Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274200 | XP_003593800.1 | 99.293 | 566 | 4 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274200 | sp|Q9C7N2|CAD1_ARATH | 74.120 | 568 | 136 | 2 | 3 | 566 | 1 | 561 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041880 | Msa0274200 | 0.802530 | 5.371067e-49 | -8.615850e-47 |
| Msa0274200 | Msa0314370 | 0.975549 | 3.711118e-140 | -8.615850e-47 |
| Msa0274200 | Msa1087310 | 0.989109 | 9.869797e-177 | -8.615850e-47 |
| Msa0274200 | Msa1111770 | 0.803515 | 3.360767e-49 | -8.615850e-47 |
| Msa0274200 | Msa1439370 | 0.996647 | 2.751032e-230 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274200 | MtrunA17_Chr2g0284691 | 99.293 | 566 | 4 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1168 |
| Msa0274200 | MtrunA17_Chr4g0013011 | 60.381 | 578 | 197 | 4 | 18 | 566 | 10 | 584 | 0.0 | 722 |
| Msa0274200 | MtrunA17_Chr2g0277061 | 43.697 | 595 | 269 | 11 | 22 | 565 | 15 | 594 | 9.95e-155 | 456 |
| Msa0274200 | MtrunA17_Chr8g0377631 | 39.251 | 614 | 298 | 9 | 22 | 566 | 11 | 618 | 3.19e-139 | 417 |
| Msa0274200 | MtrunA17_Chr8g0385121 | 39.835 | 605 | 295 | 11 | 11 | 564 | 2 | 588 | 2.61e-133 | 401 |
| Msa0274200 | MtrunA17_Chr3g0122211 | 38.736 | 617 | 292 | 13 | 22 | 566 | 17 | 619 | 2.71e-132 | 399 |
| Msa0274200 | MtrunA17_Chr8g0391931 | 40.772 | 596 | 286 | 15 | 22 | 565 | 9 | 589 | 1.76e-131 | 396 |
| Msa0274200 | MtrunA17_Chr4g0046841 | 38.907 | 604 | 291 | 12 | 22 | 564 | 25 | 611 | 4.96e-131 | 396 |
| Msa0274200 | MtrunA17_Chr8g0385131 | 37.786 | 569 | 312 | 10 | 22 | 566 | 16 | 566 | 7.32e-120 | 365 |
| Msa0274200 | MtrunA17_Chr8g0385181 | 39.464 | 560 | 302 | 13 | 22 | 566 | 16 | 553 | 1.41e-118 | 362 |
| Msa0274200 | MtrunA17_Chr8g0385171 | 36.120 | 299 | 179 | 7 | 6 | 301 | 2 | 291 | 4.88e-51 | 177 |
| Msa0274200 | MtrunA17_Chr8g0385161 | 36.090 | 266 | 144 | 5 | 305 | 566 | 1 | 244 | 2.71e-40 | 147 |
| Msa0274200 | MtrunA17_Chr7g0274871 | 37.241 | 145 | 80 | 4 | 22 | 163 | 130 | 266 | 4.08e-19 | 87.8 |
| Msa0274200 | MtrunA17_Chr8g0385141 | 37.037 | 108 | 67 | 1 | 127 | 233 | 13 | 120 | 3.21e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274200 | AT1G29690.1 | 74.120 | 568 | 136 | 2 | 3 | 566 | 1 | 561 | 0.0 | 865 |
| Msa0274200 | AT4G24290.2 | 42.088 | 594 | 277 | 11 | 22 | 564 | 14 | 591 | 4.82e-146 | 434 |
| Msa0274200 | AT4G24290.3 | 42.088 | 594 | 277 | 11 | 22 | 564 | 14 | 591 | 4.82e-146 | 434 |
| Msa0274200 | AT1G28380.1 | 39.866 | 597 | 296 | 11 | 22 | 565 | 18 | 604 | 8.41e-134 | 403 |
| Msa0274200 | AT1G14780.1 | 39.060 | 617 | 300 | 12 | 19 | 565 | 9 | 619 | 2.39e-130 | 395 |
| Msa0274200 | AT4G24290.1 | 37.771 | 323 | 171 | 4 | 22 | 314 | 14 | 336 | 6.29e-67 | 221 |
Find 163 sgRNAs with CRISPR-Local
Find 472 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCCCAAACTCGAGTTATT+TGG | 0.151329 | 2_3:+5991098 | None:intergenic |
| TAAATTAACAAAACAAAATT+TGG | 0.151958 | 2_3:-5993539 | Msa0274200:CDS |
| GGTTCTGTTTGTTGCCTTCT+AGG | 0.176268 | 2_3:+5990244 | None:intergenic |
| ATCTCTTCAGTTCAGCTTAA+TGG | 0.199416 | 2_3:-5991035 | Msa0274200:CDS |
| GAGATTGAGAAGAAAATAAA+TGG | 0.207046 | 2_3:+5996024 | None:intergenic |
| TTCTCTATAACAAATGATTA+TGG | 0.217043 | 2_3:-5995975 | Msa0274200:exon |
| TTGAGCAAAGTCATATTAAA+TGG | 0.226890 | 2_3:-5991704 | Msa0274200:CDS |
| CCTGGTCATTGGTTAGTTAC+AGG | 0.228325 | 2_3:-5989730 | Msa0274200:CDS |
| TCCTCCGGACCTTGCCATTT+GGG | 0.244585 | 2_3:+5990138 | None:intergenic |
| CTCCTCCGGACCTTGCCATT+TGG | 0.248166 | 2_3:+5990137 | None:intergenic |
| TGTTGTTCCTAATGTTTCTT+TGG | 0.249610 | 2_3:-5995765 | Msa0274200:CDS |
| TTGATGTTACATCAGATATT+AGG | 0.264623 | 2_3:-5995874 | Msa0274200:CDS |
| TGAAGACCTACAGTATTTCT+TGG | 0.272397 | 2_3:-5991125 | Msa0274200:CDS |
| GAAAACCACTGACGAGAAAA+AGG | 0.281289 | 2_3:-5989830 | Msa0274200:CDS |
| CTGTTGCAGATGTAACAATA+TGG | 0.285114 | 2_3:+5992399 | None:intergenic |
| CTGGGGCCCAACTCGGCGTT+TGG | 0.286242 | 2_3:-5989999 | Msa0274200:CDS |
| AGTACATGGCGTAAAGCTTT+TGG | 0.287935 | 2_3:-5991610 | Msa0274200:CDS |
| ATGGGTGGAAACTGTAAAAT+TGG | 0.302934 | 2_3:-5991685 | Msa0274200:CDS |
| ATTTCCAAATAACTCGAGTT+TGG | 0.307852 | 2_3:-5991102 | Msa0274200:CDS |
| TTAGGCTTCTTTACTGTAAA+GGG | 0.308131 | 2_3:-5995856 | Msa0274200:CDS |
| TCTCTTCAGTTCAGCTTAAT+GGG | 0.316945 | 2_3:-5991034 | Msa0274200:CDS |
| GGCGCGCTGTTCCTTACTCT+TGG | 0.323349 | 2_3:-5993498 | Msa0274200:CDS |
| TTGCAACTCAATCCAAGCTT+TGG | 0.330570 | 2_3:-5995906 | Msa0274200:CDS |
| ATCTCGATGAGGAACATAAT+AGG | 0.337585 | 2_3:-5995811 | Msa0274200:CDS |
| GTTAATTTAACTTCGAATAG+TGG | 0.352885 | 2_3:+5993553 | None:intergenic |
| TCTGGTGTTCATATTGTCAC+TGG | 0.361807 | 2_3:-5990018 | Msa0274200:CDS |
| CTCTTGGGATCCAGCATCCT+TGG | 0.364296 | 2_3:-5993482 | Msa0274200:CDS |
| CAACTTCACTGGCTCTTCAA+TGG | 0.371767 | 2_3:-5993623 | Msa0274200:CDS |
| TTAAGGACATTGAAAATGAT+AGG | 0.374657 | 2_3:-5992301 | Msa0274200:CDS |
| GCTAAGCTTGGAGTAGAAAA+AGG | 0.376859 | 2_3:-5989706 | Msa0274200:CDS |
| TGCAACTCAATCCAAGCTTT+GGG | 0.377483 | 2_3:-5995905 | Msa0274200:CDS |
| CAATCGGTGCAGTGCTTACA+TGG | 0.380427 | 2_3:+5990070 | None:intergenic |
| CAACGGCTGTCTTGCTCCTC+CGG | 0.382643 | 2_3:+5990123 | None:intergenic |
| TTTCCAAATAACTCGAGTTT+GGG | 0.387219 | 2_3:-5991101 | Msa0274200:CDS |
| CCCATCGTTTCTCTTCTTGA+AGG | 0.389904 | 2_3:-5991633 | Msa0274200:CDS |
| CTGGTCATTGGTTAGTTACA+GGG | 0.399984 | 2_3:-5989729 | Msa0274200:CDS |
| CTGGTGTTCATATTGTCACT+GGG | 0.402777 | 2_3:-5990017 | Msa0274200:CDS |
| AATTCTATGTTCAACTTCAC+TGG | 0.404887 | 2_3:-5993634 | Msa0274200:CDS |
| CTTTACTGTAAAGGGGCACC+TGG | 0.405239 | 2_3:-5995848 | Msa0274200:CDS |
| CGCAAGATATTCCTGGTCAT+TGG | 0.407797 | 2_3:-5989741 | Msa0274200:CDS |
| AACTGAAGAGATTGACAAAC+AGG | 0.408326 | 2_3:+5991046 | None:intergenic |
| AGTTGAATTGTTGAATGAAT+AGG | 0.414435 | 2_3:+5996052 | None:intergenic |
| TTAGGAAACAATACCTGATC+TGG | 0.416102 | 2_3:+5990992 | None:intergenic |
| TCAATATCCAAAGAAACATT+AGG | 0.416962 | 2_3:+5995758 | None:intergenic |
| GGCTATTGTTTCTAGTGTGA+AGG | 0.418357 | 2_3:+5989599 | None:intergenic |
| TCTCGATGAGGAACATAATA+GGG | 0.419000 | 2_3:-5995810 | Msa0274200:CDS |
| AATGAAAGGTCAGGCATAGA+AGG | 0.419511 | 2_3:-5993679 | Msa0274200:CDS |
| TGGGGCCCAACTCGGCGTTT+GGG | 0.421506 | 2_3:-5989998 | Msa0274200:CDS |
| ATTAGGCTTCTTTACTGTAA+AGG | 0.421799 | 2_3:-5995857 | Msa0274200:CDS |
| GCAGAGACGTCGTGTATATT+AGG | 0.422089 | 2_3:-5992370 | Msa0274200:CDS |
| TTGCCATTTGGGAGCACCTA+TGG | 0.423342 | 2_3:+5990149 | None:intergenic |
| GCGCGCTGTTCCTTACTCTT+GGG | 0.436346 | 2_3:-5993497 | Msa0274200:CDS |
| CAACTCGGCGTTTGGGACTT+CGG | 0.437523 | 2_3:-5989991 | Msa0274200:CDS |
| GCGCCTGACTTCATCATTCA+AGG | 0.443883 | 2_3:+5993516 | None:intergenic |
| TCAATCCAAGCTTTGGGTCG+TGG | 0.444195 | 2_3:-5995899 | Msa0274200:CDS |
| AAATACTGTAGGTCTTCAAT+AGG | 0.446642 | 2_3:+5991130 | None:intergenic |
| TTGGTTTCAGTTATCTCAAT+CGG | 0.449176 | 2_3:+5990054 | None:intergenic |
| GAAGTCCCAAACGCCGAGTT+GGG | 0.450928 | 2_3:+5989993 | None:intergenic |
| GGACTAAGGCTGAGCCTAGA+AGG | 0.451984 | 2_3:-5990258 | Msa0274200:CDS |
| AGATAACTGAAACCAACATT+GGG | 0.454313 | 2_3:-5990047 | Msa0274200:CDS |
| AACCATGGCAAGTGATTTAG+TGG | 0.455369 | 2_3:+5993588 | None:intergenic |
| TTGGATATTGATTTCTCTCG+TGG | 0.455732 | 2_3:-5995746 | Msa0274200:CDS |
