Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0310060 | AFK45389.1 | 92.508 | 307 | 12 | 1 | 17 | 312 | 17 | 323 | 0.0 | 583 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0310060 | sp|Q9SZH2|PER43_ARATH | 62.579 | 318 | 104 | 3 | 7 | 312 | 12 | 326 | 2.81e-138 | 397 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0310060 | I3SYP7 | 92.508 | 307 | 12 | 1 | 17 | 312 | 17 | 323 | 0.0 | 583 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0189680 | Msa0310060 | 0.892026 | 2.317955e-74 | -8.615850e-47 |
Msa0231990 | Msa0310060 | 0.888180 | 7.419271e-73 | -8.615850e-47 |
Msa0232060 | Msa0310060 | 0.888014 | 8.595102e-73 | -8.615850e-47 |
Msa0310060 | Msa0881280 | 0.869091 | 4.013214e-66 | -8.615850e-47 |
Msa0310060 | Msa1343280 | 0.891349 | 4.309660e-74 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0310060 | MtrunA17_Chr2g0278671 | 92.834 | 307 | 11 | 1 | 17 | 312 | 17 | 323 | 0.0 | 582 |
Msa0310060 | MtrunA17_Chr4g0063671 | 48.276 | 319 | 148 | 5 | 6 | 312 | 7 | 320 | 6.20e-95 | 283 |
Msa0310060 | MtrunA17_Chr2g0279041 | 47.975 | 321 | 150 | 6 | 5 | 312 | 9 | 325 | 6.27e-94 | 281 |
Msa0310060 | MtrunA17_Chr4g0070951 | 39.634 | 328 | 171 | 7 | 3 | 312 | 11 | 329 | 4.12e-71 | 223 |
Msa0310060 | MtrunA17_Chr2g0279061 | 46.693 | 257 | 123 | 4 | 68 | 312 | 12 | 266 | 9.61e-71 | 220 |
Msa0310060 | MtrunA17_Chr5g0402571 | 39.571 | 326 | 171 | 8 | 4 | 312 | 10 | 326 | 1.48e-70 | 221 |
Msa0310060 | MtrunA17_Chr2g0322861 | 39.564 | 321 | 169 | 7 | 10 | 312 | 73 | 386 | 3.34e-70 | 223 |
Msa0310060 | MtrunA17_Chr4g0043391 | 41.692 | 331 | 164 | 11 | 1 | 312 | 4 | 324 | 8.55e-70 | 219 |
Msa0310060 | MtrunA17_Chr5g0402581 | 38.769 | 325 | 175 | 7 | 4 | 312 | 10 | 326 | 2.48e-69 | 218 |
Msa0310060 | MtrunA17_Chr4g0038171 | 41.088 | 331 | 166 | 11 | 1 | 312 | 1 | 321 | 3.19e-69 | 218 |
Msa0310060 | MtrunA17_Chr1g0175561 | 39.077 | 325 | 172 | 10 | 8 | 312 | 8 | 326 | 3.36e-69 | 218 |
Msa0310060 | MtrunA17_Chr7g0258811 | 39.818 | 329 | 171 | 10 | 3 | 312 | 51 | 371 | 4.38e-69 | 219 |
Msa0310060 | MtrunA17_Chr2g0292211 | 39.752 | 322 | 171 | 7 | 9 | 312 | 25 | 341 | 7.78e-68 | 216 |
Msa0310060 | MtrunA17_Chr2g0292271 | 39.697 | 330 | 176 | 8 | 1 | 312 | 6 | 330 | 1.20e-67 | 215 |
Msa0310060 | MtrunA17_Chr4g0038151 | 40.181 | 331 | 169 | 10 | 1 | 312 | 1 | 321 | 2.75e-67 | 213 |
Msa0310060 | MtrunA17_Chr2g0292181 | 38.138 | 333 | 179 | 8 | 2 | 312 | 12 | 339 | 6.72e-67 | 213 |
Msa0310060 | MtrunA17_Chr2g0292151 | 39.550 | 311 | 165 | 8 | 20 | 312 | 25 | 330 | 1.21e-66 | 212 |
Msa0310060 | MtrunA17_Chr4g0038161 | 40.000 | 330 | 170 | 9 | 1 | 312 | 1 | 320 | 3.00e-66 | 210 |
Msa0310060 | MtrunA17_Chr2g0291751 | 39.252 | 321 | 168 | 9 | 12 | 312 | 17 | 330 | 3.31e-66 | 211 |
Msa0310060 | MtrunA17_Chr2g0292251 | 40.514 | 311 | 162 | 8 | 20 | 312 | 24 | 329 | 7.82e-66 | 210 |
Msa0310060 | MtrunA17_Chr1g0157051 | 35.714 | 322 | 185 | 5 | 1 | 308 | 1 | 314 | 1.28e-65 | 209 |
Msa0310060 | MtrunA17_Chr2g0292111 | 37.237 | 333 | 182 | 9 | 2 | 312 | 3 | 330 | 6.04e-65 | 208 |
Msa0310060 | MtrunA17_Chr2g0299691 | 39.385 | 325 | 175 | 7 | 6 | 312 | 38 | 358 | 1.33e-64 | 207 |
Msa0310060 | MtrunA17_Chr2g0292261 | 38.739 | 333 | 177 | 9 | 2 | 312 | 3 | 330 | 3.28e-64 | 206 |
Msa0310060 | MtrunA17_Chr7g0254231 | 39.604 | 303 | 156 | 7 | 24 | 312 | 22 | 311 | 1.41e-63 | 203 |
Msa0310060 | MtrunA17_Chr7g0244451 | 38.558 | 319 | 167 | 8 | 11 | 312 | 10 | 316 | 1.82e-63 | 203 |
Msa0310060 | MtrunA17_Chr2g0292241 | 39.228 | 311 | 166 | 7 | 20 | 312 | 25 | 330 | 3.05e-63 | 204 |
Msa0310060 | MtrunA17_Chr4g0024121 | 37.654 | 324 | 180 | 7 | 6 | 312 | 8 | 326 | 3.23e-63 | 202 |
Msa0310060 | MtrunA17_Chr2g0292091 | 38.253 | 332 | 178 | 10 | 1 | 312 | 1 | 325 | 1.55e-62 | 201 |
Msa0310060 | MtrunA17_Chr4g0068621 | 38.387 | 310 | 167 | 8 | 20 | 312 | 34 | 336 | 1.66e-62 | 201 |
Msa0310060 | MtrunA17_Chr5g0404721 | 40.196 | 306 | 161 | 10 | 24 | 312 | 30 | 330 | 3.06e-62 | 200 |
Msa0310060 | MtrunA17_Chr7g0244461 | 36.533 | 323 | 176 | 7 | 5 | 312 | 4 | 312 | 1.15e-61 | 198 |
Msa0310060 | MtrunA17_Chr3g0129051 | 38.291 | 316 | 167 | 8 | 10 | 308 | 14 | 318 | 1.28e-61 | 198 |
Msa0310060 | MtrunA17_Chr5g0432441 | 39.755 | 327 | 166 | 9 | 5 | 312 | 12 | 326 | 9.16e-61 | 196 |
Msa0310060 | MtrunA17_Chr3g0106921 | 38.650 | 326 | 168 | 9 | 6 | 312 | 8 | 320 | 1.01e-60 | 196 |
Msa0310060 | MtrunA17_Chr6g0460711 | 37.658 | 316 | 178 | 7 | 9 | 312 | 6 | 314 | 4.08e-60 | 194 |
Msa0310060 | MtrunA17_Chr7g0268501 | 37.805 | 328 | 178 | 8 | 1 | 312 | 3 | 320 | 1.05e-59 | 193 |
Msa0310060 | MtrunA17_Chr7g0268521 | 37.805 | 328 | 178 | 8 | 1 | 312 | 3 | 320 | 1.05e-59 | 193 |
