Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087310 | XP_003593800.1 | 99.293 | 566 | 4 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087310 | sp|Q9C7N2|CAD1_ARATH | 74.120 | 568 | 136 | 2 | 3 | 566 | 1 | 561 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087310 | G7ILM1 | 99.293 | 566 | 4 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1168 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041880 | Msa1087310 | 0.811024 | 8.611199e-51 | -8.615850e-47 |
| Msa1087310 | Msa1111770 | 0.817553 | 3.107341e-52 | -8.615850e-47 |
| Msa1087310 | Msa1439370 | 0.985980 | 2.774450e-165 | -8.615850e-47 |
| Msa0274200 | Msa1087310 | 0.989109 | 9.869797e-177 | -8.615850e-47 |
| Msa0314370 | Msa1087310 | 0.977713 | 2.473310e-144 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087310 | MtrunA17_Chr2g0284691 | 99.293 | 566 | 4 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1168 |
| Msa1087310 | MtrunA17_Chr4g0013011 | 60.381 | 578 | 197 | 4 | 18 | 566 | 10 | 584 | 0.0 | 722 |
| Msa1087310 | MtrunA17_Chr2g0277061 | 43.697 | 595 | 269 | 11 | 22 | 565 | 15 | 594 | 9.95e-155 | 456 |
| Msa1087310 | MtrunA17_Chr8g0377631 | 39.251 | 614 | 298 | 9 | 22 | 566 | 11 | 618 | 3.19e-139 | 417 |
| Msa1087310 | MtrunA17_Chr8g0385121 | 39.835 | 605 | 295 | 11 | 11 | 564 | 2 | 588 | 2.61e-133 | 401 |
| Msa1087310 | MtrunA17_Chr3g0122211 | 38.736 | 617 | 292 | 13 | 22 | 566 | 17 | 619 | 2.71e-132 | 399 |
| Msa1087310 | MtrunA17_Chr8g0391931 | 40.772 | 596 | 286 | 15 | 22 | 565 | 9 | 589 | 1.76e-131 | 396 |
| Msa1087310 | MtrunA17_Chr4g0046841 | 38.907 | 604 | 291 | 12 | 22 | 564 | 25 | 611 | 4.96e-131 | 396 |
| Msa1087310 | MtrunA17_Chr8g0385131 | 37.786 | 569 | 312 | 10 | 22 | 566 | 16 | 566 | 7.32e-120 | 365 |
| Msa1087310 | MtrunA17_Chr8g0385181 | 39.464 | 560 | 302 | 13 | 22 | 566 | 16 | 553 | 1.41e-118 | 362 |
| Msa1087310 | MtrunA17_Chr8g0385171 | 36.120 | 299 | 179 | 7 | 6 | 301 | 2 | 291 | 4.88e-51 | 177 |
| Msa1087310 | MtrunA17_Chr8g0385161 | 36.090 | 266 | 144 | 5 | 305 | 566 | 1 | 244 | 2.71e-40 | 147 |
| Msa1087310 | MtrunA17_Chr7g0274871 | 37.241 | 145 | 80 | 4 | 22 | 163 | 130 | 266 | 4.08e-19 | 87.8 |
| Msa1087310 | MtrunA17_Chr8g0385141 | 37.037 | 108 | 67 | 1 | 127 | 233 | 13 | 120 | 3.21e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087310 | AT1G29690.1 | 74.120 | 568 | 136 | 2 | 3 | 566 | 1 | 561 | 0.0 | 865 |
| Msa1087310 | AT4G24290.2 | 42.088 | 594 | 277 | 11 | 22 | 564 | 14 | 591 | 4.82e-146 | 434 |
| Msa1087310 | AT4G24290.3 | 42.088 | 594 | 277 | 11 | 22 | 564 | 14 | 591 | 4.82e-146 | 434 |
| Msa1087310 | AT1G28380.1 | 39.866 | 597 | 296 | 11 | 22 | 565 | 18 | 604 | 8.41e-134 | 403 |
| Msa1087310 | AT1G14780.1 | 39.060 | 617 | 300 | 12 | 19 | 565 | 9 | 619 | 2.39e-130 | 395 |
| Msa1087310 | AT4G24290.1 | 37.771 | 323 | 171 | 4 | 22 | 314 | 14 | 336 | 6.29e-67 | 221 |
Find 162 sgRNAs with CRISPR-Local
Find 472 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCCCAAACTCGAGTTATT+TGG | 0.151329 | 7_3:+24570 | None:intergenic |
| TAAATTAACAAAACAAAATT+TGG | 0.151958 | 7_3:-27012 | Msa1087310:CDS |
| GGTTCTGTTTGTTGCCTTCT+AGG | 0.176268 | 7_3:+23716 | None:intergenic |
| ATCTCTTCAGTTCAGCTTAA+TGG | 0.199416 | 7_3:-24507 | Msa1087310:CDS |
| GAGATTGAGAAGAAAATAAA+TGG | 0.207046 | 7_3:+29497 | None:intergenic |
| TTGAGCAAAGTCATATTAAA+TGG | 0.226890 | 7_3:-25176 | Msa1087310:CDS |
| CCTGGTCATTGGTTAGTTAC+AGG | 0.228325 | 7_3:-23202 | Msa1087310:CDS |
| TCCTCCGGACCTTGCCATTT+GGG | 0.244585 | 7_3:+23610 | None:intergenic |
| CTCCTCCGGACCTTGCCATT+TGG | 0.248166 | 7_3:+23609 | None:intergenic |
| TGTTGTTCCTAATGTTTCTT+TGG | 0.249610 | 7_3:-29238 | Msa1087310:CDS |
| TTGATGTTACATCAGATATT+AGG | 0.264623 | 7_3:-29347 | Msa1087310:CDS |
| TGAAGACCTACAGTATTTCT+TGG | 0.272397 | 7_3:-24597 | Msa1087310:CDS |
| GAAAACCACTGACGAGAAAA+AGG | 0.281289 | 7_3:-23302 | Msa1087310:CDS |
| CTGTTGCAGATGTAACAATA+TGG | 0.285114 | 7_3:+25871 | None:intergenic |
| CTGGGGCCCAACTCGGCGTT+TGG | 0.286242 | 7_3:-23471 | Msa1087310:CDS |
| AGTACATGGCGTAAAGCTTT+TGG | 0.287935 | 7_3:-25082 | Msa1087310:CDS |
| ATGGGTGGAAACTGTAAAAT+TGG | 0.302934 | 7_3:-25157 | Msa1087310:CDS |
| ATTTCCAAATAACTCGAGTT+TGG | 0.307852 | 7_3:-24574 | Msa1087310:CDS |
| TTAGGCTTCTTTACTGTAAA+GGG | 0.308131 | 7_3:-29329 | Msa1087310:CDS |
| TCTCTTCAGTTCAGCTTAAT+GGG | 0.316945 | 7_3:-24506 | Msa1087310:CDS |
| GGCGCGCTGTTCCTTACTCT+TGG | 0.323349 | 7_3:-26971 | Msa1087310:CDS |
| TTGCAACTCAATCCAAGCTT+TGG | 0.330570 | 7_3:-29379 | Msa1087310:CDS |
| ATCTCGATGAGGAACATAAT+AGG | 0.337585 | 7_3:-29284 | Msa1087310:CDS |
| GTTAATTTAACTTCGAATAG+TGG | 0.352885 | 7_3:+27026 | None:intergenic |
| TCTGGTGTTCATATTGTCAC+TGG | 0.361807 | 7_3:-23490 | Msa1087310:CDS |
| CTCTTGGGATCCAGCATCCT+TGG | 0.364296 | 7_3:-26955 | Msa1087310:CDS |
| CAACTTCACTGGCTCTTCAA+TGG | 0.371767 | 7_3:-27096 | Msa1087310:CDS |
| TTAAGGACATTGAAAATGAT+AGG | 0.374657 | 7_3:-25773 | Msa1087310:CDS |
| GCTAAGCTTGGAGTAGAAAA+AGG | 0.376859 | 7_3:-23178 | Msa1087310:CDS |
| TGCAACTCAATCCAAGCTTT+GGG | 0.377483 | 7_3:-29378 | Msa1087310:CDS |
| CAATCGGTGCAGTGCTTACA+TGG | 0.380427 | 7_3:+23542 | None:intergenic |
| CAACGGCTGTCTTGCTCCTC+CGG | 0.382643 | 7_3:+23595 | None:intergenic |
| TTTCCAAATAACTCGAGTTT+GGG | 0.387219 | 7_3:-24573 | Msa1087310:CDS |
| CCCATCGTTTCTCTTCTTGA+AGG | 0.389904 | 7_3:-25105 | Msa1087310:CDS |
| CTGGTCATTGGTTAGTTACA+GGG | 0.399984 | 7_3:-23201 | Msa1087310:CDS |
| CTGGTGTTCATATTGTCACT+GGG | 0.402777 | 7_3:-23489 | Msa1087310:CDS |
| AATTCTATGTTCAACTTCAC+TGG | 0.404887 | 7_3:-27107 | Msa1087310:CDS |
| CTTTACTGTAAAGGGGCACC+TGG | 0.405239 | 7_3:-29321 | Msa1087310:CDS |
| CGCAAGATATTCCTGGTCAT+TGG | 0.407797 | 7_3:-23213 | Msa1087310:CDS |
| AACTGAAGAGATTGACAAAC+AGG | 0.408326 | 7_3:+24518 | None:intergenic |
| AGTTGAATTGTTGAATGAAT+AGG | 0.414435 | 7_3:+29525 | None:intergenic |
| TTAGGAAACAATACCTGATC+TGG | 0.416102 | 7_3:+24464 | None:intergenic |
| TCAATATCCAAAGAAACATT+AGG | 0.416962 | 7_3:+29231 | None:intergenic |
| GGCTATTGTTTCTAGTGTGA+AGG | 0.418357 | 7_3:+23071 | None:intergenic |
| TCTCGATGAGGAACATAATA+GGG | 0.419000 | 7_3:-29283 | Msa1087310:CDS |
| AATGAAAGGTCAGGCATAGA+AGG | 0.419511 | 7_3:-27152 | Msa1087310:CDS |
| TGGGGCCCAACTCGGCGTTT+GGG | 0.421506 | 7_3:-23470 | Msa1087310:CDS |
| ATTAGGCTTCTTTACTGTAA+AGG | 0.421799 | 7_3:-29330 | Msa1087310:CDS |
| GCAGAGACGTCGTGTATATT+AGG | 0.422089 | 7_3:-25842 | Msa1087310:CDS |
| TTGCCATTTGGGAGCACCTA+TGG | 0.423342 | 7_3:+23621 | None:intergenic |
| GCGCGCTGTTCCTTACTCTT+GGG | 0.436346 | 7_3:-26970 | Msa1087310:CDS |
| CAACTCGGCGTTTGGGACTT+CGG | 0.437523 | 7_3:-23463 | Msa1087310:CDS |
| GCGCCTGACTTCATCATTCA+AGG | 0.443883 | 7_3:+26989 | None:intergenic |
| TCAATCCAAGCTTTGGGTCG+TGG | 0.444195 | 7_3:-29372 | Msa1087310:CDS |
| AAATACTGTAGGTCTTCAAT+AGG | 0.446642 | 7_3:+24602 | None:intergenic |
| TTGGTTTCAGTTATCTCAAT+CGG | 0.449176 | 7_3:+23526 | None:intergenic |
| GAAGTCCCAAACGCCGAGTT+GGG | 0.450928 | 7_3:+23465 | None:intergenic |
