Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0323250 | XP_003592974.2 | 92.740 | 551 | 5 | 2 | 1 | 516 | 1 | 551 | 0.0 | 1042 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0323250 | sp|O23693|MLO4_ARATH | 63.519 | 540 | 149 | 8 | 1 | 501 | 1 | 531 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0231170 | Msa0323250 | 0.961492 | 9.152072e-120 | -8.615850e-47 |
| Msa0323250 | Msa0323340 | 0.804815 | 1.802632e-49 | -8.615850e-47 |
| Msa0323250 | Msa0881340 | 0.989151 | 6.625574e-177 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0323250 | MtrunA17_Chr2g0277471 | 92.740 | 551 | 5 | 2 | 1 | 516 | 1 | 551 | 0.0 | 1042 |
| Msa0323250 | MtrunA17_Chr2g0317801 | 44.397 | 464 | 214 | 4 | 1 | 428 | 1 | 456 | 2.53e-128 | 385 |
| Msa0323250 | MtrunA17_Chr5g0405641 | 47.804 | 387 | 164 | 9 | 1 | 350 | 2 | 387 | 3.35e-102 | 312 |
| Msa0323250 | MtrunA17_Chr2g0326301 | 35.368 | 475 | 258 | 10 | 8 | 436 | 7 | 478 | 2.32e-83 | 270 |
| Msa0323250 | MtrunA17_Chr3g0144171 | 33.835 | 532 | 288 | 15 | 1 | 487 | 1 | 513 | 1.48e-82 | 266 |
| Msa0323250 | MtrunA17_Chr6g0462051 | 34.656 | 479 | 254 | 13 | 9 | 437 | 9 | 478 | 1.59e-81 | 264 |
| Msa0323250 | MtrunA17_Chr3g0145831 | 34.879 | 453 | 239 | 8 | 10 | 414 | 13 | 457 | 1.86e-76 | 249 |
| Msa0323250 | MtrunA17_Chr5g0407381 | 31.676 | 543 | 298 | 16 | 9 | 507 | 28 | 541 | 2.26e-75 | 248 |
| Msa0323250 | MtrunA17_Chr8g0370181 | 32.135 | 473 | 268 | 8 | 9 | 438 | 38 | 500 | 5.49e-73 | 242 |
| Msa0323250 | MtrunA17_Chr8g0337941 | 31.656 | 477 | 267 | 7 | 9 | 431 | 12 | 483 | 7.68e-73 | 240 |
| Msa0323250 | MtrunA17_Chr2g0291441 | 34.423 | 459 | 246 | 10 | 6 | 425 | 5 | 447 | 4.37e-71 | 234 |
| Msa0323250 | MtrunA17_Chr8g0337931 | 31.924 | 473 | 254 | 10 | 15 | 430 | 8 | 469 | 2.87e-67 | 225 |
| Msa0323250 | MtrunA17_Chr4g0040611 | 28.210 | 514 | 314 | 10 | 4 | 481 | 2 | 496 | 7.47e-61 | 209 |
| Msa0323250 | MtrunA17_Chr3g0144201 | 32.492 | 317 | 183 | 6 | 9 | 299 | 11 | 322 | 1.37e-47 | 173 |
| Msa0323250 | MtrunA17_Chr3g0144201 | 33.714 | 175 | 106 | 4 | 313 | 485 | 398 | 564 | 7.22e-18 | 86.7 |
| Msa0323250 | MtrunA17_Chr5g0405651 | 50.000 | 80 | 37 | 1 | 360 | 436 | 1 | 80 | 3.53e-16 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0323250 | AT1G11000.1 | 63.519 | 540 | 149 | 8 | 1 | 501 | 1 | 531 | 0.0 | 660 |
| Msa0323250 | AT1G11000.3 | 63.519 | 540 | 149 | 8 | 1 | 501 | 1 | 531 | 0.0 | 660 |
| Msa0323250 | AT1G11000.2 | 65.842 | 404 | 105 | 3 | 1 | 373 | 1 | 402 | 0.0 | 521 |
| Msa0323250 | AT5G53760.2 | 43.633 | 479 | 219 | 6 | 9 | 442 | 16 | 488 | 1.23e-134 | 402 |
| Msa0323250 | AT5G53760.1 | 43.633 | 479 | 219 | 6 | 9 | 442 | 16 | 488 | 1.23e-134 | 402 |
| Msa0323250 | AT1G26700.1 | 43.326 | 487 | 227 | 6 | 9 | 450 | 10 | 492 | 8.98e-134 | 399 |
| Msa0323250 | AT1G26700.2 | 43.326 | 487 | 227 | 6 | 9 | 450 | 10 | 492 | 8.98e-134 | 399 |
| Msa0323250 | AT2G33670.1 | 31.969 | 513 | 290 | 9 | 9 | 488 | 15 | 501 | 1.01e-84 | 271 |
| Msa0323250 | AT4G02600.2 | 37.313 | 469 | 240 | 12 | 1 | 421 | 1 | 463 | 4.58e-83 | 267 |
| Msa0323250 | AT4G02600.1 | 37.313 | 469 | 240 | 12 | 1 | 421 | 1 | 463 | 4.58e-83 | 267 |
| Msa0323250 | AT1G61560.1 | 33.122 | 474 | 268 | 10 | 9 | 436 | 8 | 478 | 9.57e-82 | 265 |
| Msa0323250 | AT4G24250.1 | 32.773 | 476 | 273 | 6 | 4 | 440 | 2 | 469 | 1.18e-81 | 262 |
| Msa0323250 | AT2G44110.2 | 33.042 | 457 | 263 | 5 | 8 | 427 | 5 | 455 | 1.68e-80 | 260 |
| Msa0323250 | AT2G44110.1 | 33.260 | 457 | 261 | 6 | 8 | 427 | 5 | 454 | 6.37e-80 | 258 |
| Msa0323250 | AT2G39200.1 | 33.693 | 463 | 260 | 10 | 9 | 428 | 6 | 464 | 3.86e-79 | 258 |
| Msa0323250 | AT1G61560.4 | 32.563 | 476 | 268 | 12 | 9 | 436 | 8 | 478 | 6.23e-77 | 253 |
| Msa0323250 | AT1G42560.1 | 33.333 | 459 | 249 | 9 | 9 | 423 | 14 | 459 | 1.06e-76 | 249 |
| Msa0323250 | AT1G11310.1 | 32.285 | 477 | 271 | 9 | 9 | 436 | 8 | 481 | 2.78e-76 | 251 |
| Msa0323250 | AT1G61560.10 | 32.949 | 434 | 242 | 10 | 9 | 396 | 8 | 438 | 2.85e-73 | 239 |
| Msa0323250 | AT2G17430.1 | 32.450 | 453 | 258 | 8 | 4 | 421 | 26 | 465 | 1.26e-72 | 240 |
| Msa0323250 | AT5G65970.1 | 33.258 | 442 | 240 | 8 | 9 | 414 | 34 | 456 | 2.33e-69 | 233 |
| Msa0323250 | AT2G17480.1 | 32.353 | 442 | 257 | 7 | 9 | 414 | 39 | 474 | 2.66e-65 | 222 |
| Msa0323250 | AT4G24250.2 | 32.274 | 409 | 231 | 5 | 4 | 373 | 2 | 403 | 3.11e-65 | 217 |
| Msa0323250 | AT3G45290.1 | 31.453 | 461 | 269 | 11 | 3 | 427 | 9 | 458 | 1.79e-64 | 218 |
| Msa0323250 | AT1G61560.7 | 31.873 | 411 | 231 | 10 | 9 | 373 | 8 | 415 | 3.85e-64 | 214 |
| Msa0323250 | AT1G61560.9 | 31.873 | 411 | 231 | 10 | 9 | 373 | 8 | 415 | 3.85e-64 | 214 |
| Msa0323250 | AT1G61560.2 | 31.981 | 419 | 236 | 10 | 64 | 436 | 1 | 416 | 6.26e-64 | 217 |
| Msa0323250 | AT1G61560.3 | 31.981 | 419 | 236 | 10 | 64 | 436 | 1 | 416 | 6.26e-64 | 217 |
| Msa0323250 | AT1G11310.2 | 31.884 | 414 | 230 | 9 | 9 | 373 | 8 | 418 | 1.58e-61 | 207 |