| AACTTCATGTTAATAATGTC+TGG | 0.460930 | 2_3:+5991660 | None:intergenic |
| TGTGCAGCTGCCGGAGTGGA+AGG | 0.461283 | 2_3:+5989886 | None:intergenic |
| GTAAAGGGGCACCTGGGTCT+AGG | 0.461302 | 2_3:-5995841 | Msa0274200:CDS |
| GCTTACCTAGCCAAGGATGC+TGG | 0.461481 | 2_3:+5993472 | None:intergenic |
| GACATGACAGAAATGTCAAA+AGG | 0.463117 | 2_3:-5989766 | Msa0274200:CDS |
| CTTTGTAGATTATTCTGCTC+CGG | 0.465985 | 2_3:+5991076 | None:intergenic |
| GTTGGTTTGAACCGATCAAA+TGG | 0.470890 | 2_3:-5990104 | Msa0274200:CDS |
| ACCAACATTGGGGACCTCTC+TGG | 0.475602 | 2_3:-5990036 | Msa0274200:CDS |
| AAAGGGCCGCAAGATATTCC+TGG | 0.476025 | 2_3:-5989748 | Msa0274200:CDS |
| TGGCCTTGAATGATGAAGTC+AGG | 0.476306 | 2_3:-5993519 | Msa0274200:CDS |
| ACCTTGTTGAAGTAGCTGTT+TGG | 0.478004 | 2_3:+5996079 | None:intergenic |
| TTCTAGGCTCAGCCTTAGTC+CGG | 0.478380 | 2_3:+5990260 | None:intergenic |
| GCAGAATAATCTACAAAGAA+AGG | 0.478534 | 2_3:-5991071 | Msa0274200:CDS |
| AGATTGAGAAGAAAATAAAT+GGG | 0.480489 | 2_3:+5996025 | None:intergenic |
| ATCATCTTCTTTGTCTGCAC+CGG | 0.487290 | 2_3:-5992339 | Msa0274200:CDS |
| TGCTCCCAAATGGCAAGGTC+CGG | 0.489992 | 2_3:-5990142 | Msa0274200:CDS |
| TGAGCAAAGTCATATTAAAT+GGG | 0.490628 | 2_3:-5991703 | Msa0274200:CDS |
| GGACATTGAGAACTATGTTA+AGG | 0.491242 | 2_3:-5992318 | Msa0274200:CDS |
| GCAAGCCTGTGACCGGACTA+AGG | 0.492394 | 2_3:-5990272 | Msa0274200:CDS |
| CAAAACCACGACCCAAAGCT+TGG | 0.494144 | 2_3:+5995894 | None:intergenic |
| TCTCTTCTTGAAGGAGTACA+TGG | 0.494167 | 2_3:-5991624 | Msa0274200:CDS |
| TAGCCAAGCATTCTTTGCAC+AGG | 0.494522 | 2_3:-5989581 | Msa0274200:three_prime_UTR |
| TGGCCATAGGTGCTCCCAAA+TGG | 0.497053 | 2_3:-5990152 | Msa0274200:CDS |
| TTAACATAGTTCTCAATGTC+CGG | 0.499086 | 2_3:+5992320 | None:intergenic |
| GTGCAGACAAAGAAGATGAT+TGG | 0.502238 | 2_3:+5992342 | None:intergenic |
| TTAGTTACAGGGGCTAAGCT+TGG | 0.503082 | 2_3:-5989718 | Msa0274200:CDS |
| TTCCCTGTGCAAAGAATGCT+TGG | 0.503602 | 2_3:+5989578 | None:intergenic |
| ATTGTCACTGGGGCCCAACT+CGG | 0.508327 | 2_3:-5990006 | Msa0274200:CDS |
| GAATATTTCAATGAAAGGTC+AGG | 0.511169 | 2_3:-5993688 | Msa0274200:CDS |
| CGAAGTCCCAAACGCCGAGT+TGG | 0.513349 | 2_3:+5989992 | None:intergenic |
| ATGAGCATAGTGACATTATG+AGG | 0.517711 | 2_3:-5989434 | Msa0274200:three_prime_UTR |
| TGGAAAACTCGCGAAAATTG+TGG | 0.518519 | 2_3:-5989788 | Msa0274200:CDS |
| GCTATTGTTTCTAGTGTGAA+GGG | 0.519979 | 2_3:+5989600 | None:intergenic |
| TCTGATTTGTGTGCAGCTGC+CGG | 0.524876 | 2_3:+5989877 | None:intergenic |
| TGGATATTGATTTCTCTCGT+GGG | 0.526335 | 2_3:-5995745 | Msa0274200:CDS |
| TGTTGCAGATGTAACAATAT+GGG | 0.528350 | 2_3:+5992400 | None:intergenic |
| CTCTTTGTACTTCAAAGCAG+CGG | 0.529325 | 2_3:+5992250 | None:intergenic |
| GAGAAGTTCTTCCATTTGAT+CGG | 0.529495 | 2_3:+5990093 | None:intergenic |
| GAGATAACTGAAACCAACAT+TGG | 0.530726 | 2_3:-5990048 | Msa0274200:CDS |
| CTCAGCCTTAGTCCGGTCAC+AGG | 0.530834 | 2_3:+5990267 | None:intergenic |
| ACCACATTGGGATGCACACA+TGG | 0.534167 | 2_3:-5990172 | Msa0274200:CDS |
| GTGCATCCCAATGTGGTTGG+AGG | 0.535892 | 2_3:+5990178 | None:intergenic |
| GATGCTGGATCCCAAGAGTA+AGG | 0.536433 | 2_3:+5993487 | None:intergenic |
| TGGCAGAATATTTCAATGAA+AGG | 0.536564 | 2_3:-5993693 | Msa0274200:CDS |
| GTTACATCTGCAACAGTTGG+TGG | 0.540314 | 2_3:-5992392 | Msa0274200:CDS |
| ACTAAATCACTTGCCATGGT+TGG | 0.541025 | 2_3:-5993586 | Msa0274200:CDS |
| TACTGTAGGTCTTCAATAGG+AGG | 0.541171 | 2_3:+5991133 | None:intergenic |
| GATTTCTCTCGTGGGAAAAG+TGG | 0.542981 | 2_3:-5995737 | Msa0274200:CDS |
| ACCAGAGAGGTCCCCAATGT+TGG | 0.547567 | 2_3:+5990035 | None:intergenic |
| GTTGGACGCAAGCCTGTGAC+CGG | 0.554152 | 2_3:-5990279 | Msa0274200:CDS |
| TTTAGTTGATGGTGATGCAA+TGG | 0.556791 | 2_3:-5989507 | Msa0274200:three_prime_UTR |
| TCTTTGTACTTCAAAGCAGC+GGG | 0.557262 | 2_3:+5992251 | None:intergenic |
| GGGATCCAGCATCCTTGGCT+AGG | 0.559891 | 2_3:-5993477 | Msa0274200:intron |
| AGACGGTGCTTCGTCATCAT+CGG | 0.560891 | 2_3:-5989857 | Msa0274200:CDS |
| TGTGTGCATCCCAATGTGGT+TGG | 0.562576 | 2_3:+5990175 | None:intergenic |
| TGGTCATTGGTTAGTTACAG+GGG | 0.562808 | 2_3:-5989728 | Msa0274200:CDS |
| ATTTGATCGGTTCAAACCAA+CGG | 0.563797 | 2_3:+5990106 | None:intergenic |
| TGGGATGCACACATGGCCAT+AGG | 0.574386 | 2_3:-5990165 | Msa0274200:CDS |
| CGGAGGAGCAAGACAGCCGT+TGG | 0.574725 | 2_3:-5990122 | Msa0274200:CDS |
| CCTTAGAGAAAAGTAGTTTG+AGG | 0.575804 | 2_3:+5989950 | None:intergenic |
| GAAGATAGTTCCGTCCACAT+TGG | 0.576959 | 2_3:-5989808 | Msa0274200:CDS |
| ACATGACAGAAATGTCAAAA+GGG | 0.578364 | 2_3:-5989765 | Msa0274200:CDS |
| AGCCACTAAATCACTTGCCA+TGG | 0.581549 | 2_3:-5993590 | Msa0274200:CDS |
| TTTACTGTAAAGGGGCACCT+GGG | 0.582513 | 2_3:-5995847 | Msa0274200:CDS |
| TGCTTTGAAGTACAAAGAGA+AGG | 0.585123 | 2_3:-5992246 | Msa0274200:intron |
| TCCCAAATGGCAAGGTCCGG+AGG | 0.587700 | 2_3:-5990139 | Msa0274200:CDS |
| AAAATTAGCTTACCTAGCCA+AGG | 0.588224 | 2_3:+5993465 | None:intergenic |
| CTATTGTTTCTAGTGTGAAG+GGG | 0.596042 | 2_3:+5989601 | None:intergenic |
| TAGGCTTCTTTACTGTAAAG+GGG | 0.596259 | 2_3:-5995855 | Msa0274200:CDS |
| ATTGTTACATCTGCAACAGT+TGG | 0.597254 | 2_3:-5992395 | Msa0274200:CDS |
| CACGATAAGACGGTCAGTGT+GGG | 0.598843 | 2_3:-5989917 | Msa0274200:CDS |
| TCCTTCAAGAAGAGAAACGA+TGG | 0.600405 | 2_3:+5991632 | None:intergenic |
| CCTGTAACTAACCAATGACC+AGG | 0.600926 | 2_3:+5989730 | None:intergenic |
| GCAAAGTCATATTAAATGGG+TGG | 0.601409 | 2_3:-5991700 | Msa0274200:CDS |
| AGCCAAGCATTCTTTGCACA+GGG | 0.606581 | 2_3:-5989580 | Msa0274200:three_prime_UTR |
| TATGAATCAATAGTTTAGCA+AGG | 0.610403 | 2_3:+5989657 | None:intergenic |
| TTGTCATCGCAGGTAACAGT+TGG | 0.611875 | 2_3:-5990297 | Msa0274200:intron |
| GACCGTCTTATCGTGCACCC+TGG | 0.616200 | 2_3:+5989925 | None:intergenic |
| GGAAATCCAAGAAATACTGT+AGG | 0.618343 | 2_3:+5991119 | None:intergenic |
| AATAACTCGAGTTTGGGCGC+CGG | 0.628765 | 2_3:-5991095 | Msa0274200:CDS |
| GAATTGTTGAATGAATAGGT+TGG | 0.635137 | 2_3:+5996056 | None:intergenic |
| GGATCATAACCCTTCCACTC+CGG | 0.636730 | 2_3:-5989896 | Msa0274200:CDS |
| GCACGATAAGACGGTCAGTG+TGG | 0.639402 | 2_3:-5989918 | Msa0274200:CDS |
| GTGCAGCTGCCGGAGTGGAA+GGG | 0.640888 | 2_3:+5989887 | None:intergenic |
| GCAGCTGCACACAAATCAGA+CGG | 0.644603 | 2_3:-5989874 | Msa0274200:CDS |
| ATAGGTGCTCCCAAATGGCA+AGG | 0.645874 | 2_3:-5990147 | Msa0274200:CDS |
| TACCAGGGTGCACGATAAGA+CGG | 0.647747 | 2_3:-5989927 | Msa0274200:CDS |
| AATCGGTGCAGTGCTTACAT+GGG | 0.651985 | 2_3:+5990071 | None:intergenic |
| TGGAATGAAATATCCAACCA+TGG | 0.654312 | 2_3:+5993573 | None:intergenic |
| CAATGACCAGGAATATCTTG+CGG | 0.654789 | 2_3:+5989742 | None:intergenic |
| ATAGAATTGAAGCTTCCAAG+TGG | 0.657356 | 2_3:+5993649 | None:intergenic |
| ACCAAACAGCTACTTCAACA+AGG | 0.661372 | 2_3:-5996080 | Msa0274200:five_prime_UTR |
| GCTGCAAATGAATTGCGAGT+CGG | 0.663551 | 2_3:+5990223 | None:intergenic |
| TTTGTGTGCAGCTGCCGGAG+TGG | 0.665993 | 2_3:+5989882 | None:intergenic |
| CCTTCAAGAAGAGAAACGAT+GGG | 0.671747 | 2_3:+5991633 | None:intergenic |
| GCCATGTGTGCATCCCAATG+TGG | 0.674737 | 2_3:+5990171 | None:intergenic |
| AGATGAACAAGCCTAGACCC+AGG | 0.692616 | 2_3:+5995830 | None:intergenic |
| TGGTGTTCATATTGTCACTG+GGG | 0.695069 | 2_3:-5990016 | Msa0274200:CDS |
| TAGGCTTGTTCATCTCGATG+AGG | 0.698566 | 2_3:-5995822 | Msa0274200:CDS |