| GGACTAAGGCTGAGCCTAGA+AGG | 0.451984 | 7_3:-23730 | Msa1087310:CDS |
| AGATAACTGAAACCAACATT+GGG | 0.454313 | 7_3:-23519 | Msa1087310:CDS |
| AACCATGGCAAGTGATTTAG+TGG | 0.455369 | 7_3:+27061 | None:intergenic |
| TTGGATATTGATTTCTCTCG+TGG | 0.455732 | 7_3:-29219 | Msa1087310:CDS |
| AACTTCATGTTAATAATGTC+TGG | 0.460930 | 7_3:+25132 | None:intergenic |
| TGTGCAGCTGCCGGAGTGGA+AGG | 0.461283 | 7_3:+23358 | None:intergenic |
| GTAAAGGGGCACCTGGGTCT+AGG | 0.461302 | 7_3:-29314 | Msa1087310:CDS |
| GCTTACCTAGCCAAGGATGC+TGG | 0.461481 | 7_3:+26945 | None:intergenic |
| GACATGACAGAAATGTCAAA+AGG | 0.463117 | 7_3:-23238 | Msa1087310:CDS |
| CTTTGTAGATTATTCTGCTC+CGG | 0.465985 | 7_3:+24548 | None:intergenic |
| GTTGGTTTGAACCGATCAAA+TGG | 0.470890 | 7_3:-23576 | Msa1087310:CDS |
| ACCAACATTGGGGACCTCTC+TGG | 0.475602 | 7_3:-23508 | Msa1087310:CDS |
| AAAGGGCCGCAAGATATTCC+TGG | 0.476025 | 7_3:-23220 | Msa1087310:CDS |
| TGGCCTTGAATGATGAAGTC+AGG | 0.476306 | 7_3:-26992 | Msa1087310:CDS |
| ACCTTGTTGAAGTAGCTGTT+TGG | 0.478004 | 7_3:+29552 | None:intergenic |
| TTCTAGGCTCAGCCTTAGTC+CGG | 0.478380 | 7_3:+23732 | None:intergenic |
| GCAGAATAATCTACAAAGAA+AGG | 0.478534 | 7_3:-24543 | Msa1087310:CDS |
| AGATTGAGAAGAAAATAAAT+GGG | 0.480489 | 7_3:+29498 | None:intergenic |
| ATCATCTTCTTTGTCTGCAC+CGG | 0.487290 | 7_3:-25811 | Msa1087310:CDS |
| TGCTCCCAAATGGCAAGGTC+CGG | 0.489992 | 7_3:-23614 | Msa1087310:CDS |
| TGAGCAAAGTCATATTAAAT+GGG | 0.490628 | 7_3:-25175 | Msa1087310:CDS |
| GGACATTGAGAACTATGTTA+AGG | 0.491242 | 7_3:-25790 | Msa1087310:CDS |
| GCAAGCCTGTGACCGGACTA+AGG | 0.492394 | 7_3:-23744 | Msa1087310:CDS |
| CAAAACCACGACCCAAAGCT+TGG | 0.494144 | 7_3:+29367 | None:intergenic |
| TCTCTTCTTGAAGGAGTACA+TGG | 0.494167 | 7_3:-25096 | Msa1087310:CDS |
| TAGCCAAGCATTCTTTGCAC+AGG | 0.494522 | 7_3:-23053 | Msa1087310:three_prime_UTR |
| TGGCCATAGGTGCTCCCAAA+TGG | 0.497053 | 7_3:-23624 | Msa1087310:CDS |
| TTAACATAGTTCTCAATGTC+CGG | 0.499086 | 7_3:+25792 | None:intergenic |
| GTGCAGACAAAGAAGATGAT+TGG | 0.502238 | 7_3:+25814 | None:intergenic |
| TTAGTTACAGGGGCTAAGCT+TGG | 0.503082 | 7_3:-23190 | Msa1087310:CDS |
| TTCCCTGTGCAAAGAATGCT+TGG | 0.503602 | 7_3:+23050 | None:intergenic |
| ATTGTCACTGGGGCCCAACT+CGG | 0.508327 | 7_3:-23478 | Msa1087310:CDS |
| GAATATTTCAATGAAAGGTC+AGG | 0.511169 | 7_3:-27161 | Msa1087310:CDS |
| CGAAGTCCCAAACGCCGAGT+TGG | 0.513349 | 7_3:+23464 | None:intergenic |
| ATGAGCATAGTGACATTATG+AGG | 0.517711 | 7_3:-22906 | Msa1087310:three_prime_UTR |
| TGGAAAACTCGCGAAAATTG+TGG | 0.518519 | 7_3:-23260 | Msa1087310:CDS |
| GCTATTGTTTCTAGTGTGAA+GGG | 0.519979 | 7_3:+23072 | None:intergenic |
| TCTGATTTGTGTGCAGCTGC+CGG | 0.524876 | 7_3:+23349 | None:intergenic |
| TGGATATTGATTTCTCTCGT+GGG | 0.526335 | 7_3:-29218 | Msa1087310:CDS |
| TGTTGCAGATGTAACAATAT+GGG | 0.528350 | 7_3:+25872 | None:intergenic |
| CTCTTTGTACTTCAAAGCAG+CGG | 0.529325 | 7_3:+25722 | None:intergenic |
| GAGAAGTTCTTCCATTTGAT+CGG | 0.529495 | 7_3:+23565 | None:intergenic |
| GAGATAACTGAAACCAACAT+TGG | 0.530726 | 7_3:-23520 | Msa1087310:CDS |
| CTCAGCCTTAGTCCGGTCAC+AGG | 0.530834 | 7_3:+23739 | None:intergenic |
| ACCACATTGGGATGCACACA+TGG | 0.534167 | 7_3:-23644 | Msa1087310:CDS |
| GTGCATCCCAATGTGGTTGG+AGG | 0.535892 | 7_3:+23650 | None:intergenic |
| GATGCTGGATCCCAAGAGTA+AGG | 0.536433 | 7_3:+26960 | None:intergenic |
| TGGCAGAATATTTCAATGAA+AGG | 0.536564 | 7_3:-27166 | Msa1087310:CDS |
| GTTACATCTGCAACAGTTGG+TGG | 0.540314 | 7_3:-25864 | Msa1087310:CDS |
| ACTAAATCACTTGCCATGGT+TGG | 0.541025 | 7_3:-27059 | Msa1087310:CDS |
| TACTGTAGGTCTTCAATAGG+AGG | 0.541171 | 7_3:+24605 | None:intergenic |
| GATTTCTCTCGTGGGAAAAG+TGG | 0.542981 | 7_3:-29210 | Msa1087310:CDS |
| ACCAGAGAGGTCCCCAATGT+TGG | 0.547567 | 7_3:+23507 | None:intergenic |
| GTTGGACGCAAGCCTGTGAC+CGG | 0.554152 | 7_3:-23751 | Msa1087310:CDS |
| TTTAGTTGATGGTGATGCAA+TGG | 0.556791 | 7_3:-22979 | Msa1087310:three_prime_UTR |
| TCTTTGTACTTCAAAGCAGC+GGG | 0.557262 | 7_3:+25723 | None:intergenic |
| GGGATCCAGCATCCTTGGCT+AGG | 0.559891 | 7_3:-26950 | Msa1087310:intron |
| AGACGGTGCTTCGTCATCAT+CGG | 0.560891 | 7_3:-23329 | Msa1087310:CDS |
| TGTGTGCATCCCAATGTGGT+TGG | 0.562576 | 7_3:+23647 | None:intergenic |
| TGGTCATTGGTTAGTTACAG+GGG | 0.562808 | 7_3:-23200 | Msa1087310:CDS |
| ATTTGATCGGTTCAAACCAA+CGG | 0.563797 | 7_3:+23578 | None:intergenic |
| TGGGATGCACACATGGCCAT+AGG | 0.574386 | 7_3:-23637 | Msa1087310:CDS |
| CGGAGGAGCAAGACAGCCGT+TGG | 0.574725 | 7_3:-23594 | Msa1087310:CDS |
| CCTTAGAGAAAAGTAGTTTG+AGG | 0.575804 | 7_3:+23422 | None:intergenic |
| GAAGATAGTTCCGTCCACAT+TGG | 0.576959 | 7_3:-23280 | Msa1087310:CDS |
| ACATGACAGAAATGTCAAAA+GGG | 0.578364 | 7_3:-23237 | Msa1087310:CDS |
| AGCCACTAAATCACTTGCCA+TGG | 0.581549 | 7_3:-27063 | Msa1087310:CDS |
| TTTACTGTAAAGGGGCACCT+GGG | 0.582513 | 7_3:-29320 | Msa1087310:CDS |
| TGCTTTGAAGTACAAAGAGA+AGG | 0.585123 | 7_3:-25718 | Msa1087310:intron |
| TCCCAAATGGCAAGGTCCGG+AGG | 0.587700 | 7_3:-23611 | Msa1087310:CDS |
| AAAATTAGCTTACCTAGCCA+AGG | 0.588224 | 7_3:+26938 | None:intergenic |
| CTATTGTTTCTAGTGTGAAG+GGG | 0.596042 | 7_3:+23073 | None:intergenic |
| TAGGCTTCTTTACTGTAAAG+GGG | 0.596259 | 7_3:-29328 | Msa1087310:CDS |
| ATTGTTACATCTGCAACAGT+TGG | 0.597254 | 7_3:-25867 | Msa1087310:CDS |
| CACGATAAGACGGTCAGTGT+GGG | 0.598843 | 7_3:-23389 | Msa1087310:CDS |
| TCCTTCAAGAAGAGAAACGA+TGG | 0.600405 | 7_3:+25104 | None:intergenic |
| CCTGTAACTAACCAATGACC+AGG | 0.600926 | 7_3:+23202 | None:intergenic |
| GCAAAGTCATATTAAATGGG+TGG | 0.601409 | 7_3:-25172 | Msa1087310:CDS |
| AGCCAAGCATTCTTTGCACA+GGG | 0.606581 | 7_3:-23052 | Msa1087310:three_prime_UTR |
| TATGAATCAATAGTTTAGCA+AGG | 0.610403 | 7_3:+23129 | None:intergenic |
| TTGTCATCGCAGGTAACAGT+TGG | 0.611875 | 7_3:-23769 | Msa1087310:intron |
| GACCGTCTTATCGTGCACCC+TGG | 0.616200 | 7_3:+23397 | None:intergenic |
| GGAAATCCAAGAAATACTGT+AGG | 0.618343 | 7_3:+24591 | None:intergenic |
| AATAACTCGAGTTTGGGCGC+CGG | 0.628765 | 7_3:-24567 | Msa1087310:CDS |
| GAATTGTTGAATGAATAGGT+TGG | 0.635137 | 7_3:+29529 | None:intergenic |
| GGATCATAACCCTTCCACTC+CGG | 0.636730 | 7_3:-23368 | Msa1087310:CDS |
| GCACGATAAGACGGTCAGTG+TGG | 0.639402 | 7_3:-23390 | Msa1087310:CDS |
| GTGCAGCTGCCGGAGTGGAA+GGG | 0.640888 | 7_3:+23359 | None:intergenic |
| GCAGCTGCACACAAATCAGA+CGG | 0.644603 | 7_3:-23346 | Msa1087310:CDS |
| ATAGGTGCTCCCAAATGGCA+AGG | 0.645874 | 7_3:-23619 | Msa1087310:CDS |
| TACCAGGGTGCACGATAAGA+CGG | 0.647747 | 7_3:-23399 | Msa1087310:CDS |
| AATCGGTGCAGTGCTTACAT+GGG | 0.651985 | 7_3:+23543 | None:intergenic |
| TGGAATGAAATATCCAACCA+TGG | 0.654312 | 7_3:+27046 | None:intergenic |
| CAATGACCAGGAATATCTTG+CGG | 0.654789 | 7_3:+23214 | None:intergenic |
| ATAGAATTGAAGCTTCCAAG+TGG | 0.657356 | 7_3:+27122 | None:intergenic |
| ACCAAACAGCTACTTCAACA+AGG | 0.661372 | 7_3:-29553 | Msa1087310:five_prime_UTR |
| GCTGCAAATGAATTGCGAGT+CGG | 0.663551 | 7_3:+23695 | None:intergenic |
| TTTGTGTGCAGCTGCCGGAG+TGG | 0.665993 | 7_3:+23354 | None:intergenic |