Msa0310060 | MtrunA17_Chr7g0254201 | 36.513 | 304 | 171 | 6 | 22 | 312 | 18 | 312 | 1.64e-59 | 193 |
Msa0310060 | MtrunA17_Chr3g0128061 | 37.963 | 324 | 176 | 10 | 8 | 312 | 9 | 326 | 1.68e-59 | 193 |
Msa0310060 | MtrunA17_Chr4g0013191 | 39.048 | 315 | 163 | 10 | 16 | 312 | 37 | 340 | 2.23e-59 | 193 |
Msa0310060 | MtrunA17_Chr4g0013171 | 36.747 | 332 | 179 | 8 | 1 | 312 | 1 | 321 | 6.61e-59 | 191 |
Msa0310060 | MtrunA17_Chr1g0194151 | 36.145 | 332 | 182 | 8 | 6 | 312 | 7 | 333 | 8.61e-59 | 191 |
Msa0310060 | MtrunA17_Chr6g0477071 | 37.086 | 302 | 164 | 8 | 24 | 312 | 54 | 342 | 1.05e-58 | 191 |
Msa0310060 | MtrunA17_Chr2g0292291 | 35.928 | 334 | 186 | 10 | 2 | 312 | 4 | 332 | 1.57e-58 | 191 |
Msa0310060 | MtrunA17_Chr5g0438021 | 36.310 | 336 | 179 | 10 | 1 | 312 | 1 | 325 | 2.30e-58 | 190 |
Msa0310060 | MtrunA17_Chr8g0372601 | 37.459 | 307 | 172 | 6 | 22 | 312 | 28 | 330 | 2.56e-58 | 190 |
Msa0310060 | MtrunA17_Chr1g0204011 | 33.962 | 318 | 189 | 5 | 9 | 312 | 12 | 322 | 2.86e-58 | 190 |
Msa0310060 | MtrunA17_Chr7g0225221 | 36.842 | 323 | 180 | 7 | 5 | 312 | 7 | 320 | 5.63e-58 | 189 |
Msa0310060 | MtrunA17_Chr2g0329641 | 39.228 | 311 | 162 | 8 | 21 | 312 | 33 | 335 | 7.32e-58 | 189 |
Msa0310060 | MtrunA17_Chr8g0371381 | 35.644 | 303 | 172 | 5 | 24 | 312 | 26 | 319 | 7.80e-58 | 189 |
Msa0310060 | MtrunA17_Chr1g0148021 | 33.939 | 330 | 195 | 6 | 1 | 312 | 4 | 328 | 9.25e-58 | 189 |
Msa0310060 | MtrunA17_Chr2g0296621 | 37.086 | 302 | 167 | 7 | 24 | 312 | 50 | 341 | 5.94e-57 | 187 |
Msa0310060 | MtrunA17_Chr2g0320071 | 35.474 | 327 | 182 | 7 | 1 | 312 | 5 | 317 | 6.67e-57 | 186 |
Msa0310060 | MtrunA17_Chr3g0129061 | 37.658 | 316 | 169 | 9 | 10 | 308 | 14 | 318 | 6.72e-57 | 186 |
Msa0310060 | MtrunA17_Chr3g0114451 | 36.391 | 327 | 175 | 7 | 8 | 312 | 3 | 318 | 2.00e-56 | 185 |
Msa0310060 | MtrunA17_Chr2g0292101 | 35.976 | 328 | 183 | 9 | 5 | 312 | 6 | 326 | 2.99e-56 | 185 |
Msa0310060 | MtrunA17_Chr2g0320101 | 35.366 | 328 | 185 | 7 | 1 | 312 | 1 | 317 | 1.03e-55 | 183 |
Msa0310060 | MtrunA17_Chr2g0320051 | 36.923 | 325 | 175 | 9 | 4 | 312 | 8 | 318 | 1.47e-55 | 182 |
Msa0310060 | MtrunA17_Chr4g0013181 | 37.086 | 302 | 162 | 7 | 28 | 312 | 63 | 353 | 1.91e-55 | 183 |
Msa0310060 | MtrunA17_Chr5g0405991 | 35.061 | 328 | 185 | 9 | 1 | 312 | 1 | 316 | 7.92e-55 | 181 |
Msa0310060 | MtrunA17_Chr2g0320091 | 35.562 | 329 | 184 | 8 | 1 | 312 | 1 | 318 | 1.00e-54 | 181 |
Msa0310060 | MtrunA17_Chr5g0401431 | 35.780 | 327 | 183 | 9 | 4 | 309 | 6 | 326 | 2.95e-54 | 179 |
Msa0310060 | MtrunA17_Chr2g0320061 | 36.890 | 328 | 171 | 12 | 4 | 312 | 8 | 318 | 5.00e-54 | 179 |
Msa0310060 | MtrunA17_Chr4g0076211 | 36.000 | 300 | 170 | 6 | 26 | 312 | 43 | 333 | 7.34e-54 | 179 |
Msa0310060 | MtrunA17_Chr3g0136751 | 34.862 | 327 | 187 | 7 | 2 | 312 | 6 | 322 | 1.52e-53 | 177 |
Msa0310060 | MtrunA17_Chr1g0194271 | 34.218 | 339 | 186 | 8 | 6 | 312 | 7 | 340 | 2.00e-53 | 178 |
Msa0310060 | MtrunA17_Chr1g0188431 | 35.185 | 324 | 176 | 9 | 10 | 312 | 17 | 327 | 2.75e-53 | 177 |
Msa0310060 | MtrunA17_Chr2g0316191 | 34.030 | 335 | 170 | 8 | 22 | 309 | 74 | 404 | 5.08e-53 | 179 |
Msa0310060 | MtrunA17_Chr2g0316791 | 34.132 | 334 | 170 | 9 | 22 | 309 | 74 | 403 | 1.09e-52 | 177 |
Msa0310060 | MtrunA17_Chr2g0316831 | 34.030 | 335 | 169 | 9 | 22 | 309 | 110 | 439 | 1.41e-52 | 178 |
Msa0310060 | MtrunA17_Chr1g0213061 | 34.462 | 325 | 183 | 8 | 6 | 312 | 9 | 321 | 1.56e-52 | 175 |
Msa0310060 | MtrunA17_Chr1g0197411 | 36.000 | 325 | 182 | 9 | 9 | 312 | 11 | 330 | 3.04e-52 | 174 |
Msa0310060 | MtrunA17_Chr3g0106901 | 37.273 | 330 | 178 | 7 | 1 | 312 | 5 | 323 | 3.58e-52 | 174 |
Msa0310060 | MtrunA17_Chr4g0072091 | 37.255 | 306 | 171 | 8 | 23 | 312 | 23 | 323 | 4.73e-52 | 174 |
Msa0310060 | MtrunA17_Chr4g0013201 | 35.294 | 306 | 172 | 7 | 22 | 312 | 44 | 338 | 5.05e-52 | 174 |
Msa0310060 | MtrunA17_Chr7g0224371 | 35.802 | 324 | 178 | 9 | 6 | 312 | 12 | 322 | 1.12e-51 | 173 |
Msa0310060 | MtrunA17_Chr1g0164891 | 35.714 | 308 | 173 | 8 | 25 | 312 | 90 | 392 | 1.31e-51 | 174 |
Msa0310060 | MtrunA17_Chr2g0320031 | 34.056 | 323 | 186 | 7 | 6 | 312 | 8 | 319 | 2.76e-51 | 172 |
Msa0310060 | MtrunA17_Chr3g0129041 | 36.875 | 320 | 174 | 8 | 10 | 312 | 14 | 322 | 3.55e-51 | 171 |
Msa0310060 | MtrunA17_Chr2g0316481 | 32.934 | 334 | 174 | 8 | 22 | 309 | 74 | 403 | 4.29e-51 | 174 |
Msa0310060 | MtrunA17_Chr4g0013721 | 36.218 | 312 | 175 | 8 | 17 | 312 | 93 | 396 | 3.39e-50 | 171 |
Msa0310060 | MtrunA17_Chr5g0400331 | 36.991 | 319 | 171 | 9 | 17 | 312 | 20 | 331 | 8.07e-50 | 168 |
Msa0310060 | MtrunA17_Chr4g0053871 | 35.152 | 330 | 178 | 11 | 5 | 311 | 7 | 323 | 1.04e-49 | 167 |
