Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314370 | XP_003593800.1 | 99.293 | 566 | 4 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314370 | sp|Q9C7N2|CAD1_ARATH | 74.120 | 568 | 136 | 2 | 3 | 566 | 1 | 561 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0274200 | Msa0314370 | 0.975549 | 3.711118e-140 | -8.615850e-47 |
| Msa0314370 | Msa1087310 | 0.977713 | 2.473310e-144 | -8.615850e-47 |
| Msa0314370 | Msa1111770 | 0.804275 | 2.335461e-49 | -8.615850e-47 |
| Msa0314370 | Msa1439370 | 0.979069 | 3.635585e-147 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314370 | MtrunA17_Chr2g0284691 | 99.293 | 566 | 4 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1168 |
| Msa0314370 | MtrunA17_Chr4g0013011 | 60.381 | 578 | 197 | 4 | 18 | 566 | 10 | 584 | 0.0 | 722 |
| Msa0314370 | MtrunA17_Chr2g0277061 | 43.697 | 595 | 269 | 11 | 22 | 565 | 15 | 594 | 9.95e-155 | 456 |
| Msa0314370 | MtrunA17_Chr8g0377631 | 39.251 | 614 | 298 | 9 | 22 | 566 | 11 | 618 | 3.19e-139 | 417 |
| Msa0314370 | MtrunA17_Chr8g0385121 | 39.835 | 605 | 295 | 11 | 11 | 564 | 2 | 588 | 2.61e-133 | 401 |
| Msa0314370 | MtrunA17_Chr3g0122211 | 38.736 | 617 | 292 | 13 | 22 | 566 | 17 | 619 | 2.71e-132 | 399 |
| Msa0314370 | MtrunA17_Chr8g0391931 | 40.772 | 596 | 286 | 15 | 22 | 565 | 9 | 589 | 1.76e-131 | 396 |
| Msa0314370 | MtrunA17_Chr4g0046841 | 38.907 | 604 | 291 | 12 | 22 | 564 | 25 | 611 | 4.96e-131 | 396 |
| Msa0314370 | MtrunA17_Chr8g0385131 | 37.786 | 569 | 312 | 10 | 22 | 566 | 16 | 566 | 7.32e-120 | 365 |
| Msa0314370 | MtrunA17_Chr8g0385181 | 39.464 | 560 | 302 | 13 | 22 | 566 | 16 | 553 | 1.41e-118 | 362 |
| Msa0314370 | MtrunA17_Chr8g0385171 | 36.120 | 299 | 179 | 7 | 6 | 301 | 2 | 291 | 4.88e-51 | 177 |
| Msa0314370 | MtrunA17_Chr8g0385161 | 36.090 | 266 | 144 | 5 | 305 | 566 | 1 | 244 | 2.71e-40 | 147 |
| Msa0314370 | MtrunA17_Chr7g0274871 | 37.241 | 145 | 80 | 4 | 22 | 163 | 130 | 266 | 4.08e-19 | 87.8 |
| Msa0314370 | MtrunA17_Chr8g0385141 | 37.037 | 108 | 67 | 1 | 127 | 233 | 13 | 120 | 3.21e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314370 | AT1G29690.1 | 74.120 | 568 | 136 | 2 | 3 | 566 | 1 | 561 | 0.0 | 865 |
| Msa0314370 | AT4G24290.2 | 42.088 | 594 | 277 | 11 | 22 | 564 | 14 | 591 | 4.82e-146 | 434 |
| Msa0314370 | AT4G24290.3 | 42.088 | 594 | 277 | 11 | 22 | 564 | 14 | 591 | 4.82e-146 | 434 |
| Msa0314370 | AT1G28380.1 | 39.866 | 597 | 296 | 11 | 22 | 565 | 18 | 604 | 8.41e-134 | 403 |
| Msa0314370 | AT1G14780.1 | 39.060 | 617 | 300 | 12 | 19 | 565 | 9 | 619 | 2.39e-130 | 395 |
| Msa0314370 | AT4G24290.1 | 37.771 | 323 | 171 | 4 | 22 | 314 | 14 | 336 | 6.29e-67 | 221 |
Find 163 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCCCAAACTCGAGTTATT+TGG | 0.151329 | 2_4:+10104673 | None:intergenic |
| TAAATTAACAAAACAAAATT+TGG | 0.151958 | 2_4:-10107113 | Msa0314370:CDS |
| GGTTCTGTTTGTTGCCTTCT+AGG | 0.176268 | 2_4:+10103819 | None:intergenic |
| ATCTCTTCAGTTCAGCTTAA+TGG | 0.199416 | 2_4:-10104610 | Msa0314370:CDS |
| GAGATTGAGAAGAAAATAAA+TGG | 0.207046 | 2_4:+10109595 | None:intergenic |
| TTCTCTATAACAAATGATTA+TGG | 0.217043 | 2_4:-10109546 | Msa0314370:exon |
| TTGAGCAAAGTCATATTAAA+TGG | 0.226890 | 2_4:-10105277 | Msa0314370:CDS |
| CCTGGTCATTGGTTAGTTAC+AGG | 0.228325 | 2_4:-10103305 | Msa0314370:CDS |
| TCCTCCGGACCTTGCCATTT+GGG | 0.244585 | 2_4:+10103713 | None:intergenic |
| CTCCTCCGGACCTTGCCATT+TGG | 0.248166 | 2_4:+10103712 | None:intergenic |
| TGTTGTTCCTAATGTTTCTT+TGG | 0.249610 | 2_4:-10109336 | Msa0314370:CDS |
| TTGATGTTACATCAGATATT+AGG | 0.264623 | 2_4:-10109445 | Msa0314370:CDS |
| TGAAGACCTACAGTATTTCT+TGG | 0.272397 | 2_4:-10104700 | Msa0314370:CDS |
| GAAAACCACTGACGAGAAAA+AGG | 0.281289 | 2_4:-10103405 | Msa0314370:CDS |
| CTGTTGCAGATGTAACAATA+TGG | 0.285114 | 2_4:+10105972 | None:intergenic |
| CTGGGGCCCAACTCGGCGTT+TGG | 0.286242 | 2_4:-10103574 | Msa0314370:CDS |
| AGTACATGGCGTAAAGCTTT+TGG | 0.287935 | 2_4:-10105183 | Msa0314370:CDS |
| ATGGGTGGAAACTGTAAAAT+TGG | 0.302934 | 2_4:-10105258 | Msa0314370:CDS |
| ATTTCCAAATAACTCGAGTT+TGG | 0.307852 | 2_4:-10104677 | Msa0314370:CDS |
| TTAGGCTTCTTTACTGTAAA+GGG | 0.308131 | 2_4:-10109427 | Msa0314370:CDS |
| TCTCTTCAGTTCAGCTTAAT+GGG | 0.316945 | 2_4:-10104609 | Msa0314370:CDS |
| GGCGCGCTGTTCCTTACTCT+TGG | 0.323349 | 2_4:-10107072 | Msa0314370:CDS |
| TTGCAACTCAATCCAAGCTT+TGG | 0.330570 | 2_4:-10109477 | Msa0314370:CDS |
| ATCTCGATGAGGAACATAAT+AGG | 0.337585 | 2_4:-10109382 | Msa0314370:CDS |
| GTTAATTTAACTTCGAATAG+TGG | 0.352885 | 2_4:+10107127 | None:intergenic |
| TCTGGTGTTCATATTGTCAC+TGG | 0.361807 | 2_4:-10103593 | Msa0314370:CDS |
| CTCTTGGGATCCAGCATCCT+TGG | 0.364296 | 2_4:-10107056 | Msa0314370:CDS |
| CAACTTCACTGGCTCTTCAA+TGG | 0.371767 | 2_4:-10107197 | Msa0314370:CDS |
| TTAAGGACATTGAAAATGAT+AGG | 0.374657 | 2_4:-10105874 | Msa0314370:CDS |
| GCTAAGCTTGGAGTAGAAAA+AGG | 0.376859 | 2_4:-10103281 | Msa0314370:CDS |
| TGCAACTCAATCCAAGCTTT+GGG | 0.377483 | 2_4:-10109476 | Msa0314370:CDS |
| CAATCGGTGCAGTGCTTACA+TGG | 0.380427 | 2_4:+10103645 | None:intergenic |
| CAACGGCTGTCTTGCTCCTC+CGG | 0.382643 | 2_4:+10103698 | None:intergenic |
| TTTCCAAATAACTCGAGTTT+GGG | 0.387219 | 2_4:-10104676 | Msa0314370:CDS |
| CCCATCGTTTCTCTTCTTGA+AGG | 0.389904 | 2_4:-10105206 | Msa0314370:CDS |
| CTGGTCATTGGTTAGTTACA+GGG | 0.399984 | 2_4:-10103304 | Msa0314370:CDS |
| CTGGTGTTCATATTGTCACT+GGG | 0.402777 | 2_4:-10103592 | Msa0314370:CDS |
| AATTCTATGTTCAACTTCAC+TGG | 0.404887 | 2_4:-10107208 | Msa0314370:CDS |
| CTTTACTGTAAAGGGGCACC+TGG | 0.405239 | 2_4:-10109419 | Msa0314370:CDS |
| CGCAAGATATTCCTGGTCAT+TGG | 0.407797 | 2_4:-10103316 | Msa0314370:CDS |
| AACTGAAGAGATTGACAAAC+AGG | 0.408326 | 2_4:+10104621 | None:intergenic |
| AGTTGAATTGTTGAATGAAT+AGG | 0.414435 | 2_4:+10109623 | None:intergenic |
| TTAGGAAACAATACCTGATC+TGG | 0.416102 | 2_4:+10104567 | None:intergenic |
| TCAATATCCAAAGAAACATT+AGG | 0.416962 | 2_4:+10109329 | None:intergenic |
| GGCTATTGTTTCTAGTGTGA+AGG | 0.418357 | 2_4:+10103173 | None:intergenic |
| TCTCGATGAGGAACATAATA+GGG | 0.419000 | 2_4:-10109381 | Msa0314370:CDS |
| AATGAAAGGTCAGGCATAGA+AGG | 0.419511 | 2_4:-10107253 | Msa0314370:CDS |
| TGGGGCCCAACTCGGCGTTT+GGG | 0.421506 | 2_4:-10103573 | Msa0314370:CDS |
| ATTAGGCTTCTTTACTGTAA+AGG | 0.421799 | 2_4:-10109428 | Msa0314370:CDS |
| GCAGAGACGTCGTGTATATT+AGG | 0.422089 | 2_4:-10105943 | Msa0314370:CDS |
| TTGCCATTTGGGAGCACCTA+TGG | 0.423342 | 2_4:+10103724 | None:intergenic |
| GCGCGCTGTTCCTTACTCTT+GGG | 0.436346 | 2_4:-10107071 | Msa0314370:CDS |
| CAACTCGGCGTTTGGGACTT+CGG | 0.437523 | 2_4:-10103566 | Msa0314370:CDS |
| GCGCCTGACTTCATCATTCA+AGG | 0.443883 | 2_4:+10107090 | None:intergenic |
| TCAATCCAAGCTTTGGGTCG+TGG | 0.444195 | 2_4:-10109470 | Msa0314370:CDS |
| AAATACTGTAGGTCTTCAAT+AGG | 0.446642 | 2_4:+10104705 | None:intergenic |
| TTGGTTTCAGTTATCTCAAT+CGG | 0.449176 | 2_4:+10103629 | None:intergenic |
| GAAGTCCCAAACGCCGAGTT+GGG | 0.450928 | 2_4:+10103568 | None:intergenic |
| GGACTAAGGCTGAGCCTAGA+AGG | 0.451984 | 2_4:-10103833 | Msa0314370:CDS |
| AGATAACTGAAACCAACATT+GGG | 0.454313 | 2_4:-10103622 | Msa0314370:CDS |
| AACCATGGCAAGTGATTTAG+TGG | 0.455369 | 2_4:+10107162 | None:intergenic |
| TTGGATATTGATTTCTCTCG+TGG | 0.455732 | 2_4:-10109317 | Msa0314370:CDS |
| AACTTCATGTTAATAATGTC+TGG | 0.460930 | 2_4:+10105233 | None:intergenic |
| TGTGCAGCTGCCGGAGTGGA+AGG | 0.461283 | 2_4:+10103461 | None:intergenic |