| CCTTCAAGAAGAGAAACGAT+GGG | 0.671747 | 7_3:+25105 | None:intergenic |
| GCCATGTGTGCATCCCAATG+TGG | 0.674737 | 7_3:+23643 | None:intergenic |
| AGATGAACAAGCCTAGACCC+AGG | 0.692616 | 7_3:+29303 | None:intergenic |
| TGGTGTTCATATTGTCACTG+GGG | 0.695069 | 7_3:-23488 | Msa1087310:CDS |
| TAGGCTTGTTCATCTCGATG+AGG | 0.698566 | 7_3:-29295 | Msa1087310:CDS |
| GATAACTGAAACCAACATTG+GGG | 0.738432 | 7_3:-23518 | Msa1087310:CDS |
| TGACAATATGAACACCAGAG+AGG | 0.757497 | 7_3:+23494 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATTTTTTTTGTGTA+TGG | - | chr7_3:23496-23515 | Msa1087310:CDS | 10.0% |
| !!! | AAATTTTTAAAAAAGCAATT+GGG | + | chr7_3:25050-25069 | None:intergenic | 10.0% |
| !!! | AAAATTTTTAAAAAAGCAAT+TGG | + | chr7_3:25051-25070 | None:intergenic | 10.0% |
| !! | TAAATTAACAAAACAAAATT+TGG | - | chr7_3:25454-25473 | Msa1087310:intron | 10.0% |
| !! | AAAAAAAAAACAAATTCAAA+GGG | + | chr7_3:29373-29392 | None:intergenic | 10.0% |
| !!! | ATTAAATTTTGTTGATTTAA+TGG | - | chr7_3:29534-29553 | Msa1087310:five_prime_UTR | 10.0% |
| !!! | TTTTCTATAACAAATGATTA+TGG | - | chr7_3:23018-23037 | Msa1087310:three_prime_UTR | 15.0% |
| !! | TCCAATATAAAAAGTTAATA+TGG | - | chr7_3:23725-23744 | Msa1087310:CDS | 15.0% |
| !!! | ACCATATTAACTTTTTATAT+TGG | + | chr7_3:23729-23748 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAGGAATTTTAG+TGG | + | chr7_3:25737-25756 | None:intergenic | 15.0% |
| !! | AAAAAATAAGATTAAGAATC+TGG | + | chr7_3:26259-26278 | None:intergenic | 15.0% |
| !!! | AAAAGAGTTTTTTTTTTTTG+AGG | - | chr7_3:26447-26466 | Msa1087310:intron | 15.0% |
| !!! | AAAGAGTTTTTTTTTTTTGA+GGG | - | chr7_3:26448-26467 | Msa1087310:intron | 15.0% |
| !! | TACAAATTCATATAATAACT+GGG | + | chr7_3:27662-27681 | None:intergenic | 15.0% |
| !! | TGTTAAATATAGTAGAATTT+AGG | + | chr7_3:28023-28042 | None:intergenic | 15.0% |
| !! | AAATTCTACTATATTTAACA+TGG | - | chr7_3:28023-28042 | Msa1087310:intron | 15.0% |
| !!! | ATTACAAGTTTTATTTGAAT+TGG | - | chr7_3:28228-28247 | Msa1087310:intron | 15.0% |
| !! | GAAAAAAAAAACAAATTCAA+AGG | + | chr7_3:29374-29393 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTTATTTAGTTGA+TGG | - | chr7_3:29476-29495 | Msa1087310:five_prime_UTR | 15.0% |
| !! | AGATTGAGAAGAAAATAAAT+GGG | + | chr7_3:22971-22990 | None:intergenic | 20.0% |
| !!! | CAAAAAAGTTCAGTTTTTTA+TGG | + | chr7_3:22997-23016 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTGTGTATGGAT+TGG | - | chr7_3:23501-23520 | Msa1087310:CDS | 20.0% |
| !!! | TTTTAGCATATTAATTCCTT+TGG | - | chr7_3:24033-24052 | Msa1087310:intron | 20.0% |
| !! | TTTAGCATATTAATTCCTTT+GGG | - | chr7_3:24034-24053 | Msa1087310:intron | 20.0% |
| !! | CTTCTTAAAATTACAAAACA+TGG | - | chr7_3:24483-24502 | Msa1087310:CDS | 20.0% |
| !!! | TTCAAATTTTATGTCAACAT+TGG | + | chr7_3:24828-24847 | None:intergenic | 20.0% |
| !!! | TGAACTTGTAAAAATGATTT+TGG | - | chr7_3:24844-24863 | Msa1087310:intron | 20.0% |
| !! | TGATTTCAAAACAAATAGAT+AGG | + | chr7_3:24899-24918 | None:intergenic | 20.0% |
| !! | TATATATCTTCAATCAAATG+AGG | + | chr7_3:25216-25235 | None:intergenic | 20.0% |
| !! | ACACTTAAGATATAATATCA+TGG | - | chr7_3:25653-25672 | Msa1087310:intron | 20.0% |
| !!! | ATTTTAGTGGTTAATTTGTT+AGG | + | chr7_3:25724-25743 | None:intergenic | 20.0% |
| !!! | GCTGAAATTACTTTTTTTAT+AGG | + | chr7_3:25748-25767 | None:intergenic | 20.0% |
| !! | TTAATTAGTTAAACAACACA+AGG | + | chr7_3:25900-25919 | None:intergenic | 20.0% |
| !!! | TTTGAAAAGCTCTTTATTTT+AGG | + | chr7_3:26056-26075 | None:intergenic | 20.0% |
| !!! | TATTTTGATGATAACACAAA+AGG | - | chr7_3:26122-26141 | Msa1087310:intron | 20.0% |
| !!! | TTTTCTTTTGAGATTTTAAG+GGG | + | chr7_3:26431-26450 | None:intergenic | 20.0% |
| !!! | CTTTTCTTTTGAGATTTTAA+GGG | + | chr7_3:26432-26451 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTTGAGATTTTA+AGG | + | chr7_3:26433-26452 | None:intergenic | 20.0% |
| !!! | AAGAGTTTTTTTTTTTTGAG+GGG | - | chr7_3:26449-26468 | Msa1087310:intron | 20.0% |
| !!! | ATTCTATTTGCTAGTTTATA+TGG | - | chr7_3:26507-26526 | Msa1087310:intron | 20.0% |
| !!! | TTGTATATTTTCACAGTAAT+GGG | + | chr7_3:26797-26816 | None:intergenic | 20.0% |
| !! | TTCTGATTATTAATGAAACT+TGG | - | chr7_3:26827-26846 | Msa1087310:intron | 20.0% |
| !! | CTACAAATTCATATAATAAC+TGG | + | chr7_3:27663-27682 | None:intergenic | 20.0% |
| !! | CAGTTATTATATGAATTTGT+AGG | - | chr7_3:27661-27680 | Msa1087310:intron | 20.0% |
| !! | TTTGTCTGTTTAATATAAGA+GGG | + | chr7_3:27841-27860 | None:intergenic | 20.0% |
| !! | ATATCAGATTATGTCAAAAA+AGG | - | chr7_3:28046-28065 | Msa1087310:intron | 20.0% |
| !! | ACTCAAAGTTAAATGAATTA+TGG | - | chr7_3:28186-28205 | Msa1087310:intron | 20.0% |
| !! | AAAGTTAAATGAATTATGGT+AGG | - | chr7_3:28190-28209 | Msa1087310:intron | 20.0% |
| !! | AAGTTAAATGAATTATGGTA+GGG | - | chr7_3:28191-28210 | Msa1087310:intron | 20.0% |
| !! | ATAGACTATAGATTATAACT+TGG | - | chr7_3:28536-28555 | Msa1087310:intron | 20.0% |
| ! | AGTTGAATTGTTGAATGAAT+AGG | + | chr7_3:22944-22963 | None:intergenic | 25.0% |
| ! | GAGATTGAGAAGAAAATAAA+TGG | + | chr7_3:22972-22991 | None:intergenic | 25.0% |
| ! | TTGATGTTACATCAGATATT+AGG | - | chr7_3:23119-23138 | Msa1087310:exon | 25.0% |
| ! | TCAATATCCAAAGAAACATT+AGG | + | chr7_3:23238-23257 | None:intergenic | 25.0% |
| ! | ATTAGATGAGATGATATGAA+TGG | - | chr7_3:24010-24029 | Msa1087310:intron | 25.0% |
| !! | AAGATAAAATAAAGCCTTGT+TGG | + | chr7_3:24314-24333 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCACACAAAAGAA+AGG | + | chr7_3:24395-24414 | None:intergenic | 25.0% |
| ! | AATCAGTCTCTTAGAATTTA+TGG | - | chr7_3:24914-24933 | Msa1087310:intron | 25.0% |
| !!! | TTTTTAAAAAAGCAATTGGG+CGG | + | chr7_3:25047-25066 | None:intergenic | 25.0% |
| !! | GTTAATTTAACTTCGAATAG+TGG | + | chr7_3:25443-25462 | None:intergenic | 25.0% |
| ! | ATATATAGCAGTTTATGTTC+TGG | - | chr7_3:25790-25809 | Msa1087310:CDS | 25.0% |
| ! | TTCACAAAGAAATATTCAAG+GGG | + | chr7_3:25957-25976 | None:intergenic | 25.0% |
| ! | CTTCACAAAGAAATATTCAA+GGG | + | chr7_3:25958-25977 | None:intergenic | 25.0% |
| ! | ACTTCACAAAGAAATATTCA+AGG | + | chr7_3:25959-25978 | None:intergenic | 25.0% |
| !! | TCATCCTTTTTATTCTTCTT+AGG | - | chr7_3:26023-26042 | Msa1087310:intron | 25.0% |
| ! | GTTTCCTAAGAAGAATAAAA+AGG | + | chr7_3:26030-26049 | None:intergenic | 25.0% |
| !!! | CTCAGTTTTATTGAGAATTA+TGG | - | chr7_3:26569-26588 | Msa1087310:intron | 25.0% |
| ! | TTAAGGACATTGAAAATGAT+AGG | - | chr7_3:26693-26712 | Msa1087310:intron | 25.0% |
| !! | TGTATATTTTCACAGTAATG+GGG | + | chr7_3:26796-26815 | None:intergenic | 25.0% |
| !! | GTTGTATATTTTCACAGTAA+TGG | + | chr7_3:26798-26817 | None:intergenic | 25.0% |
| ! | TTAATAATCAGAAGCAGAAA+AGG | + | chr7_3:26820-26839 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr7_3:26922-26941 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr7_3:26923-26942 | None:intergenic | 25.0% |
| !! | AACATTTTCTATTGTCAGTT+TGG | + | chr7_3:27155-27174 | None:intergenic | 25.0% |
| ! | TTGAGCAAAGTCATATTAAA+TGG | - | chr7_3:27290-27309 | Msa1087310:intron | 25.0% |
