Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311100 | ABN05724.1 | 100.000 | 69 | 0 | 0 | 1 | 69 | 1 | 69 | 4.32e-39 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311100 | A2Q1A7 | 100.000 | 69 | 0 | 0 | 1 | 69 | 1 | 69 | 2.06e-39 | 133 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050730 | Msa0311100 | 0.805397 | 1.361374e-49 | -8.615850e-47 |
| Msa0050760 | Msa0311100 | 0.800758 | 1.240342e-48 | -8.615850e-47 |
| Msa0190360 | Msa0311100 | 0.918717 | 1.103524e-86 | -8.615850e-47 |
| Msa0272000 | Msa0311100 | 0.865480 | 5.728357e-65 | -8.615850e-47 |
| Msa0311100 | Msa0908170 | 0.805738 | 1.154607e-49 | -8.615850e-47 |
| Msa0311100 | Msa1404540 | 0.803651 | 3.149386e-49 | -8.615850e-47 |
| Msa0311100 | Msa1431060 | 0.800833 | 1.197063e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311100 | MtrunA17_Chr2g0279941 | 100.000 | 69 | 0 | 0 | 1 | 69 | 1 | 69 | 3.98e-43 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 32 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTCTGCCATATATATT+TGG | 0.170915 | 2_4:+5978304 | None:intergenic |
| ATATTCCACAACTTTAATAA+TGG | 0.294529 | 2_4:+5978241 | None:intergenic |
| TATACTCATACACATGCTTT+AGG | 0.317198 | 2_4:+5979156 | None:intergenic |
| AAAATATAACCAAATATATA+TGG | 0.338136 | 2_4:-5978313 | Msa0311100:three_prime_UTR |
| AAAGAAAAGGAAGATAATAA+AGG | 0.362142 | 2_4:+5978338 | None:intergenic |
| TACTCACTCATACAATTAAT+AGG | 0.364891 | 2_4:+5978424 | None:intergenic |
| AAGAAAAGGAAGATAATAAA+GGG | 0.377219 | 2_4:+5978339 | None:intergenic |
| ACCGGAGGTGGTCCTTGATA+AGG | 0.377579 | 2_4:+5978815 | None:intergenic |
| GCTAATGCATTTCACCAAAC+TGG | 0.387821 | 2_4:-5978520 | Msa0311100:exon |
| TATCATATAATATCAAATAT+TGG | 0.395323 | 2_4:+5978396 | None:intergenic |
| GAGATGAGTGAGATCAAATA+TGG | 0.409886 | 2_4:-5979044 | Msa0311100:CDS |
| TATGTACCTTGAGCAGGATA+TGG | 0.426594 | 2_4:+5979017 | None:intergenic |
| TTTGTGTTGCTGTTGCCTCT+TGG | 0.433493 | 2_4:-5978579 | Msa0311100:CDS |
| GGTGGTGCCGCCACCGGAGG+TGG | 0.452814 | 2_4:+5978803 | None:intergenic |
| CCGGAGGTGGTCCTTGATAA+GGG | 0.453222 | 2_4:+5978816 | None:intergenic |
| AGTACATTTATTATCTGAAA+GGG | 0.466301 | 2_4:-5978367 | Msa0311100:three_prime_UTR |
| CCCTTATCAAGGACCACCTC+CGG | 0.501946 | 2_4:-5978816 | Msa0311100:CDS |
| TTCATACTAGGCCCTTATCA+AGG | 0.506361 | 2_4:-5978827 | Msa0311100:intron |
| TCAAGGACCACCTCCGGTGG+CGG | 0.518251 | 2_4:-5978810 | Msa0311100:CDS |
| ATGGTGTATGTACCTTGAGC+AGG | 0.537878 | 2_4:+5979011 | None:intergenic |
| TGCGGTGGTGCCGCCACCGG+AGG | 0.538797 | 2_4:+5978800 | None:intergenic |
| TATTGCGGTGGTGCCGCCAC+CGG | 0.539716 | 2_4:+5978797 | None:intergenic |
