 2_4:-581519 | None:intergenic |
TATCATCCTTAACCCTGAGT+AGG | 0.601703 | 2_4:-581458 | None:intergenic |
ATTCCAGAGATTCCTACTCA+GGG | 0.601827 | 2_4:+581446 | Msa0307610:CDS |
GCCTATTGCACACAACGCAA+CGG | 0.603422 | 2_4:+582981 | Msa0307610:CDS |
AGCCTTGTACCAACCCAACC+GGG | 0.604843 | 2_4:-579943 | None:intergenic |
TAGATGTTCATGCACTGGAT+CGG | 0.605985 | 2_4:-583624 | None:intergenic |
CCCGAAACACTTTCATCTCG+TGG | 0.609632 | 2_4:+573631 | None:intergenic |
GCAAAACAAAGAAGAAAGTG+AGG | 0.610997 | 2_4:-574160 | None:intergenic |
GTCATTAAACAGACTAGACC+AGG | 0.622117 | 2_4:+583497 | Msa0307610:CDS |
AGTGCAGATGACACCAGTGA+TGG | 0.623326 | 2_4:-576698 | None:intergenic |
AATTAATATCGTTGTGTGTG+TGG | 0.624038 | 2_4:+575425 | Msa0307610:CDS |
AATAAAACCAATATCACACT+TGG | 0.624954 | 2_4:-580893 | None:intergenic |
TTCGGTAAACAAGATAAGCA+AGG | 0.625117 | 2_4:-581605 | None:intergenic |
AAACCAATATCACACTTGGT+AGG | 0.625680 | 2_4:-580889 | None:intergenic |
ACAAGAGCATTACTAAGTTG+AGG | 0.625796 | 2_4:+577745 | Msa0307610:CDS |
CATTACAAAATACGATAGTG+GGG | 0.627166 | 2_4:+582948 | Msa0307610:CDS |
GACAAATATCATAAACGATG+AGG | 0.628139 | 2_4:-575345 | None:intergenic |
TTATAGACCAGGGAATTGAT+CGG | 0.638485 | 2_4:-577821 | None:intergenic |
TCCAGCCCACCAGAGGACAA+GGG | 0.640270 | 2_4:+583355 | Msa0307610:CDS |
CGGGGCTGAACATATGTGCA+AGG | 0.647655 | 2_4:+578594 | Msa0307610:CDS |
TGGCAAAGTTCAGAAACTGA+AGG | 0.650027 | 2_4:+577929 | Msa0307610:CDS |
GCGCCTTGCTGTTTGCCACG+TGG | 0.650981 | 2_4:+573690 | Msa0307610:five_prime_UTR |
GCTACACTGACATAGATACA+AGG | 0.652019 | 2_4:+578740 | Msa0307610:CDS |
GATAAGAAAGATGAACAATG+TGG | 0.654302 | 2_4:+583253 | Msa0307610:CDS |
GAATTTCCCAAACAGCAACA+TGG | 0.654878 | 2_4:-578661 | None:intergenic |
AATACATCCAGTGACTCCAA+AGG | 0.656786 | 2_4:-576775 | None:intergenic |
AGAATGGTAACAATGAGCAA+GGG | 0.657327 | 2_4:-583087 | None:intergenic |
GAGGGTCCTATTTCCCGCAG+TGG | 0.665419 | 2_4:+580959 | Msa0307610:CDS |
TGAATGCTCCAGCCCACCAG+AGG | 0.667039 | 2_4:+583348 | Msa0307610:CDS |
AGTACCGATATATCCAAAGT+CGG | 0.675445 | 2_4:-583542 | None:intergenic |
TATGATTCGCTTATAGACCA+GGG | 0.679006 | 2_4:-577831 | None:intergenic |
ATTACAAAATACGATAGTGG+GGG | 0.699626 | 2_4:+582949 | Msa0307610:CDS |
GTAACGACTCAATGACAACA+AGG | 0.706716 | 2_4:-579620 | None:intergenic |
TTGGACCAGTGAACATCGTG+TGG | 0.707722 | 2_4:-579836 | None:intergenic |
CAGCCAATATGTGAGGCGGG+TGG | 0.743442 | 2_4:+580856 | Msa0307610:intron |
GAGACAGATAGGTTGATGCG+TGG | 0.768122 | 2_4:-577887 | None:intergenic |
GGAGGGATGGATCTTCCACG+TGG | 0.777476 | 2_4:-573705 | None:intergenic |
TTAATGTGTACTTTGCACGG+AGG | 0.779643 | 2_4:+575493 | Msa0307610:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAATATTAATTCATGAT+TGG | - | chr2_4:573820-573839 | None:intergenic | 10.0% |
!! | AAATAAAATAAAAACCTAAT+AGG | + | chr2_4:576594-576613 | Msa0307610:intron | 10.0% |
!!! | TATTGTATTTTGAATTTTTT+AGG | - | chr2_4:578137-578156 | None:intergenic | 10.0% |
!! | AAAATTATAGTACATTTATA+TGG | - | chr2_4:578177-578196 | None:intergenic | 10.0% |
!!! | TATAAATGTACTATAATTTT+TGG | + | chr2_4:578177-578196 | Msa0307610:intron | 10.0% |
!!! | TTATTGATTCTATTTTATAT+GGG | - | chr2_4:578311-578330 | None:intergenic | 10.0% |
!!! | TATTTACTGTATTTTATTTT+AGG | + | chr2_4:581740-581759 | Msa0307610:intron | 10.0% |
!!! | TATTTTATTTTAGGAATTAA+GGG | + | chr2_4:581749-581768 | Msa0307610:intron | 10.0% |
!! | TATAATATAGGAATTATTAA+AGG | + | chr2_4:582503-582522 | Msa0307610:intron | 10.0% |
!! | AAATGTTAAAAATAAATCAT+GGG | - | chr2_4:582875-582894 | None:intergenic | 10.0% |
!! | TAAATGTTAAAAATAAATCA+TGG | - | chr2_4:582876-582895 | None:intergenic | 10.0% |
!!! | ATGATTTATTTTTAACATTT+AGG | + | chr2_4:582875-582894 | Msa0307610:intron | 10.0% |
!! | TGATTAATTATTCTATAAAG+TGG | + | chr2_4:573878-573897 | Msa0307610:five_prime_UTR | 15.0% |
!! | ATGTGAATAAAAATCAAATA+GGG | - | chr2_4:573959-573978 | None:intergenic | 15.0% |
!! | AATGTGAATAAAAATCAAAT+AGG | - | chr2_4:573960-573979 | None:intergenic | 15.0% |
!!! | ATTGTTTTGATTTTTAGAAT+TGG | + | chr2_4:574783-574802 | Msa0307610:intron | 15.0% |
!!! | TTTTTAATACGTTTTGAATA+TGG | + | chr2_4:574951-574970 | Msa0307610:intron | 15.0% |
!! | TTAAATTCATTTATCATGTT+AGG | - | chr2_4:575027-575046 | None:intergenic | 15.0% |
!!! | TGATTTGAAATAACATAAAA+TGG | - | chr2_4:576569-576588 | None:intergenic | 15.0% |
!!! | CTTATTGATTCTATTTTATA+TGG | - | chr2_4:578312-578331 | None:intergenic | 15.0% |
!!! | GATTATAGTATTGATATAAA+TGG | - | chr2_4:578341-578360 | None:intergenic | 15.0% |
!! | GTAATTATATAAATCAATTC+AGG | - | chr2_4:578784-578803 | None:intergenic | 15.0% |
!!! | TTTAATTTGCTTATTTTAGA+TGG | - | chr2_4:580552-580571 | None:intergenic | 15.0% |
!! | TTATAACTTTCAAATTAGAT+TGG | + | chr2_4:580682-580701 | Msa0307610:intron | 15.0% |
!!! | TTTTAAAGAGAAAAAAAATG+TGG | + | chr2_4:580726-580745 | Msa0307610:intron | 15.0% |
!!! | TTTTTTGTTAATGTCTTATA+TGG | + | chr2_4:581034-581053 | Msa0307610:CDS | 15.0% |
!! | AAAAAATAGATCAATAAGAA+GGG | - | chr2_4:581585-581604 | None:intergenic | 15.0% |
!!! | GTATTTTATTTTAGGAATTA+AGG | + | chr2_4:581748-581767 | Msa0307610:intron | 15.0% |
!!! | ATTTTATTTTAGGAATTAAG+GGG | + | chr2_4:581750-581769 | Msa0307610:intron | 15.0% |
!!! | TAGTTTTCTTTTTATTGAAA+AGG | + | chr2_4:581821-581840 | Msa0307610:intron | 15.0% |
!! | AAATTTATTAGATATTAAGG+GGG | - | chr2_4:582023-582042 | None:intergenic | 15.0% |
!! | CAAATTTATTAGATATTAAG+GGG | - | chr2_4:582024-582043 | None:intergenic | 15.0% |
!! | CCAAATTTATTAGATATTAA+GGG | - | chr2_4:582025-582044 | None:intergenic | 15.0% |
!! | ACCAAATTTATTAGATATTA+AGG | - | chr2_4:582026-582045 | None:intergenic | 15.0% |
!! | ATTTAAGTGATTAAGTTATT+GGG | + | chr2_4:582104-582123 | Msa0307610:intron | 15.0% |
!! | ATATTTGAGAATTAGAAAAT+GGG | + | chr2_4:582674-582693 | Msa0307610:intron | 15.0% |
!! | TAAATTGTAAATTGTGTAAA+TGG | + | chr2_4:583696-583715 | Msa0307610:three_prime_UTR | 15.0% |
!!! | TCTTTAATTGGATTTTTTTT+GGG | - | chr2_4:583729-583748 | None:intergenic | 15.0% |
!!! | ATCTTTAATTGGATTTTTTT+TGG | - | chr2_4:583730-583749 | None:intergenic | 15.0% |
!!! | ATATGCTTTGAATTCAATTA+TGG | + | chr2_4:573848-573867 | Msa0307610:five_prime_UTR | 20.0% |
!!! | TGATTTTTATTCACATTACA+AGG | + | chr2_4:573963-573982 | Msa0307610:five_prime_UTR | 20.0% |
!! | TGTTTCTTATAGGAAAAATA+GGG | - | chr2_4:574869-574888 | None:intergenic | 20.0% |
!! | AATATAATAATGACACTAAC+TGG | - | chr2_4:575252-575271 | None:intergenic | 20.0% |
!!! | TAAACTAACAATGTTTTAGA+AGG | - | chr2_4:575684-575703 | None:intergenic | 20.0% |
!! | AAAATTTAATTGCATCACAT+TGG | - | chr2_4:576205-576224 | None:intergenic | 20.0% |
!! | TATGGATATATAAATGGTTA+AGG | - | chr2_4:576321-576340 | None:intergenic | 20.0% |
!! | AATGGTTATGGATATATAAA+TGG | - | chr2_4:576327-576346 | None:intergenic | 20.0% |
!! | ACAAATCTTAATAATGGTTA+TGG | - | chr2_4:576339-576358 | None:intergenic | 20.0% |
!! | AAATATGAAAAAACAAAAGG+CGG | - | chr2_4:577309-577328 | None:intergenic | 20.0% |
!! | AAAAGAAAAACAAAACTTGT+TGG | - | chr2_4:577673-577692 | None:intergenic | 20.0% |
!!! | AGCATACAAATATTTTCAAA+AGG | - | chr2_4:577966-577985 | None:intergenic | 20.0% |
!!! | TATGATTTGTAATATGATCA+AGG | + | chr2_4:578075-578094 | Msa0307610:intron | 20.0% |
!!! | GAATTTTCATTTTCATGATT+TGG | + | chr2_4:578834-578853 | Msa0307610:intron | 20.0% |
!! | GACATCATAAAAAAAAGTAA+TGG | - | chr2_4:579519-579538 | None:intergenic | 20.0% |
!! | TTTATTATCTAATGAAATGC+AGG | + | chr2_4:579587-579606 | Msa0307610:intron | 20.0% |
!!! | ACATTTTTTAACCAAAAACA+TGG | + | chr2_4:580078-580097 | Msa0307610:intron | 20.0% |