| GTAAAGGGGCACCTGGGTCT+AGG | 0.461302 | 2_4:-10109412 | Msa0314370:CDS |
| GCTTACCTAGCCAAGGATGC+TGG | 0.461481 | 2_4:+10107046 | None:intergenic |
| GACATGACAGAAATGTCAAA+AGG | 0.463117 | 2_4:-10103341 | Msa0314370:CDS |
| CTTTGTAGATTATTCTGCTC+CGG | 0.465985 | 2_4:+10104651 | None:intergenic |
| GTTGGTTTGAACCGATCAAA+TGG | 0.470890 | 2_4:-10103679 | Msa0314370:CDS |
| ACCAACATTGGGGACCTCTC+TGG | 0.475602 | 2_4:-10103611 | Msa0314370:CDS |
| AAAGGGCCGCAAGATATTCC+TGG | 0.476025 | 2_4:-10103323 | Msa0314370:CDS |
| TGGCCTTGAATGATGAAGTC+AGG | 0.476306 | 2_4:-10107093 | Msa0314370:CDS |
| ACCTTGTTGAAGTAGCTGTT+TGG | 0.478004 | 2_4:+10109650 | None:intergenic |
| TTCTAGGCTCAGCCTTAGTC+CGG | 0.478380 | 2_4:+10103835 | None:intergenic |
| GCAGAATAATCTACAAAGAA+AGG | 0.478534 | 2_4:-10104646 | Msa0314370:CDS |
| AGATTGAGAAGAAAATAAAT+GGG | 0.480489 | 2_4:+10109596 | None:intergenic |
| ATCATCTTCTTTGTCTGCAC+CGG | 0.487290 | 2_4:-10105912 | Msa0314370:CDS |
| TGCTCCCAAATGGCAAGGTC+CGG | 0.489992 | 2_4:-10103717 | Msa0314370:CDS |
| TGAGCAAAGTCATATTAAAT+GGG | 0.490628 | 2_4:-10105276 | Msa0314370:CDS |
| GGACATTGAGAACTATGTTA+AGG | 0.491242 | 2_4:-10105891 | Msa0314370:CDS |
| GCAAGCCTGTGACCGGACTA+AGG | 0.492394 | 2_4:-10103847 | Msa0314370:CDS |
| CAAAACCACGACCCAAAGCT+TGG | 0.494144 | 2_4:+10109465 | None:intergenic |
| TCTCTTCTTGAAGGAGTACA+TGG | 0.494167 | 2_4:-10105197 | Msa0314370:CDS |
| TAGCCAAGCATTCTTTGCAC+AGG | 0.494522 | 2_4:-10103155 | Msa0314370:three_prime_UTR |
| TGGCCATAGGTGCTCCCAAA+TGG | 0.497053 | 2_4:-10103727 | Msa0314370:CDS |
| TTAACATAGTTCTCAATGTC+CGG | 0.499086 | 2_4:+10105893 | None:intergenic |
| GTGCAGACAAAGAAGATGAT+TGG | 0.502238 | 2_4:+10105915 | None:intergenic |
| TTAGTTACAGGGGCTAAGCT+TGG | 0.503082 | 2_4:-10103293 | Msa0314370:CDS |
| TTCCCTGTGCAAAGAATGCT+TGG | 0.503602 | 2_4:+10103152 | None:intergenic |
| ATTGTCACTGGGGCCCAACT+CGG | 0.508327 | 2_4:-10103581 | Msa0314370:CDS |
| GAATATTTCAATGAAAGGTC+AGG | 0.511169 | 2_4:-10107262 | Msa0314370:CDS |
| CGAAGTCCCAAACGCCGAGT+TGG | 0.513349 | 2_4:+10103567 | None:intergenic |
| ATGAGCATAGTGACATTATG+AGG | 0.517711 | 2_4:-10103008 | Msa0314370:three_prime_UTR |
| TGGAAAACTCGCGAAAATTG+TGG | 0.518519 | 2_4:-10103363 | Msa0314370:CDS |
| GCTATTGTTTCTAGTGTGAA+GGG | 0.519979 | 2_4:+10103174 | None:intergenic |
| TCTGATTTGTGTGCAGCTGC+CGG | 0.524876 | 2_4:+10103452 | None:intergenic |
| TGGATATTGATTTCTCTCGT+GGG | 0.526335 | 2_4:-10109316 | Msa0314370:CDS |
| TGTTGCAGATGTAACAATAT+GGG | 0.528350 | 2_4:+10105973 | None:intergenic |
| CTCTTTGTACTTCAAAGCAG+CGG | 0.529325 | 2_4:+10105823 | None:intergenic |
| GAGAAGTTCTTCCATTTGAT+CGG | 0.529495 | 2_4:+10103668 | None:intergenic |
| GAGATAACTGAAACCAACAT+TGG | 0.530726 | 2_4:-10103623 | Msa0314370:CDS |
| CTCAGCCTTAGTCCGGTCAC+AGG | 0.530834 | 2_4:+10103842 | None:intergenic |
| ACCACATTGGGATGCACACA+TGG | 0.534167 | 2_4:-10103747 | Msa0314370:CDS |
| GTGCATCCCAATGTGGTTGG+AGG | 0.535892 | 2_4:+10103753 | None:intergenic |
| GATGCTGGATCCCAAGAGTA+AGG | 0.536433 | 2_4:+10107061 | None:intergenic |
| TGGCAGAATATTTCAATGAA+AGG | 0.536564 | 2_4:-10107267 | Msa0314370:CDS |
| GTTACATCTGCAACAGTTGG+TGG | 0.540314 | 2_4:-10105965 | Msa0314370:CDS |
| ACTAAATCACTTGCCATGGT+TGG | 0.541025 | 2_4:-10107160 | Msa0314370:CDS |
| TACTGTAGGTCTTCAATAGG+AGG | 0.541171 | 2_4:+10104708 | None:intergenic |
| GATTTCTCTCGTGGGAAAAG+TGG | 0.542981 | 2_4:-10109308 | Msa0314370:CDS |
| ACCAGAGAGGTCCCCAATGT+TGG | 0.547567 | 2_4:+10103610 | None:intergenic |
| GTTGGACGCAAGCCTGTGAC+CGG | 0.554152 | 2_4:-10103854 | Msa0314370:CDS |
| TTTAGTTGATGGTGATGCAA+TGG | 0.556791 | 2_4:-10103081 | Msa0314370:three_prime_UTR |
| TCTTTGTACTTCAAAGCAGC+GGG | 0.557262 | 2_4:+10105824 | None:intergenic |
| GGGATCCAGCATCCTTGGCT+AGG | 0.559891 | 2_4:-10107051 | Msa0314370:intron |
| AGACGGTGCTTCGTCATCAT+CGG | 0.560891 | 2_4:-10103432 | Msa0314370:CDS |
| TGTGTGCATCCCAATGTGGT+TGG | 0.562576 | 2_4:+10103750 | None:intergenic |
| TGGTCATTGGTTAGTTACAG+GGG | 0.562808 | 2_4:-10103303 | Msa0314370:CDS |
| ATTTGATCGGTTCAAACCAA+CGG | 0.563797 | 2_4:+10103681 | None:intergenic |
| TGGGATGCACACATGGCCAT+AGG | 0.574386 | 2_4:-10103740 | Msa0314370:CDS |
| CGGAGGAGCAAGACAGCCGT+TGG | 0.574725 | 2_4:-10103697 | Msa0314370:CDS |
| CCTTAGAGAAAAGTAGTTTG+AGG | 0.575804 | 2_4:+10103525 | None:intergenic |
| GAAGATAGTTCCGTCCACAT+TGG | 0.576959 | 2_4:-10103383 | Msa0314370:CDS |
| ACATGACAGAAATGTCAAAA+GGG | 0.578364 | 2_4:-10103340 | Msa0314370:CDS |
| AGCCACTAAATCACTTGCCA+TGG | 0.581549 | 2_4:-10107164 | Msa0314370:CDS |
| TTTACTGTAAAGGGGCACCT+GGG | 0.582513 | 2_4:-10109418 | Msa0314370:CDS |
| TGCTTTGAAGTACAAAGAGA+AGG | 0.585123 | 2_4:-10105819 | Msa0314370:intron |
| TCCCAAATGGCAAGGTCCGG+AGG | 0.587700 | 2_4:-10103714 | Msa0314370:CDS |
| AAAATTAGCTTACCTAGCCA+AGG | 0.588224 | 2_4:+10107039 | None:intergenic |
| CTATTGTTTCTAGTGTGAAG+GGG | 0.596042 | 2_4:+10103175 | None:intergenic |
| TAGGCTTCTTTACTGTAAAG+GGG | 0.596259 | 2_4:-10109426 | Msa0314370:CDS |
| ATTGTTACATCTGCAACAGT+TGG | 0.597254 | 2_4:-10105968 | Msa0314370:CDS |
| CACGATAAGACGGTCAGTGT+GGG | 0.598843 | 2_4:-10103492 | Msa0314370:CDS |
| TCCTTCAAGAAGAGAAACGA+TGG | 0.600405 | 2_4:+10105205 | None:intergenic |
| CCTGTAACTAACCAATGACC+AGG | 0.600926 | 2_4:+10103305 | None:intergenic |
| GCAAAGTCATATTAAATGGG+TGG | 0.601409 | 2_4:-10105273 | Msa0314370:CDS |
| AGCCAAGCATTCTTTGCACA+GGG | 0.606581 | 2_4:-10103154 | Msa0314370:three_prime_UTR |
| TATGAATCAATAGTTTAGCA+AGG | 0.610403 | 2_4:+10103232 | None:intergenic |
| TTGTCATCGCAGGTAACAGT+TGG | 0.611875 | 2_4:-10103872 | Msa0314370:intron |
| GACCGTCTTATCGTGCACCC+TGG | 0.616200 | 2_4:+10103500 | None:intergenic |
| GGAAATCCAAGAAATACTGT+AGG | 0.618343 | 2_4:+10104694 | None:intergenic |
| AATAACTCGAGTTTGGGCGC+CGG | 0.628765 | 2_4:-10104670 | Msa0314370:CDS |
| GAATTGTTGAATGAATAGGT+TGG | 0.635137 | 2_4:+10109627 | None:intergenic |
| GGATCATAACCCTTCCACTC+CGG | 0.636730 | 2_4:-10103471 | Msa0314370:CDS |
| GCACGATAAGACGGTCAGTG+TGG | 0.639402 | 2_4:-10103493 | Msa0314370:CDS |
| GTGCAGCTGCCGGAGTGGAA+GGG | 0.640888 | 2_4:+10103462 | None:intergenic |
| GCAGCTGCACACAAATCAGA+CGG | 0.644603 | 2_4:-10103449 | Msa0314370:CDS |
| ATAGGTGCTCCCAAATGGCA+AGG | 0.645874 | 2_4:-10103722 | Msa0314370:CDS |
| TACCAGGGTGCACGATAAGA+CGG | 0.647747 | 2_4:-10103502 | Msa0314370:CDS |
| AATCGGTGCAGTGCTTACAT+GGG | 0.651985 | 2_4:+10103646 | None:intergenic |
| TGGAATGAAATATCCAACCA+TGG | 0.654312 | 2_4:+10107147 | None:intergenic |
| CAATGACCAGGAATATCTTG+CGG | 0.654789 | 2_4:+10103317 | None:intergenic |
| ATAGAATTGAAGCTTCCAAG+TGG | 0.657356 | 2_4:+10107223 | None:intergenic |
| ACCAAACAGCTACTTCAACA+AGG | 0.661372 | 2_4:-10109651 | Msa0314370:five_prime_UTR |
| GCTGCAAATGAATTGCGAGT+CGG | 0.663551 | 2_4:+10103798 | None:intergenic |
| TTTGTGTGCAGCTGCCGGAG+TGG | 0.665993 | 2_4:+10103457 | None:intergenic |
| CCTTCAAGAAGAGAAACGAT+GGG | 0.671747 | 2_4:+10105206 | None:intergenic |
| GCCATGTGTGCATCCCAATG+TGG | 0.674737 | 2_4:+10103746 | None:intergenic |
| AGATGAACAAGCCTAGACCC+AGG | 0.692616 | 2_4:+10109401 | None:intergenic |
| TGGTGTTCATATTGTCACTG+GGG | 0.695069 | 2_4:-10103591 | Msa0314370:CDS |
| TAGGCTTGTTCATCTCGATG+AGG | 0.698566 | 2_4:-10109393 | Msa0314370:CDS |
| GATAACTGAAACCAACATTG+GGG | 0.738432 | 2_4:-10103621 | Msa0314370:CDS |