| ! | TGAGCAAAGTCATATTAAAT+GGG | - | chr7_3:27291-27310 | Msa1087310:intron | 25.0% |
| ! | AACTTCATGTTAATAATGTC+TGG | + | chr7_3:27337-27356 | None:intergenic | 25.0% |
| ! | TGATATTATAACTGATCCTA+GGG | + | chr7_3:27522-27541 | None:intergenic | 25.0% |
| ! | ATGATATTATAACTGATCCT+AGG | + | chr7_3:27523-27542 | None:intergenic | 25.0% |
| ! | TATAAACTGCAATATCAATC+AGG | - | chr7_3:27554-27573 | Msa1087310:intron | 25.0% |
| ! | AACTTTATGAATTTACGATG+AGG | - | chr7_3:27598-27617 | Msa1087310:intron | 25.0% |
| ! | GAATTTGTAGGAAAAAGTTA+TGG | - | chr7_3:27673-27692 | Msa1087310:intron | 25.0% |
| ! | TTGTCTGTTTAATATAAGAG+GGG | + | chr7_3:27840-27859 | None:intergenic | 25.0% |
| ! | GTTTGTCTGTTTAATATAAG+AGG | + | chr7_3:27842-27861 | None:intergenic | 25.0% |
| !! | GATTTTCAACAATAAGACAT+AGG | + | chr7_3:28266-28285 | None:intergenic | 25.0% |
| ! | CTGGTAGTAATTTAAGAAAA+TGG | - | chr7_3:28359-28378 | Msa1087310:intron | 25.0% |
| !!! | TTTGAGGTGTAATACATTTT+TGG | + | chr7_3:29031-29050 | None:intergenic | 25.0% |
| ! | AAAAAGGAAAAATTGTACTC+AGG | - | chr7_3:29304-29323 | Msa1087310:CDS | 25.0% |
| ! | TATGAATCAATAGTTTAGCA+AGG | + | chr7_3:29340-29359 | None:intergenic | 25.0% |
| ! | AAAAAAACAAATTCAAAGGG+AGG | + | chr7_3:29370-29389 | None:intergenic | 25.0% |
| GAATTGTTGAATGAATAGGT+TGG | + | chr7_3:22940-22959 | None:intergenic | 30.0% | |
| ATTAGGCTTCTTTACTGTAA+AGG | - | chr7_3:23136-23155 | Msa1087310:CDS | 30.0% | |
| TTAGGCTTCTTTACTGTAAA+GGG | - | chr7_3:23137-23156 | Msa1087310:CDS | 30.0% | |
| TGTTGTTCCTAATGTTTCTT+TGG | - | chr7_3:23228-23247 | Msa1087310:CDS | 30.0% | |
| ! | CTTTTCAAAACTACAAACAG+GGG | + | chr7_3:23293-23312 | None:intergenic | 30.0% |
| ! | CCTTTTCAAAACTACAAACA+GGG | + | chr7_3:23294-23313 | None:intergenic | 30.0% |
| ! | ACCTTTTCAAAACTACAAAC+AGG | + | chr7_3:23295-23314 | None:intergenic | 30.0% |
| !! | AAATGGCCAAGTATTGAATT+AGG | + | chr7_3:23570-23589 | None:intergenic | 30.0% |
| CAAATCCTTACCTTACAAAT+CGG | - | chr7_3:23906-23925 | Msa1087310:intron | 30.0% | |
| ATCACATTGTTGATGTTGTA+AGG | - | chr7_3:23972-23991 | Msa1087310:intron | 30.0% | |
| ATTGTTGATGTTGTAAGGAA+TGG | - | chr7_3:23977-23996 | Msa1087310:intron | 30.0% | |
| CATATGATATGAGAGATAAC+TGG | + | chr7_3:24093-24112 | None:intergenic | 30.0% | |
| !! | TTTTCTTTTTGGCATAGGAT+TGG | - | chr7_3:24130-24149 | Msa1087310:intron | 30.0% |
| CATGCACTTTAAATTGCAAT+AGG | + | chr7_3:24156-24175 | None:intergenic | 30.0% | |
| ACTTACAGTGGTTATGTTAT+TGG | - | chr7_3:24364-24383 | Msa1087310:intron | 30.0% | |
| !! | TCATAGTATCTTAGCTCTAA+AGG | - | chr7_3:24418-24437 | Msa1087310:intron | 30.0% |
| ATAGTTTAGATGTGTGTGAT+TGG | - | chr7_3:24579-24598 | Msa1087310:CDS | 30.0% | |
| ATAGTATCAGAGAAAGACAT+AGG | + | chr7_3:24760-24779 | None:intergenic | 30.0% | |
| AGTCTCTTAGAATTTATGGT+TGG | - | chr7_3:24918-24937 | Msa1087310:intron | 30.0% | |
| GTCTCTTAGAATTTATGGTT+GGG | - | chr7_3:24919-24938 | Msa1087310:intron | 30.0% | |
| !! | TGACGACTAAATTTTTCAGA+TGG | - | chr7_3:25280-25299 | Msa1087310:intron | 30.0% |
| TGGCAGAATATTTCAATGAA+AGG | - | chr7_3:25300-25319 | Msa1087310:intron | 30.0% | |
| GAATATTTCAATGAAAGGTC+AGG | - | chr7_3:25305-25324 | Msa1087310:intron | 30.0% | |
| ATAGAAGGAAAAATTCCACT+TGG | - | chr7_3:25329-25348 | Msa1087310:intron | 30.0% | |
| AATTCTATGTTCAACTTCAC+TGG | - | chr7_3:25359-25378 | Msa1087310:intron | 30.0% | |
| ! | CTTTCTGCAGAAAATGATTT+TGG | - | chr7_3:25577-25596 | Msa1087310:intron | 30.0% |
| GCATAAAATCTAAGAACATC+AGG | + | chr7_3:25603-25622 | None:intergenic | 30.0% | |
| !! | TTAGTGGTTAATTTGTTAGG+AGG | + | chr7_3:25721-25740 | None:intergenic | 30.0% |
| ! | TTTATGTTCTGGATTAGAAG+TGG | - | chr7_3:25801-25820 | Msa1087310:CDS | 30.0% |
| !! | TTGAGATTTTAAGGGGAAAT+GGG | + | chr7_3:26424-26443 | None:intergenic | 30.0% |
| !! | TTTGAGATTTTAAGGGGAAA+TGG | + | chr7_3:26425-26444 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTTGAGGGGAG+AGG | - | chr7_3:26454-26473 | Msa1087310:intron | 30.0% |
| TCAATAAAACTGAGAAGCAA+GGG | + | chr7_3:26563-26582 | None:intergenic | 30.0% | |
| TGTTGCAGATGTAACAATAT+GGG | + | chr7_3:26597-26616 | None:intergenic | 30.0% | |
| TTAACATAGTTCTCAATGTC+CGG | + | chr7_3:26677-26696 | None:intergenic | 30.0% | |
| GAGAAGGTTAGTATTAAGAA+TGG | - | chr7_3:26764-26783 | Msa1087310:intron | 30.0% | |
| !!! | ACAGTCATTTTTAGAAGAAG+AGG | - | chr7_3:27256-27275 | Msa1087310:intron | 30.0% |
| !! | TCATTTTTAGAAGAAGAGGA+GGG | - | chr7_3:27260-27279 | Msa1087310:intron | 30.0% |
| !! | CTATTTCATGAGTTGTTTTC+AGG | + | chr7_3:27706-27725 | None:intergenic | 30.0% |
| CTGAAAACAACTCATGAAAT+AGG | - | chr7_3:27704-27723 | Msa1087310:intron | 30.0% | |
| AAGAAATTGAGCTTGAAAAC+TGG | - | chr7_3:27737-27756 | Msa1087310:intron | 30.0% | |
| AGAAATTGAGCTTGAAAACT+GGG | - | chr7_3:27738-27757 | Msa1087310:intron | 30.0% | |
| ATACTAGACATGACAATTTC+TGG | - | chr7_3:27767-27786 | Msa1087310:intron | 30.0% | |
| AAATACTGTAGGTCTTCAAT+AGG | + | chr7_3:27867-27886 | None:intergenic | 30.0% | |
| ATTTCCAAATAACTCGAGTT+TGG | - | chr7_3:27892-27911 | Msa1087310:intron | 30.0% | |
| TTTCCAAATAACTCGAGTTT+GGG | - | chr7_3:27893-27912 | Msa1087310:intron | 30.0% | |
| GCAGAATAATCTACAAAGAA+AGG | - | chr7_3:27923-27942 | Msa1087310:intron | 30.0% | |
| ATAAACACATGAGTCAGTAT+CGG | - | chr7_3:28394-28413 | Msa1087310:intron | 30.0% | |
| TGTAGCAAATGTGATAAATG+TGG | + | chr7_3:28595-28614 | None:intergenic | 30.0% | |
| TTGGTTTCAGTTATCTCAAT+CGG | + | chr7_3:28943-28962 | None:intergenic | 30.0% | |
| AGATAACTGAAACCAACATT+GGG | - | chr7_3:28947-28966 | Msa1087310:intron | 30.0% | |
| ACATGACAGAAATGTCAAAA+GGG | - | chr7_3:29229-29248 | Msa1087310:CDS | 30.0% | |
| TAGGCTTCTTTACTGTAAAG+GGG | - | chr7_3:23138-23157 | Msa1087310:CDS | 35.0% | |
| ATCTCGATGAGGAACATAAT+AGG | - | chr7_3:23182-23201 | Msa1087310:CDS | 35.0% | |
| TCTCGATGAGGAACATAATA+GGG | - | chr7_3:23183-23202 | Msa1087310:CDS | 35.0% | |
| !! | TTGGATATTGATTTCTCTCG+TGG | - | chr7_3:23247-23266 | Msa1087310:CDS | 35.0% |
| !! | TGGATATTGATTTCTCTCGT+GGG | - | chr7_3:23248-23267 | Msa1087310:CDS | 35.0% |
| !!! | CCCTGTTTGTAGTTTTGAAA+AGG | - | chr7_3:23291-23310 | Msa1087310:CDS | 35.0% |
| TTGAGAAGTGAATATCTCAC+AGG | - | chr7_3:23358-23377 | Msa1087310:CDS | 35.0% | |
| GCATTGCCTAATTCAATACT+TGG | - | chr7_3:23561-23580 | Msa1087310:CDS | 35.0% | |
| ! | CCTTTAGAAGATGCAATGAA+CGG | + | chr7_3:23593-23612 | None:intergenic | 35.0% |
| CGTTCATTGCATCTTCTAAA+GGG | - | chr7_3:23591-23610 | Msa1087310:CDS | 35.0% | |
| AATCCTCAATACTTGGATGA+AGG | - | chr7_3:23677-23696 | Msa1087310:CDS | 35.0% | |
| ! | AAACCTTCATCCAAGTATTG+AGG | + | chr7_3:23683-23702 | None:intergenic | 35.0% |
| !! | CAAAACCGATTTGTAAGGTA+AGG | + | chr7_3:23914-23933 | None:intergenic | 35.0% |
| !! | CCTAACAAAACCGATTTGTA+AGG | + | chr7_3:23919-23938 | None:intergenic | 35.0% |
| !!! | CCTTACAAATCGGTTTTGTT+AGG | - | chr7_3:23916-23935 | Msa1087310:intron | 35.0% |
| ACTCCAATTTCAGGAAACTA+GGG | + | chr7_3:24061-24080 | None:intergenic | 35.0% | |