!!! | AAAAGCATATTCATCTTATT+TGG | + | chr2_4:580649-580668 | Msa0307610:intron | 20.0% |
!!! | AAAGCATATTCATCTTATTT+GGG | + | chr2_4:580650-580669 | Msa0307610:intron | 20.0% |
!! | GAAAAAATAGATCAATAAGA+AGG | - | chr2_4:581586-581605 | None:intergenic | 20.0% |
!! | TATAAGATGTGAAGATAAAA+TGG | + | chr2_4:581882-581901 | Msa0307610:intron | 20.0% |
!! | ATAAGATGTGAAGATAAAAT+GGG | + | chr2_4:581883-581902 | Msa0307610:intron | 20.0% |
!! | CCCTTAATATCTAATAAATT+TGG | + | chr2_4:582022-582041 | Msa0307610:intron | 20.0% |
!! | TTACATAAAAAAGTGAGAAA+TGG | - | chr2_4:582078-582097 | None:intergenic | 20.0% |
!! | GATTTAAGTGATTAAGTTAT+TGG | + | chr2_4:582103-582122 | Msa0307610:intron | 20.0% |
!! | TTTAAGTGATTAAGTTATTG+GGG | + | chr2_4:582105-582124 | Msa0307610:intron | 20.0% |
!! | AAATGAAACTGGTATAATAT+AGG | + | chr2_4:582491-582510 | Msa0307610:intron | 20.0% |
!! | ATATAGGAATTATTAAAGGA+TGG | + | chr2_4:582507-582526 | Msa0307610:intron | 20.0% |
!!! | TAAAGGATATTTTACACTTT+TGG | + | chr2_4:582568-582587 | Msa0307610:intron | 20.0% |
!!! | TGTATCTTCTATTTTTATCA+AGG | + | chr2_4:582641-582660 | Msa0307610:intron | 20.0% |
!! | CATATTTGAGAATTAGAAAA+TGG | + | chr2_4:582673-582692 | Msa0307610:intron | 20.0% |
!!! | TTTAATTGGATTTTTTTTGG+GGG | - | chr2_4:583727-583746 | None:intergenic | 20.0% |
!!! | CTTTAATTGGATTTTTTTTG+GGG | - | chr2_4:583728-583747 | None:intergenic | 20.0% |
! | GTGACTAAATGATTATACTT+TGG | + | chr2_4:573909-573928 | Msa0307610:five_prime_UTR | 25.0% |
!! | TTTTTATTCACATTACAAGG+TGG | + | chr2_4:573966-573985 | Msa0307610:five_prime_UTR | 25.0% |
! | AAGAGAAATAAATAGTGGTT+AGG | + | chr2_4:573993-574012 | Msa0307610:five_prime_UTR | 25.0% |
! | CGAACAAATTCAAAAACTTA+GGG | + | chr2_4:574024-574043 | Msa0307610:five_prime_UTR | 25.0% |
!!! | AAACTTAGGGTTTTTGATTT+TGG | + | chr2_4:574037-574056 | Msa0307610:five_prime_UTR | 25.0% |
!!! | GTTTTGTTCAATTTTCTTCA+CGG | + | chr2_4:574483-574502 | Msa0307610:intron | 25.0% |
!! | CTCAAAATGTTCAATTTTGT+TGG | - | chr2_4:574724-574743 | None:intergenic | 25.0% |
! | GTGTTTCTTATAGGAAAAAT+AGG | - | chr2_4:574870-574889 | None:intergenic | 25.0% |
!! | AAATAATCCATAACTTGCAT+TGG | + | chr2_4:575194-575213 | Msa0307610:intron | 25.0% |
!! | AATAATCCATAACTTGCATT+GGG | + | chr2_4:575195-575214 | Msa0307610:intron | 25.0% |
!!! | GATTCAATTTTAACTCTTTC+AGG | + | chr2_4:575290-575309 | Msa0307610:intron | 25.0% |
! | TTTGTCAAGTTTCATAGTAT+AGG | + | chr2_4:575362-575381 | Msa0307610:five_prime_UTR | 25.0% |
! | TTGTCAAGTTTCATAGTATA+GGG | + | chr2_4:575363-575382 | Msa0307610:five_prime_UTR | 25.0% |
! | ATTTCTAATACCTAGATAAG+TGG | + | chr2_4:575813-575832 | Msa0307610:intron | 25.0% |
!!! | TCATTATTGATGATGAAACA+AGG | - | chr2_4:576044-576063 | None:intergenic | 25.0% |
! | TCAATAATGATTTCTCATGA+AGG | + | chr2_4:576054-576073 | Msa0307610:intron | 25.0% |
!! | TTGATTGCATATTTTTCTCT+TGG | + | chr2_4:576159-576178 | Msa0307610:intron | 25.0% |
! | ATGCAGAAAATCATCATTAT+TGG | - | chr2_4:576277-576296 | None:intergenic | 25.0% |
!! | AAAGATTATTTCTTACAAGG+TGG | - | chr2_4:577088-577107 | None:intergenic | 25.0% |
!! | CAGAAAGATTATTTCTTACA+AGG | - | chr2_4:577091-577110 | None:intergenic | 25.0% |
!!! | GCCTTTTGTTTTTTCATATT+TGG | + | chr2_4:577308-577327 | Msa0307610:intron | 25.0% |
! | GCCAAATATGAAAAAACAAA+AGG | - | chr2_4:577312-577331 | None:intergenic | 25.0% |
! | GCATAATAAACTCCAAATAA+GGG | - | chr2_4:577370-577389 | None:intergenic | 25.0% |
! | AGCATAATAAACTCCAAATA+AGG | - | chr2_4:577371-577390 | None:intergenic | 25.0% |
! | AATTAAAGTTACTATAGACC+AGG | + | chr2_4:577443-577462 | Msa0307610:intron | 25.0% |
! | ATTAAAGTTACTATAGACCA+GGG | + | chr2_4:577444-577463 | Msa0307610:intron | 25.0% |
!! | TATTTCTTCTTTTGTATGTC+AGG | + | chr2_4:577549-577568 | Msa0307610:intron | 25.0% |
! | GTTGGTTATTATGCTAAAAT+AGG | - | chr2_4:577655-577674 | None:intergenic | 25.0% |
!! | GACTAGTCATATTTAAGAAT+TGG | - | chr2_4:577702-577721 | None:intergenic | 25.0% |
!! | CTTAAATATGACTAGTCAAT+TGG | + | chr2_4:577705-577724 | Msa0307610:intron | 25.0% |
! | ATAGTAAAATGACTTAGACT+TGG | - | chr2_4:577795-577814 | None:intergenic | 25.0% |
!! | TTTTCTTTTTGTTCAAGCTA+TGG | + | chr2_4:578009-578028 | Msa0307610:intron | 25.0% |
!! | TTTCTTTTTGTTCAAGCTAT+GGG | + | chr2_4:578010-578029 | Msa0307610:intron | 25.0% |
! | ACTGTAAAGATTAATCTCTT+AGG | + | chr2_4:578226-578245 | Msa0307610:intron | 25.0% |
! | TAAAGATTAATCTCTTAGGT+CGG | + | chr2_4:578230-578249 | Msa0307610:intron | 25.0% |
!!! | TATTTGATTTTTGTGTAACG+TGG | + | chr2_4:578986-579005 | Msa0307610:intron | 25.0% |
! | TTATGAGCTCATTCATTTAA+TGG | + | chr2_4:579102-579121 | Msa0307610:intron | 25.0% |
! | ATTTAATGGAAGTGATTCTT+TGG | + | chr2_4:579116-579135 | Msa0307610:intron | 25.0% |
! | GAGTTAGAAATGAAATTGTT+AGG | - | chr2_4:579144-579163 | None:intergenic | 25.0% |
! | GTTCTATCATAAACCAAATT+TGG | - | chr2_4:579404-579423 | None:intergenic | 25.0% |
! | TTATGATGTCTCAACTTAAT+AGG | + | chr2_4:579529-579548 | Msa0307610:intron | 25.0% |
!! | ACTAATTTATGCTTCAAGTT+TGG | + | chr2_4:579689-579708 | Msa0307610:intron | 25.0% |
!!! | CTTTTGTGTTCTTTAAAAGT+CGG | + | chr2_4:579738-579757 | Msa0307610:CDS | 25.0% |
! | AAACATCAAATCCTATGTTA+TGG | + | chr2_4:579792-579811 | Msa0307610:CDS | 25.0% |
! | AACATCAAATCCTATGTTAT+GGG | + | chr2_4:579793-579812 | Msa0307610:CDS | 25.0% |
!! | TGCATTTTTATATGCTACAT+AGG | + | chr2_4:580150-580169 | Msa0307610:intron | 25.0% |
!! | TAATATGACAATTAGCTTCA+CGG | + | chr2_4:580461-580480 | Msa0307610:intron | 25.0% |
! | GATATATAAACACAAAACGT+TGG | - | chr2_4:580523-580542 | None:intergenic | 25.0% |
!! | AAGCATATTCATCTTATTTG+GGG | + | chr2_4:580651-580670 | Msa0307610:intron | 25.0% |
! | TAACTTTCAAATTAGATTGG+AGG | + | chr2_4:580685-580704 | Msa0307610:intron | 25.0% |
! | TTACCATATTAAATCAGACA+TGG | + | chr2_4:580750-580769 | Msa0307610:intron | 25.0% |
! | ATTCCATGTCTGATTTAATA+TGG | - | chr2_4:580756-580775 | None:intergenic | 25.0% |
! | ATTAAATCAGACATGGAATA+TGG | + | chr2_4:580757-580776 | Msa0307610:intron | 25.0% |
! | AATAAAACCAATATCACACT+TGG | - | chr2_4:580896-580915 | None:intergenic | 25.0% |
!!! | TGATTAACTAGGTTTTTTCA+TGG | + | chr2_4:581327-581346 | Msa0307610:intron | 25.0% |
! | TGGAATAGATTGTATAAAAG+AGG | - | chr2_4:581432-581451 | None:intergenic | 25.0% |
! | TATTACTGTTTGGATTTCTT+GGG | + | chr2_4:581526-581545 | Msa0307610:CDS | 25.0% |
! | TAATAATACTAACCTGGTTT+CGG | - | chr2_4:581626-581645 | None:intergenic | 25.0% |
! | ATGTGATAATAATACTAACC+TGG | - | chr2_4:581632-581651 | None:intergenic | 25.0% |
!! | ATGTTTCTCTTCTCTTTTTA+TGG | + | chr2_4:581650-581669 | Msa0307610:intron | 25.0% |
! | TAAGATGTGAAGATAAAATG+GGG | + | chr2_4:581884-581903 | Msa0307610:intron | 25.0% |
!!! | TTTATTTTTGAGAGAATGGT+GGG | + | chr2_4:582146-582165 | Msa0307610:intron | 25.0% |
!! | TTTTCTAATGGTTTCTCTAA+TGG | - | chr2_4:582308-582327 | None:intergenic | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | - | chr2_4:582355-582374 | None:intergenic | 25.0% |
!!! | TTTGTTTTGACAAATGAAAC+TGG | + | chr2_4:582480-582499 | Msa0307610:intron | 25.0% |
! | GTGTAAAATATCCTTTACTA+AGG | - | chr2_4:582565-582584 | None:intergenic | 25.0% |
! | TACATTACAAAATACGATAG+TGG | + | chr2_4:582946-582965 | Msa0307610:CDS | 25.0% |
! | ACATTACAAAATACGATAGT+GGG | + | chr2_4:582947-582966 | Msa0307610:CDS | 25.0% |
!!! | GTTTTAGATTCTTATTGACT+TGG | + | chr2_4:583231-583250 | Msa0307610:intron | 25.0% |
!! | AAGGTTTGTTTGCTTTATAA+TGG | + | chr2_4:583407-583426 | Msa0307610:intron | 25.0% |
!!! | ATGTTTGCTTTTCATTTTTC+AGG | + | chr2_4:583470-583489 | Msa0307610:intron | 25.0% |