| TGACAATATGAACACCAGAG+AGG | 0.757497 | 2_4:+10103597 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATTTTATTGTGTA+TGG | - | chr2_4:10103597-10103616 | Msa0314370:CDS | 10.0% |
| !!! | AAATTTTTAAAAAAGCAATT+GGG | + | chr2_4:10105149-10105168 | None:intergenic | 10.0% |
| !!! | AAAATTTTTAAAAAAGCAAT+TGG | + | chr2_4:10105150-10105169 | None:intergenic | 10.0% |
| !! | TAAATTAACAAAACAAAATT+TGG | - | chr2_4:10105553-10105572 | Msa0314370:intron | 10.0% |
| !! | AAAAAAAAAACAAATTCAAA+GGG | + | chr2_4:10109470-10109489 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAACAAATTCAA+AGG | + | chr2_4:10109471-10109490 | None:intergenic | 10.0% |
| !!! | ATTAAATTTTGTTGATTTAA+TGG | - | chr2_4:10109632-10109651 | Msa0314370:five_prime_UTR | 10.0% |
| !! | TCCAATATAAAAAGTTAATA+TGG | - | chr2_4:10103826-10103845 | Msa0314370:CDS | 15.0% |
| !!! | ACCATATTAACTTTTTATAT+TGG | + | chr2_4:10103830-10103849 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAGGAATTTTAG+TGG | + | chr2_4:10105836-10105855 | None:intergenic | 15.0% |
| !! | AAAAAATAAGATTAAGAATC+TGG | + | chr2_4:10106358-10106377 | None:intergenic | 15.0% |
| !!! | AAAAGAGTTTTTTTTTTTTG+AGG | - | chr2_4:10106545-10106564 | Msa0314370:intron | 15.0% |
| !!! | AAAGAGTTTTTTTTTTTTGA+GGG | - | chr2_4:10106546-10106565 | Msa0314370:intron | 15.0% |
| !! | TACAAATTCATATAATAACT+GGG | + | chr2_4:10107759-10107778 | None:intergenic | 15.0% |
| !! | TGTTAAATATAGTAGAATTT+AGG | + | chr2_4:10108120-10108139 | None:intergenic | 15.0% |
| !! | AAATTCTACTATATTTAACA+TGG | - | chr2_4:10108120-10108139 | Msa0314370:intron | 15.0% |
| !!! | ATTACAAGTTTTATTTGAAT+TGG | - | chr2_4:10108325-10108344 | Msa0314370:intron | 15.0% |
| !!! | ATTTTTAGTTATTTAGTTGA+TGG | - | chr2_4:10109574-10109593 | Msa0314370:five_prime_UTR | 15.0% |
| !! | AGATTGAGAAGAAAATAAAT+GGG | + | chr2_4:10103073-10103092 | None:intergenic | 20.0% |
| !!! | CAAAAAAGTTCAGTTTTTTA+TGG | + | chr2_4:10103099-10103118 | None:intergenic | 20.0% |
| !! | TTCTCTATAACAAATGATTA+TGG | - | chr2_4:10103120-10103139 | Msa0314370:three_prime_UTR | 20.0% |
| !!! | TTATTTTATTGTGTATGGAT+TGG | - | chr2_4:10103602-10103621 | Msa0314370:CDS | 20.0% |
| !! | ATTAGATGAGATAATATGAA+TGG | - | chr2_4:10104109-10104128 | Msa0314370:intron | 20.0% |
| !!! | TTTTAGCATATTAATTCCTT+TGG | - | chr2_4:10104132-10104151 | Msa0314370:intron | 20.0% |
| !! | TTTAGCATATTAATTCCTTT+GGG | - | chr2_4:10104133-10104152 | Msa0314370:intron | 20.0% |
| !! | CTTCTTAAAATTACAAAACA+TGG | - | chr2_4:10104582-10104601 | Msa0314370:CDS | 20.0% |
| !!! | TTCAAATTTTATGTCAACAT+TGG | + | chr2_4:10104927-10104946 | None:intergenic | 20.0% |
| !!! | TGAACTTGTAAAAATGATTT+TGG | - | chr2_4:10104943-10104962 | Msa0314370:intron | 20.0% |
| !! | TGATTTCAAAACAAATAGAT+AGG | + | chr2_4:10104998-10105017 | None:intergenic | 20.0% |
| !! | TATATATCTTCAATCAAATG+AGG | + | chr2_4:10105315-10105334 | None:intergenic | 20.0% |
| !! | ACACTTAAGATATAATATCA+TGG | - | chr2_4:10105752-10105771 | Msa0314370:intron | 20.0% |
| !!! | ATTTTAGTGGTTAATTTGTT+AGG | + | chr2_4:10105823-10105842 | None:intergenic | 20.0% |
| !!! | GCTGAAATTACTTTTTTTAT+AGG | + | chr2_4:10105847-10105866 | None:intergenic | 20.0% |
| !! | TTAATTAGTTAAACAACACA+AGG | + | chr2_4:10105999-10106018 | None:intergenic | 20.0% |
| !!! | TTTGAAAAGCTCTTTATTTT+AGG | + | chr2_4:10106155-10106174 | None:intergenic | 20.0% |
| !!! | TATTTTGATGATAACACAAA+AGG | - | chr2_4:10106221-10106240 | Msa0314370:intron | 20.0% |
| !!! | TTTTCTTTTGAGATTTTAAG+GGG | + | chr2_4:10106529-10106548 | None:intergenic | 20.0% |
| !!! | CTTTTCTTTTGAGATTTTAA+GGG | + | chr2_4:10106530-10106549 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTTGAGATTTTA+AGG | + | chr2_4:10106531-10106550 | None:intergenic | 20.0% |
| !!! | AAGAGTTTTTTTTTTTTGAG+GGG | - | chr2_4:10106547-10106566 | Msa0314370:intron | 20.0% |
| !!! | ATTCTATTTGCTAGTTTATA+TGG | - | chr2_4:10106606-10106625 | Msa0314370:intron | 20.0% |
| !!! | TTGTATATTTTCACAGTAAT+GGG | + | chr2_4:10106896-10106915 | None:intergenic | 20.0% |
| !! | TTCTGATTATTAATGAAACT+TGG | - | chr2_4:10106926-10106945 | Msa0314370:intron | 20.0% |
| !! | CTACAAATTCATATAATAAC+TGG | + | chr2_4:10107760-10107779 | None:intergenic | 20.0% |
| !! | CAGTTATTATATGAATTTGT+AGG | - | chr2_4:10107758-10107777 | Msa0314370:intron | 20.0% |
| !! | TTTGTCTGTTTAATATAAGA+GGG | + | chr2_4:10107938-10107957 | None:intergenic | 20.0% |
| !! | ATATCAGATTATGTCAAAAA+AGG | - | chr2_4:10108143-10108162 | Msa0314370:intron | 20.0% |
| !! | ACTCAAAGTTAAATGAATTA+TGG | - | chr2_4:10108283-10108302 | Msa0314370:intron | 20.0% |
| !! | AAAGTTAAATGAATTATGGT+AGG | - | chr2_4:10108287-10108306 | Msa0314370:intron | 20.0% |
| !! | AAGTTAAATGAATTATGGTA+GGG | - | chr2_4:10108288-10108307 | Msa0314370:intron | 20.0% |
| !! | ATAGACTATAGATTATAACT+TGG | - | chr2_4:10108633-10108652 | Msa0314370:intron | 20.0% |
| ! | AGTTGAATTGTTGAATGAAT+AGG | + | chr2_4:10103046-10103065 | None:intergenic | 25.0% |
| ! | GAGATTGAGAAGAAAATAAA+TGG | + | chr2_4:10103074-10103093 | None:intergenic | 25.0% |
| ! | TTGATGTTACATCAGATATT+AGG | - | chr2_4:10103221-10103240 | Msa0314370:exon | 25.0% |
| ! | TCAATATCCAAAGAAACATT+AGG | + | chr2_4:10103340-10103359 | None:intergenic | 25.0% |
| !! | AAGATAAAATAAAGCCTTGT+TGG | + | chr2_4:10104413-10104432 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCACACAAAAGAA+AGG | + | chr2_4:10104494-10104513 | None:intergenic | 25.0% |
| ! | AATCAGTCTCTTAGAATTTA+TGG | - | chr2_4:10105013-10105032 | Msa0314370:intron | 25.0% |
| !!! | TTTTTAAAAAAGCAATTGGG+CGG | + | chr2_4:10105146-10105165 | None:intergenic | 25.0% |
| !! | GTTAATTTAACTTCGAATAG+TGG | + | chr2_4:10105542-10105561 | None:intergenic | 25.0% |
| ! | ATATATAGCAGTTTATGTTC+TGG | - | chr2_4:10105889-10105908 | Msa0314370:CDS | 25.0% |
| ! | TTCACAAAGAAATATTCAAG+GGG | + | chr2_4:10106056-10106075 | None:intergenic | 25.0% |
| ! | CTTCACAAAGAAATATTCAA+GGG | + | chr2_4:10106057-10106076 | None:intergenic | 25.0% |
| ! | ACTTCACAAAGAAATATTCA+AGG | + | chr2_4:10106058-10106077 | None:intergenic | 25.0% |
| !! | TCATCCTTTTTATTCTTCTT+AGG | - | chr2_4:10106122-10106141 | Msa0314370:intron | 25.0% |
| ! | GTTTCCTAAGAAGAATAAAA+AGG | + | chr2_4:10106129-10106148 | None:intergenic | 25.0% |
| !!! | CTCAGTTTTATTGAGAATTA+TGG | - | chr2_4:10106668-10106687 | Msa0314370:intron | 25.0% |
| ! | TTAAGGACATTGAAAATGAT+AGG | - | chr2_4:10106792-10106811 | Msa0314370:intron | 25.0% |
| !! | TGTATATTTTCACAGTAATG+GGG | + | chr2_4:10106895-10106914 | None:intergenic | 25.0% |
| !! | GTTGTATATTTTCACAGTAA+TGG | + | chr2_4:10106897-10106916 | None:intergenic | 25.0% |
| ! | TTAATAATCAGAAGCAGAAA+AGG | + | chr2_4:10106919-10106938 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr2_4:10107021-10107040 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr2_4:10107022-10107041 | None:intergenic | 25.0% |
| !! | AACATTTTCTATTGTCAGTT+TGG | + | chr2_4:10107254-10107273 | None:intergenic | 25.0% |
| ! | TTGAGCAAAGTCATATTAAA+TGG | - | chr2_4:10107389-10107408 | Msa0314370:intron | 25.0% |
| ! | TGAGCAAAGTCATATTAAAT+GGG | - | chr2_4:10107390-10107409 | Msa0314370:intron | 25.0% |
| ! | AACTTCATGTTAATAATGTC+TGG | + | chr2_4:10107436-10107455 | None:intergenic | 25.0% |
| ! | TGATATTATAACTGATCCTA+GGG | + | chr2_4:10107621-10107640 | None:intergenic | 25.0% |
| ! | ATGATATTATAACTGATCCT+AGG | + | chr2_4:10107622-10107641 | None:intergenic | 25.0% |
| ! | TATAAACTGCAATATCAATC+AGG | - | chr2_4:10107653-10107672 | Msa0314370:intron | 25.0% |