| GATAACTGAAACCAACATTG+GGG | 0.738432 | 2_3:-5990046 | Msa0274200:CDS |
| TGACAATATGAACACCAGAG+AGG | 0.757497 | 2_3:+5990022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATTTTATTTGTGTA+TGG | - | chr2_3:5990024-5990043 | Msa0274200:CDS | 10.0% |
| !!! | AAATTTTTAAAAAAGCAATT+GGG | + | chr2_3:5991578-5991597 | None:intergenic | 10.0% |
| !!! | AAAATTTTTAAAAAAGCAAT+TGG | + | chr2_3:5991579-5991598 | None:intergenic | 10.0% |
| !! | TAAATTAACAAAACAAAATT+TGG | - | chr2_3:5991982-5992001 | Msa0274200:intron | 10.0% |
| !! | AAAAAAAAAACAAATTCAAA+GGG | + | chr2_3:5995900-5995919 | None:intergenic | 10.0% |
| !!! | ATTAAATTTTGTTGATTTAA+TGG | - | chr2_3:5996061-5996080 | Msa0274200:five_prime_UTR | 10.0% |
| !! | TCCAATATAAAAAGTTAATA+TGG | - | chr2_3:5990253-5990272 | Msa0274200:CDS | 15.0% |
| !!! | ACCATATTAACTTTTTATAT+TGG | + | chr2_3:5990257-5990276 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAGGAATTTTAG+TGG | + | chr2_3:5992265-5992284 | None:intergenic | 15.0% |
| !! | AAAAAATAAGATTAAGAATC+TGG | + | chr2_3:5992787-5992806 | None:intergenic | 15.0% |
| !!! | AAAAGAGTTTTTTTTTTTGA+GGG | - | chr2_3:5992975-5992994 | Msa0274200:intron | 15.0% |
| !! | TACAAATTCATATAATAACT+GGG | + | chr2_3:5994189-5994208 | None:intergenic | 15.0% |
| !! | TGTTAAATATAGTAGAATTT+AGG | + | chr2_3:5994550-5994569 | None:intergenic | 15.0% |
| !! | AAATTCTACTATATTTAACA+TGG | - | chr2_3:5994550-5994569 | Msa0274200:intron | 15.0% |
| !!! | ATTACAAGTTTTATTTGAAT+TGG | - | chr2_3:5994755-5994774 | Msa0274200:intron | 15.0% |
| !! | GAAAAAAAAAACAAATTCAA+AGG | + | chr2_3:5995901-5995920 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTTATTTAGTTGA+TGG | - | chr2_3:5996003-5996022 | Msa0274200:five_prime_UTR | 15.0% |
| !! | AGATTGAGAAGAAAATAAAT+GGG | + | chr2_3:5989499-5989518 | None:intergenic | 20.0% |
| !!! | CAAAAAAGTTCAGTTTTTTA+TGG | + | chr2_3:5989525-5989544 | None:intergenic | 20.0% |
| !! | TTCTCTATAACAAATGATTA+TGG | - | chr2_3:5989546-5989565 | Msa0274200:three_prime_UTR | 20.0% |
| !!! | TATTTTATTTGTGTATGGAT+TGG | - | chr2_3:5990029-5990048 | Msa0274200:CDS | 20.0% |
| !! | ATTAGATGAGATAATATGAA+TGG | - | chr2_3:5990538-5990557 | Msa0274200:intron | 20.0% |
| !!! | TTTTAGCATATTAATTCCTT+TGG | - | chr2_3:5990561-5990580 | Msa0274200:intron | 20.0% |
| !! | TTTAGCATATTAATTCCTTT+GGG | - | chr2_3:5990562-5990581 | Msa0274200:intron | 20.0% |
| !! | CTTCTTAAAATTACAAAACA+TGG | - | chr2_3:5991011-5991030 | Msa0274200:CDS | 20.0% |
| !!! | TTCAAATTTTATGTCAACAT+TGG | + | chr2_3:5991356-5991375 | None:intergenic | 20.0% |
| !!! | TGAACTTGTAAAAATGATTT+TGG | - | chr2_3:5991372-5991391 | Msa0274200:intron | 20.0% |
| !! | TGATTTCAAAACAAATAGAT+AGG | + | chr2_3:5991427-5991446 | None:intergenic | 20.0% |
| !! | TATATATCTTCAATCAAATG+AGG | + | chr2_3:5991744-5991763 | None:intergenic | 20.0% |
| !! | ACACTTAAGATATAATATCA+TGG | - | chr2_3:5992181-5992200 | Msa0274200:intron | 20.0% |
| !!! | ATTTTAGTGGTTAATTTGTT+AGG | + | chr2_3:5992252-5992271 | None:intergenic | 20.0% |
| !!! | GCTGAAATTACTTTTTTTAT+AGG | + | chr2_3:5992276-5992295 | None:intergenic | 20.0% |
| !! | TTAATTAGTTAAACAACACA+AGG | + | chr2_3:5992428-5992447 | None:intergenic | 20.0% |
| !!! | TTTGAAAAGCTCTTTATTTT+AGG | + | chr2_3:5992584-5992603 | None:intergenic | 20.0% |
| !!! | TATTTTGATGATAACACAAA+AGG | - | chr2_3:5992650-5992669 | Msa0274200:intron | 20.0% |
| !!! | TTTTCTTTTGAGATTTTAAG+GGG | + | chr2_3:5992959-5992978 | None:intergenic | 20.0% |
| !!! | CTTTTCTTTTGAGATTTTAA+GGG | + | chr2_3:5992960-5992979 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTTGAGATTTTA+AGG | + | chr2_3:5992961-5992980 | None:intergenic | 20.0% |
| !!! | GAAAAGAGTTTTTTTTTTTG+AGG | - | chr2_3:5992974-5992993 | Msa0274200:intron | 20.0% |
| !!! | AAAGAGTTTTTTTTTTTGAG+GGG | - | chr2_3:5992976-5992995 | Msa0274200:intron | 20.0% |
| !!! | ATTCTATTTGCTAGTTTATA+TGG | - | chr2_3:5993034-5993053 | Msa0274200:intron | 20.0% |
| !!! | TTGTATATTTTCACAGTAAT+GGG | + | chr2_3:5993324-5993343 | None:intergenic | 20.0% |
| !! | TTCTGATTATTAATGAAACT+TGG | - | chr2_3:5993354-5993373 | Msa0274200:intron | 20.0% |
| !! | CTACAAATTCATATAATAAC+TGG | + | chr2_3:5994190-5994209 | None:intergenic | 20.0% |
| !! | CAGTTATTATATGAATTTGT+AGG | - | chr2_3:5994188-5994207 | Msa0274200:intron | 20.0% |
| !! | TTTGTCTGTTTAATATAAGA+GGG | + | chr2_3:5994368-5994387 | None:intergenic | 20.0% |
| !! | ATATCAGATTATGTCAAAAA+AGG | - | chr2_3:5994573-5994592 | Msa0274200:intron | 20.0% |
| !! | ACTCAAAGTTAAATGAATTA+TGG | - | chr2_3:5994713-5994732 | Msa0274200:intron | 20.0% |
| !! | AAAGTTAAATGAATTATGGT+AGG | - | chr2_3:5994717-5994736 | Msa0274200:intron | 20.0% |
| !! | AAGTTAAATGAATTATGGTA+GGG | - | chr2_3:5994718-5994737 | Msa0274200:intron | 20.0% |
| !! | ATAGACTATAGATTATAACT+TGG | - | chr2_3:5995063-5995082 | Msa0274200:intron | 20.0% |
| ! | AGTTGAATTGTTGAATGAAT+AGG | + | chr2_3:5989472-5989491 | None:intergenic | 25.0% |
| ! | GAGATTGAGAAGAAAATAAA+TGG | + | chr2_3:5989500-5989519 | None:intergenic | 25.0% |
| ! | TTGATGTTACATCAGATATT+AGG | - | chr2_3:5989647-5989666 | Msa0274200:exon | 25.0% |
| ! | TCAATATCCAAAGAAACATT+AGG | + | chr2_3:5989766-5989785 | None:intergenic | 25.0% |
| !! | AAGATAAAATAAAGCCTTGT+TGG | + | chr2_3:5990842-5990861 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCACACAAAAGAA+AGG | + | chr2_3:5990923-5990942 | None:intergenic | 25.0% |
| ! | AATCAGTCTCTTAGAATTTA+TGG | - | chr2_3:5991442-5991461 | Msa0274200:intron | 25.0% |
| !!! | TTTTTAAAAAAGCAATTGGG+CGG | + | chr2_3:5991575-5991594 | None:intergenic | 25.0% |
| !! | GTTAATTTAACTTCGAATAG+TGG | + | chr2_3:5991971-5991990 | None:intergenic | 25.0% |
| ! | ATATATAGCAGTTTATGTTC+TGG | - | chr2_3:5992318-5992337 | Msa0274200:CDS | 25.0% |
| ! | TTCACAAAGAAATATTCAAG+GGG | + | chr2_3:5992485-5992504 | None:intergenic | 25.0% |
| ! | CTTCACAAAGAAATATTCAA+GGG | + | chr2_3:5992486-5992505 | None:intergenic | 25.0% |
| ! | ACTTCACAAAGAAATATTCA+AGG | + | chr2_3:5992487-5992506 | None:intergenic | 25.0% |
| !! | TCATCCTTTTTATTCTTCTT+AGG | - | chr2_3:5992551-5992570 | Msa0274200:intron | 25.0% |
| ! | GTTTCCTAAGAAGAATAAAA+AGG | + | chr2_3:5992558-5992577 | None:intergenic | 25.0% |
| !!! | CTCAGTTTTATTGAGAATTA+TGG | - | chr2_3:5993096-5993115 | Msa0274200:intron | 25.0% |
| ! | TTAAGGACATTGAAAATGAT+AGG | - | chr2_3:5993220-5993239 | Msa0274200:intron | 25.0% |
| !! | TGTATATTTTCACAGTAATG+GGG | + | chr2_3:5993323-5993342 | None:intergenic | 25.0% |
| !! | GTTGTATATTTTCACAGTAA+TGG | + | chr2_3:5993325-5993344 | None:intergenic | 25.0% |
| ! | TTAATAATCAGAAGCAGAAA+AGG | + | chr2_3:5993347-5993366 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr2_3:5993449-5993468 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr2_3:5993450-5993469 | None:intergenic | 25.0% |
| !! | AACATTTTCTATTGTCAGTT+TGG | + | chr2_3:5993682-5993701 | None:intergenic | 25.0% |
| ! | TTGAGCAAAGTCATATTAAA+TGG | - | chr2_3:5993817-5993836 | Msa0274200:intron | 25.0% |
| ! | TGAGCAAAGTCATATTAAAT+GGG | - | chr2_3:5993818-5993837 | Msa0274200:intron | 25.0% |
| ! | AACTTCATGTTAATAATGTC+TGG | + | chr2_3:5993864-5993883 | None:intergenic | 25.0% |
| ! | TGATATTATAACTGATCCTA+GGG | + | chr2_3:5994049-5994068 | None:intergenic | 25.0% |