! | ATTCTTATTCAATGTACAAG+CGG | - | chr2_4:583591-583610 | None:intergenic | 25.0% |
! | CATGAACATCTAATTAAAGA+TGG | + | chr2_4:583635-583654 | Msa0307610:CDS | 25.0% |
!!! | TTAATTGGATTTTTTTTGGG+GGG | - | chr2_4:583726-583745 | None:intergenic | 25.0% |
! | GTTATCTGTCTATCTTTAAT+TGG | - | chr2_4:583741-583760 | None:intergenic | 25.0% |
!! | AATGCACAACATTTTTATTC+TGG | - | chr2_4:583785-583804 | None:intergenic | 25.0% |
GATGAAAGAGAAAAATAAGC+GGG | - | chr2_4:573729-573748 | None:intergenic | 30.0% | |
CGATGAAAGAGAAAAATAAG+CGG | - | chr2_4:573730-573749 | None:intergenic | 30.0% | |
GTGTGAAGAGAAATAAATAG+TGG | + | chr2_4:573988-574007 | Msa0307610:five_prime_UTR | 30.0% | |
GCGAACAAATTCAAAAACTT+AGG | + | chr2_4:574023-574042 | Msa0307610:five_prime_UTR | 30.0% | |
!!! | TTCAACTACTCTTTTGGTTT+TGG | + | chr2_4:574205-574224 | Msa0307610:five_prime_UTR | 30.0% |
!! | GTTTTTCAAATTCCGATTGA+AGG | + | chr2_4:574518-574537 | Msa0307610:intron | 30.0% |
TCAATGTATTGTGTAAGTGT+CGG | - | chr2_4:574594-574613 | None:intergenic | 30.0% | |
!! | TTGAACATTTTGAGTGTGTT+TGG | + | chr2_4:574730-574749 | Msa0307610:intron | 30.0% |
!! | TGAACATTTTGAGTGTGTTT+GGG | + | chr2_4:574731-574750 | Msa0307610:intron | 30.0% |
ATGTTAAGCATGCTATTGAT+TGG | + | chr2_4:575090-575109 | Msa0307610:intron | 30.0% | |
!!! | ATTTTAACTCTTTCAGGTGA+TGG | + | chr2_4:575296-575315 | Msa0307610:intron | 30.0% |
GACAAATATCATAAACGATG+AGG | - | chr2_4:575348-575367 | None:intergenic | 30.0% | |
AATTAATATCGTTGTGTGTG+TGG | + | chr2_4:575425-575444 | Msa0307610:CDS | 30.0% | |
AAGTACACATTAACATTGCT+GGG | - | chr2_4:575486-575505 | None:intergenic | 30.0% | |
AAAGTACACATTAACATTGC+TGG | - | chr2_4:575487-575506 | None:intergenic | 30.0% | |
ATGTTAATGTGTACTTTGCA+CGG | + | chr2_4:575490-575509 | Msa0307610:CDS | 30.0% | |
! | TAGCTGGATATTAAAAGCAT+GGG | + | chr2_4:575575-575594 | Msa0307610:CDS | 30.0% |
AACATCTGAGAATGAGATAT+TGG | + | chr2_4:575599-575618 | Msa0307610:CDS | 30.0% | |
!! | TTTCAGGTTAAAGTAAGACT+CGG | - | chr2_4:575770-575789 | None:intergenic | 30.0% |
ATTAGAAATCCTTACATGGT+AGG | - | chr2_4:575802-575821 | None:intergenic | 30.0% | |
AGGTATTAGAAATCCTTACA+TGG | - | chr2_4:575806-575825 | None:intergenic | 30.0% | |
!!! | TTTTTTCAAATTCCACTCTC+TGG | + | chr2_4:575867-575886 | Msa0307610:intron | 30.0% |
TATTCCTGACATGAATTCTT+AGG | - | chr2_4:575907-575926 | None:intergenic | 30.0% | |
CATTGACCAGAAAATTTGTA+TGG | - | chr2_4:575962-575981 | None:intergenic | 30.0% | |
AATCAAGTGTGCATCTTAAA+TGG | - | chr2_4:576145-576164 | None:intergenic | 30.0% | |
GTGAGCACAAATCTTAATAA+TGG | - | chr2_4:576345-576364 | None:intergenic | 30.0% | |
ACGCCTAATTGATATAGATA+TGG | + | chr2_4:576400-576419 | Msa0307610:intron | 30.0% | |
CTGCCATATCTATATCAATT+AGG | - | chr2_4:576406-576425 | None:intergenic | 30.0% | |
!! | CGATTTTGTTTAAGCCTATT+AGG | - | chr2_4:576611-576630 | None:intergenic | 30.0% |
AAAATCGATTGTTCATCTTG+AGG | + | chr2_4:576624-576643 | Msa0307610:intron | 30.0% | |
ACTACATAAGCATATACCTT+TGG | + | chr2_4:576759-576778 | Msa0307610:CDS | 30.0% | |
TGTAAGTGCTAATTATGTGA+TGG | + | chr2_4:576856-576875 | Msa0307610:intron | 30.0% | |
TAGTAAACATTACAGATGTG+TGG | + | chr2_4:577114-577133 | Msa0307610:intron | 30.0% | |
ACAATGCTCAAAGAAAAATG+TGG | + | chr2_4:577262-577281 | Msa0307610:intron | 30.0% | |
TTACTTGAGTTTCCCTTATT+TGG | + | chr2_4:577355-577374 | Msa0307610:intron | 30.0% | |
GGTTATTATGCTAAAATAGG+CGG | - | chr2_4:577652-577671 | None:intergenic | 30.0% | |
!! | GTCAATTGGTGTTTTTGTTT+AGG | + | chr2_4:577719-577738 | Msa0307610:intron | 30.0% |
CACCAAATGATTTATAAGTG+TGG | + | chr2_4:577909-577928 | Msa0307610:CDS | 30.0% | |
TGCCACACTTATAAATCATT+TGG | - | chr2_4:577914-577933 | None:intergenic | 30.0% | |
! | TTCTTTTTGTTCAAGCTATG+GGG | + | chr2_4:578011-578030 | Msa0307610:intron | 30.0% |
TTGAAGTTGAGATAACAACA+TGG | + | chr2_4:578101-578120 | Msa0307610:intron | 30.0% | |
AAAGATTAATCTCTTAGGTC+GGG | + | chr2_4:578231-578250 | Msa0307610:intron | 30.0% | |
TATTTAAATCTTCTTTCCCC+AGG | + | chr2_4:578570-578589 | Msa0307610:intron | 30.0% | |
! | CAAGGTACTTAAAGATTCAT+CGG | + | chr2_4:578612-578631 | Msa0307610:CDS | 30.0% |
!! | TTCCACAGATTCTTTTAAGA+TGG | + | chr2_4:578681-578700 | Msa0307610:CDS | 30.0% |
AACCATCTTAAAAGAATCTG+TGG | - | chr2_4:578686-578705 | None:intergenic | 30.0% | |
TAAGATGGTTTCTAATGAGA+TGG | + | chr2_4:578696-578715 | Msa0307610:CDS | 30.0% | |
AAGATGGTTTCTAATGAGAT+GGG | + | chr2_4:578697-578716 | Msa0307610:CDS | 30.0% | |
TGACATAGATACAAGGAAAA+GGG | + | chr2_4:578747-578766 | Msa0307610:CDS | 30.0% | |
ATATATAATCATCGATGGAG+CGG | + | chr2_4:579013-579032 | Msa0307610:intron | 30.0% | |
TAATGAATGAGTGATTAAGC+AGG | - | chr2_4:579170-579189 | None:intergenic | 30.0% | |
TAAGCTCAGTGTTACAAAAA+TGG | - | chr2_4:579201-579220 | None:intergenic | 30.0% | |
ATATATGAACCTGTCATTGT+TGG | + | chr2_4:579313-579332 | Msa0307610:intron | 30.0% | |
ACAATTTATCCAACAATGAC+AGG | - | chr2_4:579325-579344 | None:intergenic | 30.0% | |
TTTGCATTAGCACTATAGAA+AGG | + | chr2_4:579345-579364 | Msa0307610:intron | 30.0% | |
CACTATAGAAAGGATTAGAA+AGG | + | chr2_4:579355-579374 | Msa0307610:intron | 30.0% | |
AAGGATTAGAAAGGATTTAG+AGG | + | chr2_4:579364-579383 | Msa0307610:intron | 30.0% | |
! | TAATGAGTTGGATCCAAATT+TGG | + | chr2_4:579388-579407 | Msa0307610:intron | 30.0% |
TGGTTTATGATAGAACACTA+TGG | + | chr2_4:579408-579427 | Msa0307610:intron | 30.0% | |
! | TCAGAAAATGTTTCCTTTTC+TGG | + | chr2_4:579985-580004 | Msa0307610:CDS | 30.0% |
TTTAACCAAAAACATGGATC+AGG | + | chr2_4:580084-580103 | Msa0307610:intron | 30.0% | |
TGTATGTAGAGCTTCTTTAT+AGG | + | chr2_4:580190-580209 | Msa0307610:intron | 30.0% | |
! | ACTAGTTTATGATTTGTCCA+TGG | + | chr2_4:580364-580383 | Msa0307610:intron | 30.0% |
! | CTAGTTTATGATTTGTCCAT+GGG | + | chr2_4:580365-580384 | Msa0307610:intron | 30.0% |
! | TAGTTTATGATTTGTCCATG+GGG | + | chr2_4:580366-580385 | Msa0307610:intron | 30.0% |
! | ATTTTGCTTTGTAATCCCAA+TGG | + | chr2_4:580408-580427 | Msa0307610:intron | 30.0% |
AGATTCTAACTTTGTCCATT+GGG | - | chr2_4:580426-580445 | None:intergenic | 30.0% | |
AAGATTCTAACTTTGTCCAT+TGG | - | chr2_4:580427-580446 | None:intergenic | 30.0% | |
TTTCACACCATCATTCAAAT+GGG | - | chr2_4:580582-580601 | None:intergenic | 30.0% | |
! | TTTTCACACCATCATTCAAA+TGG | - | chr2_4:580583-580602 | None:intergenic | 30.0% |
! | AGCATATTCATCTTATTTGG+GGG | + | chr2_4:580652-580671 | Msa0307610:intron | 30.0% |
GTTGAAAATAGCATCATCAA+TGG | - | chr2_4:580935-580954 | None:intergenic | 30.0% | |
!!! | ATGCTATTTTCAACAGTTGA+GGG | + | chr2_4:580941-580960 | Msa0307610:CDS | 30.0% |
!! | AAGTTTTGTACTTCACAATC+TGG | + | chr2_4:581005-581024 | Msa0307610:CDS | 30.0% |
! | TTTAAAGTACACTGTCATCT+AGG | - | chr2_4:581155-581174 | None:intergenic | 30.0% |
ACAAAATGGGTCGAAATAAA+GGG | - | chr2_4:581185-581204 | None:intergenic | 30.0% | |
AACAAAATGGGTCGAAATAA+AGG | - | chr2_4:581186-581205 | None:intergenic | 30.0% | |
!! | ACTCTAGAACAGAACAAAAT+GGG | - | chr2_4:581198-581217 | None:intergenic | 30.0% |
!! | TACTCTAGAACAGAACAAAA+TGG | - | chr2_4:581199-581218 | None:intergenic | 30.0% |
! | TTACATTTTGTCATCTGGTT+GGG | + | chr2_4:581374-581393 | Msa0307610:CDS | 30.0% |
GTTAAGGATGATACACTTAA+TGG | + | chr2_4:581468-581487 | Msa0307610:CDS | 30.0% | |
CTATTACTGTTTGGATTTCT+TGG | + | chr2_4:581525-581544 | Msa0307610:CDS | 30.0% | |
!! | TTTAGGAATTAAGGGGTATT+TGG | + | chr2_4:581757-581776 | Msa0307610:intron | 30.0% |
ATGTTTCCATAAGCTATCTT+AGG | + | chr2_4:581933-581952 | Msa0307610:intron | 30.0% | |
TGTTTCCATAAGCTATCTTA+GGG | + | chr2_4:581934-581953 | Msa0307610:intron | 30.0% | |