| ! | AACTTTATGAATTTACGATG+AGG | - | chr2_4:10107695-10107714 | Msa0314370:intron | 25.0% |
| ! | GAATTTGTAGGAAAAAGTTA+TGG | - | chr2_4:10107770-10107789 | Msa0314370:intron | 25.0% |
| ! | TTGTCTGTTTAATATAAGAG+GGG | + | chr2_4:10107937-10107956 | None:intergenic | 25.0% |
| ! | GTTTGTCTGTTTAATATAAG+AGG | + | chr2_4:10107939-10107958 | None:intergenic | 25.0% |
| !! | GATTTTCAACAATAAGACAT+AGG | + | chr2_4:10108363-10108382 | None:intergenic | 25.0% |
| ! | CTGGTAGTAATTTAAGAAAA+TGG | - | chr2_4:10108456-10108475 | Msa0314370:intron | 25.0% |
| !!! | TTTGAGGTGTAATACATTTT+TGG | + | chr2_4:10109128-10109147 | None:intergenic | 25.0% |
| ! | AAAAAGGAAAAATTGTACTC+AGG | - | chr2_4:10109401-10109420 | Msa0314370:CDS | 25.0% |
| ! | TATGAATCAATAGTTTAGCA+AGG | + | chr2_4:10109437-10109456 | None:intergenic | 25.0% |
| ! | AAAAAAACAAATTCAAAGGG+AGG | + | chr2_4:10109467-10109486 | None:intergenic | 25.0% |
| GAATTGTTGAATGAATAGGT+TGG | + | chr2_4:10103042-10103061 | None:intergenic | 30.0% | |
| ATTAGGCTTCTTTACTGTAA+AGG | - | chr2_4:10103238-10103257 | Msa0314370:CDS | 30.0% | |
| TTAGGCTTCTTTACTGTAAA+GGG | - | chr2_4:10103239-10103258 | Msa0314370:CDS | 30.0% | |
| TGTTGTTCCTAATGTTTCTT+TGG | - | chr2_4:10103330-10103349 | Msa0314370:CDS | 30.0% | |
| ! | CTTTTCAAAACTACAAACAG+GGG | + | chr2_4:10103395-10103414 | None:intergenic | 30.0% |
| ! | CCTTTTCAAAACTACAAACA+GGG | + | chr2_4:10103396-10103415 | None:intergenic | 30.0% |
| ! | ACCTTTTCAAAACTACAAAC+AGG | + | chr2_4:10103397-10103416 | None:intergenic | 30.0% |
| !! | AAATGGCCAAGTATTGAATT+AGG | + | chr2_4:10103671-10103690 | None:intergenic | 30.0% |
| CAAATCCTTACCTTACAAAT+CGG | - | chr2_4:10104005-10104024 | Msa0314370:intron | 30.0% | |
| ATCACATTGTTGATGTTGTA+AGG | - | chr2_4:10104071-10104090 | Msa0314370:intron | 30.0% | |
| ATTGTTGATGTTGTAAGGAA+TGG | - | chr2_4:10104076-10104095 | Msa0314370:intron | 30.0% | |
| CATATGATATGAGAGATAAC+TGG | + | chr2_4:10104192-10104211 | None:intergenic | 30.0% | |
| !! | TTTTCTTTTTGGCATAGGAT+TGG | - | chr2_4:10104229-10104248 | Msa0314370:intron | 30.0% |
| CATGCACTTTAAATTGCAAT+AGG | + | chr2_4:10104255-10104274 | None:intergenic | 30.0% | |
| ACTTACAGTGGTTATGTTAT+TGG | - | chr2_4:10104463-10104482 | Msa0314370:intron | 30.0% | |
| !! | TCATAGTATCTTAGCTCTAA+AGG | - | chr2_4:10104517-10104536 | Msa0314370:intron | 30.0% |
| ATAGTTTAGATGTGTGTGAT+TGG | - | chr2_4:10104678-10104697 | Msa0314370:CDS | 30.0% | |
| ATAGTATCAGAGAAAGACAT+AGG | + | chr2_4:10104859-10104878 | None:intergenic | 30.0% | |
| AGTCTCTTAGAATTTATGGT+TGG | - | chr2_4:10105017-10105036 | Msa0314370:intron | 30.0% | |
| GTCTCTTAGAATTTATGGTT+GGG | - | chr2_4:10105018-10105037 | Msa0314370:intron | 30.0% | |
| !! | TGACGACTAAATTTTTCAGA+TGG | - | chr2_4:10105379-10105398 | Msa0314370:intron | 30.0% |
| TGGCAGAATATTTCAATGAA+AGG | - | chr2_4:10105399-10105418 | Msa0314370:intron | 30.0% | |
| GAATATTTCAATGAAAGGTC+AGG | - | chr2_4:10105404-10105423 | Msa0314370:intron | 30.0% | |
| ATAGAAGGAAAAATTCCACT+TGG | - | chr2_4:10105428-10105447 | Msa0314370:intron | 30.0% | |
| AATTCTATGTTCAACTTCAC+TGG | - | chr2_4:10105458-10105477 | Msa0314370:intron | 30.0% | |
| ! | CTTTCTGCAGAAAATGATTT+TGG | - | chr2_4:10105676-10105695 | Msa0314370:intron | 30.0% |
| GCATAAAATCTAAGAACATC+AGG | + | chr2_4:10105702-10105721 | None:intergenic | 30.0% | |
| !! | TTAGTGGTTAATTTGTTAGG+AGG | + | chr2_4:10105820-10105839 | None:intergenic | 30.0% |
| ! | TTTATGTTCTGGATTAGAAG+TGG | - | chr2_4:10105900-10105919 | Msa0314370:CDS | 30.0% |
| ATGGATCAATCAACTTAAGT+CGG | + | chr2_4:10106493-10106512 | None:intergenic | 30.0% | |
| !! | TTGAGATTTTAAGGGGAAAT+GGG | + | chr2_4:10106522-10106541 | None:intergenic | 30.0% |
| !! | TTTGAGATTTTAAGGGGAAA+TGG | + | chr2_4:10106523-10106542 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTTGAGGGGAG+AGG | - | chr2_4:10106552-10106571 | Msa0314370:intron | 30.0% |
| TCAATAAAACTGAGAAGCAA+GGG | + | chr2_4:10106662-10106681 | None:intergenic | 30.0% | |
| TGTTGCAGATGTAACAATAT+GGG | + | chr2_4:10106696-10106715 | None:intergenic | 30.0% | |
| TTAACATAGTTCTCAATGTC+CGG | + | chr2_4:10106776-10106795 | None:intergenic | 30.0% | |
| GAGAAGGTTAGTATTAAGAA+TGG | - | chr2_4:10106863-10106882 | Msa0314370:intron | 30.0% | |
| !!! | ACAGTCATTTTTAGAAGAAG+AGG | - | chr2_4:10107355-10107374 | Msa0314370:intron | 30.0% |
| !! | TCATTTTTAGAAGAAGAGGA+GGG | - | chr2_4:10107359-10107378 | Msa0314370:intron | 30.0% |
| !! | CTATTTCATGAGTTGTTTTC+AGG | + | chr2_4:10107803-10107822 | None:intergenic | 30.0% |
| CTGAAAACAACTCATGAAAT+AGG | - | chr2_4:10107801-10107820 | Msa0314370:intron | 30.0% | |
| AAGAAATTGAGCTTGAAAAC+TGG | - | chr2_4:10107834-10107853 | Msa0314370:intron | 30.0% | |
| AGAAATTGAGCTTGAAAACT+GGG | - | chr2_4:10107835-10107854 | Msa0314370:intron | 30.0% | |
| ATACTAGACATGACAATTTC+TGG | - | chr2_4:10107864-10107883 | Msa0314370:intron | 30.0% | |
| AAATACTGTAGGTCTTCAAT+AGG | + | chr2_4:10107964-10107983 | None:intergenic | 30.0% | |
| ATTTCCAAATAACTCGAGTT+TGG | - | chr2_4:10107989-10108008 | Msa0314370:intron | 30.0% | |
| TTTCCAAATAACTCGAGTTT+GGG | - | chr2_4:10107990-10108009 | Msa0314370:intron | 30.0% | |
| GCAGAATAATCTACAAAGAA+AGG | - | chr2_4:10108020-10108039 | Msa0314370:intron | 30.0% | |
| ATAAACACATGAGTCAGTAT+CGG | - | chr2_4:10108491-10108510 | Msa0314370:intron | 30.0% | |
| TGTAGCAAATGTGATAAATG+TGG | + | chr2_4:10108692-10108711 | None:intergenic | 30.0% | |
| TTGGTTTCAGTTATCTCAAT+CGG | + | chr2_4:10109040-10109059 | None:intergenic | 30.0% | |
| AGATAACTGAAACCAACATT+GGG | - | chr2_4:10109044-10109063 | Msa0314370:intron | 30.0% | |
| ACATGACAGAAATGTCAAAA+GGG | - | chr2_4:10109326-10109345 | Msa0314370:CDS | 30.0% | |
| TAGGCTTCTTTACTGTAAAG+GGG | - | chr2_4:10103240-10103259 | Msa0314370:CDS | 35.0% | |
| ATCTCGATGAGGAACATAAT+AGG | - | chr2_4:10103284-10103303 | Msa0314370:CDS | 35.0% | |
| TCTCGATGAGGAACATAATA+GGG | - | chr2_4:10103285-10103304 | Msa0314370:CDS | 35.0% | |
| !! | TTGGATATTGATTTCTCTCG+TGG | - | chr2_4:10103349-10103368 | Msa0314370:CDS | 35.0% |
| !! | TGGATATTGATTTCTCTCGT+GGG | - | chr2_4:10103350-10103369 | Msa0314370:CDS | 35.0% |
| !!! | CCCTGTTTGTAGTTTTGAAA+AGG | - | chr2_4:10103393-10103412 | Msa0314370:CDS | 35.0% |
| TTGAGAAGTGAATATCTCAC+AGG | - | chr2_4:10103460-10103479 | Msa0314370:CDS | 35.0% | |
| GCATTGCCTAATTCAATACT+TGG | - | chr2_4:10103662-10103681 | Msa0314370:CDS | 35.0% | |
| ! | CCTTTAGAAGATGCAATGAA+CGG | + | chr2_4:10103694-10103713 | None:intergenic | 35.0% |
| CGTTCATTGCATCTTCTAAA+GGG | - | chr2_4:10103692-10103711 | Msa0314370:CDS | 35.0% | |
| AATCCTCAATACTTGGATGA+AGG | - | chr2_4:10103778-10103797 | Msa0314370:CDS | 35.0% | |
| ! | AAACCTTCATCCAAGTATTG+AGG | + | chr2_4:10103784-10103803 | None:intergenic | 35.0% |
| !! | CAAAACCGATTTGTAAGGTA+AGG | + | chr2_4:10104013-10104032 | None:intergenic | 35.0% |
| !! | CCTAACAAAACCGATTTGTA+AGG | + | chr2_4:10104018-10104037 | None:intergenic | 35.0% |
| !!! | CCTTACAAATCGGTTTTGTT+AGG | - | chr2_4:10104015-10104034 | Msa0314370:intron | 35.0% |
| ACTCCAATTTCAGGAAACTA+GGG | + | chr2_4:10104160-10104179 | None:intergenic | 35.0% | |
| AACTCCAATTTCAGGAAACT+AGG | + | chr2_4:10104161-10104180 | None:intergenic | 35.0% | |
| TAGTTTCCTGAAATTGGAGT+TGG | - | chr2_4:10104160-10104179 | Msa0314370:intron | 35.0% | |
| AATCATCCAACTCCAATTTC+AGG | + | chr2_4:10104169-10104188 | None:intergenic | 35.0% | |