Msa0310060 | MtrunA17_Chr3g0107881 | 35.152 | 330 | 180 | 10 | 3 | 312 | 9 | 324 | 4.08e-49 | 166 |
Msa0310060 | MtrunA17_Chr4g0013821 | 35.275 | 309 | 176 | 9 | 20 | 312 | 24 | 324 | 3.94e-48 | 164 |
Msa0310060 | MtrunA17_Chr2g0311251 | 32.335 | 334 | 175 | 8 | 22 | 309 | 9 | 337 | 5.35e-48 | 164 |
Msa0310060 | MtrunA17_Chr4g0046131 | 34.795 | 342 | 184 | 9 | 2 | 309 | 7 | 343 | 7.84e-48 | 163 |
Msa0310060 | MtrunA17_Chr1g0155611 | 36.513 | 304 | 168 | 8 | 28 | 312 | 50 | 347 | 2.58e-46 | 159 |
Msa0310060 | MtrunA17_Chr8g0364291 | 34.132 | 334 | 183 | 11 | 5 | 312 | 2 | 324 | 2.73e-46 | 159 |
Msa0310060 | MtrunA17_Chr5g0432331 | 33.750 | 320 | 180 | 10 | 13 | 312 | 45 | 352 | 2.83e-45 | 157 |
Msa0310060 | MtrunA17_Chr5g0432351 | 32.934 | 334 | 182 | 11 | 4 | 312 | 5 | 321 | 7.26e-45 | 155 |
Msa0310060 | MtrunA17_Chr2g0311241 | 29.412 | 374 | 174 | 7 | 22 | 309 | 58 | 427 | 2.57e-44 | 156 |
Msa0310060 | MtrunA17_Chr5g0421411 | 35.154 | 293 | 152 | 9 | 47 | 312 | 4 | 285 | 4.02e-44 | 152 |
Msa0310060 | MtrunA17_Chr5g0432341 | 33.133 | 332 | 180 | 11 | 6 | 312 | 7 | 321 | 5.80e-44 | 152 |
Msa0310060 | MtrunA17_Chr6g0451571 | 32.923 | 325 | 188 | 9 | 9 | 312 | 19 | 334 | 2.51e-43 | 151 |
Msa0310060 | MtrunA17_Chr2g0316811 | 36.325 | 234 | 113 | 6 | 22 | 221 | 48 | 279 | 8.71e-42 | 147 |
Msa0310060 | MtrunA17_Chr4g0075241 | 32.484 | 314 | 176 | 10 | 22 | 312 | 27 | 327 | 2.56e-41 | 146 |
Msa0310060 | MtrunA17_Chr6g0467251 | 32.121 | 330 | 191 | 7 | 5 | 312 | 10 | 328 | 7.76e-41 | 145 |
Msa0310060 | MtrunA17_Chr5g0432401 | 33.654 | 312 | 155 | 11 | 9 | 308 | 11 | 282 | 1.16e-40 | 143 |
Msa0310060 | MtrunA17_Chr1g0181511 | 31.210 | 314 | 180 | 8 | 21 | 312 | 24 | 323 | 1.56e-40 | 144 |
Msa0310060 | MtrunA17_Chr4g0074851 | 29.607 | 331 | 202 | 7 | 4 | 312 | 7 | 328 | 1.90e-39 | 141 |
Msa0310060 | MtrunA17_Chr6g0467161 | 31.683 | 303 | 182 | 7 | 24 | 312 | 45 | 336 | 3.28e-39 | 140 |
Msa0310060 | MtrunA17_Chr5g0413051 | 31.529 | 314 | 187 | 9 | 21 | 312 | 70 | 377 | 3.05e-38 | 139 |
Msa0310060 | MtrunA17_Chr1g0181481 | 30.255 | 314 | 183 | 7 | 21 | 312 | 24 | 323 | 2.17e-36 | 133 |
Msa0310060 | MtrunA17_Chr6g0467121 | 29.217 | 332 | 201 | 9 | 3 | 312 | 44 | 363 | 2.72e-36 | 134 |
Msa0310060 | MtrunA17_Chr1g0181431 | 30.032 | 313 | 183 | 7 | 22 | 312 | 25 | 323 | 5.21e-36 | 132 |
Msa0310060 | MtrunA17_Chr3g0114491 | 50.435 | 115 | 53 | 3 | 18 | 129 | 13 | 126 | 2.55e-29 | 109 |
Msa0310060 | MtrunA17_Chr4g0004591 | 27.273 | 319 | 157 | 7 | 24 | 309 | 77 | 353 | 9.12e-29 | 113 |
Msa0310060 | MtrunA17_Chr2g0292281 | 35.211 | 213 | 112 | 7 | 113 | 312 | 17 | 216 | 4.98e-28 | 108 |
Msa0310060 | MtrunA17_Chr2g0316141 | 29.710 | 276 | 147 | 8 | 70 | 309 | 11 | 275 | 2.95e-27 | 107 |
Msa0310060 | MtrunA17_Chr2g0316181 | 29.710 | 276 | 147 | 8 | 70 | 309 | 11 | 275 | 2.95e-27 | 107 |
Msa0310060 | MtrunA17_Chr6g0468731 | 61.765 | 68 | 25 | 1 | 63 | 130 | 22 | 88 | 2.25e-23 | 92.0 |
Msa0310060 | MtrunA17_Chr1g0181491 | 42.478 | 113 | 60 | 3 | 21 | 130 | 9 | 119 | 1.62e-21 | 89.0 |
Msa0310060 | MtrunA17_Chr7g0254181 | 44.681 | 94 | 50 | 1 | 84 | 177 | 22 | 113 | 2.19e-19 | 83.2 |
Msa0310060 | MtrunA17_Chr3g0114461 | 29.146 | 199 | 117 | 5 | 127 | 312 | 5 | 192 | 1.13e-14 | 71.2 |
Msa0310060 | MtrunA17_Chr7g0254171 | 43.678 | 87 | 46 | 2 | 70 | 153 | 4 | 90 | 1.96e-14 | 69.3 |
Msa0310060 | MtrunA17_Chr1g0196191 | 46.914 | 81 | 39 | 2 | 50 | 128 | 13 | 91 | 9.62e-14 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0310060 | AT4G25980.1 | 62.579 | 318 | 104 | 3 | 7 | 312 | 12 | 326 | 2.85e-139 | 397 |
Msa0310060 | AT1G77100.1 | 52.960 | 321 | 131 | 5 | 5 | 312 | 6 | 319 | 7.14e-105 | 309 |
Msa0310060 | AT2G41480.1 | 46.462 | 325 | 160 | 4 | 1 | 312 | 5 | 328 | 2.55e-95 | 285 |
Msa0310060 | AT5G64120.1 | 45.246 | 305 | 150 | 4 | 19 | 312 | 30 | 328 | 2.12e-86 | 263 |
Msa0310060 | AT5G39580.1 | 42.679 | 321 | 164 | 4 | 4 | 312 | 7 | 319 | 5.21e-83 | 253 |
Msa0310060 | AT5G64100.1 | 42.943 | 333 | 160 | 8 | 4 | 312 | 5 | 331 | 1.73e-77 | 240 |
Msa0310060 | AT5G17820.1 | 43.574 | 319 | 156 | 8 | 6 | 312 | 7 | 313 | 1.90e-77 | 239 |
Msa0310060 | AT5G17820.2 | 43.574 | 319 | 156 | 8 | 6 | 312 | 60 | 366 | 1.14e-76 | 239 |
Msa0310060 | AT1G05260.1 | 41.486 | 323 | 170 | 7 | 5 | 312 | 7 | 325 | 5.81e-75 | 233 |
Msa0310060 | AT5G64110.1 | 41.975 | 324 | 162 | 7 | 9 | 312 | 13 | 330 | 1.95e-74 | 232 |
Msa0310060 | AT5G15180.1 | 41.590 | 327 | 171 | 8 | 1 | 312 | 8 | 329 | 1.90e-73 | 229 |
Msa0310060 | AT3G01190.1 | 41.745 | 321 | 168 | 6 | 5 | 312 | 7 | 321 | 1.07e-72 | 227 |
Msa0310060 | AT4G11290.1 | 41.231 | 325 | 168 | 7 | 7 | 312 | 6 | 326 | 3.90e-71 | 223 |