!!! | AGGGTTTATTTTTGAGAGAA+TGG | + | chr2_4:582142-582161 | Msa0307610:intron | 30.0% |
!!! | GTTTATTTTTGAGAGAATGG+TGG | + | chr2_4:582145-582164 | Msa0307610:intron | 30.0% |
!!! | TTATTTTTGAGAGAATGGTG+GGG | + | chr2_4:582147-582166 | Msa0307610:intron | 30.0% |
TTGATCTACTCTTCTTACAA+CGG | - | chr2_4:582239-582258 | None:intergenic | 30.0% | |
TGTAAGAAGAGTAGATCAAA+TGG | + | chr2_4:582240-582259 | Msa0307610:CDS | 30.0% | |
! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr2_4:582298-582317 | None:intergenic | 30.0% |
AACCATTAGAAAAGACTTAG+AGG | + | chr2_4:582315-582334 | Msa0307610:CDS | 30.0% | |
! | TGGTTTTTGATAGAACACTA+TGG | + | chr2_4:582359-582378 | Msa0307610:intron | 30.0% |
TTATTAAAGGATGGTGAAAC+TGG | + | chr2_4:582516-582535 | Msa0307610:intron | 30.0% | |
!! | TTTTACACTTTTGGCTGAAA+TGG | + | chr2_4:582577-582596 | Msa0307610:intron | 30.0% |
TCTTATTCTTTCTTGTCAGA+TGG | + | chr2_4:582721-582740 | Msa0307610:intron | 30.0% | |
!!! | ATCACGTTTTATTTGTTGCT+AGG | + | chr2_4:582790-582809 | Msa0307610:intron | 30.0% |
CATTCATTTAATGACACAGA+AGG | - | chr2_4:582850-582869 | None:intergenic | 30.0% | |
!! | ACACGTTGATAATCTGAAAA+GGG | - | chr2_4:582927-582946 | None:intergenic | 30.0% |
!! | TACACGTTGATAATCTGAAA+AGG | - | chr2_4:582928-582947 | None:intergenic | 30.0% |
CATTACAAAATACGATAGTG+GGG | + | chr2_4:582948-582967 | Msa0307610:CDS | 30.0% | |
! | ATTACAAAATACGATAGTGG+GGG | + | chr2_4:582949-582968 | Msa0307610:CDS | 30.0% |
CTGAATTGCTTCTAAATACT+GGG | - | chr2_4:583143-583162 | None:intergenic | 30.0% | |
! | CAGAATTTAGTTTAAAGCTG+TGG | - | chr2_4:583208-583227 | None:intergenic | 30.0% |
GATAAGAAAGATGAACAATG+TGG | + | chr2_4:583253-583272 | Msa0307610:CDS | 30.0% | |
GATTTATGAACAATTGCGTT+CGG | + | chr2_4:583288-583307 | Msa0307610:CDS | 30.0% | |
TGTTTGCTTTATAATGGTTG+AGG | + | chr2_4:583413-583432 | Msa0307610:intron | 30.0% | |
TTCTTATTCAATGTACAAGC+GGG | - | chr2_4:583590-583609 | None:intergenic | 30.0% | |
TTAATTAGATGTTCATGCAC+TGG | - | chr2_4:583632-583651 | None:intergenic | 30.0% | |
! | TTGAAAATTGATAGCTGAAG+TGG | + | chr2_4:583817-583836 | Msa0307610:three_prime_UTR | 30.0% |
AAAGAGAAAAATAAGCGGGA+GGG | - | chr2_4:573725-573744 | None:intergenic | 35.0% | |
GCAAAACAAAGAAGAAAGTG+AGG | - | chr2_4:574163-574182 | None:intergenic | 35.0% | |
! | CGCTTATTCAACTACTCTTT+TGG | + | chr2_4:574199-574218 | Msa0307610:five_prime_UTR | 35.0% |
AAGAAAAATGTACCAGTGCA+CGG | - | chr2_4:574259-574278 | None:intergenic | 35.0% | |
! | TCGTTTTCTTCAATTCTGCT+TGG | + | chr2_4:574287-574306 | Msa0307610:intron | 35.0% |
TTTCTTCACGGAAACTAAGT+AGG | + | chr2_4:574495-574514 | Msa0307610:intron | 35.0% | |
TTCTTCACGGAAACTAAGTA+GGG | + | chr2_4:574496-574515 | Msa0307610:intron | 35.0% | |
CAATTATAAAGCACAGACAC+AGG | - | chr2_4:574673-574692 | None:intergenic | 35.0% | |
CTTAACAAAGGAAGAGGAAA+AGG | - | chr2_4:574809-574828 | None:intergenic | 35.0% | |
ACAAGTGCATGACTTAACAA+AGG | - | chr2_4:574821-574840 | None:intergenic | 35.0% | |
!! | ACTTGTTGTAAATCCCTGTA+TGG | + | chr2_4:574835-574854 | Msa0307610:intron | 35.0% |
GAACTTTCTTTATCATCCAG+AGG | - | chr2_4:574924-574943 | None:intergenic | 35.0% | |
! | TGCTATTGATTGGTATCTGT+TGG | + | chr2_4:575100-575119 | Msa0307610:intron | 35.0% |
! | CTTGATGCTAAGTAGCTTTT+TGG | + | chr2_4:575149-575168 | Msa0307610:intron | 35.0% |
!! | ATTCTAGACACGTTGATTTC+TGG | + | chr2_4:575529-575548 | Msa0307610:CDS | 35.0% |
TTTAATATCCAGCTAGGAGA+GGG | - | chr2_4:575570-575589 | None:intergenic | 35.0% | |
! | TTTTAATATCCAGCTAGGAG+AGG | - | chr2_4:575571-575590 | None:intergenic | 35.0% |
! | CATGCTTTTAATATCCAGCT+AGG | - | chr2_4:575576-575595 | None:intergenic | 35.0% |
CTAGCTGGATATTAAAAGCA+TGG | + | chr2_4:575574-575593 | Msa0307610:CDS | 35.0% | |
! | GAGAATGAGATATTGGCTAT+TGG | + | chr2_4:575606-575625 | Msa0307610:CDS | 35.0% |
! | AATGAGATATTGGCTATTGG+TGG | + | chr2_4:575609-575628 | Msa0307610:CDS | 35.0% |
! | TGGATGCTGTAGTTTTTGTA+AGG | + | chr2_4:575634-575653 | Msa0307610:CDS | 35.0% |
TGGTAGGTTTAGTAGATTTC+AGG | - | chr2_4:575786-575805 | None:intergenic | 35.0% | |
TCTACTAAACCTACCATGTA+AGG | + | chr2_4:575790-575809 | Msa0307610:intron | 35.0% | |
ATCTTCACTTCCACTTATCT+AGG | - | chr2_4:575826-575845 | None:intergenic | 35.0% | |
! | CATGCACCATACAAATTTTC+TGG | + | chr2_4:575953-575972 | Msa0307610:intron | 35.0% |
!! | ATTGATGATGAAACAAGGCA+AGG | - | chr2_4:576039-576058 | None:intergenic | 35.0% |
! | ATGAAGGTCAATCTTTTGAG+TGG | + | chr2_4:576070-576089 | Msa0307610:intron | 35.0% |
TTCAATGTTTGTCTTCCCTT+TGG | - | chr2_4:576101-576120 | None:intergenic | 35.0% | |
GGGAAGACAAACATTGAAAT+TGG | + | chr2_4:576103-576122 | Msa0307610:intron | 35.0% | |
GACAAACATTGAAATTGGCT+TGG | + | chr2_4:576108-576127 | Msa0307610:intron | 35.0% | |
TTGCATTGTTGTACTCTGTA+TGG | + | chr2_4:576468-576487 | Msa0307610:intron | 35.0% | |
AAAACCAAGGCAAGTAACAA+AGG | - | chr2_4:576528-576547 | None:intergenic | 35.0% | |
AACCAAACACAGTAAAACCA+AGG | - | chr2_4:576541-576560 | None:intergenic | 35.0% | |
GGAAAAAACTCGAATACTGT+GGG | - | chr2_4:576680-576699 | None:intergenic | 35.0% | |
TGGAAAAAACTCGAATACTG+TGG | - | chr2_4:576681-576700 | None:intergenic | 35.0% | |
!!! | ATTCGAGTTTTTTCCATCAC+TGG | + | chr2_4:576685-576704 | Msa0307610:CDS | 35.0% |
GTGCTTCCTGTGAATTATTA+CGG | + | chr2_4:576727-576746 | Msa0307610:CDS | 35.0% | |
CCTTTACCGTAATAATTCAC+AGG | - | chr2_4:576736-576755 | None:intergenic | 35.0% | |
CCTGTGAATTATTACGGTAA+AGG | + | chr2_4:576733-576752 | Msa0307610:CDS | 35.0% | |
ATGTCGAAGAAGGTTCAAAA+TGG | + | chr2_4:576809-576828 | Msa0307610:CDS | 35.0% | |
! | AATTCAGCTTTGTGAGATGT+GGG | - | chr2_4:576995-577014 | None:intergenic | 35.0% |
!!! | ATTTTGAGTTATTCAGCCTC+CGG | - | chr2_4:577024-577043 | None:intergenic | 35.0% |
TTCTTACAAGGTGGATATGT+TGG | - | chr2_4:577079-577098 | None:intergenic | 35.0% | |
TAGTATGTACAAGCTGAGAA+AGG | + | chr2_4:577195-577214 | Msa0307610:intron | 35.0% | |
TAAATATAGTAGAACGACCC+TGG | - | chr2_4:577464-577483 | None:intergenic | 35.0% | |
! | TTCTTTTGTATGTCAGGCTT+TGG | + | chr2_4:577555-577574 | Msa0307610:intron | 35.0% |
! | TCTTTTGTATGTCAGGCTTT+GGG | + | chr2_4:577556-577575 | Msa0307610:intron | 35.0% |
GAAAGCTCCTTACAAAGTAA+AGG | - | chr2_4:577628-577647 | None:intergenic | 35.0% | |
!! | ACAAGAGCATTACTAAGTTG+AGG | + | chr2_4:577745-577764 | Msa0307610:CDS | 35.0% |
TTGAGGCTACTACATATTAC+TGG | + | chr2_4:577762-577781 | Msa0307610:CDS | 35.0% | |
GTAAAATGACTTAGACTTGG+AGG | - | chr2_4:577792-577811 | None:intergenic | 35.0% | |
TTATAGACCAGGGAATTGAT+CGG | - | chr2_4:577824-577843 | None:intergenic | 35.0% | |
TATGATTCGCTTATAGACCA+GGG | - | chr2_4:577834-577853 | None:intergenic | 35.0% | |
! | AATCATTTGGTGAGACAGAT+AGG | - | chr2_4:577901-577920 | None:intergenic | 35.0% |
TTAATCTTTACAGTTGCACG+TGG | - | chr2_4:578220-578239 | None:intergenic | 35.0% | |
CAACGTTAAAACTCTTGAGA+GGG | - | chr2_4:578281-578300 | None:intergenic | 35.0% | |
ACAACGTTAAAACTCTTGAG+AGG | - | chr2_4:578282-578301 | None:intergenic | 35.0% | |
ATAATCAAAGCCCAAAACCA+GGG | - | chr2_4:578423-578442 | None:intergenic | 35.0% | |
CTGACATAGATACAAGGAAA+AGG | + | chr2_4:578746-578765 | Msa0307610:CDS | 35.0% | |
! | TGATTTTTGTGTAACGTGGA+CGG | + | chr2_4:578990-579009 | Msa0307610:intron | 35.0% |
GACGGATATATAATCATCGA+TGG | + | chr2_4:579008-579027 | Msa0307610:intron | 35.0% | |
ATTCTTAGACCTGTACCTAA+TGG | + | chr2_4:579067-579086 | Msa0307610:intron | 35.0% | |
AATATGAAACCTGTCAAGTG+AGG | - | chr2_4:579259-579278 | None:intergenic | 35.0% | |
TATGTGGCTAATACACAAGA+CGG | - | chr2_4:579296-579315 | None:intergenic | 35.0% | |