| ! | CTCAAGCTGCATTTTCTTTT+TGG | - | chr2_4:10104218-10104237 | Msa0314370:intron | 35.0% |
| !! | CTGCATTTTCTTTTTGGCAT+AGG | - | chr2_4:10104224-10104243 | Msa0314370:intron | 35.0% |
| AACAAACTCTGTCATGGTAA+AGG | - | chr2_4:10104276-10104295 | Msa0314370:intron | 35.0% | |
| !! | GTAAAGGTGCAAATTGGTTT+TGG | - | chr2_4:10104292-10104311 | Msa0314370:intron | 35.0% |
| ! | TGATTTATCTAGCTCCAACA+AGG | - | chr2_4:10104396-10104415 | Msa0314370:intron | 35.0% |
| ACTGTAAGTAGACACTTTGT+TGG | + | chr2_4:10104452-10104471 | None:intergenic | 35.0% | |
| ! | AACAAAGTGTCTACTTACAG+TGG | - | chr2_4:10104451-10104470 | Msa0314370:intron | 35.0% |
| !! | TAGCTCTAAAGGATGTTGAA+AGG | - | chr2_4:10104528-10104547 | Msa0314370:intron | 35.0% |
| ATTAGAGAATCTTCCATGGT+TGG | - | chr2_4:10104552-10104571 | Msa0314370:intron | 35.0% | |
| AAGAAGAATTTAGCCAACCA+TGG | + | chr2_4:10104568-10104587 | None:intergenic | 35.0% | |
| CATGATAATAAGTCGAAGAG+TGG | - | chr2_4:10104620-10104639 | Msa0314370:CDS | 35.0% | |
| GCGAATCATTGGAAAATGTA+GGG | - | chr2_4:10104647-10104666 | Msa0314370:CDS | 35.0% | |
| TATTGTCAAAGTTACTTCCG+AGG | - | chr2_4:10104713-10104732 | Msa0314370:CDS | 35.0% | |
| ! | TTTGTTGTCATGTGACTGAA+AGG | - | chr2_4:10104759-10104778 | Msa0314370:intron | 35.0% |
| !!! | GGGAACTATGGTTAGTTTTA+TGG | - | chr2_4:10104813-10104832 | Msa0314370:intron | 35.0% |
| ATAGAATTGAAGCTTCCAAG+TGG | + | chr2_4:10105446-10105465 | None:intergenic | 35.0% | |
| TGGAATGAAATATCCAACCA+TGG | + | chr2_4:10105522-10105541 | None:intergenic | 35.0% | |
| ! | AAAATTAGCTTACCTAGCCA+AGG | + | chr2_4:10105630-10105649 | None:intergenic | 35.0% |
| CACAGAGTCTACTTCTAAAT+TGG | - | chr2_4:10105726-10105745 | Msa0314370:intron | 35.0% | |
| !! | GGGGAAATTTGTTAACAACA+GGG | + | chr2_4:10105796-10105815 | None:intergenic | 35.0% |
| !! | AGGGGAAATTTGTTAACAAC+AGG | + | chr2_4:10105797-10105816 | None:intergenic | 35.0% |
| !! | TGGTTAATTTGTTAGGAGGA+GGG | + | chr2_4:10105816-10105835 | None:intergenic | 35.0% |
| ACTAAGAGTTATAGAGTCTC+AGG | - | chr2_4:10106080-10106099 | Msa0314370:intron | 35.0% | |
| GAACAATTCAGACAAAGTTG+TGG | + | chr2_4:10106188-10106207 | None:intergenic | 35.0% | |
| CAACTTTGTCTGAATTGTTC+AGG | - | chr2_4:10106188-10106207 | Msa0314370:intron | 35.0% | |
| CTTACGCATCTAAAAGACAA+TGG | - | chr2_4:10106410-10106429 | Msa0314370:intron | 35.0% | |
| AAGGGGAAATGGGAAAAAAA+TGG | + | chr2_4:10106512-10106531 | None:intergenic | 35.0% | |
| CTCAATAAAACTGAGAAGCA+AGG | + | chr2_4:10106663-10106682 | None:intergenic | 35.0% | |
| CTGTTGCAGATGTAACAATA+TGG | + | chr2_4:10106697-10106716 | None:intergenic | 35.0% | |
| ATTGTTACATCTGCAACAGT+TGG | - | chr2_4:10106698-10106717 | Msa0314370:intron | 35.0% | |
| GGACATTGAGAACTATGTTA+AGG | - | chr2_4:10106775-10106794 | Msa0314370:intron | 35.0% | |
| CTTGATGCAAAAAACACATC+AGG | - | chr2_4:10106818-10106837 | Msa0314370:intron | 35.0% | |
| !! | TGCTTTGAAGTACAAAGAGA+AGG | - | chr2_4:10106847-10106866 | Msa0314370:intron | 35.0% |
| !! | TAGCCTTGTGCATTTATTTC+TGG | - | chr2_4:10106976-10106995 | Msa0314370:intron | 35.0% |
| TTGCCAGAAATAAATGCACA+AGG | + | chr2_4:10106982-10107001 | None:intergenic | 35.0% | |
| TATCTACTGACATATGCACT+TGG | + | chr2_4:10107214-10107233 | None:intergenic | 35.0% | |
| ! | TCTTTTCATTATGTCACTGC+AGG | - | chr2_4:10107327-10107346 | Msa0314370:intron | 35.0% |
| !!! | GTCATTTTTAGAAGAAGAGG+AGG | - | chr2_4:10107358-10107377 | Msa0314370:intron | 35.0% |
| !! | CATTTTTAGAAGAAGAGGAG+GGG | - | chr2_4:10107360-10107379 | Msa0314370:intron | 35.0% |
| GCAAAGTCATATTAAATGGG+TGG | - | chr2_4:10107393-10107412 | Msa0314370:intron | 35.0% | |
| ATGGGTGGAAACTGTAAAAT+TGG | - | chr2_4:10107408-10107427 | Msa0314370:intron | 35.0% | |
| AACTTTGCAGCAATAGTGAT+TGG | + | chr2_4:10107548-10107567 | None:intergenic | 35.0% | |
| ! | AAAGTTGATCTTGTTACCTC+TGG | - | chr2_4:10107562-10107581 | Msa0314370:intron | 35.0% |
| TAAATGTCAGCTGCATGTTT+AGG | - | chr2_4:10107730-10107749 | Msa0314370:intron | 35.0% | |
| AAATGTCAGCTGCATGTTTA+GGG | - | chr2_4:10107731-10107750 | Msa0314370:intron | 35.0% | |
| TGAAGACCTACAGTATTTCT+TGG | - | chr2_4:10107966-10107985 | Msa0314370:intron | 35.0% | |
| GGAAATCCAAGAAATACTGT+AGG | + | chr2_4:10107975-10107994 | None:intergenic | 35.0% | |
| CTTTGTAGATTATTCTGCTC+CGG | + | chr2_4:10108018-10108037 | None:intergenic | 35.0% | |
| AACTGAAGAGATTGACAAAC+AGG | + | chr2_4:10108048-10108067 | None:intergenic | 35.0% | |
| ATCTCTTCAGTTCAGCTTAA+TGG | - | chr2_4:10108056-10108075 | Msa0314370:intron | 35.0% | |
| TCTCTTCAGTTCAGCTTAAT+GGG | - | chr2_4:10108057-10108076 | Msa0314370:intron | 35.0% | |
| TTAGGAAACAATACCTGATC+TGG | + | chr2_4:10108102-10108121 | None:intergenic | 35.0% | |
| !! | GATTTTTCAGAAACCTCAGA+CGG | - | chr2_4:10108249-10108268 | Msa0314370:intron | 35.0% |
| CTATGTGTTAGAGTTGTGTT+TGG | + | chr2_4:10108433-10108452 | None:intergenic | 35.0% | |
| ! | GCATTGATACTTGAGATTGA+AGG | + | chr2_4:10108529-10108548 | None:intergenic | 35.0% |
| ! | CTCCTATTTTATCTGTGCAT+CGG | + | chr2_4:10108562-10108581 | None:intergenic | 35.0% |
| GATGCACAGATAAAATAGGA+GGG | - | chr2_4:10108561-10108580 | Msa0314370:intron | 35.0% | |
| ! | TAGTTTGTGTAGTTGAGTTC+AGG | - | chr2_4:10108664-10108683 | Msa0314370:intron | 35.0% |
| ! | ATTTGATCGGTTCAAACCAA+CGG | + | chr2_4:10108988-10109007 | None:intergenic | 35.0% |
| GAGAAGTTCTTCCATTTGAT+CGG | + | chr2_4:10109001-10109020 | None:intergenic | 35.0% | |
| GAGATAACTGAAACCAACAT+TGG | - | chr2_4:10109043-10109062 | Msa0314370:intron | 35.0% | |
| GATAACTGAAACCAACATTG+GGG | - | chr2_4:10109045-10109064 | Msa0314370:intron | 35.0% | |
| CCTTAGAGAAAAGTAGTTTG+AGG | + | chr2_4:10109144-10109163 | None:intergenic | 35.0% | |
| !! | CCTCAAACTACTTTTCTCTA+AGG | - | chr2_4:10109141-10109160 | Msa0314370:intron | 35.0% |
| !!! | TACTTTTCTCTAAGGTACCA+GGG | - | chr2_4:10109149-10109168 | Msa0314370:intron | 35.0% |
| GACATGACAGAAATGTCAAA+AGG | - | chr2_4:10109325-10109344 | Msa0314370:CDS | 35.0% | |
| !! | CTATTGTTTCTAGTGTGAAG+GGG | + | chr2_4:10109494-10109513 | None:intergenic | 35.0% |
| !! | GCTATTGTTTCTAGTGTGAA+GGG | + | chr2_4:10109495-10109514 | None:intergenic | 35.0% |
| !! | TTTAGTTGATGGTGATGCAA+TGG | - | chr2_4:10109585-10109604 | Msa0314370:five_prime_UTR | 35.0% |
| ATGAGCATAGTGACATTATG+AGG | - | chr2_4:10109658-10109677 | Msa0314370:five_prime_UTR | 35.0% | |
| ACCAAACAGCTACTTCAACA+AGG | - | chr2_4:10103015-10103034 | Msa0314370:three_prime_UTR | 40.0% | |
| ACCTTGTTGAAGTAGCTGTT+TGG | + | chr2_4:10103019-10103038 | None:intergenic | 40.0% | |
| TTGCAACTCAATCCAAGCTT+TGG | - | chr2_4:10103189-10103208 | Msa0314370:three_prime_UTR | 40.0% | |
| TGCAACTCAATCCAAGCTTT+GGG | - | chr2_4:10103190-10103209 | Msa0314370:three_prime_UTR | 40.0% | |
| GAAGTGAATATCTCACAGGA+AGG | - | chr2_4:10103464-10103483 | Msa0314370:CDS | 40.0% | |
| GAAGATGCAATGAACGGAAA+TGG | + | chr2_4:10103688-10103707 | None:intergenic | 40.0% | |
| CCGTTCATTGCATCTTCTAA+AGG | - | chr2_4:10103691-10103710 | Msa0314370:CDS | 40.0% | |
| CATGTTAAGAGTCCCACAAT+TGG | - | chr2_4:10103721-10103740 | Msa0314370:CDS | 40.0% | |
| TCAGACCATCATCCAATTGT+GGG | + | chr2_4:10103736-10103755 | None:intergenic | 40.0% | |
| TTCAGACCATCATCCAATTG+TGG | + | chr2_4:10103737-10103756 | None:intergenic | 40.0% | |
| ! | ATTGGATGATGGTCTGAACA+TGG | - | chr2_4:10103739-10103758 | Msa0314370:CDS | 40.0% |