| TAGTACATTTATTATCTGAA+AGG | 0.542095 | 2_4:-5978368 | Msa0311100:three_prime_UTR |
| GGCTATCCATATCCTGCTCA+AGG | 0.571306 | 2_4:-5979023 | Msa0311100:intron |
| TACCATCCCTCAAGAAAACC+CGG | 0.577880 | 2_4:+5978740 | None:intergenic |
| AACAGCAACACAAAGCTGCT+AGG | 0.601258 | 2_4:+5978588 | None:intergenic |
| AGAAAAGGAAGATAATAAAG+GGG | 0.613618 | 2_4:+5978340 | None:intergenic |
| TTATCAAGGACCACCTCCGG+TGG | 0.637488 | 2_4:-5978813 | Msa0311100:CDS |
| CACAGCAGCACTCATCCAAG+AGG | 0.685776 | 2_4:+5978564 | None:intergenic |
| GGAGCAGCATAGTATTGCGG+TGG | 0.697423 | 2_4:+5978785 | None:intergenic |
| GGTGGAGCAGCATAGTATTG+CGG | 0.699649 | 2_4:+5978782 | None:intergenic |
| GGAATATAGATACAATAACG+TGG | 0.751387 | 2_4:-5978225 | Msa0311100:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTCAAGAATAATTTT+AGG | - | chr2_4:5978293-5978312 | Msa0311100:three_prime_UTR | 10.0% |
| !! | TATCATATAATATCAAATAT+TGG | + | chr2_4:5978988-5979007 | None:intergenic | 10.0% |
| !! | AAAATATAACCAAATATATA+TGG | - | chr2_4:5979068-5979087 | Msa0311100:five_prime_UTR | 10.0% |
| !!! | TTTATTTCAAGAATAATTTT+AGG | - | chr2_4:5978293-5978312 | Msa0311100:three_prime_UTR | 10.0% |
| !! | TATCATATAATATCAAATAT+TGG | + | chr2_4:5978988-5979007 | None:intergenic | 10.0% |
| !! | AAAATATAACCAAATATATA+TGG | - | chr2_4:5979068-5979087 | Msa0311100:five_prime_UTR | 10.0% |
| !!! | AAGTTTTAGTATATAATTTG+AGG | + | chr2_4:5978414-5978433 | None:intergenic | 15.0% |
| !! | GTTTCAATATTGTAATAAAA+AGG | + | chr2_4:5978454-5978473 | None:intergenic | 15.0% |
| !! | AAAAAAAATACATTGTTTAG+TGG | - | chr2_4:5978928-5978947 | Msa0311100:intron | 15.0% |
| !!! | GGTTATATTTTTAAAAGAAA+AGG | + | chr2_4:5979059-5979078 | None:intergenic | 15.0% |
| !!! | AACTTTAATAATGGAAAAAA+TGG | + | chr2_4:5979134-5979153 | None:intergenic | 15.0% |
| !!! | AAGTTTTAGTATATAATTTG+AGG | + | chr2_4:5978414-5978433 | None:intergenic | 15.0% |
| !! | GTTTCAATATTGTAATAAAA+AGG | + | chr2_4:5978454-5978473 | None:intergenic | 15.0% |
| !! | AAAAAAAATACATTGTTTAG+TGG | - | chr2_4:5978928-5978947 | Msa0311100:intron | 15.0% |
| !!! | GGTTATATTTTTAAAAGAAA+AGG | + | chr2_4:5979059-5979078 | None:intergenic | 15.0% |
| !!! | AACTTTAATAATGGAAAAAA+TGG | + | chr2_4:5979134-5979153 | None:intergenic | 15.0% |
| !! | GAATGAGAAATATGTATATA+TGG | + | chr2_4:5978392-5978411 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATATTTCATACT+AGG | - | chr2_4:5978542-5978561 | Msa0311100:CDS | 20.0% |
| !! | TAAGCAATTATACACTATAT+AGG | - | chr2_4:5978662-5978681 | Msa0311100:intron | 20.0% |
| !! | AAGCAATTATACACTATATA+GGG | - | chr2_4:5978663-5978682 | Msa0311100:intron | 20.0% |