| ! | ATGATATTATAACTGATCCT+AGG | + | chr2_3:5994050-5994069 | None:intergenic | 25.0% |
| ! | TATAAACTGCAATATCAATC+AGG | - | chr2_3:5994081-5994100 | Msa0274200:intron | 25.0% |
| ! | AACTTTATGAATTTACGATG+AGG | - | chr2_3:5994125-5994144 | Msa0274200:intron | 25.0% |
| ! | GAATTTGTAGGAAAAAGTTA+TGG | - | chr2_3:5994200-5994219 | Msa0274200:intron | 25.0% |
| ! | TTGTCTGTTTAATATAAGAG+GGG | + | chr2_3:5994367-5994386 | None:intergenic | 25.0% |
| ! | GTTTGTCTGTTTAATATAAG+AGG | + | chr2_3:5994369-5994388 | None:intergenic | 25.0% |
| !! | GATTTTCAACAATAAGACAT+AGG | + | chr2_3:5994793-5994812 | None:intergenic | 25.0% |
| ! | CTGGTAGTAATTTAAGAAAA+TGG | - | chr2_3:5994886-5994905 | Msa0274200:intron | 25.0% |
| !!! | TTTGAGGTGTAATACATTTT+TGG | + | chr2_3:5995558-5995577 | None:intergenic | 25.0% |
| ! | AAAAAGGAAAAATTGTACTC+AGG | - | chr2_3:5995831-5995850 | Msa0274200:CDS | 25.0% |
| ! | TATGAATCAATAGTTTAGCA+AGG | + | chr2_3:5995867-5995886 | None:intergenic | 25.0% |
| ! | AAAAAAACAAATTCAAAGGG+AGG | + | chr2_3:5995897-5995916 | None:intergenic | 25.0% |
| GAATTGTTGAATGAATAGGT+TGG | + | chr2_3:5989468-5989487 | None:intergenic | 30.0% | |
| ATTAGGCTTCTTTACTGTAA+AGG | - | chr2_3:5989664-5989683 | Msa0274200:CDS | 30.0% | |
| TTAGGCTTCTTTACTGTAAA+GGG | - | chr2_3:5989665-5989684 | Msa0274200:CDS | 30.0% | |
| TGTTGTTCCTAATGTTTCTT+TGG | - | chr2_3:5989756-5989775 | Msa0274200:CDS | 30.0% | |
| ! | CTTTTCAAAACTACAAACAG+GGG | + | chr2_3:5989821-5989840 | None:intergenic | 30.0% |
| ! | CCTTTTCAAAACTACAAACA+GGG | + | chr2_3:5989822-5989841 | None:intergenic | 30.0% |
| ! | ACCTTTTCAAAACTACAAAC+AGG | + | chr2_3:5989823-5989842 | None:intergenic | 30.0% |
| !! | AAATGGCCAAGTATTGAATT+AGG | + | chr2_3:5990098-5990117 | None:intergenic | 30.0% |
| CAAATCCTTACCTTACAAAT+CGG | - | chr2_3:5990434-5990453 | Msa0274200:intron | 30.0% | |
| ATCACATTGTTGATGTTGTA+AGG | - | chr2_3:5990500-5990519 | Msa0274200:intron | 30.0% | |
| ATTGTTGATGTTGTAAGGAA+TGG | - | chr2_3:5990505-5990524 | Msa0274200:intron | 30.0% | |
| CATATGATATGAGAGATAAC+TGG | + | chr2_3:5990621-5990640 | None:intergenic | 30.0% | |
| !! | TTTTCTTTTTGGCATAGGAT+TGG | - | chr2_3:5990658-5990677 | Msa0274200:intron | 30.0% |
| CATGCACTTTAAATTGCAAT+AGG | + | chr2_3:5990684-5990703 | None:intergenic | 30.0% | |
| ACTTACAGTGGTTATGTTAT+TGG | - | chr2_3:5990892-5990911 | Msa0274200:intron | 30.0% | |
| !! | TCATAGTATCTTAGCTCTAA+AGG | - | chr2_3:5990946-5990965 | Msa0274200:intron | 30.0% |
| ATAGTTTAGATGTGTGTGAT+TGG | - | chr2_3:5991107-5991126 | Msa0274200:CDS | 30.0% | |
| ATAGTATCAGAGAAAGACAT+AGG | + | chr2_3:5991288-5991307 | None:intergenic | 30.0% | |
| AGTCTCTTAGAATTTATGGT+TGG | - | chr2_3:5991446-5991465 | Msa0274200:intron | 30.0% | |
| GTCTCTTAGAATTTATGGTT+GGG | - | chr2_3:5991447-5991466 | Msa0274200:intron | 30.0% | |
| !! | TGACGACTAAATTTTTCAGA+TGG | - | chr2_3:5991808-5991827 | Msa0274200:intron | 30.0% |
| TGGCAGAATATTTCAATGAA+AGG | - | chr2_3:5991828-5991847 | Msa0274200:intron | 30.0% | |
| GAATATTTCAATGAAAGGTC+AGG | - | chr2_3:5991833-5991852 | Msa0274200:intron | 30.0% | |
| ATAGAAGGAAAAATTCCACT+TGG | - | chr2_3:5991857-5991876 | Msa0274200:intron | 30.0% | |
| AATTCTATGTTCAACTTCAC+TGG | - | chr2_3:5991887-5991906 | Msa0274200:intron | 30.0% | |
| ! | CTTTCTGCAGAAAATGATTT+TGG | - | chr2_3:5992105-5992124 | Msa0274200:intron | 30.0% |
| GCATAAAATCTAAGAACATC+AGG | + | chr2_3:5992131-5992150 | None:intergenic | 30.0% | |
| !! | TTAGTGGTTAATTTGTTAGG+AGG | + | chr2_3:5992249-5992268 | None:intergenic | 30.0% |
| ! | TTTATGTTCTGGATTAGAAG+TGG | - | chr2_3:5992329-5992348 | Msa0274200:CDS | 30.0% |
| !! | TTGAGATTTTAAGGGGAAAT+GGG | + | chr2_3:5992952-5992971 | None:intergenic | 30.0% |
| !! | TTTGAGATTTTAAGGGGAAA+TGG | + | chr2_3:5992953-5992972 | None:intergenic | 30.0% |
| TCAATAAAACTGAGAAGCAA+GGG | + | chr2_3:5993090-5993109 | None:intergenic | 30.0% | |
| TGTTGCAGATGTAACAATAT+GGG | + | chr2_3:5993124-5993143 | None:intergenic | 30.0% | |
| TTAACATAGTTCTCAATGTC+CGG | + | chr2_3:5993204-5993223 | None:intergenic | 30.0% | |
| GAGAAGGTTAGTATTAAGAA+TGG | - | chr2_3:5993291-5993310 | Msa0274200:intron | 30.0% | |
| !!! | ACAGTCATTTTTAGAAGAAG+AGG | - | chr2_3:5993783-5993802 | Msa0274200:intron | 30.0% |
| !! | TCATTTTTAGAAGAAGAGGA+GGG | - | chr2_3:5993787-5993806 | Msa0274200:intron | 30.0% |
| !! | CTATTTCATGAGTTGTTTTC+AGG | + | chr2_3:5994233-5994252 | None:intergenic | 30.0% |
| CTGAAAACAACTCATGAAAT+AGG | - | chr2_3:5994231-5994250 | Msa0274200:intron | 30.0% | |
| AAGAAATTGAGCTTGAAAAC+TGG | - | chr2_3:5994264-5994283 | Msa0274200:intron | 30.0% | |
| AGAAATTGAGCTTGAAAACT+GGG | - | chr2_3:5994265-5994284 | Msa0274200:intron | 30.0% | |
| ATACTAGACATGACAATTTC+TGG | - | chr2_3:5994294-5994313 | Msa0274200:intron | 30.0% | |
| AAATACTGTAGGTCTTCAAT+AGG | + | chr2_3:5994394-5994413 | None:intergenic | 30.0% | |
| ATTTCCAAATAACTCGAGTT+TGG | - | chr2_3:5994419-5994438 | Msa0274200:intron | 30.0% | |
| TTTCCAAATAACTCGAGTTT+GGG | - | chr2_3:5994420-5994439 | Msa0274200:intron | 30.0% | |
| GCAGAATAATCTACAAAGAA+AGG | - | chr2_3:5994450-5994469 | Msa0274200:intron | 30.0% | |
| ATAAACACATGAGTCAGTAT+CGG | - | chr2_3:5994921-5994940 | Msa0274200:intron | 30.0% | |
| TGTAGCAAATGTGATAAATG+TGG | + | chr2_3:5995122-5995141 | None:intergenic | 30.0% | |
| TTGGTTTCAGTTATCTCAAT+CGG | + | chr2_3:5995470-5995489 | None:intergenic | 30.0% | |
| AGATAACTGAAACCAACATT+GGG | - | chr2_3:5995474-5995493 | Msa0274200:intron | 30.0% | |
| ACATGACAGAAATGTCAAAA+GGG | - | chr2_3:5995756-5995775 | Msa0274200:CDS | 30.0% | |
| TAGGCTTCTTTACTGTAAAG+GGG | - | chr2_3:5989666-5989685 | Msa0274200:CDS | 35.0% | |
| ATCTCGATGAGGAACATAAT+AGG | - | chr2_3:5989710-5989729 | Msa0274200:CDS | 35.0% | |
| TCTCGATGAGGAACATAATA+GGG | - | chr2_3:5989711-5989730 | Msa0274200:CDS | 35.0% | |
| !! | TTGGATATTGATTTCTCTCG+TGG | - | chr2_3:5989775-5989794 | Msa0274200:CDS | 35.0% |
| !! | TGGATATTGATTTCTCTCGT+GGG | - | chr2_3:5989776-5989795 | Msa0274200:CDS | 35.0% |
| !!! | CCCTGTTTGTAGTTTTGAAA+AGG | - | chr2_3:5989819-5989838 | Msa0274200:CDS | 35.0% |
| TTGAGAAGTGAATATCTCAC+AGG | - | chr2_3:5989886-5989905 | Msa0274200:CDS | 35.0% | |
| GCATTGCCTAATTCAATACT+TGG | - | chr2_3:5990089-5990108 | Msa0274200:CDS | 35.0% | |
| ! | CCTTTAGAAGATGCAATGAA+CGG | + | chr2_3:5990121-5990140 | None:intergenic | 35.0% |
| CGTTCATTGCATCTTCTAAA+GGG | - | chr2_3:5990119-5990138 | Msa0274200:CDS | 35.0% | |
| AATCCTCAATACTTGGATGA+AGG | - | chr2_3:5990205-5990224 | Msa0274200:CDS | 35.0% | |
| ! | AAACCTTCATCCAAGTATTG+AGG | + | chr2_3:5990211-5990230 | None:intergenic | 35.0% |
| !! | CAAAACCGATTTGTAAGGTA+AGG | + | chr2_3:5990442-5990461 | None:intergenic | 35.0% |
| !! | CCTAACAAAACCGATTTGTA+AGG | + | chr2_3:5990447-5990466 | None:intergenic | 35.0% |
| !!! | CCTTACAAATCGGTTTTGTT+AGG | - | chr2_3:5990444-5990463 | Msa0274200:intron | 35.0% |
| ACTCCAATTTCAGGAAACTA+GGG | + | chr2_3:5990589-5990608 | None:intergenic | 35.0% | |
| AACTCCAATTTCAGGAAACT+AGG | + | chr2_3:5990590-5990609 | None:intergenic | 35.0% | |
| TAGTTTCCTGAAATTGGAGT+TGG | - | chr2_3:5990589-5990608 | Msa0274200:intron | 35.0% | |
| AATCATCCAACTCCAATTTC+AGG | + | chr2_3:5990598-5990617 | None:intergenic | 35.0% | |
| ! | CTCAAGCTGCATTTTCTTTT+TGG | - | chr2_3:5990647-5990666 | Msa0274200:intron | 35.0% |