| ! | TTGGATGATGGTCTGAACAT+GGG | - | chr2_4:10103740-10103759 | Msa0314370:CDS | 40.0% |
| TGAACATGGGTTTATCAGTG+AGG | - | chr2_4:10103753-10103772 | Msa0314370:CDS | 40.0% | |
| GAACATGGGTTTATCAGTGA+GGG | - | chr2_4:10103754-10103773 | Msa0314370:CDS | 40.0% | |
| GTGTGTTAAGAGTCCTACAT+TGG | - | chr2_4:10103946-10103965 | Msa0314370:intron | 40.0% | |
| GTCCTACATTGGATGAGTTA+TGG | - | chr2_4:10103957-10103976 | Msa0314370:intron | 40.0% | |
| AGCCATAACTCATCCAATGT+AGG | + | chr2_4:10103962-10103981 | None:intergenic | 40.0% | |
| ! | ATGAGTTATGGCTTGCACAT+GGG | - | chr2_4:10103969-10103988 | Msa0314370:intron | 40.0% |
| TGCACATGGGTTTATAAGTG+AGG | - | chr2_4:10103982-10104001 | Msa0314370:intron | 40.0% | |
| ! | GTCATGGTAAAGGTGCAAAT+TGG | - | chr2_4:10104286-10104305 | Msa0314370:intron | 40.0% |
| TGGTCAAGCAGAACATTATC+AGG | - | chr2_4:10104312-10104331 | Msa0314370:intron | 40.0% | |
| GGTCAAGCAGAACATTATCA+GGG | - | chr2_4:10104313-10104332 | Msa0314370:intron | 40.0% | |
| CAGAACATTATCAGGGAGTT+TGG | - | chr2_4:10104320-10104339 | Msa0314370:intron | 40.0% | |
| CATTCAGAGCTTGACAAGTA+AGG | + | chr2_4:10104356-10104375 | None:intergenic | 40.0% | |
| AGGCATTAGAGAATCTTCCA+TGG | - | chr2_4:10104548-10104567 | Msa0314370:intron | 40.0% | |
| TAATAAGTCGAAGAGTGGTG+TGG | - | chr2_4:10104625-10104644 | Msa0314370:CDS | 40.0% | |
| GGCGAATCATTGGAAAATGT+AGG | - | chr2_4:10104646-10104665 | Msa0314370:CDS | 40.0% | |
| AAATAGCCTCATGGGAACTA+TGG | - | chr2_4:10104801-10104820 | Msa0314370:intron | 40.0% | |
| AACTAACCATAGTTCCCATG+AGG | + | chr2_4:10104810-10104829 | None:intergenic | 40.0% | |
| TTAAAAAAGCAATTGGGCGG+TGG | + | chr2_4:10105143-10105162 | None:intergenic | 40.0% | |
| GATAATTAAGAGTCCCACGT+TGG | + | chr2_4:10105287-10105306 | None:intergenic | 40.0% | |
| AATGAAAGGTCAGGCATAGA+AGG | - | chr2_4:10105413-10105432 | Msa0314370:intron | 40.0% | |
| AACCATGGCAAGTGATTTAG+TGG | + | chr2_4:10105507-10105526 | None:intergenic | 40.0% | |
| ACTAAATCACTTGCCATGGT+TGG | - | chr2_4:10105506-10105525 | Msa0314370:intron | 40.0% | |
| !! | GGTTAATTTGTTAGGAGGAG+GGG | + | chr2_4:10105815-10105834 | None:intergenic | 40.0% |
| !! | GTGGTTAATTTGTTAGGAGG+AGG | + | chr2_4:10105817-10105836 | None:intergenic | 40.0% |
| ! | TGTTCTGGATTAGAAGTGGT+TGG | - | chr2_4:10105904-10105923 | Msa0314370:CDS | 40.0% |
| CAGACAAAGTTGTGGTCATT+TGG | + | chr2_4:10106180-10106199 | None:intergenic | 40.0% | |
| ATGATAACACAAAAGGCTCC+TGG | - | chr2_4:10106228-10106247 | Msa0314370:intron | 40.0% | |
| ! | GGACAGAGTCAAGTTCTAAT+CGG | - | chr2_4:10106627-10106646 | Msa0314370:intron | 40.0% |
| GTGCAGACAAAGAAGATGAT+TGG | + | chr2_4:10106754-10106773 | None:intergenic | 40.0% | |
| ATCATCTTCTTTGTCTGCAC+CGG | - | chr2_4:10106754-10106773 | Msa0314370:intron | 40.0% | |
| TCTTTGTACTTCAAAGCAGC+GGG | + | chr2_4:10106845-10106864 | None:intergenic | 40.0% | |
| CTCTTTGTACTTCAAAGCAG+CGG | + | chr2_4:10106846-10106865 | None:intergenic | 40.0% | |
| !! | TTTTCACAGTAATGGGGAAG+AGG | + | chr2_4:10106889-10106908 | None:intergenic | 40.0% |
| TGACATATGCACTTGGAGAA+TGG | + | chr2_4:10107207-10107226 | None:intergenic | 40.0% | |
| CCTTCAAGAAGAGAAACGAT+GGG | + | chr2_4:10107463-10107482 | None:intergenic | 40.0% | |
| TCCTTCAAGAAGAGAAACGA+TGG | + | chr2_4:10107464-10107483 | None:intergenic | 40.0% | |
| ! | TCTCTTCTTGAAGGAGTACA+TGG | - | chr2_4:10107469-10107488 | Msa0314370:intron | 40.0% |
| ! | AGTACATGGCGTAAAGCTTT+TGG | - | chr2_4:10107483-10107502 | Msa0314370:intron | 40.0% |
| CTCTGGCAATAGTTATGCTA+GGG | - | chr2_4:10107579-10107598 | Msa0314370:intron | 40.0% | |
| TACTGTAGGTCTTCAATAGG+AGG | + | chr2_4:10107961-10107980 | None:intergenic | 40.0% | |
| TCTGGACTGACAAAAAGCTT+AGG | + | chr2_4:10108084-10108103 | None:intergenic | 40.0% | |
| TGTATGTGTCAGTGCTTCAT+AGG | + | chr2_4:10108404-10108423 | None:intergenic | 40.0% | |
| CAACTCTAACACATAGACAC+TGG | - | chr2_4:10108437-10108456 | Msa0314370:intron | 40.0% | |
| ! | CTTGAGATTGAAGGTGTGTT+TGG | + | chr2_4:10108520-10108539 | None:intergenic | 40.0% |
| GTCCGATGCACAGATAAAAT+AGG | - | chr2_4:10108557-10108576 | Msa0314370:intron | 40.0% | |
| CGATGCACAGATAAAATAGG+AGG | - | chr2_4:10108560-10108579 | Msa0314370:intron | 40.0% | |
| ! | AATGTGGTTGGAGGTTTTTC+GGG | + | chr2_4:10108907-10108926 | None:intergenic | 40.0% |
| ! | CAATGTGGTTGGAGGTTTTT+CGG | + | chr2_4:10108908-10108927 | None:intergenic | 40.0% |
| GAAAAACCTCCAACCACATT+GGG | - | chr2_4:10108907-10108926 | Msa0314370:intron | 40.0% | |
| !! | GTTGGTTTGAACCGATCAAA+TGG | - | chr2_4:10108987-10109006 | Msa0314370:intron | 40.0% |
| TGACAATATGAACACCAGAG+AGG | + | chr2_4:10109072-10109091 | None:intergenic | 40.0% | |
| TCTGGTGTTCATATTGTCAC+TGG | - | chr2_4:10109073-10109092 | Msa0314370:intron | 40.0% | |
| CTGGTGTTCATATTGTCACT+GGG | - | chr2_4:10109074-10109093 | Msa0314370:intron | 40.0% | |
| TGGTGTTCATATTGTCACTG+GGG | - | chr2_4:10109075-10109094 | Msa0314370:intron | 40.0% | |
| !!! | CTACTTTTCTCTAAGGTACC+AGG | - | chr2_4:10109148-10109167 | Msa0314370:intron | 40.0% |
| GAAAACCACTGACGAGAAAA+AGG | - | chr2_4:10109261-10109280 | Msa0314370:intron | 40.0% | |
| ! | ATCTTCCTTTTTCTCGTCAG+TGG | + | chr2_4:10109269-10109288 | None:intergenic | 40.0% |
| ! | TTTTCGCGAGTTTTCCAATG+TGG | + | chr2_4:10109300-10109319 | None:intergenic | 40.0% |
| TGGAAAACTCGCGAAAATTG+TGG | - | chr2_4:10109303-10109322 | Msa0314370:CDS | 40.0% | |
| CAATGACCAGGAATATCTTG+CGG | + | chr2_4:10109352-10109371 | None:intergenic | 40.0% | |
| ! | CTGGTCATTGGTTAGTTACA+GGG | - | chr2_4:10109362-10109381 | Msa0314370:CDS | 40.0% |
| ! | TGGTCATTGGTTAGTTACAG+GGG | - | chr2_4:10109363-10109382 | Msa0314370:CDS | 40.0% |
| GCTAAGCTTGGAGTAGAAAA+AGG | - | chr2_4:10109385-10109404 | Msa0314370:CDS | 40.0% | |
| !! | GGCTATTGTTTCTAGTGTGA+AGG | + | chr2_4:10109496-10109515 | None:intergenic | 40.0% |
| !! | TTTACTGTAAAGGGGCACCT+GGG | - | chr2_4:10103248-10103267 | Msa0314370:CDS | 45.0% |
| ! | TAGGCTTGTTCATCTCGATG+AGG | - | chr2_4:10103273-10103292 | Msa0314370:CDS | 45.0% |
| GATTTCTCTCGTGGGAAAAG+TGG | - | chr2_4:10103358-10103377 | Msa0314370:CDS | 45.0% | |
| AGAGTCCCACAATTGGATGA+TGG | - | chr2_4:10103728-10103747 | Msa0314370:CDS | 45.0% | |
| TGAGGGCAATCCTCAATACT+TGG | - | chr2_4:10103771-10103790 | Msa0314370:CDS | 45.0% | |
| TGGCTCAACGGATCTTTGAT+AGG | + | chr2_4:10103860-10103879 | None:intergenic | 45.0% | |
| ! | ATCTATCAGGTGACGGCTAT+CGG | - | chr2_4:10103882-10103901 | Msa0314370:intron | 45.0% |
| ! | CGCTTTAGATGTCTAGTCCT+AGG | - | chr2_4:10103909-10103928 | Msa0314370:intron | 45.0% |
| ! | GATGAGTTATGGCTTGCACA+TGG | - | chr2_4:10103968-10103987 | Msa0314370:intron | 45.0% |
| GGTCCCTAGTTTCCTGAAAT+TGG | - | chr2_4:10104154-10104173 | Msa0314370:intron | 45.0% | |
| GCATGCAACAAACTCTGTCA+TGG | - | chr2_4:10104270-10104289 | Msa0314370:intron | 45.0% | |
| CACTTTGTTGGAAATCGCAG+AGG | + | chr2_4:10104440-10104459 | None:intergenic | 45.0% | |
| TGTCAAAGTTACTTCCGAGG+AGG | - | chr2_4:10104716-10104735 | Msa0314370:CDS | 45.0% | |
| ACAAATTTACCGTTGCGCCA+AGG | + | chr2_4:10104744-10104763 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr2_4:10104765-10104784 | Msa0314370:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr2_4:10104766-10104785 | Msa0314370:intron | 45.0% | |
| ATGTCCTGGAAATAGCCTCA+TGG | - | chr2_4:10104792-10104811 | Msa0314370:intron | 45.0% | |
| TGTCCTGGAAATAGCCTCAT+GGG | - | chr2_4:10104793-10104812 | Msa0314370:intron | 45.0% | |