CAATGACAGGTTCATATATG+TGG | - | chr2_4:579312-579331 | None:intergenic | 35.0% | |
GGATTTAGAGGTTAATGAGT+TGG | + | chr2_4:579376-579395 | Msa0307610:intron | 35.0% | |
TAAAGAACACAAAAGCAGCT+GGG | - | chr2_4:579733-579752 | None:intergenic | 35.0% | |
TTAAAGAACACAAAAGCAGC+TGG | - | chr2_4:579734-579753 | None:intergenic | 35.0% | |
GTGTACCATATAGGCAAATT+TGG | + | chr2_4:579864-579883 | Msa0307610:CDS | 35.0% | |
CAGAAAATGTAGCCATCTTA+CGG | - | chr2_4:579892-579911 | None:intergenic | 35.0% | |
!! | AAAATGTTTCCTTTTCTGGC+AGG | + | chr2_4:579989-580008 | Msa0307610:CDS | 35.0% |
!! | AAATGTTTCCTTTTCTGGCA+GGG | + | chr2_4:579990-580009 | Msa0307610:CDS | 35.0% |
!! | AAGGCGTTTTTGCATCTATT+AGG | + | chr2_4:580026-580045 | Msa0307610:intron | 35.0% |
! | AAAGTCCTGATCCATGTTTT+TGG | - | chr2_4:580092-580111 | None:intergenic | 35.0% |
GTAGAGCTTCTTTATAGGTA+TGG | + | chr2_4:580195-580214 | Msa0307610:intron | 35.0% | |
!! | TATTGTAAACAGGTTTGGTG+GGG | - | chr2_4:580619-580638 | None:intergenic | 35.0% |
! | CTATTGTAAACAGGTTTGGT+GGG | - | chr2_4:580620-580639 | None:intergenic | 35.0% |
TCTATTGTAAACAGGTTTGG+TGG | - | chr2_4:580621-580640 | None:intergenic | 35.0% | |
CAGTCTATTGTAAACAGGTT+TGG | - | chr2_4:580624-580643 | None:intergenic | 35.0% | |
CACTTCAGTCTATTGTAAAC+AGG | - | chr2_4:580629-580648 | None:intergenic | 35.0% | |
! | ATATTCATCTTATTTGGGGG+AGG | + | chr2_4:580655-580674 | Msa0307610:intron | 35.0% |
TTACCTACCAAGTGTGATAT+TGG | + | chr2_4:580886-580905 | Msa0307610:CDS | 35.0% | |
AAACCAATATCACACTTGGT+AGG | - | chr2_4:580892-580911 | None:intergenic | 35.0% | |
GAAAATAGCATCATCAATGG+TGG | - | chr2_4:580932-580951 | None:intergenic | 35.0% | |
!!! | GATGCTATTTTCAACAGTTG+AGG | + | chr2_4:580940-580959 | Msa0307610:CDS | 35.0% |
TCTGTGATTCGTGATTAACT+AGG | + | chr2_4:581316-581335 | Msa0307610:intron | 35.0% | |
!!! | TAGGTTTTTTCATGGTATGC+AGG | + | chr2_4:581335-581354 | Msa0307610:intron | 35.0% |
!!! | AGGTTTTTTCATGGTATGCA+GGG | + | chr2_4:581336-581355 | Msa0307610:intron | 35.0% |
CAAAATGTAAGTCGTGAAGA+AGG | - | chr2_4:581364-581383 | None:intergenic | 35.0% | |
! | ACGACTTACATTTTGTCATC+TGG | + | chr2_4:581369-581388 | Msa0307610:CDS | 35.0% |
! | CTTACATTTTGTCATCTGGT+TGG | + | chr2_4:581373-581392 | Msa0307610:CDS | 35.0% |
AATCCAAACAGTAATAGCCT+AGG | - | chr2_4:581522-581541 | None:intergenic | 35.0% | |
!! | AATAAGAAGGGAAGCATTAG+AGG | - | chr2_4:581573-581592 | None:intergenic | 35.0% |
TTCGGTAAACAAGATAAGCA+AGG | - | chr2_4:581608-581627 | None:intergenic | 35.0% | |
! | TTATCTTGTTTACCGAAACC+AGG | + | chr2_4:581611-581630 | Msa0307610:CDS | 35.0% |
AAACTCCCTAAGATAGCTTA+TGG | - | chr2_4:581942-581961 | None:intergenic | 35.0% | |
GATTAAGTTATTGGGGAGTA+AGG | + | chr2_4:582112-582131 | Msa0307610:intron | 35.0% | |
AGCATTCTCTGACAGAAAAT+AGG | + | chr2_4:582173-582192 | Msa0307610:intron | 35.0% | |
TGACAGAAAATAGGCTTAGA+TGG | + | chr2_4:582182-582201 | Msa0307610:CDS | 35.0% | |
GAAAATAGGCTTAGATGGTT+TGG | + | chr2_4:582187-582206 | Msa0307610:CDS | 35.0% | |
AAGAAGAGTAGATCAAATGG+AGG | + | chr2_4:582243-582262 | Msa0307610:CDS | 35.0% | |
! | GACCTCTAAGTCTTTTCTAA+TGG | - | chr2_4:582320-582339 | None:intergenic | 35.0% |
! | CAATGAGTTGGATCCAAATA+TGG | + | chr2_4:582339-582358 | Msa0307610:CDS | 35.0% |
! | GTTGTTGTTGTTGTTGTTGT+TGG | + | chr2_4:582429-582448 | Msa0307610:intron | 35.0% |
! | TTGTTGTTGTTGTTGTTGGT+GGG | + | chr2_4:582436-582455 | Msa0307610:intron | 35.0% |
CTCTCAATGAACCTTAGTAA+AGG | + | chr2_4:582551-582570 | Msa0307610:intron | 35.0% | |
GAAGAATGTGTCATGTATTC+TGG | - | chr2_4:582828-582847 | None:intergenic | 35.0% | |
AATAAATCCAGCTGAAACTG+TGG | - | chr2_4:583064-583083 | None:intergenic | 35.0% | |
AGAATGGTAACAATGAGCAA+GGG | - | chr2_4:583090-583109 | None:intergenic | 35.0% | |
AAGAATGGTAACAATGAGCA+AGG | - | chr2_4:583091-583110 | None:intergenic | 35.0% | |
!! | ACAGTACTGGTGAAAAAGAA+TGG | - | chr2_4:583106-583125 | None:intergenic | 35.0% |
!! | TTCTTTTTCACCAGTACTGT+AGG | + | chr2_4:583106-583125 | Msa0307610:CDS | 35.0% |
GCTGAATTGCTTCTAAATAC+TGG | - | chr2_4:583144-583163 | None:intergenic | 35.0% | |
ATTTAGAAGCAATTCAGCAC+AGG | + | chr2_4:583146-583165 | Msa0307610:CDS | 35.0% | |
AAGCTGTGGATGAAAAACTA+AGG | - | chr2_4:583194-583213 | None:intergenic | 35.0% | |
AGATGAACAATGTGGAAAGA+TGG | + | chr2_4:583261-583280 | Msa0307610:CDS | 35.0% | |
ACTTCAGAAGATATCGAGAA+AGG | + | chr2_4:583388-583407 | Msa0307610:CDS | 35.0% | |
! | TGGTTGAGGTTTCAATTTTC+TGG | + | chr2_4:583427-583446 | Msa0307610:intron | 35.0% |
! | GGTTGAGGTTTCAATTTTCT+GGG | + | chr2_4:583428-583447 | Msa0307610:intron | 35.0% |
TCTGGGCAATGTTTATAACT+TGG | + | chr2_4:583445-583464 | Msa0307610:intron | 35.0% | |
!! | AGTACCGATATATCCAAAGT+CGG | - | chr2_4:583545-583564 | None:intergenic | 35.0% |
ACTTTGGATATATCGGTACT+TGG | + | chr2_4:583545-583564 | Msa0307610:CDS | 35.0% | |
TACGCTTACACAATTGTGGT+TGG | + | chr2_4:573668-573687 | Msa0307610:five_prime_UTR | 40.0% | |
GAAAGAGAAAAATAAGCGGG+AGG | - | chr2_4:573726-573745 | None:intergenic | 40.0% | |
! | ATTCCGATTGAAGGTGTGTT+TGG | + | chr2_4:574527-574546 | Msa0307610:intron | 40.0% |
ACACCAAACACACCTTCAAT+CGG | - | chr2_4:574533-574552 | None:intergenic | 40.0% | |
GACACTATTGTGTAAGTGTC+GGG | - | chr2_4:574572-574591 | None:intergenic | 40.0% | |
GGACACTATTGTGTAAGTGT+CGG | - | chr2_4:574573-574592 | None:intergenic | 40.0% | |
GCATGACTTAACAAAGGAAG+AGG | - | chr2_4:574815-574834 | None:intergenic | 40.0% | |
TGTAAATCCCTGTATGGAGT+TGG | + | chr2_4:574841-574860 | Msa0307610:intron | 40.0% | |
TCCTATAAGAAACACACACG+TGG | + | chr2_4:574875-574894 | Msa0307610:intron | 40.0% | |
TCCACGTGTGTGTTTCTTAT+AGG | - | chr2_4:574879-574898 | None:intergenic | 40.0% | |
CCATAACCCAATGCAAGTTA+TGG | - | chr2_4:575204-575223 | None:intergenic | 40.0% | |
! | CCATAACTTGCATTGGGTTA+TGG | + | chr2_4:575201-575220 | Msa0307610:intron | 40.0% |
! | TTCAGGTGATGGTCATGATT+TGG | + | chr2_4:575307-575326 | Msa0307610:intron | 40.0% |
GTTTCATAGTATAGGGAGCA+AGG | + | chr2_4:575370-575389 | Msa0307610:five_prime_UTR | 40.0% | |
!!! | GTTGCTCTTTTAACTTCTGC+TGG | + | chr2_4:575402-575421 | Msa0307610:CDS | 40.0% |
TTAATGTGTACTTTGCACGG+AGG | + | chr2_4:575493-575512 | Msa0307610:CDS | 40.0% | |
TTGTAAGGATAGTCGTGTTC+AGG | + | chr2_4:575649-575668 | Msa0307610:CDS | 40.0% | |
!! | TTTTGAGTGGTTGTGCCAAA+GGG | + | chr2_4:576083-576102 | Msa0307610:intron | 40.0% |
TGCTTTGATCTCATGATCTG+TGG | + | chr2_4:576226-576245 | Msa0307610:intron | 40.0% | |
! | TCAACCTTTGTTACTTGCCT+TGG | + | chr2_4:576521-576540 | Msa0307610:intron | 40.0% |
!!! | TGCCTTGGTTTTACTGTGTT+TGG | + | chr2_4:576536-576555 | Msa0307610:intron | 40.0% |
AATACATCCAGTGACTCCAA+AGG | - | chr2_4:576778-576797 | None:intergenic | 40.0% | |
ACCATTGAGAATGTCGAAGA+AGG | + | chr2_4:576799-576818 | Msa0307610:CDS | 40.0% | |
ACCTTCTTCGACATTCTCAA+TGG | - | chr2_4:576803-576822 | None:intergenic | 40.0% | |
! | CCTTTTTATGCTGAAGCTAC+AGG | - | chr2_4:576907-576926 | None:intergenic | 40.0% |
CCTGTAGCTTCAGCATAAAA+AGG | + | chr2_4:576904-576923 | Msa0307610:intron | 40.0% | |
! | GAATTCAGCTTTGTGAGATG+TGG | - | chr2_4:576996-577015 | None:intergenic | 40.0% |
ATATGTTGGAGGGAATCATG+GGG | - | chr2_4:577065-577084 | None:intergenic | 40.0% | |
GATATGTTGGAGGGAATCAT+GGG | - | chr2_4:577066-577085 | None:intergenic | 40.0% | |
TACAAGGTGGATATGTTGGA+GGG | - | chr2_4:577075-577094 | None:intergenic | 40.0% | |
TTACAAGGTGGATATGTTGG+AGG | - | chr2_4:577076-577095 | None:intergenic | 40.0% | |
TGTGTGGCAAATTACTCAGT+TGG | + | chr2_4:577130-577149 | Msa0307610:intron | 40.0% | |