| !! | TAGTACATTTATTATCTGAA+AGG | - | chr2_4:5979013-5979032 | Msa0311100:intron | 20.0% |
| !! | AGTACATTTATTATCTGAAA+GGG | - | chr2_4:5979014-5979033 | Msa0311100:intron | 20.0% |
| !! | AAGAAAAGGAAGATAATAAA+GGG | + | chr2_4:5979045-5979064 | None:intergenic | 20.0% |
| !! | AAAGAAAAGGAAGATAATAA+AGG | + | chr2_4:5979046-5979065 | None:intergenic | 20.0% |
| !!! | TTTTTCCATTATTAAAGTTG+TGG | - | chr2_4:5979135-5979154 | Msa0311100:five_prime_UTR | 20.0% |
| !! | ATATTCCACAACTTTAATAA+TGG | + | chr2_4:5979143-5979162 | None:intergenic | 20.0% |
| !! | GAATGAGAAATATGTATATA+TGG | + | chr2_4:5978392-5978411 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATATTTCATACT+AGG | - | chr2_4:5978542-5978561 | Msa0311100:CDS | 20.0% |
| !! | TAAGCAATTATACACTATAT+AGG | - | chr2_4:5978662-5978681 | Msa0311100:intron | 20.0% |
| !! | AAGCAATTATACACTATATA+GGG | - | chr2_4:5978663-5978682 | Msa0311100:intron | 20.0% |
| !! | TAGTACATTTATTATCTGAA+AGG | - | chr2_4:5979013-5979032 | Msa0311100:intron | 20.0% |
| !! | AGTACATTTATTATCTGAAA+GGG | - | chr2_4:5979014-5979033 | Msa0311100:intron | 20.0% |
| !! | AAGAAAAGGAAGATAATAAA+GGG | + | chr2_4:5979045-5979064 | None:intergenic | 20.0% |
| !! | AAAGAAAAGGAAGATAATAA+AGG | + | chr2_4:5979046-5979065 | None:intergenic | 20.0% |
| !!! | TTTTTCCATTATTAAAGTTG+TGG | - | chr2_4:5979135-5979154 | Msa0311100:five_prime_UTR | 20.0% |
| !! | ATATTCCACAACTTTAATAA+TGG | + | chr2_4:5979143-5979162 | None:intergenic | 20.0% |
| !! | AAGAACTTGTAATTTTGTGT+TGG | + | chr2_4:5978274-5978293 | None:intergenic | 25.0% |
| ! | TACTCACTCATACAATTAAT+AGG | + | chr2_4:5978960-5978979 | None:intergenic | 25.0% |
| ! | AGAAAAGGAAGATAATAAAG+GGG | + | chr2_4:5979044-5979063 | None:intergenic | 25.0% |
| !! | AATAATGGAAAAAATGGAGA+GGG | + | chr2_4:5979128-5979147 | None:intergenic | 25.0% |
| !! | TAATAATGGAAAAAATGGAG+AGG | + | chr2_4:5979129-5979148 | None:intergenic | 25.0% |
| !! | AAGAACTTGTAATTTTGTGT+TGG | + | chr2_4:5978274-5978293 | None:intergenic | 25.0% |
| ! | TACTCACTCATACAATTAAT+AGG | + | chr2_4:5978960-5978979 | None:intergenic | 25.0% |
| ! | AGAAAAGGAAGATAATAAAG+GGG | + | chr2_4:5979044-5979063 | None:intergenic | 25.0% |
| !! | AATAATGGAAAAAATGGAGA+GGG | + | chr2_4:5979128-5979147 | None:intergenic | 25.0% |
| !! | TAATAATGGAAAAAATGGAG+AGG | + | chr2_4:5979129-5979148 | None:intergenic | 25.0% |
| TATACTCATACACATGCTTT+AGG | + | chr2_4:5978228-5978247 | None:intergenic | 30.0% | |
| ! | TAATTTTGTGTTGGAATGCA+GGG | + | chr2_4:5978265-5978284 | None:intergenic | 30.0% |
| CAATTATACACTATATAGGG+TGG | - | chr2_4:5978666-5978685 | Msa0311100:intron | 30.0% | |
| AGCTCGCAAAAATAATAGTT+GGG | + | chr2_4:5978844-5978863 | None:intergenic | 30.0% | |