| Msa0323250 | AT1G61560.6 | 31.783 | 387 | 215 | 10 | 9 | 349 | 8 | 391 | 3.35e-59 | 201 |
| Msa0323250 | AT1G61560.8 | 31.783 | 387 | 215 | 10 | 9 | 349 | 8 | 391 | 3.35e-59 | 201 |
| Msa0323250 | AT1G61560.5 | 31.783 | 387 | 215 | 10 | 9 | 349 | 8 | 391 | 3.35e-59 | 201 |
| Msa0323250 | AT1G11310.3 | 30.332 | 422 | 242 | 9 | 64 | 436 | 1 | 419 | 3.52e-57 | 199 |
| Msa0323250 | AT1G42560.2 | 31.016 | 374 | 201 | 9 | 9 | 338 | 14 | 374 | 3.88e-49 | 174 |
| Msa0323250 | AT5G65970.2 | 34.899 | 298 | 176 | 6 | 4 | 300 | 31 | 311 | 8.77e-48 | 172 |
Find 104 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGTCTTTGTCTGCTTCT+TGG | 0.198947 | 2_4:+26925949 | Msa0323250:CDS |
| CATACAGTTTGTGATATTTC+AGG | 0.214387 | 2_4:+26929435 | Msa0323250:CDS |
| TCTCATCGATCGTTGATTCT+AGG | 0.269205 | 2_4:-26930243 | None:intergenic |
| AACTTTGCAGCTGGCCGCTT+TGG | 0.282048 | 2_4:+26928993 | Msa0323250:intron |
| TACTCTATAGAATTCCTTCT+TGG | 0.285750 | 2_4:-26930533 | None:intergenic |
| TTCATGGCATTCTAGGAATA+AGG | 0.290919 | 2_4:+26928877 | Msa0323250:CDS |
| ATCATCATTCGGTTGACATC+TGG | 0.296844 | 2_4:+26929748 | Msa0323250:CDS |
| CCTGTGAAACTATTACATTC+AGG | 0.321958 | 2_4:-26929942 | None:intergenic |
| GCAGTGTTCTTGTTCAGTTC+TGG | 0.326834 | 2_4:+26929899 | Msa0323250:intron |
| GAGCGTTCTATCTACCGTTT+TGG | 0.346359 | 2_4:+26925974 | Msa0323250:CDS |
| GACGAATTTCATGGCATTCT+AGG | 0.354070 | 2_4:+26928870 | Msa0323250:CDS |
| ATTCAAAGACTCTAAGTCTA+AGG | 0.354684 | 2_4:-26930311 | None:intergenic |
| TTGAAATGGCCTCATTCATA+TGG | 0.364022 | 2_4:+26929559 | Msa0323250:CDS |
| GCAGGAATCCTATACTAATA+TGG | 0.364635 | 2_4:+26928378 | Msa0323250:CDS |
| ATGATCCATAACAATATATC+TGG | 0.379893 | 2_4:-26929415 | None:intergenic |
| TTGATAGAGTTGATGCTGCT+TGG | 0.384287 | 2_4:+26927054 | Msa0323250:intron |
| ATGTTACCTCTCCACATTGA+TGG | 0.395745 | 2_4:-26927269 | None:intergenic |
| TGATAGAGTTGATGCTGCTT+GGG | 0.407596 | 2_4:+26927055 | Msa0323250:intron |
| GAACCATTTGTTTCATATGA+AGG | 0.417481 | 2_4:+26927373 | Msa0323250:CDS |
| ATTACCATCCATATTAGTAT+AGG | 0.427214 | 2_4:-26928386 | None:intergenic |
| GCTTGAAATCTGGCAGCAGC+AGG | 0.448228 | 2_4:+26929336 | Msa0323250:CDS |
| AATCATGACATGCTCAATCA+TGG | 0.454257 | 2_4:-26927184 | None:intergenic |
| TTTACTTGTGTTCTTGCACT+TGG | 0.457809 | 2_4:-26929361 | None:intergenic |
| TCTCTTACACCAACTGTGTA+AGG | 0.457899 | 2_4:-26930173 | None:intergenic |
| GATGTAAGAAGAAATTATAA+TGG | 0.460054 | 2_4:+26925856 | Msa0323250:exon |
| TCATCATTCGGTTGACATCT+GGG | 0.460436 | 2_4:+26929749 | Msa0323250:CDS |
| CTCATCGATCGTTGATTCTA+GGG | 0.460757 | 2_4:-26930242 | None:intergenic |
| TTGGTGCAGATGGGAAAATC+AGG | 0.462485 | 2_4:+26928012 | Msa0323250:CDS |
| GCACCACTATACAGTCCCTT+TGG | 0.464450 | 2_4:-26927243 | None:intergenic |
| AGATCTATAGTTGGTGCAGA+TGG | 0.465675 | 2_4:+26928002 | Msa0323250:intron |
| CTGTATAGTTGTCTCGCTGT+TGG | 0.467163 | 2_4:+26927445 | Msa0323250:CDS |
| CTGTGAAACTATTACATTCA+GGG | 0.479207 | 2_4:-26929941 | None:intergenic |
| ACGCGTCTCATCCGTGGAGC+AGG | 0.483102 | 2_4:+26928360 | Msa0323250:CDS |
| AGACCTTCATATGAAACAAA+TGG | 0.484020 | 2_4:-26927376 | None:intergenic |
| ACCATTACATGATCATCATT+CGG | 0.484425 | 2_4:+26929737 | Msa0323250:CDS |
| CATGCAGAATGCCTTTGAAA+TGG | 0.490679 | 2_4:+26929545 | Msa0323250:intron |
| GATTACCTCGCACTCCGTCT+TGG | 0.495055 | 2_4:+26928663 | Msa0323250:CDS |
| CGAATTGATATGTACGGGTT+CGG | 0.496092 | 2_4:-26930401 | None:intergenic |
| TGTGTTTGTAGATCTATAGT+TGG | 0.500413 | 2_4:+26927993 | Msa0323250:intron |
| CCTGAATGTAATAGTTTCAC+AGG | 0.501576 | 2_4:+26929942 | Msa0323250:CDS |
| GACGAGATAACAGTGGTATC+CGG | 0.506598 | 2_4:+26930268 | Msa0323250:CDS |
| ATATGATTAGTTTAGTTGAA+AGG | 0.511926 | 2_4:-26925694 | None:intergenic |
| AGTTCTACTGCATACCAAGA+AGG | 0.524545 | 2_4:+26930519 | Msa0323250:three_prime_UTR |
| TGCCTCGGTTGTTACTGTCA+TGG | 0.525886 | 2_4:+26925931 | Msa0323250:CDS |
| GATGGGATCGCGATGTAAGA+AGG | 0.529541 | 2_4:+26930123 | Msa0323250:intron |
| TTATGAAAATCATATGATAA+CGG | 0.534435 | 2_4:-26928825 | None:intergenic |
| TAAATATATGGTTAGAAGCA+TGG | 0.536505 | 2_4:+26928845 | Msa0323250:CDS |
| TAGAATCAACGATCGATGAG+AGG | 0.539794 | 2_4:+26930245 | Msa0323250:CDS |
| ATTCCAAAGGGACTGTATAG+TGG | 0.539888 | 2_4:+26927240 | Msa0323250:CDS |
| TCCATCACGCGTCTCATCCG+TGG | 0.543333 | 2_4:+26928354 | Msa0323250:CDS |
| TTAGAGATTCCTTACACAGT+TGG | 0.545309 | 2_4:+26930164 | Msa0323250:CDS |
| AAGGTCTTGAGCAGCTGCAC+CGG | 0.549157 | 2_4:+26927392 | Msa0323250:CDS |
| ACCTACATATTCAGTTGCCT+CGG | 0.550052 | 2_4:+26925916 | Msa0323250:CDS |
| AGCATGGAGGACGAATTTCA+TGG | 0.554354 | 2_4:+26928861 | Msa0323250:CDS |
| TAGTGCGAATTGATATGTAC+GGG | 0.554406 | 2_4:-26930406 | None:intergenic |
| TATGAATGAGGCCATTTCAA+AGG | 0.559827 | 2_4:-26929556 | None:intergenic |
| TCTCTGGAGAAAATTAAAGA+AGG | 0.561099 | 2_4:+26926654 | Msa0323250:CDS |
| TGCATCTTTGTGAACATCCA+TGG | 0.561195 | 2_4:+26929031 | Msa0323250:CDS |