ATACTACTGGATCCAAGTGA+GGG | - | chr2_4:577181-577200 | None:intergenic | 40.0% | |
TCTCAGCTTGTACATACTAC+TGG | - | chr2_4:577194-577213 | None:intergenic | 40.0% | |
AAGCTTACTCGAAGCTTCAT+AGG | + | chr2_4:577230-577249 | Msa0307610:intron | 40.0% | |
GGTTCTGCTATGTCCTTTAA+TGG | + | chr2_4:577283-577302 | Msa0307610:intron | 40.0% | |
AAACAAAAGGCGGCCATTAA+AGG | - | chr2_4:577299-577318 | None:intergenic | 40.0% | |
!!! | CATATTTGGCTTTTCCTTCG+TGG | + | chr2_4:577322-577341 | Msa0307610:intron | 40.0% |
! | GTAATTTTACTCAGCCACGA+AGG | - | chr2_4:577339-577358 | None:intergenic | 40.0% |
GCACTCTCCTTTACTTTGTA+AGG | + | chr2_4:577618-577637 | Msa0307610:intron | 40.0% | |
GTATGATTCGCTTATAGACC+AGG | - | chr2_4:577835-577854 | None:intergenic | 40.0% | |
TGGCAAAGTTCAGAAACTGA+AGG | + | chr2_4:577929-577948 | Msa0307610:CDS | 40.0% | |
CATAATCAAAGCCCAAAACC+AGG | - | chr2_4:578424-578443 | None:intergenic | 40.0% | |
TAAATCTTCTTTCCCCAGGA+CGG | + | chr2_4:578574-578593 | Msa0307610:intron | 40.0% | |
GAATTTCCCAAACAGCAACA+TGG | - | chr2_4:578664-578683 | None:intergenic | 40.0% | |
GCTACACTGACATAGATACA+AGG | + | chr2_4:578740-578759 | Msa0307610:CDS | 40.0% | |
!!! | GGCATTCTTTTGGGTTTGTT+GGG | + | chr2_4:579034-579053 | Msa0307610:intron | 40.0% |
TAAGCAAAGCATGAGCCATT+AGG | - | chr2_4:579085-579104 | None:intergenic | 40.0% | |
CACTGAGCTTACATTCTTGT+TGG | + | chr2_4:579210-579229 | Msa0307610:intron | 40.0% | |
GTAACGACTCAATGACAACA+AGG | - | chr2_4:579623-579642 | None:intergenic | 40.0% | |
CAAGTTTGGATCTCTAATGC+AGG | + | chr2_4:579703-579722 | Msa0307610:intron | 40.0% | |
CCTATATGGTACACGAATGT+TGG | - | chr2_4:579858-579877 | None:intergenic | 40.0% | |
CCAACATTCGTGTACCATAT+AGG | + | chr2_4:579855-579874 | Msa0307610:CDS | 40.0% | |
CGGATCCAAATTTGCCTATA+TGG | - | chr2_4:579872-579891 | None:intergenic | 40.0% | |
GCAAATTTGGATCCGTAAGA+TGG | + | chr2_4:579877-579896 | Msa0307610:CDS | 40.0% | |
GAAAAGGAACACAAGCATGA+AGG | - | chr2_4:579924-579943 | None:intergenic | 40.0% | |
!! | AATGTTTCCTTTTCTGGCAG+GGG | + | chr2_4:579991-580010 | Msa0307610:CDS | 40.0% |
!! | GCAGGGGTACTTAAAAAGTA+AGG | + | chr2_4:580007-580026 | Msa0307610:intron | 40.0% |
TCTATTAGGAACGAACATCG+TGG | + | chr2_4:580040-580059 | Msa0307610:intron | 40.0% | |
GTCTTCTCCCATTTGAATGA+TGG | + | chr2_4:580572-580591 | Msa0307610:intron | 40.0% | |
! | TCTTTTGCAGCCAATATGTG+AGG | + | chr2_4:580849-580868 | Msa0307610:intron | 40.0% |
! | GAAGGAAGAAAAGTGCATGT+TGG | + | chr2_4:580981-581000 | Msa0307610:CDS | 40.0% |
TATTCCAGAGATTCCTACTC+AGG | + | chr2_4:581445-581464 | Msa0307610:CDS | 40.0% | |
ATTCCAGAGATTCCTACTCA+GGG | + | chr2_4:581446-581465 | Msa0307610:CDS | 40.0% | |
TATCATCCTTAACCCTGAGT+AGG | - | chr2_4:581461-581480 | None:intergenic | 40.0% | |
CTAGGAACTTCTGTATGGTA+TGG | - | chr2_4:581504-581523 | None:intergenic | 40.0% | |
CATACCATACAGAAGTTCCT+AGG | + | chr2_4:581502-581521 | Msa0307610:CDS | 40.0% | |
ATAGCCTAGGAACTTCTGTA+TGG | - | chr2_4:581509-581528 | None:intergenic | 40.0% | |
GTTCCTAGGCTATTACTGTT+TGG | + | chr2_4:581516-581535 | Msa0307610:CDS | 40.0% | |
AGAGAATCTCCAAGCAAAAC+CGG | - | chr2_4:581716-581735 | None:intergenic | 40.0% | |
AGATGAAGACGATGCTAATG+CGG | + | chr2_4:581972-581991 | Msa0307610:intron | 40.0% | |
! | TTAGATATTAAGGGGGTGCA+TGG | - | chr2_4:582016-582035 | None:intergenic | 40.0% |
TCTTCTTACAACGGCATCTA+CGG | - | chr2_4:582230-582249 | None:intergenic | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | + | chr2_4:582268-582287 | Msa0307610:CDS | 40.0% | |
AGACTTAGAGGTCAATGAGT+TGG | + | chr2_4:582327-582346 | Msa0307610:CDS | 40.0% | |
! | GTTGTTGTTGTTGTTGTTGG+TGG | + | chr2_4:582435-582454 | Msa0307610:intron | 40.0% |
! | TGTTGTTGTTGTTGTTGGTG+GGG | + | chr2_4:582437-582456 | Msa0307610:intron | 40.0% |
GGTGAAACTGGTATAATGCA+TGG | + | chr2_4:582528-582547 | Msa0307610:intron | 40.0% | |
GAAATCGTTTCCTACAGTAC+TGG | - | chr2_4:583119-583138 | None:intergenic | 40.0% | |
GTCATTAAACAGACTAGACC+AGG | + | chr2_4:583497-583516 | Msa0307610:CDS | 40.0% | |
GAGTCCGACTTTGGATATAT+CGG | + | chr2_4:583538-583557 | Msa0307610:CDS | 40.0% | |
TTGGATATATCGGTACTTGG+TGG | + | chr2_4:583548-583567 | Msa0307610:CDS | 40.0% | |
TAGATGTTCATGCACTGGAT+CGG | - | chr2_4:583627-583646 | None:intergenic | 40.0% | |
ATAGCTGAAGTGGCTATTGA+GGG | + | chr2_4:583827-583846 | Msa0307610:three_prime_UTR | 40.0% | |
CGGTTACGCTTACACAATTG+TGG | + | chr2_4:573664-573683 | Msa0307610:five_prime_UTR | 45.0% | |
AGAAAAATAAGCGGGAGGGA+TGG | - | chr2_4:573721-573740 | None:intergenic | 45.0% | |
TCATGATTGGTACGCGATTG+TGG | - | chr2_4:573807-573826 | None:intergenic | 45.0% | |
AGAATTCTTCATCCGTGCAC+TGG | + | chr2_4:574244-574263 | Msa0307610:five_prime_UTR | 45.0% | |
CTATGTCAACGTGTGTCTAG+AGG | + | chr2_4:574638-574657 | Msa0307610:intron | 45.0% | |
CATAGTATAGGGAGCAAGGA+TGG | + | chr2_4:575374-575393 | Msa0307610:exon | 45.0% | |
!! | TAGACACGTTGATTTCTGGC+TGG | + | chr2_4:575533-575552 | Msa0307610:CDS | 45.0% |
! | GATATTGGCTATTGGTGGCT+TGG | + | chr2_4:575614-575633 | Msa0307610:CDS | 45.0% |
CGCTCCTAAGAATTCATGTC+AGG | + | chr2_4:575900-575919 | Msa0307610:intron | 45.0% | |
!! | CTTTTGAGTGGTTGTGCCAA+AGG | + | chr2_4:576082-576101 | Msa0307610:intron | 45.0% |
CGATTGTTCATCTTGAGGCT+AGG | + | chr2_4:576629-576648 | Msa0307610:intron | 45.0% | |
!! | GCATATACCTTTGGAGTCAC+TGG | + | chr2_4:576768-576787 | Msa0307610:CDS | 45.0% |
ACAAAGCTGAATTCCCAAGC+CGG | + | chr2_4:577002-577021 | Msa0307610:intron | 45.0% | |
GGATATGTTGGAGGGAATCA+TGG | - | chr2_4:577067-577086 | None:intergenic | 45.0% | |
TACTCAGTTGGTCAAGACGT+TGG | + | chr2_4:577142-577161 | Msa0307610:intron | 45.0% | |
TACTACTGGATCCAAGTGAG+GGG | - | chr2_4:577180-577199 | None:intergenic | 45.0% | |
CATACTACTGGATCCAAGTG+AGG | - | chr2_4:577182-577201 | None:intergenic | 45.0% | |
TTACTCGAAGCTTCATAGGC+AGG | + | chr2_4:577234-577253 | Msa0307610:intron | 45.0% | |
TTCTTGTCCGATCAATTCCC+TGG | + | chr2_4:577814-577833 | Msa0307610:CDS | 45.0% | |
ATCTTTACAGTTGCACGTGG+AGG | - | chr2_4:578217-578236 | None:intergenic | 45.0% | |
AAATCTTCTTTCCCCAGGAC+GGG | + | chr2_4:578575-578594 | Msa0307610:intron | 45.0% | |
TCGGAAAATAGTTGCAAGCC+AGG | + | chr2_4:578631-578650 | Msa0307610:CDS | 45.0% | |
! | TGTTGTGCCATGTTGCTGTT+TGG | + | chr2_4:578654-578673 | Msa0307610:CDS | 45.0% |
!! | GTTGTGCCATGTTGCTGTTT+GGG | + | chr2_4:578655-578674 | Msa0307610:CDS | 45.0% |
!!! | CGGCATTCTTTTGGGTTTGT+TGG | + | chr2_4:579033-579052 | Msa0307610:intron | 45.0% |
AAGCATGAGCCATTAGGTAC+AGG | - | chr2_4:579079-579098 | None:intergenic | 45.0% | |
GCTCTTCATTGCCCAATGTT+CGG | + | chr2_4:579232-579251 | Msa0307610:intron | 45.0% | |
TCAAGTGAGGACCGAACATT+GGG | - | chr2_4:579246-579265 | None:intergenic | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2_4:579457-579476 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2_4:579458-579477 | None:intergenic | 45.0% |
AAGTCGGTATGCTGCTCTTA+TGG | + | chr2_4:579754-579773 | Msa0307610:CDS | 45.0% | |
ATGTCTGTCGCCCATAACAT+AGG | - | chr2_4:579806-579825 | None:intergenic | 45.0% | |
TATGTTATGGGCGACAGACA+TGG | + | chr2_4:579805-579824 | Msa0307610:CDS | 45.0% | |
! | CATGCTTGTGTTCCTTTTCC+CGG | + | chr2_4:579925-579944 | Msa0307610:CDS | 45.0% |
! | TTGTGTTCCTTTTCCCGGTT+GGG | + | chr2_4:579930-579949 | Msa0307610:CDS | 45.0% |
TTAAGTACCCCTGCCAGAAA+AGG | - | chr2_4:580001-580020 | None:intergenic | 45.0% | |
ACAACTGACAAGCAGAAGAG+AGG | - | chr2_4:580296-580315 | None:intergenic | 45.0% | |
TTTGCAGCCAATATGTGAGG+CGG | + | chr2_4:580852-580871 | Msa0307610:intron | 45.0% | |