Msa0310060 | AT4G25980.2 | 67.532 | 154 | 50 | 0 | 20 | 173 | 67 | 220 | 3.15e-70 | 219 |
Msa0310060 | AT3G21770.1 | 40.129 | 309 | 166 | 6 | 16 | 309 | 21 | 325 | 5.76e-70 | 220 |
Msa0310060 | AT1G05240.1 | 40.728 | 302 | 158 | 7 | 24 | 309 | 26 | 322 | 7.56e-70 | 220 |
Msa0310060 | AT1G05250.1 | 40.728 | 302 | 158 | 7 | 24 | 309 | 26 | 322 | 7.56e-70 | 220 |
Msa0310060 | AT1G49570.1 | 42.395 | 309 | 154 | 9 | 19 | 308 | 43 | 346 | 3.78e-68 | 216 |
Msa0310060 | AT4G36430.1 | 39.441 | 322 | 172 | 9 | 9 | 312 | 14 | 330 | 1.37e-65 | 209 |
Msa0310060 | AT4G26010.1 | 38.365 | 318 | 169 | 6 | 8 | 312 | 6 | 309 | 1.89e-64 | 206 |
Msa0310060 | AT4G26010.2 | 38.365 | 318 | 169 | 6 | 8 | 312 | 34 | 337 | 2.50e-64 | 206 |
Msa0310060 | AT2G18150.1 | 35.714 | 336 | 186 | 8 | 2 | 312 | 6 | 336 | 3.34e-64 | 206 |
Msa0310060 | AT5G06730.1 | 36.086 | 327 | 186 | 8 | 4 | 312 | 13 | 334 | 6.66e-63 | 203 |
Msa0310060 | AT4G37530.1 | 39.117 | 317 | 165 | 8 | 17 | 312 | 20 | 329 | 1.17e-62 | 202 |
Msa0310060 | AT2G18140.1 | 35.224 | 335 | 188 | 8 | 2 | 312 | 6 | 335 | 1.34e-62 | 202 |
Msa0310060 | AT1G14550.1 | 37.273 | 330 | 180 | 7 | 1 | 312 | 1 | 321 | 1.90e-62 | 201 |
Msa0310060 | AT3G03670.1 | 37.805 | 328 | 174 | 8 | 3 | 312 | 6 | 321 | 2.55e-62 | 201 |
Msa0310060 | AT1G14540.1 | 38.110 | 328 | 174 | 8 | 1 | 312 | 1 | 315 | 3.80e-62 | 200 |
Msa0310060 | AT3G32980.1 | 37.576 | 330 | 179 | 9 | 5 | 312 | 10 | 334 | 5.06e-62 | 201 |
Msa0310060 | AT3G49960.1 | 40.059 | 337 | 169 | 13 | 1 | 312 | 1 | 329 | 6.49e-62 | 200 |
Msa0310060 | AT5G05340.1 | 39.159 | 309 | 160 | 9 | 21 | 312 | 27 | 324 | 1.53e-61 | 199 |
Msa0310060 | AT1G34510.1 | 38.125 | 320 | 167 | 8 | 8 | 312 | 6 | 309 | 7.17e-61 | 196 |
Msa0310060 | AT5G19890.1 | 36.474 | 329 | 183 | 10 | 1 | 312 | 8 | 327 | 9.58e-61 | 197 |
Msa0310060 | AT4G37520.1 | 37.742 | 310 | 169 | 7 | 22 | 312 | 25 | 329 | 1.21e-60 | 196 |
Msa0310060 | AT4G30170.1 | 36.601 | 306 | 174 | 5 | 22 | 312 | 25 | 325 | 3.42e-60 | 195 |
Msa0310060 | AT4G08780.1 | 37.061 | 313 | 172 | 8 | 20 | 312 | 20 | 327 | 3.43e-60 | 196 |
Msa0310060 | AT5G67400.1 | 38.209 | 335 | 178 | 10 | 1 | 312 | 1 | 329 | 7.75e-60 | 194 |
Msa0310060 | AT3G49110.1 | 37.380 | 313 | 171 | 8 | 20 | 312 | 29 | 336 | 4.26e-59 | 193 |
Msa0310060 | AT5G51890.1 | 35.987 | 314 | 178 | 8 | 5 | 301 | 7 | 314 | 4.47e-59 | 192 |
Msa0310060 | AT5G66390.1 | 36.977 | 311 | 174 | 7 | 19 | 312 | 28 | 333 | 1.20e-58 | 191 |
Msa0310060 | AT2G18980.1 | 35.404 | 322 | 187 | 6 | 7 | 312 | 7 | 323 | 2.16e-58 | 191 |
Msa0310060 | AT5G58400.1 | 38.509 | 322 | 166 | 10 | 6 | 308 | 13 | 321 | 2.46e-58 | 190 |
Msa0310060 | AT4G37520.2 | 37.742 | 310 | 166 | 8 | 22 | 312 | 25 | 326 | 2.52e-58 | 190 |
Msa0310060 | AT5G22410.1 | 37.578 | 322 | 173 | 9 | 7 | 308 | 8 | 321 | 3.40e-58 | 190 |
Msa0310060 | AT5G06720.1 | 35.385 | 325 | 187 | 9 | 6 | 312 | 14 | 333 | 3.75e-58 | 190 |
Msa0310060 | AT5G42180.1 | 34.700 | 317 | 187 | 5 | 6 | 307 | 5 | 316 | 8.87e-58 | 189 |
Msa0310060 | AT4G08770.1 | 36.164 | 318 | 178 | 8 | 15 | 312 | 15 | 327 | 2.70e-57 | 188 |
Msa0310060 | AT3G49120.1 | 36.741 | 313 | 173 | 8 | 20 | 312 | 28 | 335 | 1.24e-56 | 187 |
Msa0310060 | AT5G19880.1 | 37.117 | 326 | 177 | 8 | 10 | 312 | 9 | 329 | 6.09e-56 | 184 |
Msa0310060 | AT2G38390.1 | 35.423 | 319 | 182 | 8 | 13 | 312 | 20 | 333 | 1.67e-55 | 184 |
Msa0310060 | AT2G38380.1 | 35.294 | 323 | 185 | 8 | 9 | 312 | 16 | 333 | 5.35e-55 | 182 |
Msa0310060 | AT3G50990.1 | 34.940 | 332 | 183 | 9 | 7 | 312 | 17 | 341 | 2.74e-54 | 181 |
Msa0310060 | AT4G33870.1 | 32.000 | 350 | 182 | 10 | 11 | 309 | 54 | 398 | 5.16e-54 | 181 |
Msa0310060 | AT5G14130.1 | 35.671 | 328 | 185 | 9 | 1 | 312 | 13 | 330 | 1.86e-53 | 178 |
Msa0310060 | AT5G14130.2 | 35.671 | 328 | 185 | 9 | 1 | 312 | 54 | 371 | 4.47e-53 | 178 |
Msa0310060 | AT5G58390.1 | 36.050 | 319 | 173 | 8 | 9 | 308 | 6 | 312 | 1.77e-52 | 175 |
Msa0310060 | AT4G16270.1 | 36.601 | 306 | 170 | 8 | 24 | 312 | 50 | 348 | 2.52e-52 | 176 |
Msa0310060 | AT1G44970.1 | 37.217 | 309 | 171 | 7 | 22 | 312 | 43 | 346 | 3.17e-52 | 175 |
Msa0310060 | AT1G68850.1 | 33.236 | 343 | 185 | 13 | 6 | 312 | 1 | 335 | 2.24e-50 | 170 |
Msa0310060 | AT2G43480.1 | 37.267 | 322 | 166 | 12 | 15 | 312 | 26 | 335 | 2.70e-50 | 170 |
Msa0310060 | AT4G17690.1 | 37.294 | 303 | 162 | 10 | 28 | 312 | 30 | 322 | 3.95e-50 | 169 |
Msa0310060 | AT5G47000.1 | 36.637 | 333 | 172 | 11 | 4 | 312 | 13 | 330 | 6.87e-50 | 169 |
Msa0310060 | AT5G24070.1 | 34.503 | 342 | 187 | 9 | 1 | 312 | 1 | 335 | 8.51e-50 | 169 |
Msa0310060 | AT4G31760.1 | 33.750 | 320 | 187 | 6 | 10 | 312 | 15 | 326 | 3.55e-49 | 167 |