| GGGAAGGTCTTGTTCAGCAC+AGG | 0.563562 | 2_4:-26927163 | None:intergenic |
| AATTATAATGGAACATGCTG+TGG | 0.564038 | 2_4:+26925868 | Msa0323250:exon |
| GATCTATAGTTGGTGCAGAT+GGG | 0.565228 | 2_4:+26928003 | Msa0323250:intron |
| AGAATCAACGATCGATGAGA+GGG | 0.566055 | 2_4:+26930246 | Msa0323250:CDS |
| AAAGCAGATGGGATCCAGAA+AGG | 0.568854 | 2_4:-26925762 | None:intergenic |
| GATGAAACTACTATTCCAAA+GGG | 0.569451 | 2_4:+26927228 | Msa0323250:CDS |
| CTTATCGATGGAAATTTGCA+AGG | 0.569789 | 2_4:+26928046 | Msa0323250:CDS |
| TGTTAGCACAAAGCGCAAGA+TGG | 0.570847 | 2_4:+26927091 | Msa0323250:CDS |
| ATGTACGGGTTCGGACAGAT+CGG | 0.573862 | 2_4:-26930392 | None:intergenic |
| GAATCCTATACTAATATGGA+TGG | 0.575461 | 2_4:+26928382 | Msa0323250:CDS |
| ATGGAACATGCTGTGGAGCA+AGG | 0.578849 | 2_4:+26925875 | Msa0323250:CDS |
| GGCCTCATTCATATGGACAT+TGG | 0.579307 | 2_4:+26929566 | Msa0323250:CDS |
| TACCAATGTCCATATGAATG+AGG | 0.584051 | 2_4:-26929568 | None:intergenic |
| GCTACGATGGCTCTTATCGA+TGG | 0.590315 | 2_4:+26928034 | Msa0323250:CDS |
| TGATCAAATCAAAAGTGAGT+AGG | 0.591418 | 2_4:+26925617 | None:intergenic |
| ATCATGACATGCTCAATCAT+GGG | 0.591999 | 2_4:-26927183 | None:intergenic |
| GTTTAGTTGAAAGGTGCATG+TGG | 0.594354 | 2_4:-26925685 | None:intergenic |
| CTTGAAATCTGGCAGCAGCA+GGG | 0.595998 | 2_4:+26929337 | Msa0323250:CDS |
| ACCGAATGATGATCATGTAA+TGG | 0.596192 | 2_4:-26929738 | None:intergenic |
| GTAGTGCGAATTGATATGTA+CGG | 0.599536 | 2_4:-26930407 | None:intergenic |
| AGTGGTTGAAGAAGACAAGA+AGG | 0.601038 | 2_4:+26926616 | Msa0323250:intron |
| AGATGAAACTACTATTCCAA+AGG | 0.604783 | 2_4:+26927227 | Msa0323250:CDS |
| ATGGGAAAATCAGGCTACGA+TGG | 0.609996 | 2_4:+26928021 | Msa0323250:CDS |
| AGTATAGGATTCCTGCTCCA+CGG | 0.621498 | 2_4:-26928371 | None:intergenic |
| TGAAAGGTGCATGTGGAGAG+AGG | 0.623118 | 2_4:-26925678 | None:intergenic |
| ACACAAGTAAAGCCGCGCGA+TGG | 0.629938 | 2_4:+26929373 | Msa0323250:CDS |
| TGACATGCTCAATCATGGGA+AGG | 0.634182 | 2_4:-26927179 | None:intergenic |
| GTTGAAGAAGACAAGAAGGA+AGG | 0.636202 | 2_4:+26926620 | Msa0323250:CDS |
| TGTTGGTTTAGCAATGAGCA+AGG | 0.642368 | 2_4:+26927462 | Msa0323250:CDS |
| AGTTGTTCGAGTTAGCGTGC+CGG | 0.646338 | 2_4:-26930287 | None:intergenic |
| TCCACGGATGAGACGCGTGA+TGG | 0.651042 | 2_4:-26928355 | None:intergenic |
| TGTGAAACTATTACATTCAG+GGG | 0.651741 | 2_4:-26929940 | None:intergenic |
| AGAACAACAAAGTGATGAGG+CGG | 0.652562 | 2_4:+26928315 | Msa0323250:CDS |
| CAATGTTGTCAACGTAGAGG+AGG | 0.653582 | 2_4:+26930432 | Msa0323250:CDS |
| TGAAACCAAGACGGAGTGCG+AGG | 0.667590 | 2_4:-26928668 | None:intergenic |
| GTAAGAACAACAAAGTGATG+AGG | 0.668841 | 2_4:+26928312 | Msa0323250:CDS |
| ACCGAGGCAACTGAATATGT+AGG | 0.669841 | 2_4:-26925917 | None:intergenic |
| TGCACTCCATCAATGTGGAG+AGG | 0.673997 | 2_4:+26927263 | Msa0323250:CDS |
| CAACAATGTTGTCAACGTAG+AGG | 0.682543 | 2_4:+26930429 | Msa0323250:CDS |
| TTACAGTGATGAAACCAAGA+CGG | 0.701613 | 2_4:-26928677 | None:intergenic |
| AGTGGTGCACTCCATCAATG+TGG | 0.709568 | 2_4:+26927258 | Msa0323250:CDS |
| GACCATGACAGTAACAACCG+AGG | 0.728387 | 2_4:-26925933 | None:intergenic |
| ACTATAGTATAAATCCAAAG+CGG | 0.728488 | 2_4:-26929007 | None:intergenic |
| AGACGCGTGATGGAAAACAA+AGG | 0.729624 | 2_4:-26928345 | None:intergenic |
| TGAGAGGGACGAGATAACAG+TGG | 0.741797 | 2_4:+26930261 | Msa0323250:CDS |
| ATATATGGTTAGAAGCATGG+AGG | 0.760811 | 2_4:+26928848 | Msa0323250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATAAAAGAATC+AGG | - | chr2_4:26926429-26926448 | None:intergenic | 10.0% |
| !!! | ATATGATTTTCATAAATATA+TGG | + | chr2_4:26928833-26928852 | Msa0323250:CDS | 10.0% |
| !!! | AAAAGTGTTTTTTTAATGAA+AGG | + | chr2_4:26925790-26925809 | Msa0323250:five_prime_UTR | 15.0% |
| !!! | TTTAATTGATTTTATTCTAC+AGG | + | chr2_4:26928290-26928309 | Msa0323250:intron | 15.0% |
| !! | TATAAAATATTATATCAGTG+AGG | - | chr2_4:26928754-26928773 | None:intergenic | 15.0% |
| !! | TTATGAAAATCATATGATAA+CGG | - | chr2_4:26928828-26928847 | None:intergenic | 15.0% |
| !!! | ATATGATTAGTTTAGTTGAA+AGG | - | chr2_4:26925697-26925716 | None:intergenic | 20.0% |
| !! | GATGTAAGAAGAAATTATAA+TGG | + | chr2_4:26925856-26925875 | Msa0323250:exon | 20.0% |
| !! | CAGTTTATTTGGTATATATT+TGG | - | chr2_4:26926102-26926121 | None:intergenic | 20.0% |
| !! | AATAACAAGCAAATAGTTAA+GGG | - | chr2_4:26926174-26926193 | None:intergenic | 20.0% |
| !! | AAATAACAAGCAAATAGTTA+AGG | - | chr2_4:26926175-26926194 | None:intergenic | 20.0% |
| !!! | TTATTTGTTATTTTGCTACT+TGG | + | chr2_4:26926189-26926208 | Msa0323250:intron | 20.0% |
| !!! | TGTTGAAATTGCTTTTTATT+TGG | + | chr2_4:26926229-26926248 | Msa0323250:intron | 20.0% |
| !! | CAAATTTATTACATTCTGAT+AGG | + | chr2_4:26926369-26926388 | Msa0323250:intron | 20.0% |
| !! | GTTAGTGTTTGATATTAATT+AGG | + | chr2_4:26926391-26926410 | Msa0323250:intron | 20.0% |
| !! | ATAAAAATAAAAGAATCAGG+AGG | - | chr2_4:26926426-26926445 | None:intergenic | 20.0% |