| !! | CTGCATTTTCTTTTTGGCAT+AGG | - | chr2_3:5990653-5990672 | Msa0274200:intron | 35.0% |
| AACAAACTCTGTCATGGTAA+AGG | - | chr2_3:5990705-5990724 | Msa0274200:intron | 35.0% | |
| !! | GTAAAGGTGCAAATTGGTTT+TGG | - | chr2_3:5990721-5990740 | Msa0274200:intron | 35.0% |
| ! | TGATTTATCTAGCTCCAACA+AGG | - | chr2_3:5990825-5990844 | Msa0274200:intron | 35.0% |
| ACTGTAAGTAGACACTTTGT+TGG | + | chr2_3:5990881-5990900 | None:intergenic | 35.0% | |
| ! | AACAAAGTGTCTACTTACAG+TGG | - | chr2_3:5990880-5990899 | Msa0274200:intron | 35.0% |
| !! | TAGCTCTAAAGGATGTTGAA+AGG | - | chr2_3:5990957-5990976 | Msa0274200:intron | 35.0% |
| ATTAGAGAATCTTCCATGGT+TGG | - | chr2_3:5990981-5991000 | Msa0274200:intron | 35.0% | |
| AAGAAGAATTTAGCCAACCA+TGG | + | chr2_3:5990997-5991016 | None:intergenic | 35.0% | |
| CATGATAATAAGTCGAAGAG+TGG | - | chr2_3:5991049-5991068 | Msa0274200:CDS | 35.0% | |
| GCGAATCATTGGAAAATGTA+GGG | - | chr2_3:5991076-5991095 | Msa0274200:CDS | 35.0% | |
| TATTGTCAAAGTTACTTCCG+AGG | - | chr2_3:5991142-5991161 | Msa0274200:intron | 35.0% | |
| ! | TTTGTTGTCATGTGACTGAA+AGG | - | chr2_3:5991188-5991207 | Msa0274200:intron | 35.0% |
| !!! | GGGAACTATGGTTAGTTTTA+TGG | - | chr2_3:5991242-5991261 | Msa0274200:intron | 35.0% |
| ATAGAATTGAAGCTTCCAAG+TGG | + | chr2_3:5991875-5991894 | None:intergenic | 35.0% | |
| TGGAATGAAATATCCAACCA+TGG | + | chr2_3:5991951-5991970 | None:intergenic | 35.0% | |
| ! | AAAATTAGCTTACCTAGCCA+AGG | + | chr2_3:5992059-5992078 | None:intergenic | 35.0% |
| CACAGAGTCTACTTCTAAAT+TGG | - | chr2_3:5992155-5992174 | Msa0274200:intron | 35.0% | |
| !! | GGGGAAATTTGTTAACAACA+GGG | + | chr2_3:5992225-5992244 | None:intergenic | 35.0% |
| !! | AGGGGAAATTTGTTAACAAC+AGG | + | chr2_3:5992226-5992245 | None:intergenic | 35.0% |
| !! | TGGTTAATTTGTTAGGAGGA+GGG | + | chr2_3:5992245-5992264 | None:intergenic | 35.0% |
| ACTAAGAGTTATAGAGTCTC+AGG | - | chr2_3:5992509-5992528 | Msa0274200:intron | 35.0% | |
| GAACAATTCAGACAAAGTTG+TGG | + | chr2_3:5992617-5992636 | None:intergenic | 35.0% | |
| CAACTTTGTCTGAATTGTTC+AGG | - | chr2_3:5992617-5992636 | Msa0274200:intron | 35.0% | |
| CTTACGCATCTAAAAGACAA+TGG | - | chr2_3:5992839-5992858 | Msa0274200:intron | 35.0% | |
| TGGGATCAATCAACTTAAGT+CGG | + | chr2_3:5992922-5992941 | None:intergenic | 35.0% | |
| AGGGGAAATGGGAAAAAAAT+GGG | + | chr2_3:5992941-5992960 | None:intergenic | 35.0% | |
| AAGGGGAAATGGGAAAAAAA+TGG | + | chr2_3:5992942-5992961 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTTTTTGAGGGGAG+AGG | - | chr2_3:5992981-5993000 | Msa0274200:intron | 35.0% |
| CTCAATAAAACTGAGAAGCA+AGG | + | chr2_3:5993091-5993110 | None:intergenic | 35.0% | |
| CTGTTGCAGATGTAACAATA+TGG | + | chr2_3:5993125-5993144 | None:intergenic | 35.0% | |
| ATTGTTACATCTGCAACAGT+TGG | - | chr2_3:5993126-5993145 | Msa0274200:intron | 35.0% | |
| GGACATTGAGAACTATGTTA+AGG | - | chr2_3:5993203-5993222 | Msa0274200:intron | 35.0% | |
| CTTGATGCAAAAAACACATC+AGG | - | chr2_3:5993246-5993265 | Msa0274200:intron | 35.0% | |
| !! | TGCTTTGAAGTACAAAGAGA+AGG | - | chr2_3:5993275-5993294 | Msa0274200:intron | 35.0% |
| !! | TAGCCTTGTGCATTTATTTC+TGG | - | chr2_3:5993404-5993423 | Msa0274200:intron | 35.0% |
| TTGCCAGAAATAAATGCACA+AGG | + | chr2_3:5993410-5993429 | None:intergenic | 35.0% | |
| TATCTACTGACATATGCACT+TGG | + | chr2_3:5993642-5993661 | None:intergenic | 35.0% | |
| ! | TCTTTTCATTATGTCACTGC+AGG | - | chr2_3:5993755-5993774 | Msa0274200:intron | 35.0% |
| !!! | GTCATTTTTAGAAGAAGAGG+AGG | - | chr2_3:5993786-5993805 | Msa0274200:intron | 35.0% |
| !! | CATTTTTAGAAGAAGAGGAG+GGG | - | chr2_3:5993788-5993807 | Msa0274200:intron | 35.0% |
| GCAAAGTCATATTAAATGGG+TGG | - | chr2_3:5993821-5993840 | Msa0274200:intron | 35.0% | |
| ATGGGTGGAAACTGTAAAAT+TGG | - | chr2_3:5993836-5993855 | Msa0274200:intron | 35.0% | |
| AACTTTGCAGCAATAGTGAT+TGG | + | chr2_3:5993976-5993995 | None:intergenic | 35.0% | |
| ! | AAAGTTGATCTTGTTACCTC+TGG | - | chr2_3:5993990-5994009 | Msa0274200:intron | 35.0% |
| TAAATGTCAGCTGCATGTTT+AGG | - | chr2_3:5994160-5994179 | Msa0274200:intron | 35.0% | |
| AAATGTCAGCTGCATGTTTA+GGG | - | chr2_3:5994161-5994180 | Msa0274200:intron | 35.0% | |
| TGAAGACCTACAGTATTTCT+TGG | - | chr2_3:5994396-5994415 | Msa0274200:intron | 35.0% | |
| GGAAATCCAAGAAATACTGT+AGG | + | chr2_3:5994405-5994424 | None:intergenic | 35.0% | |
| CTTTGTAGATTATTCTGCTC+CGG | + | chr2_3:5994448-5994467 | None:intergenic | 35.0% | |
| AACTGAAGAGATTGACAAAC+AGG | + | chr2_3:5994478-5994497 | None:intergenic | 35.0% | |
| ATCTCTTCAGTTCAGCTTAA+TGG | - | chr2_3:5994486-5994505 | Msa0274200:intron | 35.0% | |
| TCTCTTCAGTTCAGCTTAAT+GGG | - | chr2_3:5994487-5994506 | Msa0274200:intron | 35.0% | |
| TTAGGAAACAATACCTGATC+TGG | + | chr2_3:5994532-5994551 | None:intergenic | 35.0% | |
| !! | GATTTTTCAGAAACCTCAGA+CGG | - | chr2_3:5994679-5994698 | Msa0274200:intron | 35.0% |
| CTATGTGTTAGAGTTGTGTT+TGG | + | chr2_3:5994863-5994882 | None:intergenic | 35.0% | |
| ! | GCATTGATACTTGAGATTGA+AGG | + | chr2_3:5994959-5994978 | None:intergenic | 35.0% |
| ! | CTCCTATTTTATCTGTGCAT+CGG | + | chr2_3:5994992-5995011 | None:intergenic | 35.0% |
| GATGCACAGATAAAATAGGA+GGG | - | chr2_3:5994991-5995010 | Msa0274200:intron | 35.0% | |
| ! | TAGTTTGTGTAGTTGAGTTC+AGG | - | chr2_3:5995094-5995113 | Msa0274200:intron | 35.0% |
| ! | ATTTGATCGGTTCAAACCAA+CGG | + | chr2_3:5995418-5995437 | None:intergenic | 35.0% |
| GAGAAGTTCTTCCATTTGAT+CGG | + | chr2_3:5995431-5995450 | None:intergenic | 35.0% | |
| GAGATAACTGAAACCAACAT+TGG | - | chr2_3:5995473-5995492 | Msa0274200:intron | 35.0% | |
| GATAACTGAAACCAACATTG+GGG | - | chr2_3:5995475-5995494 | Msa0274200:intron | 35.0% | |
| CCTTAGAGAAAAGTAGTTTG+AGG | + | chr2_3:5995574-5995593 | None:intergenic | 35.0% | |
| !! | CCTCAAACTACTTTTCTCTA+AGG | - | chr2_3:5995571-5995590 | Msa0274200:intron | 35.0% |
| !!! | TACTTTTCTCTAAGGTACCA+GGG | - | chr2_3:5995579-5995598 | Msa0274200:intron | 35.0% |
| GACATGACAGAAATGTCAAA+AGG | - | chr2_3:5995755-5995774 | Msa0274200:CDS | 35.0% | |
| !! | CTATTGTTTCTAGTGTGAAG+GGG | + | chr2_3:5995923-5995942 | None:intergenic | 35.0% |
| !! | GCTATTGTTTCTAGTGTGAA+GGG | + | chr2_3:5995924-5995943 | None:intergenic | 35.0% |
| !! | TTTAGTTGATGGTGATGCAA+TGG | - | chr2_3:5996014-5996033 | Msa0274200:five_prime_UTR | 35.0% |
| ATGAGCATAGTGACATTATG+AGG | - | chr2_3:5996087-5996106 | Msa0274200:five_prime_UTR | 35.0% | |
| ACCAAACAGCTACTTCAACA+AGG | - | chr2_3:5989441-5989460 | Msa0274200:three_prime_UTR | 40.0% | |
| ACCTTGTTGAAGTAGCTGTT+TGG | + | chr2_3:5989445-5989464 | None:intergenic | 40.0% | |
| TTGCAACTCAATCCAAGCTT+TGG | - | chr2_3:5989615-5989634 | Msa0274200:three_prime_UTR | 40.0% | |
| TGCAACTCAATCCAAGCTTT+GGG | - | chr2_3:5989616-5989635 | Msa0274200:three_prime_UTR | 40.0% | |
| GAAGTGAATATCTCACAGGA+AGG | - | chr2_3:5989890-5989909 | Msa0274200:CDS | 40.0% | |
| GAAGATGCAATGAACGGAAA+TGG | + | chr2_3:5990115-5990134 | None:intergenic | 40.0% | |
| CCGTTCATTGCATCTTCTAA+AGG | - | chr2_3:5990118-5990137 | Msa0274200:CDS | 40.0% | |
| CATGTTAAGAGTCCCACAAT+TGG | - | chr2_3:5990148-5990167 | Msa0274200:CDS | 40.0% | |
| TCAGACCATCATCCAATTGT+GGG | + | chr2_3:5990163-5990182 | None:intergenic | 40.0% | |
| TTCAGACCATCATCCAATTG+TGG | + | chr2_3:5990164-5990183 | None:intergenic | 40.0% | |