| AACTCCAATTTCAGGAAACT+AGG | + | chr7_3:24062-24081 | None:intergenic | 35.0% | |
| TAGTTTCCTGAAATTGGAGT+TGG | - | chr7_3:24061-24080 | Msa1087310:intron | 35.0% | |
| AATCATCCAACTCCAATTTC+AGG | + | chr7_3:24070-24089 | None:intergenic | 35.0% | |
| ! | CTCAAGCTGCATTTTCTTTT+TGG | - | chr7_3:24119-24138 | Msa1087310:intron | 35.0% |
| !! | CTGCATTTTCTTTTTGGCAT+AGG | - | chr7_3:24125-24144 | Msa1087310:intron | 35.0% |
| AACAAACTCTGTCATGGTAA+AGG | - | chr7_3:24177-24196 | Msa1087310:intron | 35.0% | |
| !! | GTAAAGGTGCAAATTGGTTT+TGG | - | chr7_3:24193-24212 | Msa1087310:intron | 35.0% |
| ! | TGATTTATCTAGCTCCAACA+AGG | - | chr7_3:24297-24316 | Msa1087310:intron | 35.0% |
| ACTGTAAGTAGACACTTTGT+TGG | + | chr7_3:24353-24372 | None:intergenic | 35.0% | |
| ! | AACAAAGTGTCTACTTACAG+TGG | - | chr7_3:24352-24371 | Msa1087310:intron | 35.0% |
| !! | TAGCTCTAAAGGATGTTGAA+AGG | - | chr7_3:24429-24448 | Msa1087310:intron | 35.0% |
| ATTAGAGAATCTTCCATGGT+TGG | - | chr7_3:24453-24472 | Msa1087310:intron | 35.0% | |
| AAGAAGAATTTAGCCAACCA+TGG | + | chr7_3:24469-24488 | None:intergenic | 35.0% | |
| CATGATAATAAGTCGAAGAG+TGG | - | chr7_3:24521-24540 | Msa1087310:CDS | 35.0% | |
| GCGAATCATTGGAAAATGTA+GGG | - | chr7_3:24548-24567 | Msa1087310:CDS | 35.0% | |
| TATTGTCAAAGTTACTTCCG+AGG | - | chr7_3:24614-24633 | Msa1087310:intron | 35.0% | |
| ! | TTTGTTGTCATGTGACTGAA+AGG | - | chr7_3:24660-24679 | Msa1087310:intron | 35.0% |
| !!! | GGGAACTATGGTTAGTTTTA+TGG | - | chr7_3:24714-24733 | Msa1087310:intron | 35.0% |
| ATAGAATTGAAGCTTCCAAG+TGG | + | chr7_3:25347-25366 | None:intergenic | 35.0% | |
| TGGAATGAAATATCCAACCA+TGG | + | chr7_3:25423-25442 | None:intergenic | 35.0% | |
| ! | AAAATTAGCTTACCTAGCCA+AGG | + | chr7_3:25531-25550 | None:intergenic | 35.0% |
| CACAGAGTCTACTTCTAAAT+TGG | - | chr7_3:25627-25646 | Msa1087310:intron | 35.0% | |
| !! | GGGGAAATTTGTTAACAACA+GGG | + | chr7_3:25697-25716 | None:intergenic | 35.0% |
| !! | AGGGGAAATTTGTTAACAAC+AGG | + | chr7_3:25698-25717 | None:intergenic | 35.0% |
| !! | TGGTTAATTTGTTAGGAGGA+GGG | + | chr7_3:25717-25736 | None:intergenic | 35.0% |
| ACTAAGAGTTATAGAGTCTC+AGG | - | chr7_3:25981-26000 | Msa1087310:intron | 35.0% | |
| GAACAATTCAGACAAAGTTG+TGG | + | chr7_3:26089-26108 | None:intergenic | 35.0% | |
| CAACTTTGTCTGAATTGTTC+AGG | - | chr7_3:26089-26108 | Msa1087310:intron | 35.0% | |
| CTTACGCATCTAAAAGACAA+TGG | - | chr7_3:26311-26330 | Msa1087310:intron | 35.0% | |
| TGGGATCAATCAACTTAAGT+CGG | + | chr7_3:26394-26413 | None:intergenic | 35.0% | |
| AGGGGAAATGGGAAAAAAAT+GGG | + | chr7_3:26413-26432 | None:intergenic | 35.0% | |
| AAGGGGAAATGGGAAAAAAA+TGG | + | chr7_3:26414-26433 | None:intergenic | 35.0% | |
| CTCAATAAAACTGAGAAGCA+AGG | + | chr7_3:26564-26583 | None:intergenic | 35.0% | |
| CTGTTGCAGATGTAACAATA+TGG | + | chr7_3:26598-26617 | None:intergenic | 35.0% | |
| ATTGTTACATCTGCAACAGT+TGG | - | chr7_3:26599-26618 | Msa1087310:intron | 35.0% | |
| GGACATTGAGAACTATGTTA+AGG | - | chr7_3:26676-26695 | Msa1087310:intron | 35.0% | |
| CTTGATGCAAAAAACACATC+AGG | - | chr7_3:26719-26738 | Msa1087310:intron | 35.0% | |
| !! | TGCTTTGAAGTACAAAGAGA+AGG | - | chr7_3:26748-26767 | Msa1087310:intron | 35.0% |
| !! | TAGCCTTGTGCATTTATTTC+TGG | - | chr7_3:26877-26896 | Msa1087310:intron | 35.0% |
| TTGCCAGAAATAAATGCACA+AGG | + | chr7_3:26883-26902 | None:intergenic | 35.0% | |
| TATCTACTGACATATGCACT+TGG | + | chr7_3:27115-27134 | None:intergenic | 35.0% | |
| ! | TCTTTTCATTATGTCACTGC+AGG | - | chr7_3:27228-27247 | Msa1087310:intron | 35.0% |
| !!! | GTCATTTTTAGAAGAAGAGG+AGG | - | chr7_3:27259-27278 | Msa1087310:intron | 35.0% |
| !! | CATTTTTAGAAGAAGAGGAG+GGG | - | chr7_3:27261-27280 | Msa1087310:intron | 35.0% |
| GCAAAGTCATATTAAATGGG+TGG | - | chr7_3:27294-27313 | Msa1087310:intron | 35.0% | |
| ATGGGTGGAAACTGTAAAAT+TGG | - | chr7_3:27309-27328 | Msa1087310:intron | 35.0% | |
| AACTTTGCAGCAATAGTGAT+TGG | + | chr7_3:27449-27468 | None:intergenic | 35.0% | |
| ! | AAAGTTGATCTTGTTACCTC+TGG | - | chr7_3:27463-27482 | Msa1087310:intron | 35.0% |
| TAAATGTCAGCTGCATGTTT+AGG | - | chr7_3:27633-27652 | Msa1087310:intron | 35.0% | |
| AAATGTCAGCTGCATGTTTA+GGG | - | chr7_3:27634-27653 | Msa1087310:intron | 35.0% | |
| TGAAGACCTACAGTATTTCT+TGG | - | chr7_3:27869-27888 | Msa1087310:intron | 35.0% | |
| GGAAATCCAAGAAATACTGT+AGG | + | chr7_3:27878-27897 | None:intergenic | 35.0% | |
| CTTTGTAGATTATTCTGCTC+CGG | + | chr7_3:27921-27940 | None:intergenic | 35.0% | |
| AACTGAAGAGATTGACAAAC+AGG | + | chr7_3:27951-27970 | None:intergenic | 35.0% | |
| ATCTCTTCAGTTCAGCTTAA+TGG | - | chr7_3:27959-27978 | Msa1087310:intron | 35.0% | |
| TCTCTTCAGTTCAGCTTAAT+GGG | - | chr7_3:27960-27979 | Msa1087310:intron | 35.0% | |
| TTAGGAAACAATACCTGATC+TGG | + | chr7_3:28005-28024 | None:intergenic | 35.0% | |
| !! | GATTTTTCAGAAACCTCAGA+CGG | - | chr7_3:28152-28171 | Msa1087310:intron | 35.0% |
| CTATGTGTTAGAGTTGTGTT+TGG | + | chr7_3:28336-28355 | None:intergenic | 35.0% | |
| ! | GCATTGATACTTGAGATTGA+AGG | + | chr7_3:28432-28451 | None:intergenic | 35.0% |
| ! | CTCCTATTTTATCTGTGCAT+CGG | + | chr7_3:28465-28484 | None:intergenic | 35.0% |
| GATGCACAGATAAAATAGGA+GGG | - | chr7_3:28464-28483 | Msa1087310:intron | 35.0% | |
| ! | TAGTTTGTGTAGTTGAGTTC+AGG | - | chr7_3:28567-28586 | Msa1087310:intron | 35.0% |
| ! | ATTTGATCGGTTCAAACCAA+CGG | + | chr7_3:28891-28910 | None:intergenic | 35.0% |
| GAGAAGTTCTTCCATTTGAT+CGG | + | chr7_3:28904-28923 | None:intergenic | 35.0% | |
| GAGATAACTGAAACCAACAT+TGG | - | chr7_3:28946-28965 | Msa1087310:intron | 35.0% | |
| GATAACTGAAACCAACATTG+GGG | - | chr7_3:28948-28967 | Msa1087310:intron | 35.0% | |
| CCTTAGAGAAAAGTAGTTTG+AGG | + | chr7_3:29047-29066 | None:intergenic | 35.0% | |
| !! | CCTCAAACTACTTTTCTCTA+AGG | - | chr7_3:29044-29063 | Msa1087310:intron | 35.0% |
| !!! | TACTTTTCTCTAAGGTACCA+GGG | - | chr7_3:29052-29071 | Msa1087310:intron | 35.0% |
| GACATGACAGAAATGTCAAA+AGG | - | chr7_3:29228-29247 | Msa1087310:CDS | 35.0% | |
| !! | CTATTGTTTCTAGTGTGAAG+GGG | + | chr7_3:29396-29415 | None:intergenic | 35.0% |
| !! | GCTATTGTTTCTAGTGTGAA+GGG | + | chr7_3:29397-29416 | None:intergenic | 35.0% |
| !! | TTTAGTTGATGGTGATGCAA+TGG | - | chr7_3:29487-29506 | Msa1087310:five_prime_UTR | 35.0% |
| ATGAGCATAGTGACATTATG+AGG | - | chr7_3:29560-29579 | Msa1087310:five_prime_UTR | 35.0% | |
| ACCAAACAGCTACTTCAACA+AGG | - | chr7_3:22913-22932 | Msa1087310:three_prime_UTR | 40.0% | |
| ACCTTGTTGAAGTAGCTGTT+TGG | + | chr7_3:22917-22936 | None:intergenic | 40.0% | |
| TTGCAACTCAATCCAAGCTT+TGG | - | chr7_3:23087-23106 | Msa1087310:three_prime_UTR | 40.0% | |
| TGCAACTCAATCCAAGCTTT+GGG | - | chr7_3:23088-23107 | Msa1087310:three_prime_UTR | 40.0% | |
| GAAGTGAATATCTCACAGGA+AGG | - | chr7_3:23362-23381 | Msa1087310:CDS | 40.0% | |
| GAAGATGCAATGAACGGAAA+TGG | + | chr7_3:23587-23606 | None:intergenic | 40.0% | |
| CCGTTCATTGCATCTTCTAA+AGG | - | chr7_3:23590-23609 | Msa1087310:CDS | 40.0% | |
| CATGTTAAGAGTCCCACAAT+TGG | - | chr7_3:23620-23639 | Msa1087310:CDS | 40.0% | |