| !! | TTTATTGTTATACCTAAGAT+TGG | + | chr2_4:26927505-26927524 | Msa0323250:intron | 20.0% |
| !! | AAAATATGTAAGTATAAGGT+TGG | - | chr2_4:26928563-26928582 | None:intergenic | 20.0% |
| !!! | ACCTTATACTTACATATTTT+AGG | + | chr2_4:26928563-26928582 | Msa0323250:intron | 20.0% |
| !!! | CCTTATACTTACATATTTTA+GGG | + | chr2_4:26928564-26928583 | Msa0323250:intron | 20.0% |
| !! | TTATTATACATACAATTGCA+GGG | - | chr2_4:26929180-26929199 | None:intergenic | 20.0% |
| !! | ATTATTATACATACAATTGC+AGG | - | chr2_4:26929181-26929200 | None:intergenic | 20.0% |
| !!! | TTCTAAGAATTTCTTCATTT+TGG | - | chr2_4:26929226-26929245 | None:intergenic | 20.0% |
| !! | AAATTCTTAGAAAATCATGT+TGG | + | chr2_4:26929234-26929253 | Msa0323250:intron | 20.0% |
| !! | AAAAACCAGATATATTGTTA+TGG | + | chr2_4:26929410-26929429 | Msa0323250:CDS | 20.0% |
| !!! | TTTTGTTTACCTTTCCAAAA+CGG | - | chr2_4:26925991-26926010 | None:intergenic | 25.0% |
| !!! | TGCTTTTTATTTGGTATCTT+AGG | + | chr2_4:26926238-26926257 | Msa0323250:intron | 25.0% |
| ! | TTCTACTGTTCAAACTTATT+AGG | - | chr2_4:26926503-26926522 | None:intergenic | 25.0% |
| ! | ATTTAACTGTGAATGTAACT+TGG | + | chr2_4:26926522-26926541 | Msa0323250:intron | 25.0% |
| !!! | GAAACTACTAGTTGTTTTAT+TGG | - | chr2_4:26926549-26926568 | None:intergenic | 25.0% |
| !!! | GACATGAAACTTATTTTTCT+TGG | + | chr2_4:26926583-26926602 | Msa0323250:intron | 25.0% |
| !!! | TTTAGATCAAGTTTTATTGC+AGG | - | chr2_4:26926869-26926888 | None:intergenic | 25.0% |
| ! | ATGCTTCAATTGTAAAATGA+AGG | + | chr2_4:26927295-26927314 | Msa0323250:intron | 25.0% |
| ! | TCTTAGGTATAACAATAAAC+TGG | - | chr2_4:26927504-26927523 | None:intergenic | 25.0% |
| !! | ATGTAAGAGCATATTCAATA+AGG | + | chr2_4:26927537-26927556 | Msa0323250:intron | 25.0% |
| !! | TGTAAGAGCATATTCAATAA+GGG | + | chr2_4:26927538-26927557 | Msa0323250:intron | 25.0% |
| !! | TTCTTATATTTTCTACCCAA+TGG | + | chr2_4:26927597-26927616 | Msa0323250:intron | 25.0% |
| ! | TTTCATACACTACTATCAAT+TGG | - | chr2_4:26927819-26927838 | None:intergenic | 25.0% |
| ! | ATTACATTAGAAACAAACAG+TGG | - | chr2_4:26928160-26928179 | None:intergenic | 25.0% |
| !! | TTTTCATCATAATCACACTA+TGG | + | chr2_4:26928183-26928202 | Msa0323250:intron | 25.0% |
| ! | ATTACCATCCATATTAGTAT+AGG | - | chr2_4:26928389-26928408 | None:intergenic | 25.0% |
| ! | AAGCAGATTTAGAAGTAAAA+AGG | - | chr2_4:26928536-26928555 | None:intergenic | 25.0% |
| ! | CCCTAAAATATGTAAGTATA+AGG | - | chr2_4:26928567-26928586 | None:intergenic | 25.0% |
| ! | TCCTGAGAATTTAAAAAGTA+GGG | - | chr2_4:26928795-26928814 | None:intergenic | 25.0% |
| ! | TTCCTGAGAATTTAAAAAGT+AGG | - | chr2_4:26928796-26928815 | None:intergenic | 25.0% |
| ! | TAAATATATGGTTAGAAGCA+TGG | + | chr2_4:26928845-26928864 | Msa0323250:CDS | 25.0% |
| ! | AAAAACACTGCTATTCAAAA+GGG | - | chr2_4:26928909-26928928 | None:intergenic | 25.0% |
| ! | AAAAAACACTGCTATTCAAA+AGG | - | chr2_4:26928910-26928929 | None:intergenic | 25.0% |
| ! | ACTATAGTATAAATCCAAAG+CGG | - | chr2_4:26929010-26929029 | None:intergenic | 25.0% |
| ! | CACATGTTCTATTATGAAAA+AGG | - | chr2_4:26929064-26929083 | None:intergenic | 25.0% |
| ! | AATTGAGTTTCTAAATTTGC+AGG | + | chr2_4:26929124-26929143 | Msa0323250:intron | 25.0% |
| ! | TAAAAGCTTGTGATGTTAAT+AGG | + | chr2_4:26929280-26929299 | Msa0323250:intron | 25.0% |
| ! | ATGATCCATAACAATATATC+TGG | - | chr2_4:26929418-26929437 | None:intergenic | 25.0% |
| !! | GTGATATTTCAGGTAAAATA+TGG | + | chr2_4:26929445-26929464 | Msa0323250:intron | 25.0% |
| ! | AAAAAGGAAAATAACTGTGA+AGG | - | chr2_4:26929504-26929523 | None:intergenic | 25.0% |
| ! | TAGAGAAAATAAGGACAAAA+AGG | - | chr2_4:26929520-26929539 | None:intergenic | 25.0% |
| ! | CATGAACAATAGAGAAAATA+AGG | - | chr2_4:26929529-26929548 | None:intergenic | 25.0% |
| !!! | TTGAAAAGTATTGTGGAATA+TGG | - | chr2_4:26929838-26929857 | None:intergenic | 25.0% |
| !!! | TATGCAATTGAAAAGTATTG+TGG | - | chr2_4:26929845-26929864 | None:intergenic | 25.0% |
| ! | AATTATAATGGAACATGCTG+TGG | + | chr2_4:26925868-26925887 | Msa0323250:exon | 30.0% |
| TTCTCTATACTGTGAATGTT+TGG | + | chr2_4:26926025-26926044 | Msa0323250:intron | 30.0% | |
| AAAGTGAGAGACAGTTTATT+TGG | - | chr2_4:26926113-26926132 | None:intergenic | 30.0% | |
| CTCTCACTTTAGTATAAACT+TGG | + | chr2_4:26926123-26926142 | Msa0323250:intron | 30.0% | |
| CACTTTAGTATAAACTTGGA+AGG | + | chr2_4:26926127-26926146 | Msa0323250:intron | 30.0% | |
| AGGGATGTATAATTGTTCAA+AGG | - | chr2_4:26926155-26926174 | None:intergenic | 30.0% | |
| ! | TAGGAACATGTCATTACTTT+TGG | - | chr2_4:26926328-26926347 | None:intergenic | 30.0% |
| !! | ATTTTAGCCTCTAGATTTGT+TGG | + | chr2_4:26926456-26926475 | Msa0323250:intron | 30.0% |
| GTAGTTTCTTAAATCTCATG+AGG | + | chr2_4:26926561-26926580 | Msa0323250:intron | 30.0% | |
| ! | TCTCTGGAGAAAATTAAAGA+AGG | + | chr2_4:26926654-26926673 | Msa0323250:CDS | 30.0% |
| AGCTCAAAAACACAGAATTA+AGG | + | chr2_4:26926704-26926723 | Msa0323250:intron | 30.0% | |