| ! | ATTGGATGATGGTCTGAACA+TGG | - | chr2_3:5990166-5990185 | Msa0274200:CDS | 40.0% |
| ! | TTGGATGATGGTCTGAACAT+GGG | - | chr2_3:5990167-5990186 | Msa0274200:CDS | 40.0% |
| TGAACATGGGTTTATCAGTG+AGG | - | chr2_3:5990180-5990199 | Msa0274200:CDS | 40.0% | |
| GAACATGGGTTTATCAGTGA+GGG | - | chr2_3:5990181-5990200 | Msa0274200:CDS | 40.0% | |
| GTGTGTTAAGAGTCCTACAT+TGG | - | chr2_3:5990375-5990394 | Msa0274200:intron | 40.0% | |
| GTCCTACATTGGATGAGTTA+TGG | - | chr2_3:5990386-5990405 | Msa0274200:intron | 40.0% | |
| AGCCATAACTCATCCAATGT+AGG | + | chr2_3:5990391-5990410 | None:intergenic | 40.0% | |
| ! | ATGAGTTATGGCTTGCACAT+GGG | - | chr2_3:5990398-5990417 | Msa0274200:intron | 40.0% |
| TGCACATGGGTTTATAAGTG+AGG | - | chr2_3:5990411-5990430 | Msa0274200:intron | 40.0% | |
| ! | GTCATGGTAAAGGTGCAAAT+TGG | - | chr2_3:5990715-5990734 | Msa0274200:intron | 40.0% |
| TGGTCAAGCAGAACATTATC+AGG | - | chr2_3:5990741-5990760 | Msa0274200:intron | 40.0% | |
| GGTCAAGCAGAACATTATCA+GGG | - | chr2_3:5990742-5990761 | Msa0274200:intron | 40.0% | |
| CAGAACATTATCAGGGAGTT+TGG | - | chr2_3:5990749-5990768 | Msa0274200:intron | 40.0% | |
| CATTCAGAGCTTGACAAGTA+AGG | + | chr2_3:5990785-5990804 | None:intergenic | 40.0% | |
| AGGCATTAGAGAATCTTCCA+TGG | - | chr2_3:5990977-5990996 | Msa0274200:intron | 40.0% | |
| TAATAAGTCGAAGAGTGGTG+TGG | - | chr2_3:5991054-5991073 | Msa0274200:CDS | 40.0% | |
| GGCGAATCATTGGAAAATGT+AGG | - | chr2_3:5991075-5991094 | Msa0274200:CDS | 40.0% | |
| AAATAGCCTCATGGGAACTA+TGG | - | chr2_3:5991230-5991249 | Msa0274200:intron | 40.0% | |
| AACTAACCATAGTTCCCATG+AGG | + | chr2_3:5991239-5991258 | None:intergenic | 40.0% | |
| TTAAAAAAGCAATTGGGCGG+TGG | + | chr2_3:5991572-5991591 | None:intergenic | 40.0% | |
| GATAATTAAGAGTCCCACGT+TGG | + | chr2_3:5991716-5991735 | None:intergenic | 40.0% | |
| AATGAAAGGTCAGGCATAGA+AGG | - | chr2_3:5991842-5991861 | Msa0274200:intron | 40.0% | |
| AACCATGGCAAGTGATTTAG+TGG | + | chr2_3:5991936-5991955 | None:intergenic | 40.0% | |
| ACTAAATCACTTGCCATGGT+TGG | - | chr2_3:5991935-5991954 | Msa0274200:intron | 40.0% | |
| !! | GGTTAATTTGTTAGGAGGAG+GGG | + | chr2_3:5992244-5992263 | None:intergenic | 40.0% |
| !! | GTGGTTAATTTGTTAGGAGG+AGG | + | chr2_3:5992246-5992265 | None:intergenic | 40.0% |
| ! | TGTTCTGGATTAGAAGTGGT+TGG | - | chr2_3:5992333-5992352 | Msa0274200:CDS | 40.0% |
| CAGACAAAGTTGTGGTCATT+TGG | + | chr2_3:5992609-5992628 | None:intergenic | 40.0% | |
| ATGATAACACAAAAGGCTCC+TGG | - | chr2_3:5992657-5992676 | Msa0274200:intron | 40.0% | |
| ! | GGACAGAGTCAAGTTCTAAT+CGG | - | chr2_3:5993055-5993074 | Msa0274200:intron | 40.0% |
| GTGCAGACAAAGAAGATGAT+TGG | + | chr2_3:5993182-5993201 | None:intergenic | 40.0% | |
| ATCATCTTCTTTGTCTGCAC+CGG | - | chr2_3:5993182-5993201 | Msa0274200:intron | 40.0% | |
| TCTTTGTACTTCAAAGCAGC+GGG | + | chr2_3:5993273-5993292 | None:intergenic | 40.0% | |
| CTCTTTGTACTTCAAAGCAG+CGG | + | chr2_3:5993274-5993293 | None:intergenic | 40.0% | |
| !! | TTTTCACAGTAATGGGGAAG+AGG | + | chr2_3:5993317-5993336 | None:intergenic | 40.0% |
| CACTCTATTTATGCCCTGTT+TGG | - | chr2_3:5993433-5993452 | Msa0274200:intron | 40.0% | |
| TGACATATGCACTTGGAGAA+TGG | + | chr2_3:5993635-5993654 | None:intergenic | 40.0% | |
| CCTTCAAGAAGAGAAACGAT+GGG | + | chr2_3:5993891-5993910 | None:intergenic | 40.0% | |
| TCCTTCAAGAAGAGAAACGA+TGG | + | chr2_3:5993892-5993911 | None:intergenic | 40.0% | |
| ! | TCTCTTCTTGAAGGAGTACA+TGG | - | chr2_3:5993897-5993916 | Msa0274200:intron | 40.0% |
| ! | AGTACATGGCGTAAAGCTTT+TGG | - | chr2_3:5993911-5993930 | Msa0274200:intron | 40.0% |
| CTCTGGCAATAGTTATGCTA+GGG | - | chr2_3:5994007-5994026 | Msa0274200:intron | 40.0% | |
| TACTGTAGGTCTTCAATAGG+AGG | + | chr2_3:5994391-5994410 | None:intergenic | 40.0% | |
| TCTGGACTGACAAAAAGCTT+AGG | + | chr2_3:5994514-5994533 | None:intergenic | 40.0% | |
| TGTATGTGTCAGTGCTTCAT+AGG | + | chr2_3:5994834-5994853 | None:intergenic | 40.0% | |
| CAACTCTAACACATAGACAC+TGG | - | chr2_3:5994867-5994886 | Msa0274200:intron | 40.0% | |
| ! | CTTGAGATTGAAGGTGTGTT+TGG | + | chr2_3:5994950-5994969 | None:intergenic | 40.0% |
| GTCCGATGCACAGATAAAAT+AGG | - | chr2_3:5994987-5995006 | Msa0274200:intron | 40.0% | |
| CGATGCACAGATAAAATAGG+AGG | - | chr2_3:5994990-5995009 | Msa0274200:intron | 40.0% | |
| ! | AATGTGGTTGGAGGTTTTTC+GGG | + | chr2_3:5995337-5995356 | None:intergenic | 40.0% |
| ! | CAATGTGGTTGGAGGTTTTT+CGG | + | chr2_3:5995338-5995357 | None:intergenic | 40.0% |
| GAAAAACCTCCAACCACATT+GGG | - | chr2_3:5995337-5995356 | Msa0274200:intron | 40.0% | |
| !! | GTTGGTTTGAACCGATCAAA+TGG | - | chr2_3:5995417-5995436 | Msa0274200:intron | 40.0% |
| TGACAATATGAACACCAGAG+AGG | + | chr2_3:5995502-5995521 | None:intergenic | 40.0% | |
| TCTGGTGTTCATATTGTCAC+TGG | - | chr2_3:5995503-5995522 | Msa0274200:intron | 40.0% | |
| CTGGTGTTCATATTGTCACT+GGG | - | chr2_3:5995504-5995523 | Msa0274200:intron | 40.0% | |
| TGGTGTTCATATTGTCACTG+GGG | - | chr2_3:5995505-5995524 | Msa0274200:intron | 40.0% | |
| !!! | CTACTTTTCTCTAAGGTACC+AGG | - | chr2_3:5995578-5995597 | Msa0274200:intron | 40.0% |
| GAAAACCACTGACGAGAAAA+AGG | - | chr2_3:5995691-5995710 | Msa0274200:intron | 40.0% | |
| ! | ATCTTCCTTTTTCTCGTCAG+TGG | + | chr2_3:5995699-5995718 | None:intergenic | 40.0% |
| ! | TTTTCGCGAGTTTTCCAATG+TGG | + | chr2_3:5995730-5995749 | None:intergenic | 40.0% |
| TGGAAAACTCGCGAAAATTG+TGG | - | chr2_3:5995733-5995752 | Msa0274200:CDS | 40.0% | |
| CAATGACCAGGAATATCTTG+CGG | + | chr2_3:5995782-5995801 | None:intergenic | 40.0% | |
| ! | CTGGTCATTGGTTAGTTACA+GGG | - | chr2_3:5995792-5995811 | Msa0274200:CDS | 40.0% |
| ! | TGGTCATTGGTTAGTTACAG+GGG | - | chr2_3:5995793-5995812 | Msa0274200:CDS | 40.0% |
| GCTAAGCTTGGAGTAGAAAA+AGG | - | chr2_3:5995815-5995834 | Msa0274200:CDS | 40.0% | |
| !! | GGCTATTGTTTCTAGTGTGA+AGG | + | chr2_3:5995925-5995944 | None:intergenic | 40.0% |
| !! | TTTACTGTAAAGGGGCACCT+GGG | - | chr2_3:5989674-5989693 | Msa0274200:CDS | 45.0% |
| ! | TAGGCTTGTTCATCTCGATG+AGG | - | chr2_3:5989699-5989718 | Msa0274200:CDS | 45.0% |
| GATTTCTCTCGTGGGAAAAG+TGG | - | chr2_3:5989784-5989803 | Msa0274200:CDS | 45.0% | |
| AGAGTCCCACAATTGGATGA+TGG | - | chr2_3:5990155-5990174 | Msa0274200:CDS | 45.0% | |
| TGAGGGCAATCCTCAATACT+TGG | - | chr2_3:5990198-5990217 | Msa0274200:CDS | 45.0% | |
| TGGCTCAACGGATCTTTGAT+AGG | + | chr2_3:5990287-5990306 | None:intergenic | 45.0% | |
| ! | ATCTATCAGGTGACGGCTAT+CGG | - | chr2_3:5990309-5990328 | Msa0274200:intron | 45.0% |
| ! | CGCTTTAGATGTCTAGTCCT+AGG | - | chr2_3:5990336-5990355 | Msa0274200:intron | 45.0% |
| ! | GATGAGTTATGGCTTGCACA+TGG | - | chr2_3:5990397-5990416 | Msa0274200:intron | 45.0% |
| GGTCCCTAGTTTCCTGAAAT+TGG | - | chr2_3:5990583-5990602 | Msa0274200:intron | 45.0% | |
| GCATGCAACAAACTCTGTCA+TGG | - | chr2_3:5990699-5990718 | Msa0274200:intron | 45.0% | |
| CACTTTGTTGGAAATCGCAG+AGG | + | chr2_3:5990869-5990888 | None:intergenic | 45.0% | |
| TGTCAAAGTTACTTCCGAGG+AGG | - | chr2_3:5991145-5991164 | Msa0274200:intron | 45.0% | |
| ACAAATTTACCGTTGCGCCA+AGG | + | chr2_3:5991173-5991192 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr2_3:5991194-5991213 | Msa0274200:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr2_3:5991195-5991214 | Msa0274200:intron | 45.0% | |