| TCAGACCATCATCCAATTGT+GGG | + | chr7_3:23635-23654 | None:intergenic | 40.0% | |
| TTCAGACCATCATCCAATTG+TGG | + | chr7_3:23636-23655 | None:intergenic | 40.0% | |
| ! | ATTGGATGATGGTCTGAACA+TGG | - | chr7_3:23638-23657 | Msa1087310:CDS | 40.0% |
| ! | TTGGATGATGGTCTGAACAT+GGG | - | chr7_3:23639-23658 | Msa1087310:CDS | 40.0% |
| TGAACATGGGTTTATCAGTG+AGG | - | chr7_3:23652-23671 | Msa1087310:CDS | 40.0% | |
| GAACATGGGTTTATCAGTGA+GGG | - | chr7_3:23653-23672 | Msa1087310:CDS | 40.0% | |
| GTGTGTTAAGAGTCCTACAT+TGG | - | chr7_3:23847-23866 | Msa1087310:intron | 40.0% | |
| GTCCTACATTGGATGAGTTA+TGG | - | chr7_3:23858-23877 | Msa1087310:intron | 40.0% | |
| AGCCATAACTCATCCAATGT+AGG | + | chr7_3:23863-23882 | None:intergenic | 40.0% | |
| ! | ATGAGTTATGGCTTGCACAT+GGG | - | chr7_3:23870-23889 | Msa1087310:intron | 40.0% |
| TGCACATGGGTTTATAAGTG+AGG | - | chr7_3:23883-23902 | Msa1087310:intron | 40.0% | |
| ! | GTCATGGTAAAGGTGCAAAT+TGG | - | chr7_3:24187-24206 | Msa1087310:intron | 40.0% |
| TGGTCAAGCAGAACATTATC+AGG | - | chr7_3:24213-24232 | Msa1087310:intron | 40.0% | |
| GGTCAAGCAGAACATTATCA+GGG | - | chr7_3:24214-24233 | Msa1087310:intron | 40.0% | |
| CAGAACATTATCAGGGAGTT+TGG | - | chr7_3:24221-24240 | Msa1087310:intron | 40.0% | |
| CATTCAGAGCTTGACAAGTA+AGG | + | chr7_3:24257-24276 | None:intergenic | 40.0% | |
| AGGCATTAGAGAATCTTCCA+TGG | - | chr7_3:24449-24468 | Msa1087310:intron | 40.0% | |
| TAATAAGTCGAAGAGTGGTG+TGG | - | chr7_3:24526-24545 | Msa1087310:CDS | 40.0% | |
| GGCGAATCATTGGAAAATGT+AGG | - | chr7_3:24547-24566 | Msa1087310:CDS | 40.0% | |
| AAATAGCCTCATGGGAACTA+TGG | - | chr7_3:24702-24721 | Msa1087310:intron | 40.0% | |
| AACTAACCATAGTTCCCATG+AGG | + | chr7_3:24711-24730 | None:intergenic | 40.0% | |
| TTAAAAAAGCAATTGGGCGG+TGG | + | chr7_3:25044-25063 | None:intergenic | 40.0% | |
| GATAATTAAGAGTCCCACGT+TGG | + | chr7_3:25188-25207 | None:intergenic | 40.0% | |
| AATGAAAGGTCAGGCATAGA+AGG | - | chr7_3:25314-25333 | Msa1087310:intron | 40.0% | |
| AACCATGGCAAGTGATTTAG+TGG | + | chr7_3:25408-25427 | None:intergenic | 40.0% | |
| ACTAAATCACTTGCCATGGT+TGG | - | chr7_3:25407-25426 | Msa1087310:intron | 40.0% | |
| !! | GGTTAATTTGTTAGGAGGAG+GGG | + | chr7_3:25716-25735 | None:intergenic | 40.0% |
| !! | GTGGTTAATTTGTTAGGAGG+AGG | + | chr7_3:25718-25737 | None:intergenic | 40.0% |
| ! | TGTTCTGGATTAGAAGTGGT+TGG | - | chr7_3:25805-25824 | Msa1087310:CDS | 40.0% |
| CAGACAAAGTTGTGGTCATT+TGG | + | chr7_3:26081-26100 | None:intergenic | 40.0% | |
| ATGATAACACAAAAGGCTCC+TGG | - | chr7_3:26129-26148 | Msa1087310:intron | 40.0% | |
| ! | GGACAGAGTCAAGTTCTAAT+CGG | - | chr7_3:26528-26547 | Msa1087310:intron | 40.0% |
| GTGCAGACAAAGAAGATGAT+TGG | + | chr7_3:26655-26674 | None:intergenic | 40.0% | |
| ATCATCTTCTTTGTCTGCAC+CGG | - | chr7_3:26655-26674 | Msa1087310:intron | 40.0% | |
| TCTTTGTACTTCAAAGCAGC+GGG | + | chr7_3:26746-26765 | None:intergenic | 40.0% | |
| CTCTTTGTACTTCAAAGCAG+CGG | + | chr7_3:26747-26766 | None:intergenic | 40.0% | |
| !! | TTTTCACAGTAATGGGGAAG+AGG | + | chr7_3:26790-26809 | None:intergenic | 40.0% |
| CACTCTATTTATGCCCTGTT+TGG | - | chr7_3:26906-26925 | Msa1087310:intron | 40.0% | |
| TGACATATGCACTTGGAGAA+TGG | + | chr7_3:27108-27127 | None:intergenic | 40.0% | |
| CCTTCAAGAAGAGAAACGAT+GGG | + | chr7_3:27364-27383 | None:intergenic | 40.0% | |
| TCCTTCAAGAAGAGAAACGA+TGG | + | chr7_3:27365-27384 | None:intergenic | 40.0% | |
| ! | TCTCTTCTTGAAGGAGTACA+TGG | - | chr7_3:27370-27389 | Msa1087310:intron | 40.0% |
| ! | AGTACATGGCGTAAAGCTTT+TGG | - | chr7_3:27384-27403 | Msa1087310:intron | 40.0% |
| CTCTGGCAATAGTTATGCTA+GGG | - | chr7_3:27480-27499 | Msa1087310:intron | 40.0% | |
| TACTGTAGGTCTTCAATAGG+AGG | + | chr7_3:27864-27883 | None:intergenic | 40.0% | |
| TCTGGACTGACAAAAAGCTT+AGG | + | chr7_3:27987-28006 | None:intergenic | 40.0% | |
| TGTATGTGTCAGTGCTTCAT+AGG | + | chr7_3:28307-28326 | None:intergenic | 40.0% | |
| CAACTCTAACACATAGACAC+TGG | - | chr7_3:28340-28359 | Msa1087310:intron | 40.0% | |
| ! | CTTGAGATTGAAGGTGTGTT+TGG | + | chr7_3:28423-28442 | None:intergenic | 40.0% |
| GTCCGATGCACAGATAAAAT+AGG | - | chr7_3:28460-28479 | Msa1087310:intron | 40.0% | |
| CGATGCACAGATAAAATAGG+AGG | - | chr7_3:28463-28482 | Msa1087310:intron | 40.0% | |
| ! | AATGTGGTTGGAGGTTTTTC+GGG | + | chr7_3:28810-28829 | None:intergenic | 40.0% |
| ! | CAATGTGGTTGGAGGTTTTT+CGG | + | chr7_3:28811-28830 | None:intergenic | 40.0% |
| GAAAAACCTCCAACCACATT+GGG | - | chr7_3:28810-28829 | Msa1087310:intron | 40.0% | |
| !! | GTTGGTTTGAACCGATCAAA+TGG | - | chr7_3:28890-28909 | Msa1087310:intron | 40.0% |
| TGACAATATGAACACCAGAG+AGG | + | chr7_3:28975-28994 | None:intergenic | 40.0% | |
| TCTGGTGTTCATATTGTCAC+TGG | - | chr7_3:28976-28995 | Msa1087310:intron | 40.0% | |
| CTGGTGTTCATATTGTCACT+GGG | - | chr7_3:28977-28996 | Msa1087310:intron | 40.0% | |
| TGGTGTTCATATTGTCACTG+GGG | - | chr7_3:28978-28997 | Msa1087310:intron | 40.0% | |
| !!! | CTACTTTTCTCTAAGGTACC+AGG | - | chr7_3:29051-29070 | Msa1087310:intron | 40.0% |
| GAAAACCACTGACGAGAAAA+AGG | - | chr7_3:29164-29183 | Msa1087310:intron | 40.0% | |
| ! | ATCTTCCTTTTTCTCGTCAG+TGG | + | chr7_3:29172-29191 | None:intergenic | 40.0% |
| ! | TTTTCGCGAGTTTTCCAATG+TGG | + | chr7_3:29203-29222 | None:intergenic | 40.0% |
| TGGAAAACTCGCGAAAATTG+TGG | - | chr7_3:29206-29225 | Msa1087310:CDS | 40.0% | |
| CAATGACCAGGAATATCTTG+CGG | + | chr7_3:29255-29274 | None:intergenic | 40.0% | |
| ! | CTGGTCATTGGTTAGTTACA+GGG | - | chr7_3:29265-29284 | Msa1087310:CDS | 40.0% |
| ! | TGGTCATTGGTTAGTTACAG+GGG | - | chr7_3:29266-29285 | Msa1087310:CDS | 40.0% |
| GCTAAGCTTGGAGTAGAAAA+AGG | - | chr7_3:29288-29307 | Msa1087310:CDS | 40.0% | |
| !! | GGCTATTGTTTCTAGTGTGA+AGG | + | chr7_3:29398-29417 | None:intergenic | 40.0% |
| !! | TTTACTGTAAAGGGGCACCT+GGG | - | chr7_3:23146-23165 | Msa1087310:CDS | 45.0% |
| ! | TAGGCTTGTTCATCTCGATG+AGG | - | chr7_3:23171-23190 | Msa1087310:CDS | 45.0% |
| GATTTCTCTCGTGGGAAAAG+TGG | - | chr7_3:23256-23275 | Msa1087310:CDS | 45.0% | |
| AGAGTCCCACAATTGGATGA+TGG | - | chr7_3:23627-23646 | Msa1087310:CDS | 45.0% | |
| TGAGGGCAATCCTCAATACT+TGG | - | chr7_3:23670-23689 | Msa1087310:CDS | 45.0% | |
| TGGCTCAACGGATCTTTGAT+AGG | + | chr7_3:23759-23778 | None:intergenic | 45.0% | |
| ! | ATCTATCAGGTGACGGCTAT+CGG | - | chr7_3:23781-23800 | Msa1087310:intron | 45.0% |
| ! | CGCTTTAGATGTCTAGTCCT+AGG | - | chr7_3:23808-23827 | Msa1087310:intron | 45.0% |
| ! | GATGAGTTATGGCTTGCACA+TGG | - | chr7_3:23869-23888 | Msa1087310:intron | 45.0% |
| GGTCCCTAGTTTCCTGAAAT+TGG | - | chr7_3:24055-24074 | Msa1087310:intron | 45.0% | |
| GCATGCAACAAACTCTGTCA+TGG | - | chr7_3:24171-24190 | Msa1087310:intron | 45.0% | |
| CACTTTGTTGGAAATCGCAG+AGG | + | chr7_3:24341-24360 | None:intergenic | 45.0% | |
| TGTCAAAGTTACTTCCGAGG+AGG | - | chr7_3:24617-24636 | Msa1087310:intron | 45.0% | |
| ACAAATTTACCGTTGCGCCA+AGG | + | chr7_3:24645-24664 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr7_3:24666-24685 | Msa1087310:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr7_3:24667-24686 | Msa1087310:intron | 45.0% | |