| TAGCTCGCAAAAATAATAGT+TGG | + | chr2_4:5978845-5978864 | None:intergenic | 30.0% | |
| AGCTTTCTGCCATATATATT+TGG | + | chr2_4:5979080-5979099 | None:intergenic | 30.0% | |
| AAAATGGAGAGGGTAAAAAA+TGG | + | chr2_4:5979118-5979137 | None:intergenic | 30.0% | |
| GGAATATAGATACAATAACG+TGG | - | chr2_4:5979156-5979175 | Msa0311100:five_prime_UTR | 30.0% | |
| TATACTCATACACATGCTTT+AGG | + | chr2_4:5978228-5978247 | None:intergenic | 30.0% | |
| ! | TAATTTTGTGTTGGAATGCA+GGG | + | chr2_4:5978265-5978284 | None:intergenic | 30.0% |
| CAATTATACACTATATAGGG+TGG | - | chr2_4:5978666-5978685 | Msa0311100:intron | 30.0% | |
| AGCTCGCAAAAATAATAGTT+GGG | + | chr2_4:5978844-5978863 | None:intergenic | 30.0% | |
| TAGCTCGCAAAAATAATAGT+TGG | + | chr2_4:5978845-5978864 | None:intergenic | 30.0% | |
| AGCTTTCTGCCATATATATT+TGG | + | chr2_4:5979080-5979099 | None:intergenic | 30.0% | |
| AAAATGGAGAGGGTAAAAAA+TGG | + | chr2_4:5979118-5979137 | None:intergenic | 30.0% | |
| ! | GTAATTTTGTGTTGGAATGC+AGG | + | chr2_4:5978266-5978285 | None:intergenic | 35.0% |
| GAGATGAGTGAGATCAAATA+TGG | - | chr2_4:5978337-5978356 | Msa0311100:three_prime_UTR | 35.0% | |
| ! | CAATAGCTTCTTTTCCAGTT+TGG | + | chr2_4:5978878-5978897 | None:intergenic | 35.0% |
| ! | GTAATTTTGTGTTGGAATGC+AGG | + | chr2_4:5978266-5978285 | None:intergenic | 35.0% |
| GAGATGAGTGAGATCAAATA+TGG | - | chr2_4:5978337-5978356 | Msa0311100:three_prime_UTR | 35.0% | |
| ! | CAATAGCTTCTTTTCCAGTT+TGG | + | chr2_4:5978878-5978897 | None:intergenic | 35.0% |
| TATGTACCTTGAGCAGGATA+TGG | + | chr2_4:5978367-5978386 | None:intergenic | 40.0% | |
| TTCATACTAGGCCCTTATCA+AGG | - | chr2_4:5978554-5978573 | Msa0311100:CDS | 40.0% | |
| GCTAATGCATTTCACCAAAC+TGG | - | chr2_4:5978861-5978880 | Msa0311100:intron | 40.0% | |
| TATGTACCTTGAGCAGGATA+TGG | + | chr2_4:5978367-5978386 | None:intergenic | 40.0% | |
| TTCATACTAGGCCCTTATCA+AGG | - | chr2_4:5978554-5978573 | Msa0311100:CDS | 40.0% | |
| GCTAATGCATTTCACCAAAC+TGG | - | chr2_4:5978861-5978880 | Msa0311100:intron | 40.0% | |
| ATGGTGTATGTACCTTGAGC+AGG | + | chr2_4:5978373-5978392 | None:intergenic | 45.0% | |
| ! | AGAAAACCCGGCTCTCTTTT+TGG | + | chr2_4:5978632-5978651 | None:intergenic | 45.0% |
| TACCATCCCTCAAGAAAACC+CGG | + | chr2_4:5978644-5978663 | None:intergenic | 45.0% | |
| GCTGCTAGGCTGCATATAAT+TGG | + | chr2_4:5978782-5978801 | None:intergenic | 45.0% | |
| AACAGCAACACAAAGCTGCT+AGG | + | chr2_4:5978796-5978815 | None:intergenic | 45.0% | |
| ! | TTTGTGTTGCTGTTGCCTCT+TGG | - | chr2_4:5978802-5978821 | Msa0311100:CDS | 45.0% |
| ATGGTGTATGTACCTTGAGC+AGG | + | chr2_4:5978373-5978392 | None:intergenic | 45.0% | |