| TGATTATTGAATGTTCACAC+TGG | - | chr2_4:26926942-26926961 | None:intergenic | 30.0% | |
| TCTGATGGAAAACTGAAATA+AGG | - | chr2_4:26926973-26926992 | None:intergenic | 30.0% | |
| AGATGAAACTACTATTCCAA+AGG | + | chr2_4:26927227-26927246 | Msa0323250:CDS | 30.0% | |
| GATGAAACTACTATTCCAAA+GGG | + | chr2_4:26927228-26927247 | Msa0323250:CDS | 30.0% | |
| !! | ATTAAATGCTGTTTCTTTGC+AGG | + | chr2_4:26927345-26927364 | Msa0323250:intron | 30.0% |
| !! | TTAAATGCTGTTTCTTTGCA+GGG | + | chr2_4:26927346-26927365 | Msa0323250:intron | 30.0% |
| GAACCATTTGTTTCATATGA+AGG | + | chr2_4:26927373-26927392 | Msa0323250:CDS | 30.0% | |
| AGACCTTCATATGAAACAAA+TGG | - | chr2_4:26927379-26927398 | None:intergenic | 30.0% | |
| ! | TTATATTTTCTACCCAATGG+AGG | + | chr2_4:26927600-26927619 | Msa0323250:intron | 30.0% |
| GAAGTAGCTTAATTAAGCAA+TGG | + | chr2_4:26927660-26927679 | Msa0323250:intron | 30.0% | |
| ATAAGTATGATGTGACATTG+TGG | + | chr2_4:26927790-26927809 | Msa0323250:intron | 30.0% | |
| TGTGTTTGTAGATCTATAGT+TGG | + | chr2_4:26927993-26928012 | Msa0323250:intron | 30.0% | |
| ACAAAATTCTAACAGTACCA+AGG | - | chr2_4:26928115-26928134 | None:intergenic | 30.0% | |
| GAATCCTATACTAATATGGA+TGG | + | chr2_4:26928382-26928401 | Msa0323250:CDS | 30.0% | |
| TGCTTGCAAAACAATAAGTA+AGG | - | chr2_4:26928440-26928459 | None:intergenic | 30.0% | |
| AGGAAGAAGAAATCAAAAGA+CGG | - | chr2_4:26928734-26928753 | None:intergenic | 30.0% | |
| !!! | TCCCTACTTTTTAAATTCTC+AGG | + | chr2_4:26928791-26928810 | Msa0323250:intron | 30.0% |
| ATGAAAAAGGAAAGTTACCA+TGG | - | chr2_4:26929051-26929070 | None:intergenic | 30.0% | |
| CATACAGTTTGTGATATTTC+AGG | + | chr2_4:26929435-26929454 | Msa0323250:CDS | 30.0% | |
| GCAAGTAATGAAACAAATGT+AGG | - | chr2_4:26929624-26929643 | None:intergenic | 30.0% | |
| TACTTGCATTAATCTGCTTA+AGG | + | chr2_4:26929637-26929656 | Msa0323250:intron | 30.0% | |
| ACCATTACATGATCATCATT+CGG | + | chr2_4:26929737-26929756 | Msa0323250:CDS | 30.0% | |
| TGTGAAACTATTACATTCAG+GGG | - | chr2_4:26929943-26929962 | None:intergenic | 30.0% | |
| CTGTGAAACTATTACATTCA+GGG | - | chr2_4:26929944-26929963 | None:intergenic | 30.0% | |
| ATTCAAAGACTCTAAGTCTA+AGG | - | chr2_4:26930314-26930333 | None:intergenic | 30.0% | |
| GATTGTTAGAAAAATTCAGC+TGG | - | chr2_4:26930360-26930379 | None:intergenic | 30.0% | |
| TACTCTATAGAATTCCTTCT+TGG | - | chr2_4:26930536-26930555 | None:intergenic | 30.0% | |
| ! | GATACTTCTCTTTTCCTTTC+TGG | + | chr2_4:26925748-26925767 | Msa0323250:five_prime_UTR | 35.0% |
| !! | ACTTTTGACTCAAAGCAGAT+GGG | - | chr2_4:26925776-26925795 | None:intergenic | 35.0% |
| !!! | TTCTATCTACCGTTTTGGAA+AGG | + | chr2_4:26925979-26925998 | Msa0323250:CDS | 35.0% |
| CTATACTGTGAATGTTTGGT+TGG | + | chr2_4:26926029-26926048 | Msa0323250:intron | 35.0% | |
| AGCAGATACATAGAGAACAT+AGG | - | chr2_4:26926347-26926366 | None:intergenic | 35.0% | |
| TATGTTCTCTATGTATCTGC+TGG | + | chr2_4:26926346-26926365 | Msa0323250:intron | 35.0% | |
| !! | TTCTGTGTTTTTGAGCTAGT+TGG | - | chr2_4:26926701-26926720 | None:intergenic | 35.0% |
| AACACAGAATTAAGGACACT+AGG | + | chr2_4:26926712-26926731 | Msa0323250:intron | 35.0% | |
| ACACAGAATTAAGGACACTA+GGG | + | chr2_4:26926713-26926732 | Msa0323250:intron | 35.0% | |
| ! | AAGTTAGCAGTGTCTAAGAT+TGG | + | chr2_4:26926831-26926850 | Msa0323250:intron | 35.0% |
| ! | CAGTTTTCCATCAGAATCTT+TGG | + | chr2_4:26926978-26926997 | Msa0323250:intron | 35.0% |
| AAAGTTGCCAAAGATTCTGA+TGG | - | chr2_4:26926988-26927007 | None:intergenic | 35.0% | |
| ATCATGACATGCTCAATCAT+GGG | - | chr2_4:26927186-26927205 | None:intergenic | 35.0% | |
| AATCATGACATGCTCAATCA+TGG | - | chr2_4:26927187-26927206 | None:intergenic | 35.0% | |
| !!! | CACCGGTTTTTATTTGTTCT+CGG | + | chr2_4:26927409-26927428 | Msa0323250:CDS | 35.0% |
| !! | ACCGGTTTTTATTTGTTCTC+GGG | + | chr2_4:26927410-26927429 | Msa0323250:CDS | 35.0% |
| TCCCGAGAACAAATAAAAAC+CGG | - | chr2_4:26927414-26927433 | None:intergenic | 35.0% | |
| CATGAACATTGACCAATCTT+AGG | - | chr2_4:26927520-26927539 | None:intergenic | 35.0% | |
| ! | AGTACTTAGAGCATCTCTAA+TGG | - | chr2_4:26927868-26927887 | None:intergenic | 35.0% |
| CTGCTTACTTAACATAGGAA+AGG | - | chr2_4:26927952-26927971 | None:intergenic | 35.0% | |
| TTCCTATGTTAAGTAAGCAG+TGG | + | chr2_4:26927952-26927971 | Msa0323250:intron | 35.0% | |
| AACCACTGCTTACTTAACAT+AGG | - | chr2_4:26927957-26927976 | None:intergenic | 35.0% | |
| CTTATCGATGGAAATTTGCA+AGG | + | chr2_4:26928046-26928065 | Msa0323250:CDS | 35.0% | |
| AATTCTAACAGTACCAAGGT+TGG | - | chr2_4:26928111-26928130 | None:intergenic | 35.0% | |
| ! | AGAATTTTGTCAATGCCTGA+AGG | + | chr2_4:26928125-26928144 | Msa0323250:intron | 35.0% |
| ! | GAATTTTGTCAATGCCTGAA+GGG | + | chr2_4:26928126-26928145 | Msa0323250:intron | 35.0% |
| GTAAGAACAACAAAGTGATG+AGG | + | chr2_4:26928312-26928331 | Msa0323250:CDS | 35.0% | |