Msa0310060 | AT4G33420.1 | 35.762 | 302 | 168 | 8 | 24 | 312 | 37 | 325 | 2.48e-48 | 164 |
Msa0310060 | AT1G71695.1 | 34.967 | 306 | 172 | 9 | 24 | 312 | 44 | 339 | 3.67e-48 | 165 |
Msa0310060 | AT4G33420.2 | 35.762 | 302 | 168 | 8 | 24 | 312 | 84 | 372 | 9.89e-48 | 164 |
Msa0310060 | AT2G24800.1 | 34.740 | 308 | 177 | 7 | 22 | 312 | 29 | 329 | 1.59e-47 | 162 |
Msa0310060 | AT2G35380.1 | 34.615 | 338 | 181 | 9 | 5 | 312 | 8 | 335 | 3.64e-47 | 162 |
Msa0310060 | AT5G39580.2 | 47.904 | 167 | 84 | 2 | 4 | 170 | 7 | 170 | 5.90e-47 | 158 |
Msa0310060 | AT2G34060.1 | 36.129 | 310 | 172 | 7 | 23 | 311 | 41 | 345 | 1.15e-46 | 160 |
Msa0310060 | AT3G28200.1 | 35.144 | 313 | 170 | 10 | 20 | 312 | 17 | 316 | 4.36e-46 | 158 |
Msa0310060 | AT4G37530.2 | 37.692 | 260 | 139 | 7 | 17 | 255 | 20 | 277 | 6.14e-46 | 157 |
Msa0310060 | AT1G30870.1 | 33.663 | 303 | 179 | 8 | 24 | 312 | 51 | 345 | 1.41e-44 | 155 |
Msa0310060 | AT5G40150.1 | 34.405 | 311 | 178 | 7 | 19 | 312 | 27 | 328 | 2.94e-44 | 154 |
Msa0310060 | AT2G22420.1 | 31.562 | 320 | 195 | 8 | 9 | 312 | 8 | 319 | 3.49e-44 | 154 |
Msa0310060 | AT2G39040.1 | 33.438 | 317 | 177 | 9 | 21 | 312 | 43 | 350 | 6.78e-43 | 151 |
Msa0310060 | AT1G24110.1 | 32.476 | 311 | 184 | 6 | 21 | 312 | 19 | 322 | 7.00e-42 | 147 |
Msa0310060 | AT4G21960.1 | 32.581 | 310 | 175 | 9 | 24 | 312 | 31 | 327 | 9.09e-42 | 147 |
Msa0310060 | AT3G17070.1 | 30.275 | 327 | 199 | 7 | 4 | 308 | 16 | 335 | 2.81e-37 | 136 |
Msa0310060 | AT2G24800.2 | 41.341 | 179 | 98 | 4 | 22 | 194 | 29 | 206 | 2.52e-35 | 128 |
Msa0310060 | AT2G37130.1 | 30.032 | 313 | 182 | 9 | 23 | 312 | 29 | 327 | 9.22e-33 | 124 |
Msa0310060 | AT2G37130.2 | 30.000 | 310 | 180 | 9 | 26 | 312 | 1 | 296 | 6.02e-32 | 120 |
Msa0310060 | AT2G35380.2 | 31.496 | 254 | 139 | 7 | 84 | 312 | 4 | 247 | 4.53e-26 | 103 |
Msa0310060 | AT3G17070.2 | 28.897 | 263 | 159 | 7 | 66 | 308 | 18 | 272 | 2.53e-22 | 94.7 |
Find 59 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGCACCTTGCTTTCAGTTC+TGG | 0.179644 | 2_4:-4926794 | None:intergenic |
GGTCCAAATGTTGGATTTAT+AGG | 0.216242 | 2_4:-4926983 | None:intergenic |
GGCACCTTGCTTTCAGTTCT+GGG | 0.266441 | 2_4:-4926793 | None:intergenic |
TCAGTTCTGGGAGGAAATTC+AGG | 0.277375 | 2_4:-4926781 | None:intergenic |
TTGTTGATATCTCCATCCTT+AGG | 0.338339 | 2_4:-4926815 | None:intergenic |
AATCCTATAAATCCAACATT+TGG | 0.339432 | 2_4:+4926980 | Msa0310060:CDS |
TTATTCTTAATCTTAATTGA+TGG | 0.347013 | 2_4:+4924550 | Msa0310060:CDS |
CCATGGCTGCTGTTCTTCTC+AGG | 0.361244 | 2_4:+4924674 | Msa0310060:CDS |
TGTGGAGATGCAGTCTTCTC+TGG | 0.367035 | 2_4:-4924845 | None:intergenic |
AGAAAGAGCCAAGGCACAAT+TGG | 0.384350 | 2_4:+4924895 | Msa0310060:CDS |
TCTCCACATGCAGGTGTTAG+AGG | 0.385000 | 2_4:+4924860 | Msa0310060:CDS |
AATTCAGCTGCACATACAAT+TGG | 0.414747 | 2_4:+4926686 | Msa0310060:intron |
AGGAAATTCAGGTTAATAGT+TGG | 0.429063 | 2_4:-4926770 | None:intergenic |
TGTTGATATCTCCATCCTTA+GGG | 0.431103 | 2_4:-4926814 | None:intergenic |
CAGGTTCTGTTGGAAACATT+AGG | 0.432651 | 2_4:+4927065 | Msa0310060:CDS |
GGAAATTCAGGTTAATAGTT+GGG | 0.434698 | 2_4:-4926769 | None:intergenic |
TTGTGCAGATATTGTTGCTT+TGG | 0.448468 | 2_4:+4924943 | Msa0310060:CDS |
CCTGCATATCAAGTTCCAAC+AGG | 0.455143 | 2_4:+4925160 | Msa0310060:CDS |
CCTGTTGGAACTTGATATGC+AGG | 0.459129 | 2_4:-4925160 | None:intergenic |
GAGACCCTTGTTCAGAAACT+TGG | 0.470684 | 2_4:-4925263 | None:intergenic |
ATAGTTGGGTCTGATCCAAA+TGG | 0.477620 | 2_4:-4926755 | None:intergenic |
TGGATTTATAGGATTAAAGT+AGG | 0.481291 | 2_4:-4926972 | None:intergenic |
AACAGGGAGAAGAGATGGAT+TGG | 0.483056 | 2_4:+4925177 | Msa0310060:CDS |
TCAAAAGAAGGTCCAAATGT+TGG | 0.498612 | 2_4:-4926992 | None:intergenic |
AAACGTTTAGCCATGGATGA+AGG | 0.499351 | 2_4:+4926836 | Msa0310060:CDS |
GGAGTAAAGACAGGTTCTGT+TGG | 0.500900 | 2_4:+4927055 | Msa0310060:CDS |
AGATGCTTCCAATTGTGCCT+TGG | 0.502270 | 2_4:-4924903 | None:intergenic |
AATCCATCTCTTCTCCCTGT+TGG | 0.503118 | 2_4:-4925175 | None:intergenic |
TCTGCACAAGAAACCACTCC+TGG | 0.512606 | 2_4:-4924929 | None:intergenic |
CAAGGCCAAGTTTCTGAACA+AGG | 0.517501 | 2_4:+4925258 | Msa0310060:CDS |
ATCTCTTGCAGATAATATGC+CGG | 0.534359 | 2_4:+4925210 | Msa0310060:CDS |
CAGATCACTCCCTTCATCCA+TGG | 0.535133 | 2_4:-4926846 | None:intergenic |
TGAATTGAATCATCAACATC+CGG | 0.542004 | 2_4:-4925229 | None:intergenic |
TCTAAGAGTCAGCTTCATGT+TGG | 0.543325 | 2_4:+4924574 | Msa0310060:CDS |
CCTGAGAAGAACAGCAGCCA+TGG | 0.549117 | 2_4:-4924674 | None:intergenic |
TAGTTGGGTCTGATCCAAAT+GGG | 0.549334 | 2_4:-4926754 | None:intergenic |
GTTCCAACAGGGAGAAGAGA+TGG | 0.549752 | 2_4:+4925172 | Msa0310060:CDS |