| TGAACAAGTGTGTATAGCGG+GGG | + | chr2_4:10105251-10105270 | None:intergenic | 45.0% | |
| CTGAACAAGTGTGTATAGCG+GGG | + | chr2_4:10105252-10105271 | None:intergenic | 45.0% | |
| CCTGAACAAGTGTGTATAGC+GGG | + | chr2_4:10105253-10105272 | None:intergenic | 45.0% | |
| GCCTGAACAAGTGTGTATAG+CGG | + | chr2_4:10105254-10105273 | None:intergenic | 45.0% | |
| !! | CAACTTCACTGGCTCTTCAA+TGG | - | chr2_4:10105469-10105488 | Msa0314370:intron | 45.0% |
| AGCCACTAAATCACTTGCCA+TGG | - | chr2_4:10105502-10105521 | Msa0314370:intron | 45.0% | |
| ! | TGGCCTTGAATGATGAAGTC+AGG | - | chr2_4:10105573-10105592 | Msa0314370:intron | 45.0% |
| TAACACAAAAGGCTCCTGGT+TGG | - | chr2_4:10106232-10106251 | Msa0314370:intron | 45.0% | |
| !!! | TTTTTTTGAGGGGAGAGGAG+AGG | - | chr2_4:10106557-10106576 | Msa0314370:intron | 45.0% |
| !!! | TTTTTTGAGGGGAGAGGAGA+GGG | - | chr2_4:10106558-10106577 | Msa0314370:intron | 45.0% |
| GTTACATCTGCAACAGTTGG+TGG | - | chr2_4:10106701-10106720 | Msa0314370:intron | 45.0% | |
| GCAGAGACGTCGTGTATATT+AGG | - | chr2_4:10106723-10106742 | Msa0314370:intron | 45.0% | |
| CTTGGAGAATGGAGACTGTT+TGG | + | chr2_4:10107196-10107215 | None:intergenic | 45.0% | |
| ATTAGTAGCGTGACAGTCTG+AGG | + | chr2_4:10107294-10107313 | None:intergenic | 45.0% | |
| CCCATCGTTTCTCTTCTTGA+AGG | - | chr2_4:10107460-10107479 | Msa0314370:intron | 45.0% | |
| CCTAGCATAACTATTGCCAG+AGG | + | chr2_4:10107581-10107600 | None:intergenic | 45.0% | |
| CCTCTGGCAATAGTTATGCT+AGG | - | chr2_4:10107578-10107597 | Msa0314370:intron | 45.0% | |
| TAATGAGCTCATTCAGCCCT+AGG | - | chr2_4:10107602-10107621 | Msa0314370:intron | 45.0% | |
| ! | GCTTTTTGTCAGTCCAGATC+AGG | - | chr2_4:10108086-10108105 | Msa0314370:intron | 45.0% |
| GTGTTACAATGAACCGTCTG+AGG | + | chr2_4:10108265-10108284 | None:intergenic | 45.0% | |
| CTCTAGACTACAAGTGAGTG+AGG | - | chr2_4:10108759-10108778 | Msa0314370:intron | 45.0% | |
| TTACCTGCGATGACAAGTCA+TGG | + | chr2_4:10108790-10108809 | None:intergenic | 45.0% | |
| TTGTCATCGCAGGTAACAGT+TGG | - | chr2_4:10108794-10108813 | Msa0314370:intron | 45.0% | |
| ! | GGTTCTGTTTGTTGCCTTCT+AGG | + | chr2_4:10108850-10108869 | None:intergenic | 45.0% |
| GCTGCAAATGAATTGCGAGT+CGG | + | chr2_4:10108871-10108890 | None:intergenic | 45.0% | |
| CGAAAAACCTCCAACCACAT+TGG | - | chr2_4:10108906-10108925 | Msa0314370:intron | 45.0% | |
| AATCGGTGCAGTGCTTACAT+GGG | + | chr2_4:10109023-10109042 | None:intergenic | 45.0% | |
| GAAGATAGTTCCGTCCACAT+TGG | - | chr2_4:10109283-10109302 | Msa0314370:CDS | 45.0% | |
| CGCAAGATATTCCTGGTCAT+TGG | - | chr2_4:10109350-10109369 | Msa0314370:CDS | 45.0% | |
| CCTGTAACTAACCAATGACC+AGG | + | chr2_4:10109364-10109383 | None:intergenic | 45.0% | |
| ! | CCTGGTCATTGGTTAGTTAC+AGG | - | chr2_4:10109361-10109380 | Msa0314370:CDS | 45.0% |
| TTAGTTACAGGGGCTAAGCT+TGG | - | chr2_4:10109373-10109392 | Msa0314370:CDS | 45.0% | |
| TAGCCAAGCATTCTTTGCAC+AGG | - | chr2_4:10109511-10109530 | Msa0314370:CDS | 45.0% | |
| AGCCAAGCATTCTTTGCACA+GGG | - | chr2_4:10109512-10109531 | Msa0314370:CDS | 45.0% | |
| TTCCCTGTGCAAAGAATGCT+TGG | + | chr2_4:10109517-10109536 | None:intergenic | 45.0% | |
| !!! | TTAATTAAGTTTTTTTATAT+TGG | + | chr2_4:10104052-10104071 | None:intergenic | 5.0% |
| !! | TCAATCCAAGCTTTGGGTCG+TGG | - | chr2_4:10103196-10103215 | Msa0314370:three_prime_UTR | 50.0% |
| CAAAACCACGACCCAAAGCT+TGG | + | chr2_4:10103204-10103223 | None:intergenic | 50.0% | |
| !! | CTTTACTGTAAAGGGGCACC+TGG | - | chr2_4:10103247-10103266 | Msa0314370:CDS | 50.0% |
| AGATGAACAAGCCTAGACCC+AGG | + | chr2_4:10103268-10103287 | None:intergenic | 50.0% | |
| ! | CCTGATAGATGGTGGCTCAA+CGG | + | chr2_4:10103872-10103891 | None:intergenic | 50.0% |
| AGCCACCATCTATCAGGTGA+CGG | - | chr2_4:10103875-10103894 | Msa0314370:intron | 50.0% | |
| GATAGCCGTCACCTGATAGA+TGG | + | chr2_4:10103883-10103902 | None:intergenic | 50.0% | |
| ! | TCTATCAGGTGACGGCTATC+GGG | - | chr2_4:10103883-10103902 | Msa0314370:intron | 50.0% |
| TCAGGAAACTAGGGACCCAA+AGG | + | chr2_4:10104151-10104170 | None:intergenic | 50.0% | |
| AGAGTGGTGTGGCGAATCAT+TGG | - | chr2_4:10104636-10104655 | Msa0314370:CDS | 50.0% | |
| ! | GTTCCCATGAGGCTATTTCC+AGG | + | chr2_4:10104799-10104818 | None:intergenic | 50.0% |
| CTAACACAACCCCGCTAAAC+CGG | - | chr2_4:10105042-10105061 | Msa0314370:intron | 50.0% | |
| !! | TAAACCGGCTTGTGAGGTGA+TGG | - | chr2_4:10105057-10105076 | Msa0314370:intron | 50.0% |
| TACGGGAGAGAATCCCAATC+CGG | + | chr2_4:10105087-10105106 | None:intergenic | 50.0% | |
| CTGTCCAGTGAAAAGGCTAC+GGG | + | chr2_4:10105104-10105123 | None:intergenic | 50.0% | |
| CCTGTCCAGTGAAAAGGCTA+CGG | + | chr2_4:10105105-10105124 | None:intergenic | 50.0% | |
| ! | CGTAGCCTTTTCACTGGACA+GGG | - | chr2_4:10105103-10105122 | Msa0314370:intron | 50.0% |
| GCACTGTAGAGTCAAACGAG+TGG | - | chr2_4:10105175-10105194 | Msa0314370:CDS | 50.0% | |
| CCCGCTATACACACTTGTTC+AGG | - | chr2_4:10105250-10105269 | Msa0314370:CDS | 50.0% | |
| GCGCCTGACTTCATCATTCA+AGG | + | chr2_4:10105579-10105598 | None:intergenic | 50.0% | |
| GATGCTGGATCCCAAGAGTA+AGG | + | chr2_4:10105608-10105627 | None:intergenic | 50.0% | |
| TGTGTTTGTCTCAGCCAACC+AGG | + | chr2_4:10106249-10106268 | None:intergenic | 50.0% | |
| !! | TTTTTGAGGGGAGAGGAGAG+GGG | - | chr2_4:10106559-10106578 | Msa0314370:intron | 50.0% |
| GCGCCCAAACTCGAGTTATT+TGG | + | chr2_4:10107996-10108015 | None:intergenic | 50.0% | |
| AATAACTCGAGTTTGGGCGC+CGG | - | chr2_4:10107996-10108015 | Msa0314370:intron | 50.0% | |
| ! | ACACCATGACTTGTCATCGC+AGG | - | chr2_4:10108784-10108803 | Msa0314370:intron | 50.0% |
| TTCTAGGCTCAGCCTTAGTC+CGG | + | chr2_4:10108834-10108853 | None:intergenic | 50.0% | |
| TGTGTGCATCCCAATGTGGT+TGG | + | chr2_4:10108919-10108938 | None:intergenic | 50.0% | |
| ACCACATTGGGATGCACACA+TGG | - | chr2_4:10108919-10108938 | Msa0314370:intron | 50.0% | |
| !! | TTGCCATTTGGGAGCACCTA+TGG | + | chr2_4:10108945-10108964 | None:intergenic | 50.0% |
| ATAGGTGCTCCCAAATGGCA+AGG | - | chr2_4:10108944-10108963 | Msa0314370:intron | 50.0% | |
| CAATCGGTGCAGTGCTTACA+TGG | + | chr2_4:10109024-10109043 | None:intergenic | 50.0% | |
| TACCAGGGTGCACGATAAGA+CGG | - | chr2_4:10109164-10109183 | Msa0314370:intron | 50.0% | |
| CACGATAAGACGGTCAGTGT+GGG | - | chr2_4:10109174-10109193 | Msa0314370:intron | 50.0% | |
| GGATCATAACCCTTCCACTC+CGG | - | chr2_4:10109195-10109214 | Msa0314370:intron | 50.0% | |
| ! | TCTGATTTGTGTGCAGCTGC+CGG | + | chr2_4:10109217-10109236 | None:intergenic | 50.0% |
| GCAGCTGCACACAAATCAGA+CGG | - | chr2_4:10109217-10109236 | Msa0314370:intron | 50.0% | |
| AGACGGTGCTTCGTCATCAT+CGG | - | chr2_4:10109234-10109253 | Msa0314370:intron | 50.0% | |
| ! | CGCGAGTTTTCCAATGTGGA+CGG | + | chr2_4:10109296-10109315 | None:intergenic | 50.0% |
| AAAGGGCCGCAAGATATTCC+TGG | - | chr2_4:10109343-10109362 | Msa0314370:CDS | 50.0% | |
| CCGTTGAGCCACCATCTATC+AGG | - | chr2_4:10103869-10103888 | Msa0314370:intron | 55.0% | |
| AGCCGTCACCTGATAGATGG+TGG | + | chr2_4:10103880-10103899 | None:intergenic | 55.0% | |
| GATGTCTAGTCCTAGGCGTG+AGG | - | chr2_4:10103916-10103935 | Msa0314370:intron | 55.0% | |
| CACACACATACCTCACGCCT+AGG | + | chr2_4:10103929-10103948 | None:intergenic | 55.0% | |
| TTACTTCCGAGGAGGAGCCT+TGG | - | chr2_4:10104724-10104743 | Msa0314370:intron | 55.0% | |
| AAGGTCACGGGTTCATGTCC+TGG | - | chr2_4:10104778-10104797 | Msa0314370:intron | 55.0% | |