| ATGTCCTGGAAATAGCCTCA+TGG | - | chr2_3:5991221-5991240 | Msa0274200:intron | 45.0% | |
| TGTCCTGGAAATAGCCTCAT+GGG | - | chr2_3:5991222-5991241 | Msa0274200:intron | 45.0% | |
| TGAACAAGTGTGTATAGCGG+GGG | + | chr2_3:5991680-5991699 | None:intergenic | 45.0% | |
| CTGAACAAGTGTGTATAGCG+GGG | + | chr2_3:5991681-5991700 | None:intergenic | 45.0% | |
| CCTGAACAAGTGTGTATAGC+GGG | + | chr2_3:5991682-5991701 | None:intergenic | 45.0% | |
| GCCTGAACAAGTGTGTATAG+CGG | + | chr2_3:5991683-5991702 | None:intergenic | 45.0% | |
| !! | CAACTTCACTGGCTCTTCAA+TGG | - | chr2_3:5991898-5991917 | Msa0274200:intron | 45.0% |
| AGCCACTAAATCACTTGCCA+TGG | - | chr2_3:5991931-5991950 | Msa0274200:intron | 45.0% | |
| ! | TGGCCTTGAATGATGAAGTC+AGG | - | chr2_3:5992002-5992021 | Msa0274200:intron | 45.0% |
| TAACACAAAAGGCTCCTGGT+TGG | - | chr2_3:5992661-5992680 | Msa0274200:intron | 45.0% | |
| !!! | TTTTTTTGAGGGGAGAGGAG+AGG | - | chr2_3:5992986-5993005 | Msa0274200:intron | 45.0% |
| !!! | TTTTTTGAGGGGAGAGGAGA+GGG | - | chr2_3:5992987-5993006 | Msa0274200:intron | 45.0% |
| GTTACATCTGCAACAGTTGG+TGG | - | chr2_3:5993129-5993148 | Msa0274200:intron | 45.0% | |
| GCAGAGACGTCGTGTATATT+AGG | - | chr2_3:5993151-5993170 | Msa0274200:intron | 45.0% | |
| CTTGGAGAATGGAGACTGTT+TGG | + | chr2_3:5993624-5993643 | None:intergenic | 45.0% | |
| ATTAGTAGCGTGACAGTCTG+AGG | + | chr2_3:5993722-5993741 | None:intergenic | 45.0% | |
| CCCATCGTTTCTCTTCTTGA+AGG | - | chr2_3:5993888-5993907 | Msa0274200:intron | 45.0% | |
| CCTAGCATAACTATTGCCAG+AGG | + | chr2_3:5994009-5994028 | None:intergenic | 45.0% | |
| CCTCTGGCAATAGTTATGCT+AGG | - | chr2_3:5994006-5994025 | Msa0274200:intron | 45.0% | |
| TAATGAGCTCATTCAGCCCT+AGG | - | chr2_3:5994030-5994049 | Msa0274200:intron | 45.0% | |
| ! | GCTTTTTGTCAGTCCAGATC+AGG | - | chr2_3:5994516-5994535 | Msa0274200:intron | 45.0% |
| GTGTTACAATGAACCGTCTG+AGG | + | chr2_3:5994695-5994714 | None:intergenic | 45.0% | |
| CTCTAGACTACAAGTGAGTG+AGG | - | chr2_3:5995189-5995208 | Msa0274200:intron | 45.0% | |
| TTACCTGCGATGACAAGTCA+TGG | + | chr2_3:5995220-5995239 | None:intergenic | 45.0% | |
| TTGTCATCGCAGGTAACAGT+TGG | - | chr2_3:5995224-5995243 | Msa0274200:intron | 45.0% | |
| ! | GGTTCTGTTTGTTGCCTTCT+AGG | + | chr2_3:5995280-5995299 | None:intergenic | 45.0% |
| GCTGCAAATGAATTGCGAGT+CGG | + | chr2_3:5995301-5995320 | None:intergenic | 45.0% | |
| CGAAAAACCTCCAACCACAT+TGG | - | chr2_3:5995336-5995355 | Msa0274200:intron | 45.0% | |
| AATCGGTGCAGTGCTTACAT+GGG | + | chr2_3:5995453-5995472 | None:intergenic | 45.0% | |
| GAAGATAGTTCCGTCCACAT+TGG | - | chr2_3:5995713-5995732 | Msa0274200:CDS | 45.0% | |
| CGCAAGATATTCCTGGTCAT+TGG | - | chr2_3:5995780-5995799 | Msa0274200:CDS | 45.0% | |
| CCTGTAACTAACCAATGACC+AGG | + | chr2_3:5995794-5995813 | None:intergenic | 45.0% | |
| ! | CCTGGTCATTGGTTAGTTAC+AGG | - | chr2_3:5995791-5995810 | Msa0274200:CDS | 45.0% |
| TTAGTTACAGGGGCTAAGCT+TGG | - | chr2_3:5995803-5995822 | Msa0274200:CDS | 45.0% | |
| TAGCCAAGCATTCTTTGCAC+AGG | - | chr2_3:5995940-5995959 | Msa0274200:CDS | 45.0% | |
| AGCCAAGCATTCTTTGCACA+GGG | - | chr2_3:5995941-5995960 | Msa0274200:CDS | 45.0% | |
| TTCCCTGTGCAAAGAATGCT+TGG | + | chr2_3:5995946-5995965 | None:intergenic | 45.0% | |
| !!! | TTAATTAAGTTTTTTTATAT+TGG | + | chr2_3:5990481-5990500 | None:intergenic | 5.0% |
| !! | TCAATCCAAGCTTTGGGTCG+TGG | - | chr2_3:5989622-5989641 | Msa0274200:three_prime_UTR | 50.0% |
| CAAAACCACGACCCAAAGCT+TGG | + | chr2_3:5989630-5989649 | None:intergenic | 50.0% | |
| !! | CTTTACTGTAAAGGGGCACC+TGG | - | chr2_3:5989673-5989692 | Msa0274200:CDS | 50.0% |
| AGATGAACAAGCCTAGACCC+AGG | + | chr2_3:5989694-5989713 | None:intergenic | 50.0% | |
| ! | CCTGATAGATGGTGGCTCAA+CGG | + | chr2_3:5990299-5990318 | None:intergenic | 50.0% |
| AGCCACCATCTATCAGGTGA+CGG | - | chr2_3:5990302-5990321 | Msa0274200:intron | 50.0% | |
| GATAGCCGTCACCTGATAGA+TGG | + | chr2_3:5990310-5990329 | None:intergenic | 50.0% | |
| ! | TCTATCAGGTGACGGCTATC+GGG | - | chr2_3:5990310-5990329 | Msa0274200:intron | 50.0% |
| TCAGGAAACTAGGGACCCAA+AGG | + | chr2_3:5990580-5990599 | None:intergenic | 50.0% | |
| AGAGTGGTGTGGCGAATCAT+TGG | - | chr2_3:5991065-5991084 | Msa0274200:CDS | 50.0% | |
| ! | GTTCCCATGAGGCTATTTCC+AGG | + | chr2_3:5991228-5991247 | None:intergenic | 50.0% |
| CTAACACAACCCCGCTAAAC+CGG | - | chr2_3:5991471-5991490 | Msa0274200:intron | 50.0% | |
| !! | TAAACCGGCTTGTGAGGTGA+TGG | - | chr2_3:5991486-5991505 | Msa0274200:intron | 50.0% |
| TACGGGAGAGAATCCCAATC+CGG | + | chr2_3:5991516-5991535 | None:intergenic | 50.0% | |
| CTGTCCAGTGAAAAGGCTAC+GGG | + | chr2_3:5991533-5991552 | None:intergenic | 50.0% | |
| CCTGTCCAGTGAAAAGGCTA+CGG | + | chr2_3:5991534-5991553 | None:intergenic | 50.0% | |
| ! | CGTAGCCTTTTCACTGGACA+GGG | - | chr2_3:5991532-5991551 | Msa0274200:intron | 50.0% |
| GCACTGTAGAGTCAAACGAG+TGG | - | chr2_3:5991604-5991623 | Msa0274200:CDS | 50.0% | |
| CCCGCTATACACACTTGTTC+AGG | - | chr2_3:5991679-5991698 | Msa0274200:CDS | 50.0% | |
| GCGCCTGACTTCATCATTCA+AGG | + | chr2_3:5992008-5992027 | None:intergenic | 50.0% | |
| GATGCTGGATCCCAAGAGTA+AGG | + | chr2_3:5992037-5992056 | None:intergenic | 50.0% | |
| TGTGTTTGTCTCAGCCAACC+AGG | + | chr2_3:5992678-5992697 | None:intergenic | 50.0% | |
| !! | TTTTTGAGGGGAGAGGAGAG+GGG | - | chr2_3:5992988-5993007 | Msa0274200:intron | 50.0% |
| GCGCCCAAACTCGAGTTATT+TGG | + | chr2_3:5994426-5994445 | None:intergenic | 50.0% | |
| AATAACTCGAGTTTGGGCGC+CGG | - | chr2_3:5994426-5994445 | Msa0274200:intron | 50.0% | |
| ! | ACACCATGACTTGTCATCGC+AGG | - | chr2_3:5995214-5995233 | Msa0274200:intron | 50.0% |
| TTCTAGGCTCAGCCTTAGTC+CGG | + | chr2_3:5995264-5995283 | None:intergenic | 50.0% | |
| TGTGTGCATCCCAATGTGGT+TGG | + | chr2_3:5995349-5995368 | None:intergenic | 50.0% | |
| ACCACATTGGGATGCACACA+TGG | - | chr2_3:5995349-5995368 | Msa0274200:intron | 50.0% | |
| !! | TTGCCATTTGGGAGCACCTA+TGG | + | chr2_3:5995375-5995394 | None:intergenic | 50.0% |
| ATAGGTGCTCCCAAATGGCA+AGG | - | chr2_3:5995374-5995393 | Msa0274200:intron | 50.0% | |
| CAATCGGTGCAGTGCTTACA+TGG | + | chr2_3:5995454-5995473 | None:intergenic | 50.0% | |
| TACCAGGGTGCACGATAAGA+CGG | - | chr2_3:5995594-5995613 | Msa0274200:intron | 50.0% | |
| CACGATAAGACGGTCAGTGT+GGG | - | chr2_3:5995604-5995623 | Msa0274200:intron | 50.0% | |
| GGATCATAACCCTTCCACTC+CGG | - | chr2_3:5995625-5995644 | Msa0274200:intron | 50.0% | |
| ! | TCTGATTTGTGTGCAGCTGC+CGG | + | chr2_3:5995647-5995666 | None:intergenic | 50.0% |
| GCAGCTGCACACAAATCAGA+CGG | - | chr2_3:5995647-5995666 | Msa0274200:intron | 50.0% | |
| AGACGGTGCTTCGTCATCAT+CGG | - | chr2_3:5995664-5995683 | Msa0274200:intron | 50.0% | |
| ! | CGCGAGTTTTCCAATGTGGA+CGG | + | chr2_3:5995726-5995745 | None:intergenic | 50.0% |
| AAAGGGCCGCAAGATATTCC+TGG | - | chr2_3:5995773-5995792 | Msa0274200:CDS | 50.0% | |
| CCGTTGAGCCACCATCTATC+AGG | - | chr2_3:5990296-5990315 | Msa0274200:intron | 55.0% | |
| AGCCGTCACCTGATAGATGG+TGG | + | chr2_3:5990307-5990326 | None:intergenic | 55.0% | |
| GATGTCTAGTCCTAGGCGTG+AGG | - | chr2_3:5990343-5990362 | Msa0274200:intron | 55.0% | |
| CACACACATACCTCACGCCT+AGG | + | chr2_3:5990356-5990375 | None:intergenic | 55.0% | |
| TTACTTCCGAGGAGGAGCCT+TGG | - | chr2_3:5991153-5991172 | Msa0274200:intron | 55.0% | |