| GCAGGAATCCTATACTAATA+TGG | + | chr2_4:26928378-26928397 | Msa0323250:CDS | 35.0% | |
| ! | TATGTTTTCTGCGTCAGTTT+AGG | + | chr2_4:26928622-26928641 | Msa0323250:CDS | 35.0% |
| TTACAGTGATGAAACCAAGA+CGG | - | chr2_4:26928680-26928699 | None:intergenic | 35.0% | |
| ! | ATATATGGTTAGAAGCATGG+AGG | + | chr2_4:26928848-26928867 | Msa0323250:CDS | 35.0% |
| ! | TTCATGGCATTCTAGGAATA+AGG | + | chr2_4:26928877-26928896 | Msa0323250:CDS | 35.0% |
| CAGGTCTGAATATATACTTC+TGG | + | chr2_4:26929143-26929162 | Msa0323250:intron | 35.0% | |
| ACATACAATTGCAGGGATAA+AGG | - | chr2_4:26929173-26929192 | None:intergenic | 35.0% | |
| TTTACTTGTGTTCTTGCACT+TGG | - | chr2_4:26929364-26929383 | None:intergenic | 35.0% | |
| TATGAATGAGGCCATTTCAA+AGG | - | chr2_4:26929559-26929578 | None:intergenic | 35.0% | |
| TTGAAATGGCCTCATTCATA+TGG | + | chr2_4:26929559-26929578 | Msa0323250:CDS | 35.0% | |
| TACCAATGTCCATATGAATG+AGG | - | chr2_4:26929571-26929590 | None:intergenic | 35.0% | |
| TCTTGTATGTCTATGTCTAG+TGG | + | chr2_4:26929683-26929702 | Msa0323250:intron | 35.0% | |
| CTTGTATGTCTATGTCTAGT+GGG | + | chr2_4:26929684-26929703 | Msa0323250:intron | 35.0% | |
| TTGTATGTCTATGTCTAGTG+GGG | + | chr2_4:26929685-26929704 | Msa0323250:intron | 35.0% | |
| ACCGAATGATGATCATGTAA+TGG | - | chr2_4:26929741-26929760 | None:intergenic | 35.0% | |
| CCTGTGAAACTATTACATTC+AGG | - | chr2_4:26929945-26929964 | None:intergenic | 35.0% | |
| CCTGAATGTAATAGTTTCAC+AGG | + | chr2_4:26929942-26929961 | Msa0323250:CDS | 35.0% | |
| ! | TCACTCTTGTTTACTACAGA+TGG | + | chr2_4:26930105-26930124 | Msa0323250:intron | 35.0% |
| ! | CACTCTTGTTTACTACAGAT+GGG | + | chr2_4:26930106-26930125 | Msa0323250:intron | 35.0% |
| TTAGAGATTCCTTACACAGT+TGG | + | chr2_4:26930164-26930183 | Msa0323250:CDS | 35.0% | |
| TAGTGCGAATTGATATGTAC+GGG | - | chr2_4:26930409-26930428 | None:intergenic | 35.0% | |
| GTAGTGCGAATTGATATGTA+CGG | - | chr2_4:26930410-26930429 | None:intergenic | 35.0% | |
| ! | GTTTAGTTGAAAGGTGCATG+TGG | - | chr2_4:26925688-26925707 | None:intergenic | 40.0% |
| !! | CACTTTTGACTCAAAGCAGA+TGG | - | chr2_4:26925777-26925796 | None:intergenic | 40.0% |
| ACCTACATATTCAGTTGCCT+CGG | + | chr2_4:26925916-26925935 | Msa0323250:CDS | 40.0% | |
| ! | ATGTTTGGTTGGTATCACGA+TGG | + | chr2_4:26926040-26926059 | Msa0323250:intron | 40.0% |
| !! | CGATGGATTGGATAAAATCG+CGG | + | chr2_4:26926057-26926076 | Msa0323250:intron | 40.0% |
| TAAAAGAATCAGGAGGATGC+TGG | - | chr2_4:26926419-26926438 | None:intergenic | 40.0% | |
| ! | TGACTAGCCAACAAATCTAG+AGG | - | chr2_4:26926466-26926485 | None:intergenic | 40.0% |
| AGTGGTTGAAGAAGACAAGA+AGG | + | chr2_4:26926616-26926635 | Msa0323250:intron | 40.0% | |
| GTTGAAGAAGACAAGAAGGA+AGG | + | chr2_4:26926620-26926639 | Msa0323250:CDS | 40.0% | |
| !! | GTGTTTTTGAGCTAGTTGGT+AGG | - | chr2_4:26926697-26926716 | None:intergenic | 40.0% |
| TAAGGACACTAGGGTGATTA+TGG | + | chr2_4:26926722-26926741 | Msa0323250:intron | 40.0% | |
| CTCAAGCACATAAAGCATAG+TGG | - | chr2_4:26926750-26926769 | None:intergenic | 40.0% | |
| TGAGTGAAGATTAGAGAGTG+AGG | + | chr2_4:26926792-26926811 | Msa0323250:intron | 40.0% | |
| !!! | GACACTGCTAACTTTTTCAG+TGG | - | chr2_4:26926825-26926844 | None:intergenic | 40.0% |
| CAGCATCAACTCTATCAACA+AGG | - | chr2_4:26927052-26927071 | None:intergenic | 40.0% | |
| !! | TTGATAGAGTTGATGCTGCT+TGG | + | chr2_4:26927054-26927073 | Msa0323250:intron | 40.0% |
| !! | TGATAGAGTTGATGCTGCTT+GGG | + | chr2_4:26927055-26927074 | Msa0323250:intron | 40.0% |
| ATTCCAAAGGGACTGTATAG+TGG | + | chr2_4:26927240-26927259 | Msa0323250:CDS | 40.0% | |
| ATGTTACCTCTCCACATTGA+TGG | - | chr2_4:26927272-26927291 | None:intergenic | 40.0% | |
| !! | TGTTGGTTTAGCAATGAGCA+AGG | + | chr2_4:26927462-26927481 | Msa0323250:CDS | 40.0% |
| !!! | GCAGTGGTTTAGTTTTTCTG+TGG | + | chr2_4:26927968-26927987 | Msa0323250:intron | 40.0% |
| ! | AGATCTATAGTTGGTGCAGA+TGG | + | chr2_4:26928002-26928021 | Msa0323250:intron | 40.0% |
| ! | GATCTATAGTTGGTGCAGAT+GGG | + | chr2_4:26928003-26928022 | Msa0323250:intron | 40.0% |
| ! | TTCATTGATGACACCAACCT+TGG | + | chr2_4:26928095-26928114 | Msa0323250:intron | 40.0% |
| ! | CAGTGGAAATTTTTCCCTTC+AGG | - | chr2_4:26928143-26928162 | None:intergenic | 40.0% |
| ACTAAGTTTGATCGGCTACA+TGG | - | chr2_4:26928220-26928239 | None:intergenic | 40.0% | |
| ATGTAGCCGATCAAACTTAG+TGG | + | chr2_4:26928219-26928238 | Msa0323250:intron | 40.0% | |
| TGTAGCCGATCAAACTTAGT+GGG | + | chr2_4:26928220-26928239 | Msa0323250:intron | 40.0% | |
| CCTATCCCACTAAGTTTGAT+CGG | - | chr2_4:26928228-26928247 | None:intergenic | 40.0% | |
| CGATCAAACTTAGTGGGATA+GGG | + | chr2_4:26928226-26928245 | Msa0323250:intron | 40.0% | |
| AGAACAACAAAGTGATGAGG+CGG | + | chr2_4:26928315-26928334 | Msa0323250:CDS | 40.0% | |
| GAAAACATAGCTGCAATGCA+AGG | - | chr2_4:26928611-26928630 | None:intergenic | 40.0% | |
| GACGAATTTCATGGCATTCT+AGG | + | chr2_4:26928870-26928889 | Msa0323250:CDS | 40.0% | |