| ATGTCCTGGAAATAGCCTCA+TGG | - | chr7_3:24693-24712 | Msa1087310:intron | 45.0% | |
| TGTCCTGGAAATAGCCTCAT+GGG | - | chr7_3:24694-24713 | Msa1087310:intron | 45.0% | |
| TGAACAAGTGTGTATAGCGG+GGG | + | chr7_3:25152-25171 | None:intergenic | 45.0% | |
| CTGAACAAGTGTGTATAGCG+GGG | + | chr7_3:25153-25172 | None:intergenic | 45.0% | |
| CCTGAACAAGTGTGTATAGC+GGG | + | chr7_3:25154-25173 | None:intergenic | 45.0% | |
| GCCTGAACAAGTGTGTATAG+CGG | + | chr7_3:25155-25174 | None:intergenic | 45.0% | |
| !! | CAACTTCACTGGCTCTTCAA+TGG | - | chr7_3:25370-25389 | Msa1087310:intron | 45.0% |
| AGCCACTAAATCACTTGCCA+TGG | - | chr7_3:25403-25422 | Msa1087310:intron | 45.0% | |
| ! | TGGCCTTGAATGATGAAGTC+AGG | - | chr7_3:25474-25493 | Msa1087310:intron | 45.0% |
| TAACACAAAAGGCTCCTGGT+TGG | - | chr7_3:26133-26152 | Msa1087310:intron | 45.0% | |
| !!! | TTTTTTTGAGGGGAGAGGAG+AGG | - | chr7_3:26459-26478 | Msa1087310:intron | 45.0% |
| !!! | TTTTTTGAGGGGAGAGGAGA+GGG | - | chr7_3:26460-26479 | Msa1087310:intron | 45.0% |
| GTTACATCTGCAACAGTTGG+TGG | - | chr7_3:26602-26621 | Msa1087310:intron | 45.0% | |
| GCAGAGACGTCGTGTATATT+AGG | - | chr7_3:26624-26643 | Msa1087310:intron | 45.0% | |
| CTTGGAGAATGGAGACTGTT+TGG | + | chr7_3:27097-27116 | None:intergenic | 45.0% | |
| ATTAGTAGCGTGACAGTCTG+AGG | + | chr7_3:27195-27214 | None:intergenic | 45.0% | |
| CCCATCGTTTCTCTTCTTGA+AGG | - | chr7_3:27361-27380 | Msa1087310:intron | 45.0% | |
| CCTAGCATAACTATTGCCAG+AGG | + | chr7_3:27482-27501 | None:intergenic | 45.0% | |
| CCTCTGGCAATAGTTATGCT+AGG | - | chr7_3:27479-27498 | Msa1087310:intron | 45.0% | |
| TAATGAGCTCATTCAGCCCT+AGG | - | chr7_3:27503-27522 | Msa1087310:intron | 45.0% | |
| ! | GCTTTTTGTCAGTCCAGATC+AGG | - | chr7_3:27989-28008 | Msa1087310:intron | 45.0% |
| GTGTTACAATGAACCGTCTG+AGG | + | chr7_3:28168-28187 | None:intergenic | 45.0% | |
| CTCTAGACTACAAGTGAGTG+AGG | - | chr7_3:28662-28681 | Msa1087310:intron | 45.0% | |
| TTACCTGCGATGACAAGTCA+TGG | + | chr7_3:28693-28712 | None:intergenic | 45.0% | |
| TTGTCATCGCAGGTAACAGT+TGG | - | chr7_3:28697-28716 | Msa1087310:intron | 45.0% | |
| ! | GGTTCTGTTTGTTGCCTTCT+AGG | + | chr7_3:28753-28772 | None:intergenic | 45.0% |
| GCTGCAAATGAATTGCGAGT+CGG | + | chr7_3:28774-28793 | None:intergenic | 45.0% | |
| CGAAAAACCTCCAACCACAT+TGG | - | chr7_3:28809-28828 | Msa1087310:intron | 45.0% | |
| AATCGGTGCAGTGCTTACAT+GGG | + | chr7_3:28926-28945 | None:intergenic | 45.0% | |
| GAAGATAGTTCCGTCCACAT+TGG | - | chr7_3:29186-29205 | Msa1087310:CDS | 45.0% | |
| CGCAAGATATTCCTGGTCAT+TGG | - | chr7_3:29253-29272 | Msa1087310:CDS | 45.0% | |
| CCTGTAACTAACCAATGACC+AGG | + | chr7_3:29267-29286 | None:intergenic | 45.0% | |
| ! | CCTGGTCATTGGTTAGTTAC+AGG | - | chr7_3:29264-29283 | Msa1087310:CDS | 45.0% |
| TTAGTTACAGGGGCTAAGCT+TGG | - | chr7_3:29276-29295 | Msa1087310:CDS | 45.0% | |
| TAGCCAAGCATTCTTTGCAC+AGG | - | chr7_3:29413-29432 | Msa1087310:CDS | 45.0% | |
| AGCCAAGCATTCTTTGCACA+GGG | - | chr7_3:29414-29433 | Msa1087310:CDS | 45.0% | |
| TTCCCTGTGCAAAGAATGCT+TGG | + | chr7_3:29419-29438 | None:intergenic | 45.0% | |
| !!! | TTAATTAAGTTTTTTTATAT+TGG | + | chr7_3:23953-23972 | None:intergenic | 5.0% |
| !! | TCAATCCAAGCTTTGGGTCG+TGG | - | chr7_3:23094-23113 | Msa1087310:three_prime_UTR | 50.0% |
| CAAAACCACGACCCAAAGCT+TGG | + | chr7_3:23102-23121 | None:intergenic | 50.0% | |
| !! | CTTTACTGTAAAGGGGCACC+TGG | - | chr7_3:23145-23164 | Msa1087310:CDS | 50.0% |
| AGATGAACAAGCCTAGACCC+AGG | + | chr7_3:23166-23185 | None:intergenic | 50.0% | |
| ! | CCTGATAGATGGTGGCTCAA+CGG | + | chr7_3:23771-23790 | None:intergenic | 50.0% |
| AGCCACCATCTATCAGGTGA+CGG | - | chr7_3:23774-23793 | Msa1087310:intron | 50.0% | |
| GATAGCCGTCACCTGATAGA+TGG | + | chr7_3:23782-23801 | None:intergenic | 50.0% | |
| ! | TCTATCAGGTGACGGCTATC+GGG | - | chr7_3:23782-23801 | Msa1087310:intron | 50.0% |
| TCAGGAAACTAGGGACCCAA+AGG | + | chr7_3:24052-24071 | None:intergenic | 50.0% | |
| AGAGTGGTGTGGCGAATCAT+TGG | - | chr7_3:24537-24556 | Msa1087310:CDS | 50.0% | |
| ! | GTTCCCATGAGGCTATTTCC+AGG | + | chr7_3:24700-24719 | None:intergenic | 50.0% |
| CTAACACAACCCCGCTAAAC+CGG | - | chr7_3:24943-24962 | Msa1087310:intron | 50.0% | |
| !! | TAAACCGGCTTGTGAGGTGA+TGG | - | chr7_3:24958-24977 | Msa1087310:intron | 50.0% |
| TACGGGAGAGAATCCCAATC+CGG | + | chr7_3:24988-25007 | None:intergenic | 50.0% | |
| CTGTCCAGTGAAAAGGCTAC+GGG | + | chr7_3:25005-25024 | None:intergenic | 50.0% | |
| CCTGTCCAGTGAAAAGGCTA+CGG | + | chr7_3:25006-25025 | None:intergenic | 50.0% | |
| ! | CGTAGCCTTTTCACTGGACA+GGG | - | chr7_3:25004-25023 | Msa1087310:intron | 50.0% |
| GCACTGTAGAGTCAAACGAG+TGG | - | chr7_3:25076-25095 | Msa1087310:CDS | 50.0% | |
| CCCGCTATACACACTTGTTC+AGG | - | chr7_3:25151-25170 | Msa1087310:CDS | 50.0% | |
| GCGCCTGACTTCATCATTCA+AGG | + | chr7_3:25480-25499 | None:intergenic | 50.0% | |
| GATGCTGGATCCCAAGAGTA+AGG | + | chr7_3:25509-25528 | None:intergenic | 50.0% | |
| TGTGTTTGTCTCAGCCAACC+AGG | + | chr7_3:26150-26169 | None:intergenic | 50.0% | |
| !! | TTTTTGAGGGGAGAGGAGAG+GGG | - | chr7_3:26461-26480 | Msa1087310:intron | 50.0% |
| GCGCCCAAACTCGAGTTATT+TGG | + | chr7_3:27899-27918 | None:intergenic | 50.0% | |
| AATAACTCGAGTTTGGGCGC+CGG | - | chr7_3:27899-27918 | Msa1087310:intron | 50.0% | |
| ! | ACACCATGACTTGTCATCGC+AGG | - | chr7_3:28687-28706 | Msa1087310:intron | 50.0% |
| TTCTAGGCTCAGCCTTAGTC+CGG | + | chr7_3:28737-28756 | None:intergenic | 50.0% | |
| TGTGTGCATCCCAATGTGGT+TGG | + | chr7_3:28822-28841 | None:intergenic | 50.0% | |
| ACCACATTGGGATGCACACA+TGG | - | chr7_3:28822-28841 | Msa1087310:intron | 50.0% | |
| !! | TTGCCATTTGGGAGCACCTA+TGG | + | chr7_3:28848-28867 | None:intergenic | 50.0% |
| ATAGGTGCTCCCAAATGGCA+AGG | - | chr7_3:28847-28866 | Msa1087310:intron | 50.0% | |
| CAATCGGTGCAGTGCTTACA+TGG | + | chr7_3:28927-28946 | None:intergenic | 50.0% | |
| TACCAGGGTGCACGATAAGA+CGG | - | chr7_3:29067-29086 | Msa1087310:intron | 50.0% | |
| CACGATAAGACGGTCAGTGT+GGG | - | chr7_3:29077-29096 | Msa1087310:intron | 50.0% | |
| GGATCATAACCCTTCCACTC+CGG | - | chr7_3:29098-29117 | Msa1087310:intron | 50.0% | |
| ! | TCTGATTTGTGTGCAGCTGC+CGG | + | chr7_3:29120-29139 | None:intergenic | 50.0% |
| GCAGCTGCACACAAATCAGA+CGG | - | chr7_3:29120-29139 | Msa1087310:intron | 50.0% | |
| AGACGGTGCTTCGTCATCAT+CGG | - | chr7_3:29137-29156 | Msa1087310:intron | 50.0% | |
| ! | CGCGAGTTTTCCAATGTGGA+CGG | + | chr7_3:29199-29218 | None:intergenic | 50.0% |
| AAAGGGCCGCAAGATATTCC+TGG | - | chr7_3:29246-29265 | Msa1087310:CDS | 50.0% | |
| CCGTTGAGCCACCATCTATC+AGG | - | chr7_3:23768-23787 | Msa1087310:intron | 55.0% | |
| AGCCGTCACCTGATAGATGG+TGG | + | chr7_3:23779-23798 | None:intergenic | 55.0% | |
| GATGTCTAGTCCTAGGCGTG+AGG | - | chr7_3:23815-23834 | Msa1087310:intron | 55.0% | |
| CACACACATACCTCACGCCT+AGG | + | chr7_3:23828-23847 | None:intergenic | 55.0% | |