| AAGGTCACGGGTTCATGTCC+TGG | - | chr2_3:5991207-5991226 | Msa0274200:intron | 55.0% | |
| CGGTTTAGCGGGGTTGTGTT+AGG | + | chr2_3:5991473-5991492 | None:intergenic | 55.0% | |
| ! | ACCTCACAAGCCGGTTTAGC+GGG | + | chr2_3:5991484-5991503 | None:intergenic | 55.0% |
| ! | CACCTCACAAGCCGGTTTAG+CGG | + | chr2_3:5991485-5991504 | None:intergenic | 55.0% |
| GCAACCATCACCTCACAAGC+CGG | + | chr2_3:5991493-5991512 | None:intergenic | 55.0% | |
| ! | CTTGTGAGGTGATGGTTGCC+CGG | - | chr2_3:5991494-5991513 | Msa0274200:intron | 55.0% |
| ! | AGGTGATGGTTGCCCGGATT+GGG | - | chr2_3:5991500-5991519 | Msa0274200:intron | 55.0% |
| ACGGGAGAGAATCCCAATCC+GGG | + | chr2_3:5991515-5991534 | None:intergenic | 55.0% | |
| ! | CTCTCCCGTAGCCTTTTCAC+TGG | - | chr2_3:5991526-5991545 | Msa0274200:intron | 55.0% |
| ! | CCGTAGCCTTTTCACTGGAC+AGG | - | chr2_3:5991531-5991550 | Msa0274200:intron | 55.0% |
| CTGCACCCTGTCCAGTGAAA+AGG | + | chr2_3:5991540-5991559 | None:intergenic | 55.0% | |
| TTTCACTGGACAGGGTGCAG+TGG | - | chr2_3:5991540-5991559 | Msa0274200:intron | 55.0% | |
| TGCAGTGACTGGAGTCCAGT+GGG | + | chr2_3:5991637-5991656 | None:intergenic | 55.0% | |
| ACTGGACTCCAGTCACTGCA+GGG | - | chr2_3:5991637-5991656 | Msa0274200:CDS | 55.0% | |
| AACAGATCCCCTGCAGTGAC+TGG | + | chr2_3:5991648-5991667 | None:intergenic | 55.0% | |
| AGGCCAGATCACTTCCAACG+TGG | - | chr2_3:5991699-5991718 | Msa0274200:CDS | 55.0% | |
| GGCCAGATCACTTCCAACGT+GGG | - | chr2_3:5991700-5991719 | Msa0274200:CDS | 55.0% | |
| GTCCCACGTTGGAAGTGATC+TGG | + | chr2_3:5991705-5991724 | None:intergenic | 55.0% | |
| GCGCGCTGTTCCTTACTCTT+GGG | - | chr2_3:5992024-5992043 | Msa0274200:intron | 55.0% | |
| CTCTTGGGATCCAGCATCCT+TGG | - | chr2_3:5992039-5992058 | Msa0274200:intron | 55.0% | |
| GCTTACCTAGCCAAGGATGC+TGG | + | chr2_3:5992052-5992071 | None:intergenic | 55.0% | |
| GGACTAAGGCTGAGCCTAGA+AGG | - | chr2_3:5995263-5995282 | Msa0274200:intron | 55.0% | |
| GTGCATCCCAATGTGGTTGG+AGG | + | chr2_3:5995346-5995365 | None:intergenic | 55.0% | |
| GCCATGTGTGCATCCCAATG+TGG | + | chr2_3:5995353-5995372 | None:intergenic | 55.0% | |
| TGGGATGCACACATGGCCAT+AGG | - | chr2_3:5995356-5995375 | Msa0274200:intron | 55.0% | |
| TGGCCATAGGTGCTCCCAAA+TGG | - | chr2_3:5995369-5995388 | Msa0274200:intron | 55.0% | |
| TGCTCCCAAATGGCAAGGTC+CGG | - | chr2_3:5995379-5995398 | Msa0274200:intron | 55.0% | |
| ! | TCCTCCGGACCTTGCCATTT+GGG | + | chr2_3:5995386-5995405 | None:intergenic | 55.0% |
| ACCAACATTGGGGACCTCTC+TGG | - | chr2_3:5995485-5995504 | Msa0274200:intron | 55.0% | |
| ACCAGAGAGGTCCCCAATGT+TGG | + | chr2_3:5995489-5995508 | None:intergenic | 55.0% | |
| ATTGTCACTGGGGCCCAACT+CGG | - | chr2_3:5995515-5995534 | Msa0274200:intron | 55.0% | |
| GAAGTCCCAAACGCCGAGTT+GGG | + | chr2_3:5995531-5995550 | None:intergenic | 55.0% | |
| ! | CAACTCGGCGTTTGGGACTT+CGG | - | chr2_3:5995530-5995549 | Msa0274200:intron | 55.0% |
| GCACGATAAGACGGTCAGTG+TGG | - | chr2_3:5995603-5995622 | Msa0274200:intron | 55.0% | |
| !! | GTAAAGGGGCACCTGGGTCT+AGG | - | chr2_3:5989680-5989699 | Msa0274200:CDS | 60.0% |
| ! | CCTCACAAGCCGGTTTAGCG+GGG | + | chr2_3:5991483-5991502 | None:intergenic | 60.0% |
| ! | GAGGTGATGGTTGCCCGGAT+TGG | - | chr2_3:5991499-5991518 | Msa0274200:intron | 60.0% |
| ACGAGTGGCTGAGATCCCAC+TGG | - | chr2_3:5991619-5991638 | Msa0274200:CDS | 60.0% | |
| CTGCAGTGACTGGAGTCCAG+TGG | + | chr2_3:5991638-5991657 | None:intergenic | 60.0% | |
| CACTGGACTCCAGTCACTGC+AGG | - | chr2_3:5991636-5991655 | Msa0274200:CDS | 60.0% | |
| CTGGACTCCAGTCACTGCAG+GGG | - | chr2_3:5991638-5991657 | Msa0274200:CDS | 60.0% | |
| ACTGCAGGGGATCTGTTCCC+TGG | - | chr2_3:5991651-5991670 | Msa0274200:CDS | 60.0% | |
| ! | GTGTATAGCGGGGGCAACCA+GGG | + | chr2_3:5991671-5991690 | None:intergenic | 60.0% |
| ! | TGTGTATAGCGGGGGCAACC+AGG | + | chr2_3:5991672-5991691 | None:intergenic | 60.0% |
| GGCGCGCTGTTCCTTACTCT+TGG | - | chr2_3:5992023-5992042 | Msa0274200:intron | 60.0% | |
| GGGATCCAGCATCCTTGGCT+AGG | - | chr2_3:5992044-5992063 | Msa0274200:intron | 60.0% | |
| GTTGGACGCAAGCCTGTGAC+CGG | - | chr2_3:5995242-5995261 | Msa0274200:intron | 60.0% | |
| GCAAGCCTGTGACCGGACTA+AGG | - | chr2_3:5995249-5995268 | Msa0274200:intron | 60.0% | |
| CTCAGCCTTAGTCCGGTCAC+AGG | + | chr2_3:5995257-5995276 | None:intergenic | 60.0% | |
| TCCCAAATGGCAAGGTCCGG+AGG | - | chr2_3:5995382-5995401 | Msa0274200:intron | 60.0% | |
| CTCCTCCGGACCTTGCCATT+TGG | + | chr2_3:5995387-5995406 | None:intergenic | 60.0% | |
| CAACGGCTGTCTTGCTCCTC+CGG | + | chr2_3:5995401-5995420 | None:intergenic | 60.0% | |
| CGAAGTCCCAAACGCCGAGT+TGG | + | chr2_3:5995532-5995551 | None:intergenic | 60.0% | |
| GACCGTCTTATCGTGCACCC+TGG | + | chr2_3:5995599-5995618 | None:intergenic | 60.0% | |
| TTTGTGTGCAGCTGCCGGAG+TGG | + | chr2_3:5995642-5995661 | None:intergenic | 60.0% | |
| GTTGCGCCAAGGCTCCTCCT+CGG | + | chr2_3:5991162-5991181 | None:intergenic | 65.0% | |
| GAGGAGGAGCCTTGGCGCAA+CGG | - | chr2_3:5991161-5991180 | Msa0274200:intron | 65.0% | |
| !! | CCCCGCTAAACCGGCTTGTG+AGG | - | chr2_3:5991480-5991499 | Msa0274200:intron | 65.0% |
| CGGAGGAGCAAGACAGCCGT+TGG | - | chr2_3:5995399-5995418 | Msa0274200:intron | 65.0% | |
| TGGGGCCCAACTCGGCGTTT+GGG | - | chr2_3:5995523-5995542 | Msa0274200:intron | 65.0% | |
| GTGCAGCTGCCGGAGTGGAA+GGG | + | chr2_3:5995637-5995656 | None:intergenic | 65.0% | |
| TGTGCAGCTGCCGGAGTGGA+AGG | + | chr2_3:5995638-5995657 | None:intergenic | 65.0% | |
| CTGGGGCCCAACTCGGCGTT+TGG | - | chr2_3:5995522-5995541 | Msa0274200:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 5989432 | 5996111 | 5989432 | ID=Msa0274200;Name=Msa0274200 |
| chr2_3 | mRNA | 5989432 | 5996111 | 5989432 | ID=Msa0274200-mRNA-1;Parent=Msa0274200;Name=Msa0274200-mRNA-1;_AED=0.10;_eAED=0.10;_QI=127|1|1|1|1|1|6|231|566 |
| chr2_3 | exon | 5989432 | 5990307 | 5989432 | ID=Msa0274200-mRNA-1:exon:2769;Parent=Msa0274200-mRNA-1 |
| chr2_3 | exon | 5991006 | 5991160 | 5991006 | ID=Msa0274200-mRNA-1:exon:2768;Parent=Msa0274200-mRNA-1 |
| chr2_3 | exon | 5991583 | 5991766 | 5991583 | ID=Msa0274200-mRNA-1:exon:2767;Parent=Msa0274200-mRNA-1 |
| chr2_3 | exon | 5992247 | 5992442 | 5992247 | ID=Msa0274200-mRNA-1:exon:2766;Parent=Msa0274200-mRNA-1 |
| chr2_3 | exon | 5993478 | 5993716 | 5993478 | ID=Msa0274200-mRNA-1:exon:2765;Parent=Msa0274200-mRNA-1 |
| chr2_3 | exon | 5995703 | 5996111 | 5995703 | ID=Msa0274200-mRNA-1:exon:2764;Parent=Msa0274200-mRNA-1 |
| chr2_3 | five_prime_UTR | 5995985 | 5996111 | 5995985 | ID=Msa0274200-mRNA-1:five_prime_utr;Parent=Msa0274200-mRNA-1 |
| chr2_3 | CDS | 5995703 | 5995984 | 5995703 | ID=Msa0274200-mRNA-1:cds;Parent=Msa0274200-mRNA-1 |
| chr2_3 | CDS | 5993478 | 5993716 | 5993478 | ID=Msa0274200-mRNA-1:cds;Parent=Msa0274200-mRNA-1 |
| chr2_3 | CDS | 5992247 | 5992442 | 5992247 | ID=Msa0274200-mRNA-1:cds;Parent=Msa0274200-mRNA-1 |
| chr2_3 | CDS | 5991583 | 5991766 | 5991583 | ID=Msa0274200-mRNA-1:cds;Parent=Msa0274200-mRNA-1 |
| chr2_3 | CDS | 5991006 | 5991160 | 5991006 | ID=Msa0274200-mRNA-1:cds;Parent=Msa0274200-mRNA-1 |
| chr2_3 | CDS | 5989663 | 5990307 | 5989663 | ID=Msa0274200-mRNA-1:cds;Parent=Msa0274200-mRNA-1 |
| chr2_3 | three_prime_UTR | 5989432 | 5989662 | 5989432 | ID=Msa0274200-mRNA-1:three_prime_utr;Parent=Msa0274200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