CAGCTTCTCTAACAACATCA+TGG | 0.559846 | 2_4:-4924636 | None:intergenic |
GGACAAATTGGAGTAAAGAC+AGG | 0.565783 | 2_4:+4927046 | Msa0310060:CDS |
CAATTGGAAGCATCTTGTCC+AGG | 0.568150 | 2_4:+4924911 | Msa0310060:CDS |
AAAGCAAGGTGCCCTAAGGA+TGG | 0.570656 | 2_4:+4926803 | Msa0310060:CDS |
GGAAGCATCTTGTCCAGGAG+TGG | 0.572442 | 2_4:+4924916 | Msa0310060:CDS |
TCCTCCCAGAACTGAAAGCA+AGG | 0.572671 | 2_4:+4926789 | Msa0310060:CDS |
AACGTTTAGCCATGGATGAA+GGG | 0.576082 | 2_4:+4926837 | Msa0310060:CDS |
ACTGAAAGCAAGGTGCCCTA+AGG | 0.579558 | 2_4:+4926799 | Msa0310060:CDS |
TGATGTTACATGTAGGCGAA+TGG | 0.588472 | 2_4:+4925136 | Msa0310060:intron |
AAGACTGCATCTCCACATGC+AGG | 0.590000 | 2_4:+4924851 | Msa0310060:CDS |
TATCAACAAACGTTTAGCCA+TGG | 0.597225 | 2_4:+4926829 | Msa0310060:CDS |
AGCAAGAGATGCAATTGTCA+TGG | 0.601325 | 2_4:+4924967 | Msa0310060:CDS |
TGATTCAATTCAGCAACTCA+AGG | 0.601761 | 2_4:+4925240 | Msa0310060:CDS |
CTCTACTTGAGGACATGTGT+TGG | 0.603991 | 2_4:-4924605 | None:intergenic |
TCTCATAAAGAAGCATGCTG+TGG | 0.627216 | 2_4:-4926711 | None:intergenic |
TATCCTCTAACACCTGCATG+TGG | 0.631759 | 2_4:-4924863 | None:intergenic |
ACCTTGCTTTCAGTTCTGGG+AGG | 0.637941 | 2_4:-4926790 | None:intergenic |
TGGACAGTGGACTCTACTTG+AGG | 0.644794 | 2_4:-4924616 | None:intergenic |
TGATGTGATAGAAAGAGCCA+AGG | 0.661926 | 2_4:+4924886 | Msa0310060:CDS |
TCTAACAACATCATGGACAG+TGG | 0.665227 | 2_4:-4924629 | None:intergenic |
CTGCATATCAAGTTCCAACA+GGG | 0.673250 | 2_4:+4925161 | Msa0310060:CDS |
AAGGCCAAGTTTCTGAACAA+GGG | 0.675709 | 2_4:+4925259 | Msa0310060:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCATAAATTTTTAAATAAG+TGG | + | chr2_4:4926206-4926225 | Msa0310060:intron | 10.0% |
!! | TTATTCTTAATCTTAATTGA+TGG | + | chr2_4:4924550-4924569 | Msa0310060:CDS | 15.0% |
!!! | TTTTTTTAATAATACCACAT+TGG | + | chr2_4:4925026-4925045 | Msa0310060:intron | 15.0% |
!! | AAAATCTTAAAAAAAGTGAT+TGG | - | chr2_4:4925736-4925755 | None:intergenic | 15.0% |
!!! | TCCTTTTGTTTTATTTAATT+GGG | - | chr2_4:4925830-4925849 | None:intergenic | 15.0% |
!!! | ATCCTTTTGTTTTATTTAAT+TGG | - | chr2_4:4925831-4925850 | None:intergenic | 15.0% |
!!! | TTTTGCTTATAAAATTCAAA+CGG | + | chr2_4:4925923-4925942 | Msa0310060:intron | 15.0% |
!! | AAAGAATGTTATGATAAAAT+GGG | - | chr2_4:4925972-4925991 | None:intergenic | 15.0% |
!! | ATGTATGAAAAAAATTTGAT+TGG | + | chr2_4:4926253-4926272 | Msa0310060:intron | 15.0% |
!! | GACTTGTATTATATATTATA+TGG | + | chr2_4:4926405-4926424 | Msa0310060:intron | 15.0% |
!! | ATATCAATTAAATTCTTGTA+CGG | + | chr2_4:4926538-4926557 | Msa0310060:intron | 15.0% |
!!! | TAAGATTTTGTCAATTTTTC+AGG | + | chr2_4:4925747-4925766 | Msa0310060:intron | 20.0% |
!! | TAAATAAAACAAAAGGATCT+TGG | + | chr2_4:4925833-4925852 | Msa0310060:intron | 20.0% |
!! | AAATAAAACAAAAGGATCTT+GGG | + | chr2_4:4925834-4925853 | Msa0310060:intron | 20.0% |
!! | GAAAGAATGTTATGATAAAA+TGG | - | chr2_4:4925973-4925992 | None:intergenic | 20.0% |
!!! | AAGAGAACAAAATTCTAAAA+TGG | - | chr2_4:4926078-4926097 | None:intergenic | 20.0% |
!! | TTTCTGATATAATATGTGAT+TGG | - | chr2_4:4926447-4926466 | None:intergenic | 20.0% |
!! | AATCACATATTATATCAGAA+AGG | + | chr2_4:4926446-4926465 | Msa0310060:intron | 20.0% |
!! | AGAGTATATTGAAAAACATA+AGG | + | chr2_4:4926879-4926898 | Msa0310060:CDS | 20.0% |
!! | GAGTATATTGAAAAACATAA+GGG | + | chr2_4:4926880-4926899 | Msa0310060:CDS | 20.0% |
!!! | ACAAAATCATTTTCAAAAGA+AGG | - | chr2_4:4927007-4927026 | None:intergenic | 20.0% |
! | TTGAGGTCTTTCTATATATA+TGG | + | chr2_4:4924719-4924738 | Msa0310060:intron | 25.0% |
!!! | TGATTTTGATTGAGTTTTTC+AGG | + | chr2_4:4924784-4924803 | Msa0310060:intron | 25.0% |
!!! | GATTTTGATTGAGTTTTTCA+GGG | + | chr2_4:4924785-4924804 | Msa0310060:intron | 25.0% |
! | ATTAGAGTAAGTTAGGAATT+AGG | - | chr2_4:4924994-4925013 | None:intergenic | 25.0% |
! | TGTAACTATTAGAGTAAGTT+AGG | - | chr2_4:4925001-4925020 | None:intergenic | 25.0% |
! | ACACTTATTGAATCATAAAC+AGG | - | chr2_4:4925112-4925131 | None:intergenic | 25.0% |
! | TGTTTATGATTCAATAAGTG+TGG | + | chr2_4:4925111-4925130 | Msa0310060:intron | 25.0% |
! | AAAGTAATATGAACTAGAAC+AGG | + | chr2_4:4925577-4925596 | Msa0310060:intron | 25.0% |
! | AAATAATCACAACAAGACAT+TGG | + | chr2_4:4925613-4925632 | Msa0310060:intron | 25.0% |
! | AATTGAGTAAATCATGTAGT+TGG | - | chr2_4:4925644-4925663 | None:intergenic | 25.0% |
! | ACTACATGATTTACTCAATT+TGG | + | chr2_4:4925644-4925663 | Msa0310060:intron | 25.0% |
! | CTACATGATTTACTCAATTT+GGG | + | chr2_4:4925645-4925664 | Msa0310060:intron | 25.0% |
! | TCTTAAAAAAAGTGATTGGT+TGG | - | chr2_4:4925732-4925751 | None:intergenic | 25.0% |