| ! | AGAAAACCCGGCTCTCTTTT+TGG | + | chr2_4:5978632-5978651 | None:intergenic | 45.0% |
| TACCATCCCTCAAGAAAACC+CGG | + | chr2_4:5978644-5978663 | None:intergenic | 45.0% | |
| GCTGCTAGGCTGCATATAAT+TGG | + | chr2_4:5978782-5978801 | None:intergenic | 45.0% | |
| AACAGCAACACAAAGCTGCT+AGG | + | chr2_4:5978796-5978815 | None:intergenic | 45.0% | |
| ! | TTTGTGTTGCTGTTGCCTCT+TGG | - | chr2_4:5978802-5978821 | Msa0311100:CDS | 45.0% |
| GGCTATCCATATCCTGCTCA+AGG | - | chr2_4:5978358-5978377 | Msa0311100:three_prime_UTR | 50.0% | |
| GGTGGAGCAGCATAGTATTG+CGG | + | chr2_4:5978602-5978621 | None:intergenic | 50.0% | |
| !!! | TCTCTTTTTGGTGGTGGTGG+TGG | + | chr2_4:5978620-5978639 | None:intergenic | 50.0% |
| ACCACCACCAAAAAGAGAGC+CGG | - | chr2_4:5978622-5978641 | Msa0311100:intron | 50.0% | |
| ! | AAACCCGGCTCTCTTTTTGG+TGG | + | chr2_4:5978629-5978648 | None:intergenic | 50.0% |
| ! | AAGAGAGCCGGGTTTTCTTG+AGG | - | chr2_4:5978634-5978653 | Msa0311100:intron | 50.0% |
| ! | AGAGAGCCGGGTTTTCTTGA+GGG | - | chr2_4:5978635-5978654 | Msa0311100:intron | 50.0% |
| GGCTATCCATATCCTGCTCA+AGG | - | chr2_4:5978358-5978377 | Msa0311100:three_prime_UTR | 50.0% | |
| GGTGGAGCAGCATAGTATTG+CGG | + | chr2_4:5978602-5978621 | None:intergenic | 50.0% | |
| !!! | TCTCTTTTTGGTGGTGGTGG+TGG | + | chr2_4:5978620-5978639 | None:intergenic | 50.0% |
| ACCACCACCAAAAAGAGAGC+CGG | - | chr2_4:5978622-5978641 | Msa0311100:intron | 50.0% | |
| ! | AAACCCGGCTCTCTTTTTGG+TGG | + | chr2_4:5978629-5978648 | None:intergenic | 50.0% |
| ! | AAGAGAGCCGGGTTTTCTTG+AGG | - | chr2_4:5978634-5978653 | Msa0311100:intron | 50.0% |
| ! | AGAGAGCCGGGTTTTCTTGA+GGG | - | chr2_4:5978635-5978654 | Msa0311100:intron | 50.0% |
| CCGGAGGTGGTCCTTGATAA+GGG | + | chr2_4:5978568-5978587 | None:intergenic | 55.0% | |
| CCCTTATCAAGGACCACCTC+CGG | - | chr2_4:5978565-5978584 | Msa0311100:CDS | 55.0% | |
| ACCGGAGGTGGTCCTTGATA+AGG | + | chr2_4:5978569-5978588 | None:intergenic | 55.0% | |
| TTATCAAGGACCACCTCCGG+TGG | - | chr2_4:5978568-5978587 | Msa0311100:CDS | 55.0% | |
| GGAGCAGCATAGTATTGCGG+TGG | + | chr2_4:5978599-5978618 | None:intergenic | 55.0% | |
| !!! | GGCTCTCTTTTTGGTGGTGG+TGG | + | chr2_4:5978623-5978642 | None:intergenic | 55.0% |
| CCACCACCAAAAAGAGAGCC+GGG | - | chr2_4:5978623-5978642 | Msa0311100:intron | 55.0% | |
| ! | AGCCGGGTTTTCTTGAGGGA+TGG | - | chr2_4:5978639-5978658 | Msa0311100:intron | 55.0% |
| CACAGCAGCACTCATCCAAG+AGG | + | chr2_4:5978820-5978839 | None:intergenic | 55.0% | |
| CCGGAGGTGGTCCTTGATAA+GGG | + | chr2_4:5978568-5978587 | None:intergenic | 55.0% | |
| CCCTTATCAAGGACCACCTC+CGG | - | chr2_4:5978565-5978584 | Msa0311100:CDS | 55.0% | |