| TGCATCTTTGTGAACATCCA+TGG | + | chr2_4:26929031-26929050 | Msa0323250:CDS | 40.0% | |
| CCAGATTTCAAGCGCTAAAA+TGG | - | chr2_4:26929329-26929348 | None:intergenic | 40.0% | |
| !! | CCATTTTAGCGCTTGAAATC+TGG | + | chr2_4:26929326-26929345 | Msa0323250:intron | 40.0% |
| ! | CATGCAGAATGCCTTTGAAA+TGG | + | chr2_4:26929545-26929564 | Msa0323250:intron | 40.0% |
| ATCATCATTCGGTTGACATC+TGG | + | chr2_4:26929748-26929767 | Msa0323250:CDS | 40.0% | |
| TCATCATTCGGTTGACATCT+GGG | + | chr2_4:26929749-26929768 | Msa0323250:CDS | 40.0% | |
| TCTCTTACACCAACTGTGTA+AGG | - | chr2_4:26930176-26930195 | None:intergenic | 40.0% | |
| !! | CTCATCGATCGTTGATTCTA+GGG | - | chr2_4:26930245-26930264 | None:intergenic | 40.0% |
| !! | TCTCATCGATCGTTGATTCT+AGG | - | chr2_4:26930246-26930265 | None:intergenic | 40.0% |
| TAGAATCAACGATCGATGAG+AGG | + | chr2_4:26930245-26930264 | Msa0323250:CDS | 40.0% | |
| AGAATCAACGATCGATGAGA+GGG | + | chr2_4:26930246-26930265 | Msa0323250:CDS | 40.0% | |
| CGAATTGATATGTACGGGTT+CGG | - | chr2_4:26930404-26930423 | None:intergenic | 40.0% | |
| CAACAATGTTGTCAACGTAG+AGG | + | chr2_4:26930429-26930448 | Msa0323250:CDS | 40.0% | |
| AGTTCTACTGCATACCAAGA+AGG | + | chr2_4:26930519-26930538 | Msa0323250:three_prime_UTR | 40.0% | |
| AAAGCAGATGGGATCCAGAA+AGG | - | chr2_4:26925765-26925784 | None:intergenic | 45.0% | |
| ACCGAGGCAACTGAATATGT+AGG | - | chr2_4:26925920-26925939 | None:intergenic | 45.0% | |
| CATGGTCTTTGTCTGCTTCT+TGG | + | chr2_4:26925949-26925968 | Msa0323250:CDS | 45.0% | |
| ! | GAGCGTTCTATCTACCGTTT+TGG | + | chr2_4:26925974-26925993 | Msa0323250:CDS | 45.0% |
| ! | TGGTTGGTATCACGATGGAT+TGG | + | chr2_4:26926045-26926064 | Msa0323250:intron | 45.0% |
| ! | TGGATTGGATAAAATCGCGG+TGG | + | chr2_4:26926060-26926079 | Msa0323250:intron | 45.0% |
| ! | TGCTACTTGGCATGAGAGAA+TGG | + | chr2_4:26926202-26926221 | Msa0323250:intron | 45.0% |
| TTTCTTGGCTATGCATGCAG+TGG | + | chr2_4:26926598-26926617 | Msa0323250:intron | 45.0% | |
| !!! | GAAGGCACTTTTTGCTTCTC+TGG | + | chr2_4:26926638-26926657 | Msa0323250:CDS | 45.0% |
| TGTTAGCACAAAGCGCAAGA+TGG | + | chr2_4:26927091-26927110 | Msa0323250:CDS | 45.0% | |
| TGACATGCTCAATCATGGGA+AGG | - | chr2_4:26927182-26927201 | None:intergenic | 45.0% | |
| CTGTATAGTTGTCTCGCTGT+TGG | + | chr2_4:26927445-26927464 | Msa0323250:CDS | 45.0% | |
| ACACCTCAAGTTCCTCCATT+GGG | - | chr2_4:26927615-26927634 | None:intergenic | 45.0% | |
| TTGGTGCAGATGGGAAAATC+AGG | + | chr2_4:26928012-26928031 | Msa0323250:CDS | 45.0% | |
| ATGGGAAAATCAGGCTACGA+TGG | + | chr2_4:26928021-26928040 | Msa0323250:CDS | 45.0% | |
| CCGATCAAACTTAGTGGGAT+AGG | + | chr2_4:26928225-26928244 | Msa0323250:intron | 45.0% | |
| AAACTTAGTGGGATAGGGCT+TGG | + | chr2_4:26928231-26928250 | Msa0323250:intron | 45.0% | |
| ! | AGACGCGTGATGGAAAACAA+AGG | - | chr2_4:26928348-26928367 | None:intergenic | 45.0% |
| AGTATAGGATTCCTGCTCCA+CGG | - | chr2_4:26928374-26928393 | None:intergenic | 45.0% | |
| AGCATGGAGGACGAATTTCA+TGG | + | chr2_4:26928861-26928880 | Msa0323250:CDS | 45.0% | |
| AACCAAAAAAGACCATCGCG+CGG | - | chr2_4:26929388-26929407 | None:intergenic | 45.0% | |
| GGCCTCATTCATATGGACAT+TGG | + | chr2_4:26929566-26929585 | Msa0323250:CDS | 45.0% | |
| GAACAAGAACACTGCAATGC+AGG | - | chr2_4:26929894-26929913 | None:intergenic | 45.0% | |
| GCAGTGTTCTTGTTCAGTTC+TGG | + | chr2_4:26929899-26929918 | Msa0323250:intron | 45.0% | |
| GACGAGATAACAGTGGTATC+CGG | + | chr2_4:26930268-26930287 | Msa0323250:CDS | 45.0% | |
| CAATGTTGTCAACGTAGAGG+AGG | + | chr2_4:26930432-26930451 | Msa0323250:CDS | 45.0% | |
| !! | TTTATTATATATAATTAACT+TGG | + | chr2_4:26927020-26927039 | Msa0323250:intron | 5.0% |
| ! | TGAAAGGTGCATGTGGAGAG+AGG | - | chr2_4:26925681-26925700 | None:intergenic | 50.0% |
| ATGGAACATGCTGTGGAGCA+AGG | + | chr2_4:26925875-26925894 | Msa0323250:CDS | 50.0% | |
| TGCCTCGGTTGTTACTGTCA+TGG | + | chr2_4:26925931-26925950 | Msa0323250:CDS | 50.0% | |
| GACCATGACAGTAACAACCG+AGG | - | chr2_4:26925936-26925955 | None:intergenic | 50.0% | |
| TGGATAAAATCGCGGTGGCA+CGG | + | chr2_4:26926065-26926084 | Msa0323250:intron | 50.0% | |
| GCACCACTATACAGTCCCTT+TGG | - | chr2_4:26927246-26927265 | None:intergenic | 50.0% | |
| AGTGGTGCACTCCATCAATG+TGG | + | chr2_4:26927258-26927277 | Msa0323250:CDS | 50.0% | |
| TGCACTCCATCAATGTGGAG+AGG | + | chr2_4:26927263-26927282 | Msa0323250:CDS | 50.0% | |
| CTACCCAATGGAGGAACTTG+AGG | + | chr2_4:26927609-26927628 | Msa0323250:intron | 50.0% | |
| GACACCTCAAGTTCCTCCAT+TGG | - | chr2_4:26927616-26927635 | None:intergenic | 50.0% | |
| GCTACGATGGCTCTTATCGA+TGG | + | chr2_4:26928034-26928053 | Msa0323250:CDS | 50.0% | |
| ACCTCCTTGAACTTTGCAGC+TGG | + | chr2_4:26928984-26929003 | Msa0323250:intron | 50.0% | |
| CTTGAAATCTGGCAGCAGCA+GGG | + | chr2_4:26929337-26929356 | Msa0323250:CDS | 50.0% | |
| GATGGGATCGCGATGTAAGA+AGG | + | chr2_4:26930123-26930142 | Msa0323250:intron | 50.0% | |