! | ACTTTTCTTCCTTCCACTGC+GGG | - | chr2_4:580975-580994 | None:intergenic | 45.0% |
! | CACTTTTCTTCCTTCCACTG+CGG | - | chr2_4:580976-580995 | None:intergenic | 45.0% |
TCTAGATAAACCACCTGAGC+TGG | - | chr2_4:581130-581149 | None:intergenic | 45.0% | |
TAACCCTGAGTAGGAATCTC+TGG | - | chr2_4:581452-581471 | None:intergenic | 45.0% | |
GAGATTCCTACTCAGGGTTA+AGG | + | chr2_4:581452-581471 | Msa0307610:CDS | 45.0% | |
TGGGTTCACCTGTTCTATTC+TGG | + | chr2_4:581545-581564 | Msa0307610:CDS | 45.0% | |
!! | TAGAGGTGCCAGAATAGAAC+AGG | - | chr2_4:581556-581575 | None:intergenic | 45.0% |
CATTATGCTCAAACACTCCC+CGG | + | chr2_4:581694-581713 | Msa0307610:intron | 45.0% | |
AGAATCTCCAAGCAAAACCG+GGG | - | chr2_4:581714-581733 | None:intergenic | 45.0% | |
GAGAATCTCCAAGCAAAACC+GGG | - | chr2_4:581715-581734 | None:intergenic | 45.0% | |
AGTTATTGGGGAGTAAGGTG+TGG | + | chr2_4:582117-582136 | Msa0307610:intron | 45.0% | |
CTTCTTACAACGGCATCTAC+GGG | - | chr2_4:582229-582248 | None:intergenic | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | + | chr2_4:582252-582271 | Msa0307610:CDS | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | + | chr2_4:582262-582281 | Msa0307610:CDS | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2_4:579457-579476 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2_4:579458-579477 | None:intergenic | 45.0% |
!! | ACGATAGTGGGGGACAATAT+TGG | + | chr2_4:582959-582978 | Msa0307610:CDS | 45.0% |
TTTGCTCAACTTATCGCGCT+TGG | + | chr2_4:583018-583037 | Msa0307610:CDS | 45.0% | |
TTGCTCAACTTATCGCGCTT+GGG | + | chr2_4:583019-583038 | Msa0307610:CDS | 45.0% | |
AACTAAGGAGCAGCGAGAAA+GGG | - | chr2_4:583179-583198 | None:intergenic | 45.0% | |
AAACTAAGGAGCAGCGAGAA+AGG | - | chr2_4:583180-583199 | None:intergenic | 45.0% | |
GATAGCTGAAGTGGCTATTG+AGG | + | chr2_4:583826-583845 | Msa0307610:three_prime_UTR | 45.0% | |
GTGTACACAAACGCACGTTC+TGG | + | chr2_4:574086-574105 | Msa0307610:five_prime_UTR | 50.0% | |
! | TAGGGCACCAACTCCATACA+GGG | - | chr2_4:574851-574870 | None:intergenic | 50.0% |
! | ATAGGGCACCAACTCCATAC+AGG | - | chr2_4:574852-574871 | None:intergenic | 50.0% |
TATCATCCAGAGGTGACCCT+TGG | - | chr2_4:574914-574933 | None:intergenic | 50.0% | |
! | GATTTGTTCCCTCTCCTAGC+TGG | + | chr2_4:575559-575578 | Msa0307610:CDS | 50.0% |
AGTGCAGATGACACCAGTGA+TGG | - | chr2_4:576701-576720 | None:intergenic | 50.0% | |
AGTTATTCAGCCTCCGGCTT+GGG | - | chr2_4:577018-577037 | None:intergenic | 50.0% | |
GAGGGAATCATGGGGAATGA+AGG | - | chr2_4:577057-577076 | None:intergenic | 50.0% | |
!! | GAGACAGATAGGTTGATGCG+TGG | - | chr2_4:577890-577909 | None:intergenic | 50.0% |
ACTCTTGAGAGGGAGCTTTG+CGG | - | chr2_4:578271-578290 | None:intergenic | 50.0% | |
AAAGCCCAAAACCAGGGAGA+GGG | - | chr2_4:578417-578436 | None:intergenic | 50.0% | |
AATCTTCTTTCCCCAGGACG+GGG | + | chr2_4:578576-578595 | Msa0307610:intron | 50.0% | |
! | TCGATGGAGCGGCATTCTTT+TGG | + | chr2_4:579024-579043 | Msa0307610:intron | 50.0% |
! | CGATGGAGCGGCATTCTTTT+GGG | + | chr2_4:579025-579044 | Msa0307610:intron | 50.0% |
GTCAAGTGAGGACCGAACAT+TGG | - | chr2_4:579247-579266 | None:intergenic | 50.0% | |
ATGTTCGGTCCTCACTTGAC+AGG | + | chr2_4:579247-579266 | Msa0307610:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr2_4:579453-579472 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr2_4:579459-579478 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr2_4:579456-579475 | Msa0307610:intron | 50.0% | |
CAGTGAACATCGTGTGGTTC+AGG | - | chr2_4:579833-579852 | None:intergenic | 50.0% | |
CTGAACCACACGATGTTCAC+TGG | + | chr2_4:579831-579850 | Msa0307610:CDS | 50.0% | |
TTGGACCAGTGAACATCGTG+TGG | - | chr2_4:579839-579858 | None:intergenic | 50.0% | |
! | CTTGTGTTCCTTTTCCCGGT+TGG | + | chr2_4:579929-579948 | Msa0307610:CDS | 50.0% |
! | AAGCCTTGTACCAACCCAAC+CGG | - | chr2_4:579947-579966 | None:intergenic | 50.0% |
GGAACGAACATCGTGGACTT+TGG | + | chr2_4:580047-580066 | Msa0307610:intron | 50.0% | |
!! | AACAGGTTTGGTGGGGAGTA+GGG | - | chr2_4:580612-580631 | None:intergenic | 50.0% |
!! | AAACAGGTTTGGTGGGGAGT+AGG | - | chr2_4:580613-580632 | None:intergenic | 50.0% |
TTGCAGCCAATATGTGAGGC+GGG | + | chr2_4:580853-580872 | Msa0307610:intron | 50.0% | |
TTCCTTCCACTGCGGGAAAT+AGG | - | chr2_4:580968-580987 | None:intergenic | 50.0% | |
! | ACTGCCTTTGCAAGTGTTGC+AGG | - | chr2_4:581106-581125 | None:intergenic | 50.0% |
TCATCTGGTTGGGCAAGTCT+GGG | + | chr2_4:581384-581403 | Msa0307610:CDS | 50.0% | |
!! | CGGGGAGTGTTTGAGCATAA+TGG | - | chr2_4:581696-581715 | None:intergenic | 50.0% |
! | AAACACTCCCCGGTTTTGCT+TGG | + | chr2_4:581704-581723 | Msa0307610:intron | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | - | chr2_4:579453-579472 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr2_4:579459-579478 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr2_4:579456-579475 | Msa0307610:intron | 50.0% | |
GCCTATTGCACACAACGCAA+CGG | + | chr2_4:582981-583000 | Msa0307610:CDS | 50.0% | |
ACCGTTGCGTTGTGTGCAAT+AGG | - | chr2_4:582985-583004 | None:intergenic | 50.0% | |
TGCTCAACTTATCGCGCTTG+GGG | + | chr2_4:583020-583039 | Msa0307610:CDS | 50.0% | |
! | CTTATCGCGCTTGGGGTTTT+TGG | + | chr2_4:583027-583046 | Msa0307610:CDS | 50.0% |
AAACGCTCCACAGTTTCAGC+TGG | + | chr2_4:583054-583073 | Msa0307610:CDS | 50.0% | |
! | ATGCGGCATGGGTTGTTTGT+AGG | - | chr2_4:583314-583333 | None:intergenic | 50.0% |
! | TGGAGCATTCAGATGGGCTT+GGG | - | chr2_4:583339-583358 | None:intergenic | 50.0% |
GTAAGCGTAACCGCCCTAAC+TGG | - | chr2_4:573657-573676 | None:intergenic | 55.0% | |
CTTCCACGTGGCAAACAGCA+AGG | - | chr2_4:573696-573715 | None:intergenic | 55.0% | |
TGGACGCACTCACACACCAA+GGG | + | chr2_4:574895-574914 | Msa0307610:intron | 55.0% | |
CGTCAAGTGCATCCAGAGAG+TGG | - | chr2_4:575882-575901 | None:intergenic | 55.0% | |
AAGCTGAATTCCCAAGCCGG+AGG | + | chr2_4:577005-577024 | Msa0307610:intron | 55.0% | |
GAGTTATTCAGCCTCCGGCT+TGG | - | chr2_4:577019-577038 | None:intergenic | 55.0% | |
TGGATCCAAGTGAGGGGATG+GGG | - | chr2_4:577174-577193 | None:intergenic | 55.0% | |
CTGGATCCAAGTGAGGGGAT+GGG | - | chr2_4:577175-577194 | None:intergenic | 55.0% | |
ACTGGATCCAAGTGAGGGGA+TGG | - | chr2_4:577176-577195 | None:intergenic | 55.0% | |
TAGGTCGGGTATGACCACAG+TGG | + | chr2_4:578245-578264 | Msa0307610:intron | 55.0% | |
AAGCCCAAAACCAGGGAGAG+GGG | - | chr2_4:578416-578435 | None:intergenic | 55.0% | |
CAAAGCCCAAAACCAGGGAG+AGG | - | chr2_4:578418-578437 | None:intergenic | 55.0% | |
ATATGTTCAGCCCCGTCCTG+GGG | - | chr2_4:578589-578608 | None:intergenic | 55.0% | |
CATATGTTCAGCCCCGTCCT+GGG | - | chr2_4:578590-578609 | None:intergenic | 55.0% | |
ACATATGTTCAGCCCCGTCC+TGG | - | chr2_4:578591-578610 | None:intergenic | 55.0% | |
CGGGGCTGAACATATGTGCA+AGG | + | chr2_4:578594-578613 | Msa0307610:CDS | 55.0% | |
CAGCAACATGGCACAACACC+TGG | - | chr2_4:578652-578671 | None:intergenic | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr2_4:579445-579464 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr2_4:579444-579463 | Msa0307610:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr2_4:579445-579464 | Msa0307610:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr2_4:579451-579470 | Msa0307610:intron | 55.0% | |
! | GTTCCTTTTCCCGGTTGGGT+TGG | + | chr2_4:579934-579953 | Msa0307610:CDS | 55.0% |
GTACCAACCCAACCGGGAAA+AGG | - | chr2_4:579940-579959 | None:intergenic | 55.0% | |
!! | TTCCCGGTTGGGTTGGTACA+AGG | + | chr2_4:579941-579960 | Msa0307610:CDS | 55.0% |
! | AGCCTTGTACCAACCCAACC+GGG | - | chr2_4:579946-579965 | None:intergenic | 55.0% |
ACTAGTGAGCTAGCACCCCA+TGG | - | chr2_4:580384-580403 | None:intergenic | 55.0% | |