! | GCCCAATTAAATAAAACAAA+AGG | + | chr2_4:4925826-4925845 | Msa0310060:intron | 25.0% |
! | TTCAATAGAATGGAAAAAGA+AGG | - | chr2_4:4925882-4925901 | None:intergenic | 25.0% |
!!! | AAATTCTAAAATGGTGCAAA+AGG | - | chr2_4:4926069-4926088 | None:intergenic | 25.0% |
! | AAAAATTTGATTGGAATGTG+CGG | + | chr2_4:4926262-4926281 | Msa0310060:intron | 25.0% |
! | ATATCAGTGAACAATTACTA+TGG | - | chr2_4:4926654-4926673 | None:intergenic | 25.0% |
! | ATATTGAAAAACATAAGGGA+AGG | + | chr2_4:4926884-4926903 | Msa0310060:CDS | 25.0% |
! | TGGATTTATAGGATTAAAGT+AGG | - | chr2_4:4926975-4926994 | None:intergenic | 25.0% |
! | AATCCTATAAATCCAACATT+TGG | + | chr2_4:4926980-4926999 | Msa0310060:CDS | 25.0% |
!! | AAATGATTTTGTTCAGTCAA+TGG | + | chr2_4:4927015-4927034 | Msa0310060:CDS | 25.0% |
TGAATTGAATCATCAACATC+CGG | - | chr2_4:4925232-4925251 | None:intergenic | 30.0% | |
! | AGTAAATCATGTAGTTGGTA+TGG | - | chr2_4:4925639-4925658 | None:intergenic | 30.0% |
ATTTGGGAAATTGATAGAGA+AGG | + | chr2_4:4925661-4925680 | Msa0310060:intron | 30.0% | |
TTTGGGAAATTGATAGAGAA+GGG | + | chr2_4:4925662-4925681 | Msa0310060:intron | 30.0% | |
CATCACATTCTTATTACTAG+AGG | + | chr2_4:4926011-4926030 | Msa0310060:intron | 30.0% | |
TGGTTGTAAATCCAGAAAAA+AGG | - | chr2_4:4926041-4926060 | None:intergenic | 30.0% | |
! | CTATACACTTTGCTATCTTT+AGG | - | chr2_4:4926131-4926150 | None:intergenic | 30.0% |
CTCTTCACAAAAATACTTGT+AGG | - | chr2_4:4926303-4926322 | None:intergenic | 30.0% | |
!! | TGCAGCTGAATTTTTGTTTA+TGG | - | chr2_4:4926678-4926697 | None:intergenic | 30.0% |
! | CTATACGAATTTTTCCCATT+TGG | + | chr2_4:4926740-4926759 | Msa0310060:CDS | 30.0% |
! | GGAAATTCAGGTTAATAGTT+GGG | - | chr2_4:4926772-4926791 | None:intergenic | 30.0% |
! | AGGAAATTCAGGTTAATAGT+TGG | - | chr2_4:4926773-4926792 | None:intergenic | 30.0% |
TGTTCAGTCAATGGTAAAAA+TGG | + | chr2_4:4927024-4927043 | Msa0310060:CDS | 30.0% | |
GTTCAGTCAATGGTAAAAAT+GGG | + | chr2_4:4927025-4927044 | Msa0310060:CDS | 30.0% | |
ATGGTAAAAATGGGACAAAT+TGG | + | chr2_4:4927034-4927053 | Msa0310060:CDS | 30.0% | |
! | TGTTCTTTTTGACAGAACCA+TGG | + | chr2_4:4924657-4924676 | Msa0310060:CDS | 35.0% |
!! | TTTTCATGACTGCTTTGTTG+AGG | + | chr2_4:4924702-4924721 | Msa0310060:CDS | 35.0% |
! | TTGTGCAGATATTGTTGCTT+TGG | + | chr2_4:4924943-4924962 | Msa0310060:CDS | 35.0% |
GAAAAGATTTGTGACCAATG+TGG | - | chr2_4:4925043-4925062 | None:intergenic | 35.0% | |
TGTGGAATGATGTTACATGT+AGG | + | chr2_4:4925129-4925148 | Msa0310060:intron | 35.0% | |
ATCTCTTGCAGATAATATGC+CGG | + | chr2_4:4925210-4925229 | Msa0310060:CDS | 35.0% | |
TGATTCAATTCAGCAACTCA+AGG | + | chr2_4:4925240-4925259 | Msa0310060:CDS | 35.0% | |
ATGCAGAGTAAATGAGATCA+TGG | + | chr2_4:4925541-4925560 | Msa0310060:intron | 35.0% | |
TTGTTTAATGAGCCTGTTAC+TGG | + | chr2_4:4925804-4925823 | Msa0310060:intron | 35.0% | |
TATTTAATTGGGCCAGTAAC+AGG | - | chr2_4:4925819-4925838 | None:intergenic | 35.0% | |
!!! | CTAGAGGATAACCTTTTTTC+TGG | + | chr2_4:4926027-4926046 | Msa0310060:intron | 35.0% |
AAATGGTGCAAAAGGAAAGT+TGG | - | chr2_4:4926061-4926080 | None:intergenic | 35.0% | |
AATTCAGCTGCACATACAAT+TGG | + | chr2_4:4926686-4926705 | Msa0310060:intron | 35.0% | |
TGTTGATATCTCCATCCTTA+GGG | - | chr2_4:4926817-4926836 | None:intergenic | 35.0% | |
TTGTTGATATCTCCATCCTT+AGG | - | chr2_4:4926818-4926837 | None:intergenic | 35.0% | |
TATCAACAAACGTTTAGCCA+TGG | + | chr2_4:4926829-4926848 | Msa0310060:CDS | 35.0% | |
GGTCCAAATGTTGGATTTAT+AGG | - | chr2_4:4926986-4927005 | None:intergenic | 35.0% | |
TCAAAAGAAGGTCCAAATGT+TGG | - | chr2_4:4926995-4927014 | None:intergenic | 35.0% | |
TCTAAGAGTCAGCTTCATGT+TGG | + | chr2_4:4924574-4924593 | Msa0310060:CDS | 40.0% | |
TCTAACAACATCATGGACAG+TGG | - | chr2_4:4924632-4924651 | None:intergenic | 40.0% | |
CAGCTTCTCTAACAACATCA+TGG | - | chr2_4:4924639-4924658 | None:intergenic | 40.0% | |
!!! | TGAGTTTTTCAGGGATGTGA+TGG | + | chr2_4:4924794-4924813 | Msa0310060:intron | 40.0% |
TGATGTGATAGAAAGAGCCA+AGG | + | chr2_4:4924886-4924905 | Msa0310060:CDS | 40.0% | |
AGCAAGAGATGCAATTGTCA+TGG | + | chr2_4:4924967-4924986 | Msa0310060:CDS | 40.0% | |
TGATGTTACATGTAGGCGAA+TGG | + | chr2_4:4925136-4925155 | Msa0310060:intron | 40.0% | |
CTGCATATCAAGTTCCAACA+GGG | + | chr2_4:4925161-4925180 | Msa0310060:CDS | 40.0% | |
AAGGCCAAGTTTCTGAACAA+GGG | + | chr2_4:4925259-4925278 | Msa0310060:CDS | 40.0% | |
AAAGACCTTGTTCTTCTCAG+TGG | + | chr2_4:4925292-4925311 | Msa0310060:intron | 40.0% | |
!! | CAGTATCGATGTGTATCATG+TGG | - | chr2_4:4925385-4925404 | None:intergenic | 40.0% |
TGAGATCATGGTTGTTGAAG+TGG | + | chr2_4:4925553-4925572 | Msa0310060:intron | 40.0% | |