| TGAGAGGGACGAGATAACAG+TGG | + | chr2_4:26930261-26930280 | Msa0323250:CDS | 50.0% | |
| ! | AGTTGTTCGAGTTAGCGTGC+CGG | - | chr2_4:26930290-26930309 | None:intergenic | 50.0% |
| ATGTACGGGTTCGGACAGAT+CGG | - | chr2_4:26930395-26930414 | None:intergenic | 50.0% | |
| ATAAAATCGCGGTGGCACGG+TGG | + | chr2_4:26926068-26926087 | Msa0323250:intron | 55.0% | |
| !! | GGGAAGGTCTTGTTCAGCAC+AGG | - | chr2_4:26927166-26927185 | None:intergenic | 55.0% |
| AAGGTCTTGAGCAGCTGCAC+CGG | + | chr2_4:26927392-26927411 | Msa0323250:CDS | 55.0% | |
| GATTACCTCGCACTCCGTCT+TGG | + | chr2_4:26928663-26928682 | Msa0323250:CDS | 55.0% | |
| TGAAACCAAGACGGAGTGCG+AGG | - | chr2_4:26928671-26928690 | None:intergenic | 55.0% | |
| GCCAGCTGCAAAGTTCAAGG+AGG | - | chr2_4:26928988-26929007 | None:intergenic | 55.0% | |
| AACTTTGCAGCTGGCCGCTT+TGG | + | chr2_4:26928993-26929012 | Msa0323250:intron | 55.0% | |
| GCTTGAAATCTGGCAGCAGC+AGG | + | chr2_4:26929336-26929355 | Msa0323250:CDS | 55.0% | |
| ACACAAGTAAAGCCGCGCGA+TGG | + | chr2_4:26929373-26929392 | Msa0323250:CDS | 55.0% | |
| !!! | AGCCGCGCGATGGTCTTTTT+TGG | + | chr2_4:26929383-26929402 | Msa0323250:CDS | 55.0% |
| TCCATCACGCGTCTCATCCG+TGG | + | chr2_4:26928354-26928373 | Msa0323250:CDS | 60.0% | |
| TCCACGGATGAGACGCGTGA+TGG | - | chr2_4:26928358-26928377 | None:intergenic | 60.0% | |
| GCGGCCAGCTGCAAAGTTCA+AGG | - | chr2_4:26928991-26929010 | None:intergenic | 60.0% | |
| ACGCGTCTCATCCGTGGAGC+AGG | + | chr2_4:26928360-26928379 | Msa0323250:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 26925628 | 26930601 | 26925628 | ID=Msa0323250;Name=Msa0323250 |
| chr2_4 | mRNA | 26925628 | 26930601 | 26925628 | ID=Msa0323250-mRNA-1;Parent=Msa0323250;Name=Msa0323250-mRNA-1;_AED=0.12;_eAED=0.12;_QI=247|0.92|0.92|1|1|1|14|106|516 |
| chr2_4 | exon | 26925628 | 26926000 | 26925628 | ID=Msa0323250-mRNA-1:exon:9382;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26926618 | 26926675 | 26926618 | ID=Msa0323250-mRNA-1:exon:9383;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26927061 | 26927284 | 26927061 | ID=Msa0323250-mRNA-1:exon:9384;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26927367 | 26927483 | 26927367 | ID=Msa0323250-mRNA-1:exon:9385;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26928004 | 26928067 | 26928004 | ID=Msa0323250-mRNA-1:exon:9386;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26928312 | 26928403 | 26928312 | ID=Msa0323250-mRNA-1:exon:9387;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26928621 | 26928695 | 26928621 | ID=Msa0323250-mRNA-1:exon:9388;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26928813 | 26928898 | 26928813 | ID=Msa0323250-mRNA-1:exon:9389;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26929003 | 26929052 | 26929003 | ID=Msa0323250-mRNA-1:exon:9390;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26929335 | 26929456 | 26929335 | ID=Msa0323250-mRNA-1:exon:9391;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26929552 | 26929587 | 26929552 | ID=Msa0323250-mRNA-1:exon:9392;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26929703 | 26929770 | 26929703 | ID=Msa0323250-mRNA-1:exon:9393;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26929903 | 26929963 | 26929903 | ID=Msa0323250-mRNA-1:exon:9394;Parent=Msa0323250-mRNA-1 |
| chr2_4 | exon | 26930124 | 26930601 | 26930124 | ID=Msa0323250-mRNA-1:exon:9395;Parent=Msa0323250-mRNA-1 |
| chr2_4 | five_prime_UTR | 26925628 | 26925874 | 26925628 | ID=Msa0323250-mRNA-1:five_prime_utr;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26925875 | 26926000 | 26925875 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26926618 | 26926675 | 26926618 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26927061 | 26927284 | 26927061 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26927367 | 26927483 | 26927367 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26928004 | 26928067 | 26928004 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26928312 | 26928403 | 26928312 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26928621 | 26928695 | 26928621 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26928813 | 26928898 | 26928813 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26929003 | 26929052 | 26929003 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26929335 | 26929456 | 26929335 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26929552 | 26929587 | 26929552 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26929703 | 26929770 | 26929703 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26929903 | 26929963 | 26929903 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | CDS | 26930124 | 26930495 | 26930124 | ID=Msa0323250-mRNA-1:cds;Parent=Msa0323250-mRNA-1 |
| chr2_4 | three_prime_UTR | 26930496 | 26930601 | 26930496 | ID=Msa0323250-mRNA-1:three_prime_utr;Parent=Msa0323250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