| TTACTTCCGAGGAGGAGCCT+TGG | - | chr7_3:24625-24644 | Msa1087310:intron | 55.0% | |
| AAGGTCACGGGTTCATGTCC+TGG | - | chr7_3:24679-24698 | Msa1087310:intron | 55.0% | |
| CGGTTTAGCGGGGTTGTGTT+AGG | + | chr7_3:24945-24964 | None:intergenic | 55.0% | |
| ! | ACCTCACAAGCCGGTTTAGC+GGG | + | chr7_3:24956-24975 | None:intergenic | 55.0% |
| ! | CACCTCACAAGCCGGTTTAG+CGG | + | chr7_3:24957-24976 | None:intergenic | 55.0% |
| GCAACCATCACCTCACAAGC+CGG | + | chr7_3:24965-24984 | None:intergenic | 55.0% | |
| ! | CTTGTGAGGTGATGGTTGCC+CGG | - | chr7_3:24966-24985 | Msa1087310:intron | 55.0% |
| ! | AGGTGATGGTTGCCCGGATT+GGG | - | chr7_3:24972-24991 | Msa1087310:intron | 55.0% |
| ACGGGAGAGAATCCCAATCC+GGG | + | chr7_3:24987-25006 | None:intergenic | 55.0% | |
| ! | CTCTCCCGTAGCCTTTTCAC+TGG | - | chr7_3:24998-25017 | Msa1087310:intron | 55.0% |
| ! | CCGTAGCCTTTTCACTGGAC+AGG | - | chr7_3:25003-25022 | Msa1087310:intron | 55.0% |
| CTGCACCCTGTCCAGTGAAA+AGG | + | chr7_3:25012-25031 | None:intergenic | 55.0% | |
| TTTCACTGGACAGGGTGCAG+TGG | - | chr7_3:25012-25031 | Msa1087310:intron | 55.0% | |
| TGCAGTGACTGGAGTCCAGT+GGG | + | chr7_3:25109-25128 | None:intergenic | 55.0% | |
| ACTGGACTCCAGTCACTGCA+GGG | - | chr7_3:25109-25128 | Msa1087310:CDS | 55.0% | |
| AACAGATCCCCTGCAGTGAC+TGG | + | chr7_3:25120-25139 | None:intergenic | 55.0% | |
| AGGCCAGATCACTTCCAACG+TGG | - | chr7_3:25171-25190 | Msa1087310:CDS | 55.0% | |
| GGCCAGATCACTTCCAACGT+GGG | - | chr7_3:25172-25191 | Msa1087310:CDS | 55.0% | |
| GTCCCACGTTGGAAGTGATC+TGG | + | chr7_3:25177-25196 | None:intergenic | 55.0% | |
| GCGCGCTGTTCCTTACTCTT+GGG | - | chr7_3:25496-25515 | Msa1087310:intron | 55.0% | |
| CTCTTGGGATCCAGCATCCT+TGG | - | chr7_3:25511-25530 | Msa1087310:intron | 55.0% | |
| GCTTACCTAGCCAAGGATGC+TGG | + | chr7_3:25524-25543 | None:intergenic | 55.0% | |
| GGACTAAGGCTGAGCCTAGA+AGG | - | chr7_3:28736-28755 | Msa1087310:intron | 55.0% | |
| GTGCATCCCAATGTGGTTGG+AGG | + | chr7_3:28819-28838 | None:intergenic | 55.0% | |
| GCCATGTGTGCATCCCAATG+TGG | + | chr7_3:28826-28845 | None:intergenic | 55.0% | |
| TGGGATGCACACATGGCCAT+AGG | - | chr7_3:28829-28848 | Msa1087310:intron | 55.0% | |
| TGGCCATAGGTGCTCCCAAA+TGG | - | chr7_3:28842-28861 | Msa1087310:intron | 55.0% | |
| TGCTCCCAAATGGCAAGGTC+CGG | - | chr7_3:28852-28871 | Msa1087310:intron | 55.0% | |
| ! | TCCTCCGGACCTTGCCATTT+GGG | + | chr7_3:28859-28878 | None:intergenic | 55.0% |
| ACCAACATTGGGGACCTCTC+TGG | - | chr7_3:28958-28977 | Msa1087310:intron | 55.0% | |
| ACCAGAGAGGTCCCCAATGT+TGG | + | chr7_3:28962-28981 | None:intergenic | 55.0% | |
| ATTGTCACTGGGGCCCAACT+CGG | - | chr7_3:28988-29007 | Msa1087310:intron | 55.0% | |
| GAAGTCCCAAACGCCGAGTT+GGG | + | chr7_3:29004-29023 | None:intergenic | 55.0% | |
| ! | CAACTCGGCGTTTGGGACTT+CGG | - | chr7_3:29003-29022 | Msa1087310:intron | 55.0% |
| GCACGATAAGACGGTCAGTG+TGG | - | chr7_3:29076-29095 | Msa1087310:intron | 55.0% | |
| !! | GTAAAGGGGCACCTGGGTCT+AGG | - | chr7_3:23152-23171 | Msa1087310:CDS | 60.0% |
| ! | CCTCACAAGCCGGTTTAGCG+GGG | + | chr7_3:24955-24974 | None:intergenic | 60.0% |
| ! | GAGGTGATGGTTGCCCGGAT+TGG | - | chr7_3:24971-24990 | Msa1087310:intron | 60.0% |
| ACGAGTGGCTGAGATCCCAC+TGG | - | chr7_3:25091-25110 | Msa1087310:CDS | 60.0% | |
| CTGCAGTGACTGGAGTCCAG+TGG | + | chr7_3:25110-25129 | None:intergenic | 60.0% | |
| CACTGGACTCCAGTCACTGC+AGG | - | chr7_3:25108-25127 | Msa1087310:CDS | 60.0% | |
| CTGGACTCCAGTCACTGCAG+GGG | - | chr7_3:25110-25129 | Msa1087310:CDS | 60.0% | |
| ACTGCAGGGGATCTGTTCCC+TGG | - | chr7_3:25123-25142 | Msa1087310:CDS | 60.0% | |
| ! | GTGTATAGCGGGGGCAACCA+GGG | + | chr7_3:25143-25162 | None:intergenic | 60.0% |
| ! | TGTGTATAGCGGGGGCAACC+AGG | + | chr7_3:25144-25163 | None:intergenic | 60.0% |
| GGCGCGCTGTTCCTTACTCT+TGG | - | chr7_3:25495-25514 | Msa1087310:intron | 60.0% | |
| GGGATCCAGCATCCTTGGCT+AGG | - | chr7_3:25516-25535 | Msa1087310:intron | 60.0% | |
| GTTGGACGCAAGCCTGTGAC+CGG | - | chr7_3:28715-28734 | Msa1087310:intron | 60.0% | |
| GCAAGCCTGTGACCGGACTA+AGG | - | chr7_3:28722-28741 | Msa1087310:intron | 60.0% | |
| CTCAGCCTTAGTCCGGTCAC+AGG | + | chr7_3:28730-28749 | None:intergenic | 60.0% | |
| TCCCAAATGGCAAGGTCCGG+AGG | - | chr7_3:28855-28874 | Msa1087310:intron | 60.0% | |
| CTCCTCCGGACCTTGCCATT+TGG | + | chr7_3:28860-28879 | None:intergenic | 60.0% | |
| CAACGGCTGTCTTGCTCCTC+CGG | + | chr7_3:28874-28893 | None:intergenic | 60.0% | |
| CGAAGTCCCAAACGCCGAGT+TGG | + | chr7_3:29005-29024 | None:intergenic | 60.0% | |
| GACCGTCTTATCGTGCACCC+TGG | + | chr7_3:29072-29091 | None:intergenic | 60.0% | |
| TTTGTGTGCAGCTGCCGGAG+TGG | + | chr7_3:29115-29134 | None:intergenic | 60.0% | |
| GTTGCGCCAAGGCTCCTCCT+CGG | + | chr7_3:24634-24653 | None:intergenic | 65.0% | |
| GAGGAGGAGCCTTGGCGCAA+CGG | - | chr7_3:24633-24652 | Msa1087310:intron | 65.0% | |
| !! | CCCCGCTAAACCGGCTTGTG+AGG | - | chr7_3:24952-24971 | Msa1087310:intron | 65.0% |
| CGGAGGAGCAAGACAGCCGT+TGG | - | chr7_3:28872-28891 | Msa1087310:intron | 65.0% | |
| TGGGGCCCAACTCGGCGTTT+GGG | - | chr7_3:28996-29015 | Msa1087310:intron | 65.0% | |
| GTGCAGCTGCCGGAGTGGAA+GGG | + | chr7_3:29110-29129 | None:intergenic | 65.0% | |
| TGTGCAGCTGCCGGAGTGGA+AGG | + | chr7_3:29111-29130 | None:intergenic | 65.0% | |
| CTGGGGCCCAACTCGGCGTT+TGG | - | chr7_3:28995-29014 | Msa1087310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 22904 | 29584 | 22904 | ID=Msa1087310;Name=Msa1087310 |
| chr7_3 | mRNA | 22904 | 29584 | 22904 | ID=Msa1087310-mRNA-1;Parent=Msa1087310;Name=Msa1087310-mRNA-1;_AED=0.10;_eAED=0.10;_QI=127|1|1|1|1|1|6|231|566 |
| chr7_3 | exon | 22904 | 23779 | 22904 | ID=Msa1087310-mRNA-1:exon:32;Parent=Msa1087310-mRNA-1 |
| chr7_3 | exon | 24478 | 24632 | 24478 | ID=Msa1087310-mRNA-1:exon:31;Parent=Msa1087310-mRNA-1 |
| chr7_3 | exon | 25055 | 25238 | 25055 | ID=Msa1087310-mRNA-1:exon:30;Parent=Msa1087310-mRNA-1 |
| chr7_3 | exon | 25719 | 25914 | 25719 | ID=Msa1087310-mRNA-1:exon:29;Parent=Msa1087310-mRNA-1 |
| chr7_3 | exon | 26951 | 27189 | 26951 | ID=Msa1087310-mRNA-1:exon:28;Parent=Msa1087310-mRNA-1 |
| chr7_3 | exon | 29176 | 29584 | 29176 | ID=Msa1087310-mRNA-1:exon:27;Parent=Msa1087310-mRNA-1 |
| chr7_3 | five_prime_UTR | 29458 | 29584 | 29458 | ID=Msa1087310-mRNA-1:five_prime_utr;Parent=Msa1087310-mRNA-1 |
| chr7_3 | CDS | 29176 | 29457 | 29176 | ID=Msa1087310-mRNA-1:cds;Parent=Msa1087310-mRNA-1 |
| chr7_3 | CDS | 26951 | 27189 | 26951 | ID=Msa1087310-mRNA-1:cds;Parent=Msa1087310-mRNA-1 |
| chr7_3 | CDS | 25719 | 25914 | 25719 | ID=Msa1087310-mRNA-1:cds;Parent=Msa1087310-mRNA-1 |
| chr7_3 | CDS | 25055 | 25238 | 25055 | ID=Msa1087310-mRNA-1:cds;Parent=Msa1087310-mRNA-1 |
| chr7_3 | CDS | 24478 | 24632 | 24478 | ID=Msa1087310-mRNA-1:cds;Parent=Msa1087310-mRNA-1 |
| chr7_3 | CDS | 23135 | 23779 | 23135 | ID=Msa1087310-mRNA-1:cds;Parent=Msa1087310-mRNA-1 |
| chr7_3 | three_prime_UTR | 22904 | 23134 | 22904 | ID=Msa1087310-mRNA-1:three_prime_utr;Parent=Msa1087310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