CAGGCTCATTAAACAAAGAG+TGG | - | chr2_4:4925800-4925819 | None:intergenic | 40.0% | |
!!! | GGGTCTCTAGGATTATGTTT+TGG | + | chr2_4:4925854-4925873 | Msa0310060:intron | 40.0% |
GCGCGAGAAATTCAATAGAA+TGG | - | chr2_4:4925892-4925911 | None:intergenic | 40.0% | |
! | TCTCATAAAGAAGCATGCTG+TGG | - | chr2_4:4926714-4926733 | None:intergenic | 40.0% |
TAGTTGGGTCTGATCCAAAT+GGG | - | chr2_4:4926757-4926776 | None:intergenic | 40.0% | |
ATAGTTGGGTCTGATCCAAA+TGG | - | chr2_4:4926758-4926777 | None:intergenic | 40.0% | |
AAACGTTTAGCCATGGATGA+AGG | + | chr2_4:4926836-4926855 | Msa0310060:CDS | 40.0% | |
AACGTTTAGCCATGGATGAA+GGG | + | chr2_4:4926837-4926856 | Msa0310060:CDS | 40.0% | |
GGACAAATTGGAGTAAAGAC+AGG | + | chr2_4:4927046-4927065 | Msa0310060:CDS | 40.0% | |
CAGGTTCTGTTGGAAACATT+AGG | + | chr2_4:4927065-4927084 | Msa0310060:CDS | 40.0% | |
CTCTACTTGAGGACATGTGT+TGG | - | chr2_4:4924608-4924627 | None:intergenic | 45.0% | |
TATCCTCTAACACCTGCATG+TGG | - | chr2_4:4924866-4924885 | None:intergenic | 45.0% | |
AGAAAGAGCCAAGGCACAAT+TGG | + | chr2_4:4924895-4924914 | Msa0310060:CDS | 45.0% | |
AGATGCTTCCAATTGTGCCT+TGG | - | chr2_4:4924906-4924925 | None:intergenic | 45.0% | |
!! | CAATTGGAAGCATCTTGTCC+AGG | + | chr2_4:4924911-4924930 | Msa0310060:CDS | 45.0% |
CCTGTTGGAACTTGATATGC+AGG | - | chr2_4:4925163-4925182 | None:intergenic | 45.0% | |
CCTGCATATCAAGTTCCAAC+AGG | + | chr2_4:4925160-4925179 | Msa0310060:CDS | 45.0% | |
AATCCATCTCTTCTCCCTGT+TGG | - | chr2_4:4925178-4925197 | None:intergenic | 45.0% | |
AACAGGGAGAAGAGATGGAT+TGG | + | chr2_4:4925177-4925196 | Msa0310060:CDS | 45.0% | |
CAAGGCCAAGTTTCTGAACA+AGG | + | chr2_4:4925258-4925277 | Msa0310060:CDS | 45.0% | |
GAGACCCTTGTTCAGAAACT+TGG | - | chr2_4:4925266-4925285 | None:intergenic | 45.0% | |
GAGTACCACTGAGAAGAACA+AGG | - | chr2_4:4925300-4925319 | None:intergenic | 45.0% | |
CAAAAGGATCTTGGGTCTCT+AGG | + | chr2_4:4925842-4925861 | Msa0310060:intron | 45.0% | |
!! | TCAGTTCTGGGAGGAAATTC+AGG | - | chr2_4:4926784-4926803 | None:intergenic | 45.0% |
GGAGTAAAGACAGGTTCTGT+TGG | + | chr2_4:4927055-4927074 | Msa0310060:CDS | 45.0% | |
!! | TTAATTAAATATTATGATAT+AGG | + | chr2_4:4925695-4925714 | Msa0310060:intron | 5.0% |
! | TGGACAGTGGACTCTACTTG+AGG | - | chr2_4:4924619-4924638 | None:intergenic | 50.0% |
TGTGGAGATGCAGTCTTCTC+TGG | - | chr2_4:4924848-4924867 | None:intergenic | 50.0% | |
AAGACTGCATCTCCACATGC+AGG | + | chr2_4:4924851-4924870 | Msa0310060:CDS | 50.0% | |
TCTCCACATGCAGGTGTTAG+AGG | + | chr2_4:4924860-4924879 | Msa0310060:CDS | 50.0% | |
TCTGCACAAGAAACCACTCC+TGG | - | chr2_4:4924932-4924951 | None:intergenic | 50.0% | |
GTTCCAACAGGGAGAAGAGA+TGG | + | chr2_4:4925172-4925191 | Msa0310060:CDS | 50.0% | |
TCCTCCCAGAACTGAAAGCA+AGG | + | chr2_4:4926789-4926808 | Msa0310060:CDS | 50.0% | |
!! | ACCTTGCTTTCAGTTCTGGG+AGG | - | chr2_4:4926793-4926812 | None:intergenic | 50.0% |
GGCACCTTGCTTTCAGTTCT+GGG | - | chr2_4:4926796-4926815 | None:intergenic | 50.0% | |
! | ACTGAAAGCAAGGTGCCCTA+AGG | + | chr2_4:4926799-4926818 | Msa0310060:CDS | 50.0% |
! | AAAGCAAGGTGCCCTAAGGA+TGG | + | chr2_4:4926803-4926822 | Msa0310060:CDS | 50.0% |
CAGATCACTCCCTTCATCCA+TGG | - | chr2_4:4926849-4926868 | None:intergenic | 50.0% | |
CCTGAGAAGAACAGCAGCCA+TGG | - | chr2_4:4924677-4924696 | None:intergenic | 55.0% | |
CCATGGCTGCTGTTCTTCTC+AGG | + | chr2_4:4924674-4924693 | Msa0310060:CDS | 55.0% | |
!! | GGAAGCATCTTGTCCAGGAG+TGG | + | chr2_4:4924916-4924935 | Msa0310060:CDS | 55.0% |
GGGCACCTTGCTTTCAGTTC+TGG | - | chr2_4:4926797-4926816 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 4924517 | 4927111 | 4924517 | ID=Msa0310060;Name=Msa0310060 |
chr2_4 | mRNA | 4924517 | 4927111 | 4924517 | ID=Msa0310060-mRNA-1;Parent=Msa0310060;Name=Msa0310060-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|4|0|312 |
chr2_4 | exon | 4924517 | 4924723 | 4924517 | ID=Msa0310060-mRNA-1:exon:1670;Parent=Msa0310060-mRNA-1 |
chr2_4 | exon | 4924806 | 4924988 | 4924806 | ID=Msa0310060-mRNA-1:exon:1671;Parent=Msa0310060-mRNA-1 |
chr2_4 | exon | 4925151 | 4925280 | 4925151 | ID=Msa0310060-mRNA-1:exon:1672;Parent=Msa0310060-mRNA-1 |
chr2_4 | exon | 4926693 | 4927111 | 4926693 | ID=Msa0310060-mRNA-1:exon:1673;Parent=Msa0310060-mRNA-1 |
chr2_4 | CDS | 4924517 | 4924723 | 4924517 | ID=Msa0310060-mRNA-1:cds;Parent=Msa0310060-mRNA-1 |
chr2_4 | CDS | 4924806 | 4924988 | 4924806 | ID=Msa0310060-mRNA-1:cds;Parent=Msa0310060-mRNA-1 |
chr2_4 | CDS | 4925151 | 4925280 | 4925151 | ID=Msa0310060-mRNA-1:cds;Parent=Msa0310060-mRNA-1 |
chr2_4 | CDS | 4926693 | 4927111 | 4926693 | ID=Msa0310060-mRNA-1:cds;Parent=Msa0310060-mRNA-1 |
Gene Sequence |
Protein sequence |