TCACCACCCGCCTCACATAT+TGG | - | chr2_4:580862-580881 | None:intergenic | 55.0% | |
GTCCTATTTCCCGCAGTGGA+AGG | + | chr2_4:580963-580982 | Msa0307610:CDS | 55.0% | |
! | CCTTTGCAAGTGTTGCAGGC+AGG | - | chr2_4:581102-581121 | None:intergenic | 55.0% |
CCTGCCTGCAACACTTGCAA+AGG | + | chr2_4:581099-581118 | Msa0307610:CDS | 55.0% | |
GTCATCTGGTTGGGCAAGTC+TGG | + | chr2_4:581383-581402 | Msa0307610:CDS | 55.0% | |
TTGGGGAGTAAGGTGTGGCA+AGG | + | chr2_4:582122-582141 | Msa0307610:intron | 55.0% | |
TGGGGAGTAAGGTGTGGCAA+GGG | + | chr2_4:582123-582142 | Msa0307610:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr2_4:579445-579464 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr2_4:579444-579463 | Msa0307610:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr2_4:579445-579464 | Msa0307610:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr2_4:579451-579470 | Msa0307610:intron | 55.0% | |
! | GGAGCATTCAGATGGGCTTG+GGG | - | chr2_4:583338-583357 | None:intergenic | 55.0% |
! | CTGGAGCATTCAGATGGGCT+TGG | - | chr2_4:583340-583359 | None:intergenic | 55.0% |
!! | GTGGGCTGGAGCATTCAGAT+GGG | - | chr2_4:583345-583364 | None:intergenic | 55.0% |
CAATCCCCTTGTCCTCTGGT+GGG | - | chr2_4:583363-583382 | None:intergenic | 55.0% | |
CAGAGGACAAGGGGATTGCT+GGG | + | chr2_4:583365-583384 | Msa0307610:CDS | 55.0% | |
AGTGTGCGATGGATAGGTCC+TGG | - | chr2_4:583518-583537 | None:intergenic | 55.0% | |
GGACTCAGTGTGCGATGGAT+AGG | - | chr2_4:583524-583543 | None:intergenic | 55.0% | |
AAGTCGGACTCAGTGTGCGA+TGG | - | chr2_4:583529-583548 | None:intergenic | 55.0% | |
TCGCACACTGAGTCCGACTT+TGG | + | chr2_4:583529-583548 | Msa0307610:CDS | 55.0% | |
TGCACTGGATCGGTCACATC+AGG | - | chr2_4:583617-583636 | None:intergenic | 55.0% | |
CATCTCGTGGCCAGTTAGGG+CGG | + | chr2_4:573644-573663 | Msa0307610:five_prime_UTR | 60.0% | |
GGAGGGATGGATCTTCCACG+TGG | - | chr2_4:573708-573727 | None:intergenic | 60.0% | |
GTGGACGCACTCACACACCA+AGG | + | chr2_4:574894-574913 | Msa0307610:intron | 60.0% | |
CACACACCAAGGGTCACCTC+TGG | + | chr2_4:574905-574924 | Msa0307610:intron | 60.0% | |
CAAGTGAGGGGATGGGGAGT+GGG | - | chr2_4:577168-577187 | None:intergenic | 60.0% | |
! | TCACCCCCTCTCCCTGGTTT+TGG | + | chr2_4:578409-578428 | Msa0307610:intron | 60.0% |
!! | CACCCCCTCTCCCTGGTTTT+GGG | + | chr2_4:578410-578429 | Msa0307610:intron | 60.0% |
AGCCCAAAACCAGGGAGAGG+GGG | - | chr2_4:578415-578434 | None:intergenic | 60.0% | |
CAGCCAATATGTGAGGCGGG+TGG | + | chr2_4:580856-580875 | Msa0307610:intron | 60.0% | |
TATGTGAGGCGGGTGGTGAC+TGG | + | chr2_4:580863-580882 | Msa0307610:CDS | 60.0% | |
GAGGGTCCTATTTCCCGCAG+TGG | + | chr2_4:580959-580978 | Msa0307610:CDS | 60.0% | |
TGCAAAGGCAGTGCCAGCTC+AGG | + | chr2_4:581114-581133 | Msa0307610:CDS | 60.0% | |
AAAGGCAGTGCCAGCTCAGG+TGG | + | chr2_4:581117-581136 | Msa0307610:intron | 60.0% | |
! | GTTGTTGGTGGGGTGCAGCA+TGG | + | chr2_4:582447-582466 | Msa0307610:intron | 60.0% |
! | TCAGATGGGCTTGGGGCATG+CGG | - | chr2_4:583331-583350 | None:intergenic | 60.0% |
!! | GGTGGGCTGGAGCATTCAGA+TGG | - | chr2_4:583346-583365 | None:intergenic | 60.0% |
TGAATGCTCCAGCCCACCAG+AGG | + | chr2_4:583348-583367 | Msa0307610:CDS | 60.0% | |
TCCAGCCCACCAGAGGACAA+GGG | + | chr2_4:583355-583374 | Msa0307610:CDS | 60.0% | |
GCAATCCCCTTGTCCTCTGG+TGG | - | chr2_4:583364-583383 | None:intergenic | 60.0% | |
CCAGCAATCCCCTTGTCCTC+TGG | - | chr2_4:583367-583386 | None:intergenic | 60.0% | |
CCAGAGGACAAGGGGATTGC+TGG | + | chr2_4:583364-583383 | Msa0307610:CDS | 60.0% | |
!! | GCGCCTTGCTGTTTGCCACG+TGG | + | chr2_4:573690-573709 | Msa0307610:five_prime_UTR | 65.0% |
CCAAGTGAGGGGATGGGGAG+TGG | - | chr2_4:577169-577188 | None:intergenic | 65.0% | |
CCACTCCCCATCCCCTCACT+TGG | + | chr2_4:577166-577185 | Msa0307610:intron | 65.0% | |
AGGGAGCTTTGCGGCCACTG+TGG | - | chr2_4:578262-578281 | None:intergenic | 65.0% | |
AGCATCTCACCCCCTCTCCC+TGG | + | chr2_4:578403-578422 | Msa0307610:intron | 65.0% | |
CTCCAGCCCACCAGAGGACA+AGG | + | chr2_4:583354-583373 | Msa0307610:CDS | 65.0% | |
CCAGCCCACCAGAGGACAAG+GGG | + | chr2_4:583356-583375 | Msa0307610:CDS | 65.0% | |
GGGCTTGGGGCATGCGGCAT+GGG | - | chr2_4:583325-583344 | None:intergenic | 70.0% | |
TGGGCTTGGGGCATGCGGCA+TGG | - | chr2_4:583326-583345 | None:intergenic | 70.0% | |
! | CCCCTTGTCCTCTGGTGGGC+TGG | - | chr2_4:583359-583378 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 573644 | 583859 | 573644 | ID=Msa0307610;Name=Msa0307610 |
chr2_4 | mRNA | 573644 | 583859 | 573644 | ID=Msa0307610-mRNA-1;Parent=Msa0307610;Name=Msa0307610-mRNA-1;_AED=0.14;_eAED=0.14;_QI=703|0.69|0.85|0.92|1|0.92|14|195|843 |
chr2_4 | exon | 573644 | 574265 | 573644 | ID=Msa0307610-mRNA-1:exon:251;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 575312 | 575670 | 575312 | ID=Msa0307610-mRNA-1:exon:252;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 576684 | 576830 | 576684 | ID=Msa0307610-mRNA-1:exon:253;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 577571 | 577634 | 577571 | ID=Msa0307610-mRNA-1:exon:254;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 577741 | 577950 | 577741 | ID=Msa0307610-mRNA-1:exon:255;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 578592 | 578768 | 578592 | ID=Msa0307610-mRNA-1:exon:256;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 579609 | 579647 | 579609 | ID=Msa0307610-mRNA-1:exon:257;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 579725 | 580023 | 579725 | ID=Msa0307610-mRNA-1:exon:258;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 580859 | 581135 | 580859 | ID=Msa0307610-mRNA-1:exon:259;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 581357 | 581632 | 581357 | ID=Msa0307610-mRNA-1:exon:260;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 582175 | 582360 | 582175 | ID=Msa0307610-mRNA-1:exon:261;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 582934 | 583167 | 582934 | ID=Msa0307610-mRNA-1:exon:262;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 583238 | 583409 | 583238 | ID=Msa0307610-mRNA-1:exon:263;Parent=Msa0307610-mRNA-1 |
chr2_4 | exon | 583492 | 583859 | 583492 | ID=Msa0307610-mRNA-1:exon:264;Parent=Msa0307610-mRNA-1 |
chr2_4 | five_prime_UTR | 573644 | 574265 | 573644 | ID=Msa0307610-mRNA-1:five_prime_utr;Parent=Msa0307610-mRNA-1 |
chr2_4 | five_prime_UTR | 575312 | 575392 | 575312 | ID=Msa0307610-mRNA-1:five_prime_utr;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 575393 | 575670 | 575393 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 576684 | 576830 | 576684 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 577571 | 577634 | 577571 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 577741 | 577950 | 577741 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 578592 | 578768 | 578592 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 579609 | 579647 | 579609 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 579725 | 580023 | 579725 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 580859 | 581135 | 580859 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 581357 | 581632 | 581357 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 582175 | 582360 | 582175 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 582934 | 583167 | 582934 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 583238 | 583409 | 583238 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | CDS | 583492 | 583664 | 583492 | ID=Msa0307610-mRNA-1:cds;Parent=Msa0307610-mRNA-1 |
chr2_4 | three_prime_UTR | 583665 | 583859 | 583665 | ID=Msa0307610-mRNA-1:three_prime_utr;Parent=Msa0307610-mRNA-1 |
Gene Sequence |
Protein sequence |