| ACCGGAGGTGGTCCTTGATA+AGG | + | chr2_4:5978569-5978588 | None:intergenic | 55.0% | |
| TTATCAAGGACCACCTCCGG+TGG | - | chr2_4:5978568-5978587 | Msa0311100:CDS | 55.0% | |
| GGAGCAGCATAGTATTGCGG+TGG | + | chr2_4:5978599-5978618 | None:intergenic | 55.0% | |
| !!! | GGCTCTCTTTTTGGTGGTGG+TGG | + | chr2_4:5978623-5978642 | None:intergenic | 55.0% |
| CCACCACCAAAAAGAGAGCC+GGG | - | chr2_4:5978623-5978642 | Msa0311100:intron | 55.0% | |
| ! | AGCCGGGTTTTCTTGAGGGA+TGG | - | chr2_4:5978639-5978658 | Msa0311100:intron | 55.0% |
| CACAGCAGCACTCATCCAAG+AGG | + | chr2_4:5978820-5978839 | None:intergenic | 55.0% | |
| !! | CCCGGCTCTCTTTTTGGTGG+TGG | + | chr2_4:5978626-5978645 | None:intergenic | 60.0% |
| !! | CCCGGCTCTCTTTTTGGTGG+TGG | + | chr2_4:5978626-5978645 | None:intergenic | 60.0% |
| TCAAGGACCACCTCCGGTGG+CGG | - | chr2_4:5978571-5978590 | Msa0311100:CDS | 65.0% | |
| !! | TATTGCGGTGGTGCCGCCAC+CGG | + | chr2_4:5978587-5978606 | None:intergenic | 65.0% |
| TCAAGGACCACCTCCGGTGG+CGG | - | chr2_4:5978571-5978590 | Msa0311100:CDS | 65.0% | |
| !! | TATTGCGGTGGTGCCGCCAC+CGG | + | chr2_4:5978587-5978606 | None:intergenic | 65.0% |
| !!! | GGTGGTGCCGCCACCGGAGG+TGG | + | chr2_4:5978581-5978600 | None:intergenic | 80.0% |
| !!! | TGCGGTGGTGCCGCCACCGG+AGG | + | chr2_4:5978584-5978603 | None:intergenic | 80.0% |
| !!! | GGTGGTGCCGCCACCGGAGG+TGG | + | chr2_4:5978581-5978600 | None:intergenic | 80.0% |
| !!! | TGCGGTGGTGCCGCCACCGG+AGG | + | chr2_4:5978584-5978603 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 5978225 | 5979178 | 5978225 | ID=Msa0311100;Name=Msa0311100 |
| chr2_4 | mRNA | 5978225 | 5979178 | 5978225 | ID=Msa0311100-mRNA-1;Parent=Msa0311100;Name=Msa0311100-mRNA-1;_AED=0.00;_eAED=0.00;_QI=115|1|1|1|1|1|3|313|69 |
| chr2_4 | exon | 5978225 | 5978610 | 5978225 | ID=Msa0311100-mRNA-1:exon:2254;Parent=Msa0311100-mRNA-1 |
| chr2_4 | exon | 5978743 | 5978839 | 5978743 | ID=Msa0311100-mRNA-1:exon:2253;Parent=Msa0311100-mRNA-1 |
| chr2_4 | exon | 5979024 | 5979178 | 5979024 | ID=Msa0311100-mRNA-1:exon:2252;Parent=Msa0311100-mRNA-1 |
| chr2_4 | five_prime_UTR | 5979064 | 5979178 | 5979064 | ID=Msa0311100-mRNA-1:five_prime_utr;Parent=Msa0311100-mRNA-1 |
| chr2_4 | CDS | 5979024 | 5979063 | 5979024 | ID=Msa0311100-mRNA-1:cds;Parent=Msa0311100-mRNA-1 |
| chr2_4 | CDS | 5978743 | 5978839 | 5978743 | ID=Msa0311100-mRNA-1:cds;Parent=Msa0311100-mRNA-1 |
| chr2_4 | CDS | 5978538 | 5978610 | 5978538 | ID=Msa0311100-mRNA-1:cds;Parent=Msa0311100-mRNA-1 |
| chr2_4 | three_prime_UTR | 5978225 | 5978537 | 5978225 | ID=Msa0311100-mRNA-1:three_prime_utr;Parent=Msa0311100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