| CGGTTTAGCGGGGTTGTGTT+AGG | + | chr2_4:10105044-10105063 | None:intergenic | 55.0% | |
| ! | ACCTCACAAGCCGGTTTAGC+GGG | + | chr2_4:10105055-10105074 | None:intergenic | 55.0% |
| ! | CACCTCACAAGCCGGTTTAG+CGG | + | chr2_4:10105056-10105075 | None:intergenic | 55.0% |
| GCAACCATCACCTCACAAGC+CGG | + | chr2_4:10105064-10105083 | None:intergenic | 55.0% | |
| ! | CTTGTGAGGTGATGGTTGCC+CGG | - | chr2_4:10105065-10105084 | Msa0314370:intron | 55.0% |
| ! | AGGTGATGGTTGCCCGGATT+GGG | - | chr2_4:10105071-10105090 | Msa0314370:intron | 55.0% |
| ACGGGAGAGAATCCCAATCC+GGG | + | chr2_4:10105086-10105105 | None:intergenic | 55.0% | |
| ! | CTCTCCCGTAGCCTTTTCAC+TGG | - | chr2_4:10105097-10105116 | Msa0314370:intron | 55.0% |
| ! | CCGTAGCCTTTTCACTGGAC+AGG | - | chr2_4:10105102-10105121 | Msa0314370:intron | 55.0% |
| CTGCACCCTGTCCAGTGAAA+AGG | + | chr2_4:10105111-10105130 | None:intergenic | 55.0% | |
| TTTCACTGGACAGGGTGCAG+TGG | - | chr2_4:10105111-10105130 | Msa0314370:intron | 55.0% | |
| TGCAGTGACTGGAGTCCAGT+GGG | + | chr2_4:10105208-10105227 | None:intergenic | 55.0% | |
| ACTGGACTCCAGTCACTGCA+GGG | - | chr2_4:10105208-10105227 | Msa0314370:CDS | 55.0% | |
| AACAGATCCCCTGCAGTGAC+TGG | + | chr2_4:10105219-10105238 | None:intergenic | 55.0% | |
| AGGCCAGATCACTTCCAACG+TGG | - | chr2_4:10105270-10105289 | Msa0314370:CDS | 55.0% | |
| GGCCAGATCACTTCCAACGT+GGG | - | chr2_4:10105271-10105290 | Msa0314370:CDS | 55.0% | |
| GTCCCACGTTGGAAGTGATC+TGG | + | chr2_4:10105276-10105295 | None:intergenic | 55.0% | |
| GCGCGCTGTTCCTTACTCTT+GGG | - | chr2_4:10105595-10105614 | Msa0314370:intron | 55.0% | |
| CTCTTGGGATCCAGCATCCT+TGG | - | chr2_4:10105610-10105629 | Msa0314370:intron | 55.0% | |
| GCTTACCTAGCCAAGGATGC+TGG | + | chr2_4:10105623-10105642 | None:intergenic | 55.0% | |
| GGACTAAGGCTGAGCCTAGA+AGG | - | chr2_4:10108833-10108852 | Msa0314370:intron | 55.0% | |
| GTGCATCCCAATGTGGTTGG+AGG | + | chr2_4:10108916-10108935 | None:intergenic | 55.0% | |
| GCCATGTGTGCATCCCAATG+TGG | + | chr2_4:10108923-10108942 | None:intergenic | 55.0% | |
| TGGGATGCACACATGGCCAT+AGG | - | chr2_4:10108926-10108945 | Msa0314370:intron | 55.0% | |
| TGGCCATAGGTGCTCCCAAA+TGG | - | chr2_4:10108939-10108958 | Msa0314370:intron | 55.0% | |
| TGCTCCCAAATGGCAAGGTC+CGG | - | chr2_4:10108949-10108968 | Msa0314370:intron | 55.0% | |
| ! | TCCTCCGGACCTTGCCATTT+GGG | + | chr2_4:10108956-10108975 | None:intergenic | 55.0% |
| ACCAACATTGGGGACCTCTC+TGG | - | chr2_4:10109055-10109074 | Msa0314370:intron | 55.0% | |
| ACCAGAGAGGTCCCCAATGT+TGG | + | chr2_4:10109059-10109078 | None:intergenic | 55.0% | |
| ATTGTCACTGGGGCCCAACT+CGG | - | chr2_4:10109085-10109104 | Msa0314370:intron | 55.0% | |
| GAAGTCCCAAACGCCGAGTT+GGG | + | chr2_4:10109101-10109120 | None:intergenic | 55.0% | |
| ! | CAACTCGGCGTTTGGGACTT+CGG | - | chr2_4:10109100-10109119 | Msa0314370:intron | 55.0% |
| GCACGATAAGACGGTCAGTG+TGG | - | chr2_4:10109173-10109192 | Msa0314370:intron | 55.0% | |
| !! | GTAAAGGGGCACCTGGGTCT+AGG | - | chr2_4:10103254-10103273 | Msa0314370:CDS | 60.0% |
| ! | CCTCACAAGCCGGTTTAGCG+GGG | + | chr2_4:10105054-10105073 | None:intergenic | 60.0% |
| ! | GAGGTGATGGTTGCCCGGAT+TGG | - | chr2_4:10105070-10105089 | Msa0314370:intron | 60.0% |
| ACGAGTGGCTGAGATCCCAC+TGG | - | chr2_4:10105190-10105209 | Msa0314370:CDS | 60.0% | |
| CTGCAGTGACTGGAGTCCAG+TGG | + | chr2_4:10105209-10105228 | None:intergenic | 60.0% | |
| CACTGGACTCCAGTCACTGC+AGG | - | chr2_4:10105207-10105226 | Msa0314370:CDS | 60.0% | |
| CTGGACTCCAGTCACTGCAG+GGG | - | chr2_4:10105209-10105228 | Msa0314370:CDS | 60.0% | |
| ACTGCAGGGGATCTGTTCCC+TGG | - | chr2_4:10105222-10105241 | Msa0314370:CDS | 60.0% | |
| ! | GTGTATAGCGGGGGCAACCA+GGG | + | chr2_4:10105242-10105261 | None:intergenic | 60.0% |
| ! | TGTGTATAGCGGGGGCAACC+AGG | + | chr2_4:10105243-10105262 | None:intergenic | 60.0% |
| GGCGCGCTGTTCCTTACTCT+TGG | - | chr2_4:10105594-10105613 | Msa0314370:intron | 60.0% | |
| GGGATCCAGCATCCTTGGCT+AGG | - | chr2_4:10105615-10105634 | Msa0314370:intron | 60.0% | |
| GTTGGACGCAAGCCTGTGAC+CGG | - | chr2_4:10108812-10108831 | Msa0314370:intron | 60.0% | |
| GCAAGCCTGTGACCGGACTA+AGG | - | chr2_4:10108819-10108838 | Msa0314370:intron | 60.0% | |
| CTCAGCCTTAGTCCGGTCAC+AGG | + | chr2_4:10108827-10108846 | None:intergenic | 60.0% | |
| TCCCAAATGGCAAGGTCCGG+AGG | - | chr2_4:10108952-10108971 | Msa0314370:intron | 60.0% | |
| CTCCTCCGGACCTTGCCATT+TGG | + | chr2_4:10108957-10108976 | None:intergenic | 60.0% | |
| CAACGGCTGTCTTGCTCCTC+CGG | + | chr2_4:10108971-10108990 | None:intergenic | 60.0% | |
| CGAAGTCCCAAACGCCGAGT+TGG | + | chr2_4:10109102-10109121 | None:intergenic | 60.0% | |
| GACCGTCTTATCGTGCACCC+TGG | + | chr2_4:10109169-10109188 | None:intergenic | 60.0% | |
| TTTGTGTGCAGCTGCCGGAG+TGG | + | chr2_4:10109212-10109231 | None:intergenic | 60.0% | |
| GTTGCGCCAAGGCTCCTCCT+CGG | + | chr2_4:10104733-10104752 | None:intergenic | 65.0% | |
| GAGGAGGAGCCTTGGCGCAA+CGG | - | chr2_4:10104732-10104751 | Msa0314370:intron | 65.0% | |
| !! | CCCCGCTAAACCGGCTTGTG+AGG | - | chr2_4:10105051-10105070 | Msa0314370:intron | 65.0% |
| CGGAGGAGCAAGACAGCCGT+TGG | - | chr2_4:10108969-10108988 | Msa0314370:intron | 65.0% | |
| TGGGGCCCAACTCGGCGTTT+GGG | - | chr2_4:10109093-10109112 | Msa0314370:intron | 65.0% | |
| GTGCAGCTGCCGGAGTGGAA+GGG | + | chr2_4:10109207-10109226 | None:intergenic | 65.0% | |
| TGTGCAGCTGCCGGAGTGGA+AGG | + | chr2_4:10109208-10109227 | None:intergenic | 65.0% | |
| CTGGGGCCCAACTCGGCGTT+TGG | - | chr2_4:10109092-10109111 | Msa0314370:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 10103006 | 10109682 | 10103006 | ID=Msa0314370;Name=Msa0314370 |
| chr2_4 | mRNA | 10103006 | 10109682 | 10103006 | ID=Msa0314370-mRNA-1;Parent=Msa0314370;Name=Msa0314370-mRNA-1;_AED=0.10;_eAED=0.10;_QI=127|1|1|1|1|1|6|232|566 |
| chr2_4 | exon | 10103006 | 10103882 | 10103006 | ID=Msa0314370-mRNA-1:exon:3914;Parent=Msa0314370-mRNA-1 |
| chr2_4 | exon | 10104581 | 10104735 | 10104581 | ID=Msa0314370-mRNA-1:exon:3913;Parent=Msa0314370-mRNA-1 |
| chr2_4 | exon | 10105156 | 10105339 | 10105156 | ID=Msa0314370-mRNA-1:exon:3912;Parent=Msa0314370-mRNA-1 |
| chr2_4 | exon | 10105820 | 10106015 | 10105820 | ID=Msa0314370-mRNA-1:exon:3911;Parent=Msa0314370-mRNA-1 |
| chr2_4 | exon | 10107052 | 10107290 | 10107052 | ID=Msa0314370-mRNA-1:exon:3910;Parent=Msa0314370-mRNA-1 |
| chr2_4 | exon | 10109274 | 10109682 | 10109274 | ID=Msa0314370-mRNA-1:exon:3909;Parent=Msa0314370-mRNA-1 |
| chr2_4 | five_prime_UTR | 10109556 | 10109682 | 10109556 | ID=Msa0314370-mRNA-1:five_prime_utr;Parent=Msa0314370-mRNA-1 |
| chr2_4 | CDS | 10109274 | 10109555 | 10109274 | ID=Msa0314370-mRNA-1:cds;Parent=Msa0314370-mRNA-1 |
| chr2_4 | CDS | 10107052 | 10107290 | 10107052 | ID=Msa0314370-mRNA-1:cds;Parent=Msa0314370-mRNA-1 |
| chr2_4 | CDS | 10105820 | 10106015 | 10105820 | ID=Msa0314370-mRNA-1:cds;Parent=Msa0314370-mRNA-1 |
| chr2_4 | CDS | 10105156 | 10105339 | 10105156 | ID=Msa0314370-mRNA-1:cds;Parent=Msa0314370-mRNA-1 |
| chr2_4 | CDS | 10104581 | 10104735 | 10104581 | ID=Msa0314370-mRNA-1:cds;Parent=Msa0314370-mRNA-1 |
| chr2_4 | CDS | 10103238 | 10103882 | 10103238 | ID=Msa0314370-mRNA-1:cds;Parent=Msa0314370-mRNA-1 |
| chr2_4 | three_prime_UTR | 10103006 | 10103237 | 10103006 | ID=Msa0314370-mRNA-1:three_prime_utr;Parent=Msa0314370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
